BLAST output

CMW022C (500 aa)
by blastp 2.2.20 [Feb-08-2009] against nr [Jan-30-2013] (XML result)


		NADH dehydrogenase subunit 2 [Cyanidioschyzon merolae]
		NADH dehydrogenase subunit 2 (mitochondrion) [Gracilariopsis lemaneiformis]
		nad2 gene product (mitochondrion) [Gracilariophila oryzoides]
		NADH dehydrogenase subunit 2 [Nephroselmis olivacea]
		NADH dehydrogenase subunit 2 (mitochondrion) [Porphyra umbilicalis]
		NADH dehydrogenase subunit 2 [Chondrus crispus]
		NADH dehydrogenase subunit 2 [Chlorokybus atmophyticus]
		nad2 gene product (mitochondrion) [Gracilariopsis andersonii]
		NADH dehydrogenase subunit 2 (Partial), partial [Bathycoccus prasinos]
		NADH dehydrogenase subunit 2 [Micromonas sp. RCC299]
		NADH dehydrogenase subunit 2 [Reclinomonas americana]
		NADH dehydrogenase subunit 2 [Physcomitrella patens]
		NADH dehydrogenase subunit 2 (mitochondrion) [Anomodon rugelii]
		NADH dehydrogenase (ubiquinone), subunit 2 [Prototheca wickerhamii]
		NADH dehydrogenase subunit 2 [Funaria hygrometrica]
		NADH dehydrogenase subunit 2 (mitochondrion) [Pyropia haitanensis]
		NADH dehydrogenase subunit 2 [Marchantia polymorpha]
		NADH dehydrogenase subunit 2 [Micromonas pusilla CCMP1545]
		nad2 gene product (mitochondrion) [Huperzia squarrosa]
		nad2 [Ostreococcus tauri]
		nad2 gene product (mitochondrion) [Helicosporidium sp. ex Simulium jonesi]
		NADH dehydrogenase subunit 2 (mitochondrion) [Pleurozia purpurea]
		nad2 gene product (mitochondrion) [Nitella hyalina]
		NADH dehydrogenase subunit 2 [Isoetes engelmannii]
		NADH dehydrogenase subunit 2 [Trebouxia aggregata]
		nad2 gene product (mitochondrion) [Pyropia yezoensis]
		NADH dehydrogenase subunit 2 [Chara vulgaris]
		NADH dehydrogenase subunit 2 [Silene noctiflora]
		NADH dehydrogenase subunit 2 [Porphyra purpurea]
		NADH dehydrogenase subunit 2 [Silene latifolia]
		RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName: Full=NADH dehydrogenase subunit 2
		NADH dehydrogenase subunit 2 [Brassica napus]
		NADH dehydrogenase subunit 2 (mitochondrion) [Beta vulgaris subsp. maritima]
		nad2 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
		NADH dehydrogenase subunit 2 [Citrullus lanatus]
		NADH dehydrogenase subunit 2 [Cucurbita pepo]
		NADH dehydrogenase subunit 2 (mitochondrion) [Nicotiana tabacum]
		NADH dehydrogenase subunit 2 [Megaceros aenigmaticus]
		NADH dehydrogenase subunit 2 (mitochondrion) [Silene conica]
		NADH dehydrogenase subunit 2 [Triticum aestivum]
		NADH dehydrogenase subunit 2 (mitochondrion) [Millettia pinnata]
		RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName: Full=NADH dehydrogenase subunit 2
		NADH dehydrogenase subunit 2 (mitochondrion) [Lotus japonicus]
		NADH dehydrogenase subunit 2 [Coccomyxa subellipsoidea C-169]
		Proton-translocating NADH-quinone oxidoreductase, chain N [alpha proteobacterium BAL199]
		NADH dehydrogenase subunit 2 (mitochondrion) [Nannochloropsis gaditana]
		NADH dehydrogenase subunit 2 [Silene latifolia]
		NADH-ubiquinone oxidoreductase chain N [Caenispirillum salinarum AK4]
		NADH dehydrogenase subunit 2 (mitochondrion) [Silene noctiflora]
		NADH dehydrogenase subunit 2 [Ricciocarpos natans]
		NADH dehydrogenase subunit 2 [Plocamiocolax pulvinata]
		NADH dehydrogenase subunit N [Rhodospirillum centenum SW]
		NADH dehydrogenase subunit 2 (mitochondrion) [Mimulus guttatus]
		NADH dehydrogenase subunit 2 [Cucumis sativus]
		NADH dehydrogenase subunit 2 [Sphaerocarpos donnellii]
		NADH dehydrogenase subunit 2 [Sphagnum fallax]
		NADH dehydrogenase subunit 2 [Proteromonas lacertae]
		NADH dehydrogenase subunit 2 [Fissidens cristatus]
		NADH dehydrogenase subunit 2 [Dichodontium pellucidum]
		NADH dehydrogenase subunit 2 [Glaucocystis nostochinearum]
		NADH dehydrogenase subunit 2 [Corsinia coriandra]
		NADH dehydrogenase subunit 2 [Physcomitrella patens]
		NADH dehydrogenase subunit 2 [Pogonatum urnigerum]
		NADH dehydrogenase subunit 2 [Oedipodiella australis]
		NADH dehydrogenase subunit 2 [Dawsonia sp. VKL981115]
		NADH dehydrogenase subunit 2 [Ditrichum cylindricum]
		nad2 (mitochondrion) [Brassica carinata]
		NADH dehydrogenase subunit 2 [Ulota crispa]
		NADH dehydrogenase subunit 2 [Cinclidotus riparius]
		NADH dehydrogenase subunit 2 [Chaetosphaeridium globosum]
		NADH dehydrogenase subunit 2 [Physcomitrium pyriforme]
		nad2 (mitochondrion) [Brassica oleracea]
		NADH dehydrogenase subunit 2 [Tortula latifolia]
		NADH dehydrogenase subunit 2 [Isothecium alopecurum]
		NADH dehydrogenase subunit 2 [Hedwigia ciliata]
		NADH dehydrogenase subunit 2 [Rhacocarpus purpurascens]
		NADH dehydrogenase subunit 2 [Timmiella sp. VKLBN991028]
		NADH dehydrogenase subunit 2 [Atrichum undulatum]
		NADH dehydrogenase subunit 2 [Cucumis melo subsp. melo]
		NADH dehydrogenase subunit 2 [Encalypta streptocarpa]
		NADH dehydrogenase subunit 2 [Discelium nudum]
		NADH dehydrogenase subunit 2 [Chamaebryum pottioides]
		NADH dehydrogenase subunit 2 [Schistostega pennata]
		NADH dehydrogenase subunit 2 [Ceratodon purpureus]
		NADH dehydrogenase subunit 2 [Gigaspermum repens]
		NADH dehydrogenase subunit 2 [Timmia megapolitana subsp. bavarica]
		NADH dehydrogenase subunit 2 [Funaria hygrometrica]
		NADH dehydrogenase subunit 2 [Grimmia cribrosa]
		NADH dehydrogenase subunit 2 [Timmia austriaca]
		NADH dehydrogenase subunit N [Sinorhizobium medicae WSM419]
		NADH dehydrogenase subunit 2 [Orthodicranum montanum]
		NADH dehydrogenase subunit N [Sinorhizobium fredii NGR234]
		NADH dehydrogenase subunit 2 (mitochondrion) [Silene vulgaris]
		NADH dehydrogenase subunit 2 [Diphyscium sessile]
		NADH dehydrogenase subunit 2 [Arabidopsis thaliana]
		NADH dehydrogenase subunit 2 [Buxbaumia aphylla]
		NADH dehydrogenase subunit 2 [Scorpidium scorpioides]
		NADH dehydrogenase subunit 2 [Andreaea nivalis]
		NADH-quinone oxidoreductase, subunit N [Azospirillum brasilense Sp245]
		NADH dehydrogenase subunit 2 [Tetraphis pellucida]
		NADH dehydrogenase subunit 2 (mitochondrion) [Silene vulgaris]
		NADH dehydrogenase I subunit N [Sinorhizobium fredii HH103]
		NADH dehydrogenase subunit 2 [Splachnum ampullaceum]
		NADH dehydrogenase I subunit N [Azospirillum sp. B510]
		NADH dehydrogenase subunit 2 [Orthodontium lineare]
		NADH dehydrogenase subunit 2 [Homalia trichomanoides]
		NADH dehydrogenase subunit 2 [Pottia truncata]
		NADH dehydrogenase subunit 2 [Arabidopsis thaliana]
		NADH dehydrogenase subunit 2 [Bartramia halleriana]
		proton-translocating NADH-quinone oxidoreductase chain N [Sinorhizobium meliloti AK83]
		NADH dehydrogenase subunit 2 [Zea mays subsp. parviglumis]
		NADH dehydrogenase subunit 2 [Racomitrium lanuginosum]
		proton-translocating NADH-quinone oxidoreductase, chain N [Sinorhizobium meliloti BL225C]
		nad2 gene product (mitochondrion) [Boea hygrometrica]
		NADH dehydrogenase subunit 2 [Beta vulgaris subsp. vulgaris]
		NADH dehydrogenase subunit 2 [Grimmia donniana]
		NADH dehydrogenase subunit N [Sinorhizobium meliloti 1021]
		NADH dehydrogenase subunit N [Hoeflea phototrophica DFL-43]
		NADH dehydrogenase subunit 2 [Leucobryum glaucum]
		COG1007: NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Magnetospirillum magnetotacticum MS-1]
		NADH dehydrogenase subunit 2 (mitochondrion) [Ricinus communis]
		NADH dehydrogenase subunit 2 (mitochondrion) [Malus x domestica]
		NADH-quinone oxidoreductase subunit N [Azospirillum lipoferum 4B]
		NADH dehydrogenase subunit 2 [Hygrohypnum ochraceum]
		NADH dehydrogenase subunit 2 [Zea mays subsp. mays]
		NADH dehydrogenase subunit N [Magnetospirillum magneticum AMB-1]
		NADH dehydrogenase subunit 2 [Oryza sativa Indica Group]
		NADH dehydrogenase subunit N [Tistrella mobilis KA081020-065]
		NADH dehydrogenase subunit 2 [Herzogiella seligeri]
		NADH dehydrogenase subunit N [Xanthobacter autotrophicus Py2]
		NADH dehydrogenase subunit 2 (mitochondrion) [Zea mays subsp. mays]
		NAD(P)H-quinone oxidoreductase subunit 2 [Rhizobium sp. PDO1-076]
		NADH dehydrogenase subunit 2 [Carica papaya]
		NADH dehydrogenase subunit 2 [Takakia lepidozioides]
		NADH:ubiquinone oxidoreductase subunit N [Agrobacterium albertimagni AOL15]
		NADH dehydrogenase subunit 2 [Vigna radiata]
		NADH dehydrogenase subunit 2 [Oligotrichum hercynicum]
		NADH dehydrogenase subunit 2 [Fontinalis antipyretica]
		NADH:ubiquinone oxidoreductase subunit N [Thalassospira profundimaris WP0211]
		NADH dehydrogenase subunit 2 [Nicotiana tabacum]
		NADH dehydrogenase subunit 2 [Magnetospirillum gryphiswaldense MSR-1]
		proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium extorquens PA1]
		NADH dehydrogenase subunit N [Azospirillum amazonense Y2]
		NADH dehydrogenase subunit 2 [Aulacomnium androgynum]
		proton-translocating NADH-quinone oxidoreductase subunit N [Parvibaculum lavamentivorans DS-1]
		nad2 [Arabidopsis thaliana]
		NADH:ubiquinone oxidoreductase subunit N [Oceanibaculum indicum P24]
		NADH dehydrogenase subunit 2 (mitochondrion) [Phaeoceros laevis]
		NADH-quinone oxidoreductase subunit N [Rhizobium mesoamericanum STM3625]
		nad2 [Triticum aestivum]
		NADH dehydrogenase subunit 2 [Bambusa oldhamii]
		proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium nodulans ORS 2060]
		NADH:ubiquinone oxidoreductase subunit N [Thalassospira xiamenensis M-5 = DSM 17429]
		NADH-quinone oxidoreductase chain N (NADH dehydrogenase I, chain N) (NDH-1, chain N) [Phaeospirillum molischianum DSM 120]
		NADH-ubiquinone oxidoreductase chain n protein [Pseudovibrio sp. JE062]
		proton-translocating NADH-quinone oxidoreductase subunit N [Candidatus Puniceispirillum marinum IMCC1322]
		proton-translocating NADH-quinone oxidoreductase, chain N [Pseudovibrio sp. FO-BEG1]
		NADH dehydrogenase I subunit N [Agrobacterium sp. H13-3]
		NADH-quinone oxidoreductase subunit N [Sinorhizobium fredii USDA 257]
		NADH:ubiquinone oxidoreductase subunit N [Agrobacterium tumefaciens 5A]
		proton-translocating NADH-quinone oxidoreductase, chain N [Methylobacterium populi BJ001]
		NADH dehydrogenase subunit 2 [Plagiochila asplenioides]
		NADH dehydrogenase subunit 2 [Saccharina coriacea]
		NADH ubiquinone oxidoreductase chain N [Agrobacterium fabrum str. C58]
		NADH dehydrogenase subunit N [Agrobacterium tumefaciens F2]
		proton-translocating NADH-quinone oxidoreductase, chain N [Phyllobacterium sp. YR531]
		NADH dehydrogenase subunit N [Rhizobium etli CFN 42]
		NADH dehydrogenase subunit 2 [Pellia epiphylla]
		NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 2 - evening primrose mitochondrion
		NADH dehydrogenase subunit N [Dinoroseobacter shibae DFL 12]
		NADH dehydrogenase subunit N [Agrobacterium radiobacter K84]
		NADH:ubiquinone oxidoreductase subunit N [Agrobacterium tumefaciens CCNWGS0286]
		NADH dehydrogenase subunit N [Agrobacterium sp. ATCC 31749]
		NADH-quinone oxidoreductase subunit n [Roseibium sp. TrichSKD4]
		NADH:ubiquinone oxidoreductase subunit N [Rhizobium lupini HPC(L)]
		proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. viciae USDA 2370]
		NADH:ubiquinone oxidoreductase subunit N [Bradyrhizobium sp. CCGE-LA001]
		proton-translocating NADH-quinone oxidoreductase subunit N [Starkeya novella DSM 506]
		NADH dehydrogenase subunit 2 [Hemiselmis andersenii]
		proton-translocating NADH-quinone oxidoreductase, chain N [Methylocystis sp. ATCC 49242]
		NADH dehydrogenase subunit 2 [Mesostigma viride]
		NADH dehydrogenase subunit N [Rhizobium leguminosarum bv. trifolii WSM1325]
		NADH dehydrogenase subunit 2 [Ectocarpus siliculosus]
		NADH dehydrogenase subunit 2 [Vitis vinifera]
		NADH-quinone oxidoreductase chain 14 [Ahrensia sp. R2A130]
		NADH dehydrogenase subunit 2 [Desmarestia viridis]
		NADH dehydrogenase subunit 2 [Fossombronia pusilla]
		NADH-quinone oxidoreductase subunit n [Rhizobium tropici CIAT 899]
		NADH dehydrogenase subunit 2 [Laminaria digitata]
		proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. CF142]
		nad2 gene product (mitochondrion) [Daucus carota subsp. sativus]
		NADH dehydrogenase subunit N [Rhizobium leguminosarum bv. viciae 3841]
		NADH dehydrogenase subunit 2 (mitochondrion) [Mesostigma viride]
		NADH dehydrogenase subunit 2 [Lycopodium annotinum]
		proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. viciae WSM1455]
		proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WSM2297]
		proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. CF122]
		NADH dehydrogenase subunit N [Rhizobium leguminosarum bv. trifolii WSM2304]
		proton-translocating NADH-quinone oxidoreductase subunit N [Methylocella silvestris BL2]
		proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. CF080]
		NADH dehydrogenase subunit 2 [Saccharina japonica]
		proton-translocating NADH-quinone oxidoreductase, chain N [Microvirga sp. WSM3557]
		NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I subunit N) [Methylocystis sp. SC2]
		NADH dehydrogenase subunit N [Chelativorans sp. BNC1]
		NADH dehydrogenase subunit N [Rhizobium etli CIAT 652]
		proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WU95]
		NADH:ubiquinone oxidoreductase subunit N [Rhizobium sp. CCGE 510]
		NADH dehydrogenase subunit N [Stappia aggregata IAM 12614]
		NADH dehydrogenase subunit 2 [Saccharina angustata]
		NADH-ubiquinone oxidoreductase protein, chain N [Rhizobium etli CNPAF512]
		proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WSM2012]
		NADH dehydrogenase I, N subunit [Aurantimonas manganoxydans SI85-9A1]
		proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium sp. 4-46]
		proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium radiotolerans JCM 2831]
		NADH dehydrogenase subunit N [Brucella melitensis bv. 1 str. 16M]
		NADH dehydrogenase subunit N [Brucella abortus bv. 1 str. 9-941]
		NADH-quinone oxidoreductase subunit N [Hyphomicrobium sp. MC1]
		proton-translocating NADH-quinone oxidoreductase [Brucella abortus A13334]
		NADH-ubiquinone oxidoreductase subunit N [Pelagibacterium halotolerans B2]
		NADH:ubiquinone oxidoreductase subunit N [Nitratireductor indicus C115]
		NADH dehydrogenase subunit N [Agrobacterium vitis S4]
		NADH-quinone oxidoreductase subunit N [Candidatus Endolissoclinum patella L2]
		NADH:ubiquinone oxidoreductase subunit N [Nitratireductor aquibiodomus RA22]
		NADH dehydrogenase subunit N [Rhodopseudomonas palustris HaA2]
		NADH dehydrogenase subunit N [Brucella melitensis ATCC 23457]
		NADH dehydrogenase subunit N [Brucella suis ATCC 23445]
		proton-translocating NADH-quinone oxidoreductase, chain N [Brucella melitensis M5-90]
		proton-translocating NADH-quinone oxidoreductase, chain N subfamily [Labrenzia alexandrii DFL-11]
		proton-translocating NADH-quinone oxidoreductase subunit N [Beijerinckia indica subsp. indica ATCC 9039]
		NADH dehydrogenase subunit 2 [Pycnococcus provasolii]
		NADH dehydrogenase subunit N [Rhodopseudomonas palustris BisB5]
		proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium sp. GXF4]
		NADH-quinone oxidoreductase chain N (NADH dehydrogenase I, chain N) (NDH-1, chain N) [Rhizobium sp.]
		NADH dehydrogenase subunit 2 [Dictyota dichotoma]
		NADH dehydrogenase subunit N [Brucella ovis ATCC 25840]
		NADH dehydrogenase subunit N [Brucella canis ATCC 23365]
		NADH dehydrogenase subunit N [Brucella suis 1330]
		Proton-translocating NADH-quinone oxidoreductase, chain N [Polymorphum gilvum SL003B-26A1]
		proton-translocating NADH-quinone oxidoreductase [Brucella canis HSK A52141]
		NADH dehydrogenase subunit N [Bradyrhizobium japonicum USDA 110]
		NADH ubiquinone oxidoreductase chain N [Bradyrhizobium japonicum USDA 6]
		NADH dehydrogenase subunit N [Azorhizobium caulinodans ORS 571]
		Proton-translocating NADH-quinone oxidoreductase, chain N [Rhodospirillum photometricum DSM 122]
		NADH:ubiquinone oxidoreductase subunit N [Oceanicola sp. S124]
		NADH-quinone oxidoreductase subunit N [Acidocella sp. MX-AZ02]
		proton-translocating NADH-quinone oxidoreductase, chain N [Bradyrhizobium sp. WSM471]
		NADH-ubiquinone oxidoreductase chain N [Rhodovulum sp. PH10]
		proton-translocating NADH-quinone oxidoreductase, chain N [Mesorhizobium australicum WSM2073]
		NADP ubiquinone oxidoreductase chain N [Bradyrhizobium sp. S23321]
		proton-translocating NADH-quinone oxidoreductase subunit N [Rhodopseudomonas palustris DX-1]

ref|NP_059360.1| NADH dehydrogenase subunit 2 [Cyanidioschyzon merolae]
dbj|BAA36522.1| NADH-ubiquinone oxidoreductase chain 2 [Cyanidioschyzon merolae strain 10D]
(500 aa)

Score: 951 bits (2458), Expect: 0.0
Length: 500, Idn/Pos/Gap = 500/500/0 (100%/100%/0%)

Query:   1 MVIIINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYIL  60
           MVIIINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYIL
Sbjct:   1 MVIIINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYIL  60

Query:  61 FLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLF 120
           FLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLF
Sbjct:  61 FLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLF 120

Query: 121 ILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGL 180
           ILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGL
Sbjct: 121 ILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGL 180

Query: 181 LLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPF 240
           LLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPF
Sbjct: 181 LLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPF 240

Query: 241 HMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFL 300
           HMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFL
Sbjct: 241 HMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFL 300

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL
Sbjct: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC
Sbjct: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT
Sbjct: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480

Query: 481 FFCLNPNLIINSIYIISTIN 500
           FFCLNPNLIINSIYIISTIN
Sbjct: 481 FFCLNPNLIINSIYIISTIN 500

gb|AEX37498.1| NADH dehydrogenase subunit 2 (mitochondrion) [Gracilariopsis lemaneiformis]
(491 aa)

Score: 368 bits (945), Expect: 3.05294e-99
Length: 487, Idn/Pos/Gap = 214/315/17 (43%/64%/3%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLV--VITFTYILFLIINT  66
           + Y  +PE+Y+   + ILL+YG+F+ST    GYP+L+KNF  LV  ++ F+++L     T
Sbjct:   3 NFYSILPEIYILCNICILLMYGVFFSTFPSLGYPLLNKNFNLLVLQILIFSFLL-AFSQT  61

Query:  67 PDFLSTYF----PSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFIL 122
           P  L  +       FF +     + K I +L  I ++ L       EKLN FEF++L +L
Sbjct:  62 PLNLLNWNNLLISDFFTY-----YAKLIIILATIGWLLLSFGYSIKEKLNYFEFWILVLL 116

Query: 123 SILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLL 182
           +++++  I   +DLL+IY+++E  +LIFY+LA+I+RTSEFSTEAGLKYFILG F++  LL
Sbjct: 117 AVVAMLFITQAYDLLTIYLTIEFQSLIFYILASIKRTSEFSTEAGLKYFILGAFASAFLL 176

Query: 183 FGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHM 242
           FG +++YG  G+TN  DLS  F  ++      EI  +L++G +FI  A  FKLSAAPFH+
Sbjct: 177 FGSSIVYGLTGLTNLSDLSKLFLGLIGN----EISFNLIIGFIFILVALLFKLSAAPFHV 232

Query: 243 WSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGT 302
           WSPDVYEG   S+   F I  K+ I  L       + ++  + WQ + LI AF S+ +GT
Sbjct: 233 WSPDVYEGAPISVTAFFSILPKLAILGLLFRFLLFTFYDFISYWQSIILIAAFLSILIGT 292

Query: 303 FIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSL 362
           F AFAQTK+KRFLAYSSINH+GF ++A+ S + N   S+IFY +IYI+   GIFA  +++
Sbjct: 293 FGAFAQTKWKRFLAYSSINHIGFFLLALLSGDLNSISSVIFYGIIYIITMSGIFAFTVNV 352

Query: 363 RNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLK 422
            NF  Y   +Q+RY+S    L+KT P +AF++ IILFS++GIPP+AGFF KL V L  ++
Sbjct: 353 -NFYAYSKTYQLRYLSNIKGLAKTDPFLAFALTIILFSMAGIPPMAGFFAKLFVLLAAVQ 411

Query: 423 SSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFF 482
              + + IFA+ +SC+A FYYIR+IK IYFD+   W +  PM K  + +L  S++ + F 
Sbjct: 412 VDAFGISIFAVIMSCIACFYYIRLIKNIYFDSVINWKVMEPMHKMSSLILGLSLIGILFL 471

Query: 483 CLNPNLI 489
            ++  ++
Sbjct: 472 FIDVEMV 478

ref|YP_004062171.1| nad2 gene product (mitochondrion) [Gracilariophila oryzoides]
gb|ADR03187.1| NADH dehydrogenase subunit 2 (mitochondrion) [Gracilariophila oryzoides]
(490 aa)

Score: 358 bits (918), Expect: 4.2662e-96
Length: 473, Idn/Pos/Gap = 213/311/6 (45%/65%/1%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
           + Y  +PE Y+   + ILL+YG+F+ST    GYP+LSKNF  LV+    +   L  +   
Sbjct:   3 NFYSILPETYILCNICILLMYGVFFSTFSPLGYPLLSKNFNQLVLQILIFCFLLSFSQTP  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
                + +    +    + K I LL  I ++ L    +  EKLN FEF++L +L+I+++ 
Sbjct:  63 LNLLSWNNLLINDLFTYYAKWIILLATIGWLLLSFEYLIKEKLNNFEFWILILLAIMAML 122

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
            II  +DLL+IY+++E  +LIFY+LA+I+RTSEFSTEAGLKYFILG FS+  LLFG ++I
Sbjct: 123 FIIQAYDLLAIYLTIEFQSLIFYILASIKRTSEFSTEAGLKYFILGAFSSAFLLFGSSII 182

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G+TN  DLS FF   +      EI  +L+LGL+FI  AF FKLSAAPFH+W+PDVY
Sbjct: 183 YGLTGLTNLSDLSKFFSGCVGN----EISFNLILGLIFILVAFLFKLSAAPFHVWAPDVY 238

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG   ++     I  K+ IF L       + ++ F  WQ + LI  F S+ +GTF AFAQ
Sbjct: 239 EGAPLAVTAFLSILPKLAIFGLLFKFLLFTFYD-FIFWQSIILIGTFLSILIGTFGAFAQ 297

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
            K+KRFLAYSSINH+GF ++A+ S + NG  S+IFY +IYI+  LGIFA  +++ NF  Y
Sbjct: 298 KKWKRFLAYSSINHIGFFLLALLSGDINGISSIIFYGIIYIITMLGIFAFAVNV-NFYVY 356

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
             ++Q RY+S    L+KT+P +A ++ ++LFS++GIPP+AGFF KL V L+ ++ + + +
Sbjct: 357 PKSYQFRYLSSVNGLAKTNPFLASALTVVLFSMAGIPPMAGFFAKLFVLLSAIQVNAFGI 416

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTF 481
            IFA+ +SC+A FYYIR+IK IYFD+   W +  P++K+ + +L  S++ + F
Sbjct: 417 SIFAVVMSCIACFYYIRLIKNIYFDSTTDWEVIKPINKTSSLILGISLVSILF 469

ref|YP_665650.1| NADH dehydrogenase subunit 2 [Nephroselmis olivacea]
gb|AAF03177.1|AF110138_9 NADH dehydrogenase subunit 2 [Nephroselmis olivacea]
(496 aa)

Score: 347 bits (891), Expect: 5.48439e-93
Length: 474, Idn/Pos/Gap = 185/292/19 (39%/61%/4%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D     PEL+L     +LL+YGI  ST+  Y YPIL  N  +L + +  +   L+I+ P
Sbjct:   9 NDFQAVFPELFLVTATIVLLVYGIVLSTSNRYDYPILIGNVSWLAIFSLGFAFLLLISDP  68

Query:  68 DFLSTYFPSFFFFNNSL------KWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFI 121
                 F +   F NSL       ++K + +L  IC + + +  +  +  + FE+ +L +
Sbjct:  69 ------FKNSILFYNSLLIDPFASFLKGLIILCSICAILMSLDYLKQKSFHAFEYVILIL 122

Query: 122 LSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLL 181
            S  S+ +++S +D LS+Y+++E+ +L FYVLA  +R+SEFSTEAGLKYFIL  F++G++
Sbjct: 123 FSTCSMLIMVSAYDFLSMYLAIELQSLCFYVLAASKRSSEFSTEAGLKYFILSAFASGII 182

Query: 182 LFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFH 241
           LFG ++IYG  GITNF +L +FF           + + +LLG++FIS    FKL+AAPFH
Sbjct: 183 LFGCSMIYGLTGITNFGELVIFFTG--NAAIPFHLSSGILLGILFISVGLLFKLTAAPFH 240

Query: 242 MWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLG 301
           MW+PDVYEG+ T +   F I  K+ I  LFI     S ++L NV Q + + C+  S+ +G
Sbjct: 241 MWAPDVYEGSPTPVTAFFAIVPKLAILGLFIRFLLFSCYDLMNVCQSIIIFCSLASMMIG 300

Query: 302 TFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLS 361
              A +Q + KR LA+SSI H+G+I++  +    +G  SL+ YM+IY  + +G FA +LS
Sbjct: 301 ALAALSQKRIKRMLAFSSIGHIGYILMGFACGTIDGMQSLLLYMVIYSFMTIGAFAVVLS 360

Query: 362 LRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCL 421
           L++      +  ++YI +FT+L K +PIIA ++ +ILFS++GIPP+AGFF K  +FL  +
Sbjct: 361 LQH-----QSPSMKYIEDFTMLGKMNPIIAVTMSMILFSMAGIPPLAGFFAKYYIFLAAI 415

Query: 422 KSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFS 475
           +S  Y L    +  S ++ FYYIRI+KI+YF+    W+    +D+ K+ +L+ +
Sbjct: 416 ESGWYWLATIGVLTSVISCFYYIRIMKIMYFEKRKGWIYTQGVDREKSVILAMT 469

ref|YP_006665877.1| NADH dehydrogenase subunit 2 (mitochondrion) [Porphyra umbilicalis]
gb|AFC17780.1| NADH dehydrogenase subunit 2 (mitochondrion) [Porphyra umbilicalis]
(495 aa)

Score: 344 bits (883), Expect: 5.86467e-92
Length: 486, Idn/Pos/Gap = 207/312/9 (42%/64%/1%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFL--IINT  66
           D Y  + E+Y+  +V +LLIYG+  +T+   G P+L  N G   + T    L+L  + NT
Sbjct:   8 DFYALLTEIYILNSVCVLLIYGVILNTSLKRGTPVLDHNIGGFAIQTVIISLWLTFLSNT  67

Query:  67 PDFLSTYFPSFFFFNNSLKW-IKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSIL 125
           P  +S    +    ++ L + +K + L   + ++F+V S    EK+N +E++++ IL+I+
Sbjct:  68 PHMISW---NALLCHDFLSYGLKNVILATALFWIFIVFSYNKAEKINFYEYWIISILAIV 124

Query: 126 SIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGI 185
           ++  I ++FD L +Y+++E  ++ FY+LA+ +RTSEFSTEAGLKYF+LG FS+ LLL GI
Sbjct: 125 AMLFISNSFDFLVMYLAIEFQSIAFYILASFKRTSEFSTEAGLKYFVLGAFSSALLLLGI 184

Query: 186 ALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +L+YG  G+TNF DLS FF  I   KS +   T  LLG+V I  A FFK+SAAPFHMWSP
Sbjct: 185 SLLYGTTGLTNFGDLSKFFGGITSTKSCVINAT--LLGIVLIEAALFFKISAAPFHMWSP 242

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIA 305
           DVYEG  T++ + F I  K+ +  L   +F     E+  +     +ICAF S+ +GTF A
Sbjct: 243 DVYEGAPTNVTSFFGILPKLALVGLMFRIFYLCCAEIIYMLNFTLVICAFLSMLIGTFGA 302

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
            AQ K+KRF+AYS+I+HVGFI+   S+  + G +  +FY++IY L +L IF+ +LS RN 
Sbjct: 303 LAQAKWKRFIAYSTISHVGFILAGFSTSEFTGAFGSMFYILIYTLTSLAIFSIVLSFRNI 362

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
            +Y   +Q RY+ + T L K +P+++ S++ +LFS++G+PP  GFF K  V L  L+  L
Sbjct: 363 -SYPTTYQSRYLGDVTGLVKVNPVLSASLVGVLFSMAGMPPFPGFFAKAFVLLALLQEKL 421

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLN 485
             L I AI +SC++ FYYIR+I+ IYF N  V  I+ P++K K+ V+S ++LLL    L 
Sbjct: 422 RGLAILAIILSCISCFYYIRLIQTIYFTNAKVIAIFCPIEKEKSIVISLTMLLLVTTFLK 481

Query: 486 PNLIIN 491
            +LI N
Sbjct: 482 IDLISN 487

ref|NP_062494.1| NADH dehydrogenase subunit 2 [Chondrus crispus]
sp|P48903.1|NU2M_CHOCR RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName: Full=NADH dehydrogenase subunit 2
emb|CAA87619.1| NADH dehydrogenase (ubiquinone), subunit 2 [Chondrus crispus]
(497 aa)

Score: 343 bits (879), Expect: 1.67812e-91
Length: 461, Idn/Pos/Gap = 204/310/9 (44%/67%/1%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
           DIY  +PE+++   V ILL+YG+ +S++   GYP+L++N G L+        F+I     
Sbjct:   7 DIYPILPEIFILSNVCILLVYGVLFSSSIKLGYPLLAQNLG-LLSCQILGCSFIITYYQT  65

Query:  69 FLSTYFPSFFFFNNSLKW-IKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
           FL+    S FF N+   +  K +  L+ + ++ +  S I+ E++N FE+++L +L+I++I
Sbjct:  66 FLNLSSWSDFFINDIFTFKTKCLIFLMCLGWILITFSYINYERINSFEYWILILLAIVAI 125

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
             II ++DLL++Y+S+E  +LIFY+LA+ +RTSEFSTEAGLKYF+LG FS+GLLLFG +L
Sbjct: 126 LFIIQSYDLLTMYLSIEFQSLIFYILASFKRTSEFSTEAGLKYFVLGAFSSGLLLFGSSL 185

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPT--DLLLGLVFISTAFFFKLSAAPFHMWSP 245
           IYG  G+TNF+DL+ FF  +     +LE+ +   L  G   I  +  FKLSAAPFHMW+P
Sbjct: 186 IYGLTGLTNFLDLAKFFTGM----PMLELSSWIGLTTGFTLILVSLLFKLSAAPFHMWAP 241

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIA 305
           DVYEG+ TSI   F I  K+ I  L + L   S  +    W+ + LIC  FS+ +GT  A
Sbjct: 242 DVYEGSPTSITLFFSIMPKLAILSLLLKLLILSFHDFITFWRIIILICIIFSIMIGTLSA 301

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
           F+Q K+KRF+AYSSI+HVGF ++A+ S N  G  S IFY++IY++  LGIF+ +L+LR F
Sbjct: 302 FSQIKWKRFIAYSSISHVGFFLLAILSGNLEGISSSIFYVIIYVITMLGIFSFILTLR-F 360

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
            NY +++Q RY+ +   LS+ +P +A S+ + LFS++GIPP+ GFF KL V L+ L++  
Sbjct: 361 YNYSYHYQTRYLQDLISLSRFNPALAISLTLFLFSMAGIPPLGGFFAKLFVLLSVLQTKS 420

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDK 466
           + + IF + +SC++ FYYI++IK +YF + N W +  P++K
Sbjct: 421 FGISIFVVLMSCISCFYYIKLIKSMYFSSINEWKVLYPINK 461

ref|YP_001315136.1| NADH dehydrogenase subunit 2 [Chlorokybus atmophyticus]
gb|ABO15102.1| NADH dehydrogenase subunit 2 [Chlorokybus atmophyticus]
(509 aa)

Score: 340 bits (872), Expect: 9.20548e-91
Length: 486, Idn/Pos/Gap = 185/294/8 (38%/60%/1%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYY------GYPILSKNFGYLVVITFTYILF  61
           +D+    PE++L     ILL+YG+ Y+T +          PIL +N  +L + +      
Sbjct:  11 NDLKGVFPEIFLITGTIILLVYGVIYTTERRVLSKRNIATPILIRNISWLGLYSLVLSFL  70

Query:  62 LIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFI 121
           L INTP      F +    +N   ++K I  +     +   I  +  EKLN FE+ +L +
Sbjct:  71 LTINTPFLNGVIFYNSLVLDNFTYYLKLIIFIATFSTILFSIDYLREEKLNSFEYIILIL 130

Query: 122 LSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLL 181
            S  SI L++S++DL+++Y+++E  +L FYV+A  +R SEFSTEAGLKYF+LG FS+G+L
Sbjct: 131 FSTCSILLMVSSYDLIALYLAIEFQSLSFYVIAASKRNSEFSTEAGLKYFLLGAFSSGIL 190

Query: 182 LFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFH 241
           LFG ++IYG  G+TN  +L+    S+ +   I E  T L +G++F++  F FKL+AAPFH
Sbjct: 191 LFGCSMIYGFTGVTNLEELAKILTSLPEAPWITE--TGLFIGILFLAVGFLFKLTAAPFH 248

Query: 242 MWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLG 301
           MW+PDVYEG+ TS+   F +  KI I      +F  S ++L   WQK+ ++C+  S+ LG
Sbjct: 249 MWAPDVYEGSPTSVTAFFSLAPKIAILGALSRVFFYSFYDLILPWQKIFIVCSIASMILG 308

Query: 302 TFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLS 361
              A  Q K KR LAYSSI HVG+++I +S     G  +L  Y++IYI + + IF+ LL+
Sbjct: 309 ALAAVFQKKIKRLLAYSSIGHVGYMLIGLSCGTIEGVQALFLYLIIYIAMTINIFSLLLA 368

Query: 362 LRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCL 421
           L+         +++YI++   L+ T+PI+A ++  +LFSI+GIPP+AGFF K  +F T L
Sbjct: 369 LQKIGRGGKERRLKYIADLRGLAHTNPILALTLTAVLFSIAGIPPLAGFFGKFYLFFTAL 428

Query: 422 KSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTF 481
            +SLY L +  +  S ++ FYYIR++KI+YF+  N W ++  + +  + +L+ +   + F
Sbjct: 429 SASLYLLAVIGVVTSVISCFYYIRLVKIMYFEKINTWPLWGSIKRENSLLLAITFFFILF 488

Query: 482 FCLNPN 487
             + P+
Sbjct: 489 LGIYPS 494

ref|YP_004062195.1| nad2 gene product (mitochondrion) [Gracilariopsis andersonii]
gb|ADR03211.1| NADH dehydrogenase subunit 2 (mitochondrion) [Gracilariopsis andersonii]
(492 aa)

Score: 340 bits (872), Expect: 9.59764e-91
Length: 436, Idn/Pos/Gap = 196/288/11 (44%/66%/2%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLV--VITFTYILFLIINT  66
           + Y  +PE Y+   + ILL+YG+F+ST    GYP+LSKNF  LV  ++ F+++L      
Sbjct:   3 NFYSILPETYILCNICILLMYGVFFSTFSLLGYPLLSKNFNLLVLQILIFSFLLAFSQTP  62

Query:  67 PDFLSTYFPSFFFFNNSLKW-IKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSIL 125
            + LS    +    N+   +  K I  L  I ++ L    +  EKLN FEF++L +L+++
Sbjct:  63 LNLLSC---NDLLINDLFTYYAKLIIHLATIGWLLLSFEYLIKEKLNYFEFWILILLAVM 119

Query: 126 SIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGI 185
           ++  II  +DLL+IY+++E  +LIFY+LA+++RTSEFSTEAGLKYFILG FS+  LLFG 
Sbjct: 120 AMLFIIQAYDLLAIYLTIEFQSLIFYILASVKRTSEFSTEAGLKYFILGAFSSAFLLFGS 179

Query: 186 ALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           ++IYG  G+TN  DLS  F  ++      EI  +L++G +FI  AF FKLSAAPFH+WSP
Sbjct: 180 SIIYGLTGLTNLSDLSKLFSGLVGN----EISFNLIIGFIFILVAFLFKLSAAPFHVWSP 235

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIA 305
           DVYEG   S+   F I  K+ IF L       + ++  + WQ + LI  F S+ +GTF A
Sbjct: 236 DVYEGAPLSVTAFFSILPKLAIFGLLFRFLLFTFYDFISYWQSIILIVTFLSILIGTFGA 295

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
           FAQTK+KRFLAYSSINH+GF ++A+ S + N   S+IFY ++YI+  LGIFA  ++++ F
Sbjct: 296 FAQTKWKRFLAYSSINHIGFFLLALLSGDLNSISSVIFYGIVYIITMLGIFAFAVNVK-F 354

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
             Y  ++Q+RY+     L+KT+P +AF++ +ILFS++GIPP+AGFF KL V L  ++   
Sbjct: 355 YVYPKSYQLRYLYSINGLAKTNPFLAFALTVILFSMAGIPPMAGFFAKLFVLLAAVQVEA 414

Query: 426 YSLVIFAITISCLATF 441
           + + IFA+ +SC+A F
Sbjct: 415 FGITIFAVVMSCIACF 430

emb|CCO13931.1| NADH dehydrogenase subunit 2 (Partial), partial [Bathycoccus prasinos]
(493 aa)

Score: 338 bits (868), Expect: 3.1648e-90
Length: 488, Idn/Pos/Gap = 197/300/18 (40%/61%/3%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D Y  +PELYLTL+  +LL++G+FYST+K +  P + +   +L +        L+ N P
Sbjct:   9 NDFYAILPELYLTLSTLVLLLFGVFYSTSKKHQSPSMMQTVAWLGLFCLFCTFCLLQNLP  68

Query:  68 DFLSTYF-------PSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLF 120
               T+F       P  FFF       KT+ LL     +F+ +     E    FE+ LL 
Sbjct:  69 FSSMTFFYATLIMDPLSFFF-------KTLVLLGSGFSLFISLQYFQAEDFKDFEYTLLL 121

Query: 121 ILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGL 180
           + S  S+ L+IS  D +S+Y+++EM +L  YVLA  +R SEFSTEAGLKYF+LG FS+G+
Sbjct: 122 LFSTCSMLLLISASDFISMYLAIEMQSLCLYVLAASKRNSEFSTEAGLKYFLLGAFSSGI 181

Query: 181 LLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPF 240
           LLFG +++YG  G+T F   S  F  +    + +E  + L +G++FI+  F FKL+AAPF
Sbjct: 182 LLFGCSILYGLTGLTGFQSFSKLFSGVGGSLA-METQSFLSVGVLFIAVGFLFKLTAAPF 240

Query: 241 HMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFL 300
           H W+PDVYEG  TS+   F I  K+ I  +F+ LF    ++    WQ + ++ +  SLF+
Sbjct: 241 HFWAPDVYEGAPTSVTAFFSIAPKLAIMAVFLRLFLVGFYDFLFSWQSILIVSSLLSLFI 300

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G+F A +QT+ KR L YSSI H+G++++ V+S    G  S++ Y+ IY ++ L IFA +L
Sbjct: 301 GSFGAVSQTRVKRLLVYSSIGHMGYLLMGVASGTVEGVQSVLLYLCIYSVMTLNIFAIVL 360

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           SLR+ +       ++YI + ++LSK+HP++AFS+ + +FS++GIPP+AGF +K  +F   
Sbjct: 361 SLRDEQT---GQNVKYIEDMSMLSKSHPLLAFSLTLTMFSMAGIPPLAGFCSKFYLFFAA 417

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           L SSLY L +F I  S L+ FYY+R+IK +YFD        V MD  K++V++ + L + 
Sbjct: 418 LSSSLYFLAVFGILSSMLSCFYYLRVIKTMYFDQSKQPFQNVKMDHEKSWVITLTTLFVV 477

Query: 481 FFCLNPNL 488
           FF L PN+
Sbjct: 478 FFFLYPNV 485

ref|YP_002860127.1| NADH dehydrogenase subunit 2 [Micromonas sp. RCC299]
gb|ACO55591.1| NADH dehydrogenase subunit 2 [Micromonas sp. RCC299]
(500 aa)

Score: 338 bits (866), Expect: 4.27363e-90
Length: 481, Idn/Pos/Gap = 185/293/8 (38%/60%/1%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D Y   PEL+LT T  +LL++G+ +ST+K  GYPIL+    +L V +      L I++P
Sbjct:  12 NDFYALFPELFLTCTTMLLLMFGVVWSTSKAEGYPILTHTIAWLSVWSLVCAFGLTIHSP  71

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
             +   F + F  +     +K + L      + + +  +    LN+FE+ +L +LS +S+
Sbjct:  72 FSVMVSFYNTFVIDELTFLLKAMVLCSATAAMLMSMEYLKTSMLNIFEYSILVLLSTISM 131

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS++D +S+Y+++EM +L FYVLA  +R SEFSTEAGLKYF+LG FS+G+LLFG +L
Sbjct: 132 LLLISSYDFISMYLAIEMQSLCFYVLAASKRHSEFSTEAGLKYFLLGAFSSGVLLFGCSL 191

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLL-LGLVFISTAFFFKLSAAPFHMWSPD 246
           +YG  G+TNF D++      +   ++ +     L LG+  I   F FKL+AAPFH W+PD
Sbjct: 192 VYGYTGLTNFEDIA----KCLAGSALFQTHHSFLHLGMGLIMIGFLFKLTAAPFHFWAPD 247

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG+ TS+   F I  KI +  +F+ L   S ++L   WQ +   C+  SLF+G F A 
Sbjct: 248 VYEGSPTSVTAFFAITPKIALLGVFLRLLLGSFYDLLFAWQYVLFFCSICSLFIGAFGAM 307

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
           AQ K KR L YSSI HVG+++I +      G  +++ Y+++YI + + +F  +LS  +  
Sbjct: 308 AQKKIKRLLVYSSIGHVGYLLIGICCGTVEGLQAVLLYLILYIFMTVNVFTIVLSCIDHS 367

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
                 +++YI +  +L +THP++A +    LFS++GIPP+AGF +K  +F   + SSLY
Sbjct: 368 K---TFRLKYIQDLGLLGQTHPVLALTFSCTLFSMAGIPPLAGFCSKFYLFFAAMGSSLY 424

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNP 486
            L +F +  S ++ FYYIR+IKI+YF+  +  + Y  +D  KA +L  +  ++ FF L P
Sbjct: 425 GLALFGVLSSVVSCFYYIRLIKIMYFEQPSQLVTYGAIDHEKAILLGITTTVIVFFFLCP 484

Query: 487 N 487
           +
Sbjct: 485 H 485

ref|NP_044802.1| NADH dehydrogenase subunit 2 [Reclinomonas americana]
gb|AAD11917.1| NADH dehydrogenase subunit 2 (mitochondrion) [Reclinomonas americana]
(498 aa)

Score: 333 bits (853), Expect: 1.72215e-88
Length: 489, Idn/Pos/Gap = 188/296/17 (38%/60%/3%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +DI +  PEL+LT+++  LL+YG+ YST+ ++  PI+ +  G+L +      + L+IN P
Sbjct:   9 NDIKVLFPELFLTISILALLMYGVVYSTSSHHDNPIIIRATGWLSIQILFLTILLLINNP  68

Query:  68 DFLSTYFPSFFFFNNSLKW------IKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFI 121
                   +  F NN L         K + L+     + +    I  E++N FE+ +L +
Sbjct:  69 ------IHNQVFMNNLLVADYFGLITKIVLLISSSIAIIISFDYIKKERINSFEYMVLVL 122

Query: 122 LSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLL 181
           L  L + LIIS++DL+S+Y+++E  +L  YVLA  +R S FS EAGLKYF+LG FS+G++
Sbjct: 123 LGTLGMLLIISSYDLMSMYLAIEFQSLCLYVLAAFKRNSLFSVEAGLKYFVLGAFSSGIM 182

Query: 182 LFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFH 241
           LFGI+++YG  G+T F DL      I      L   + ++LG+VFIS    FK+ A PFH
Sbjct: 183 LFGISILYGFTGVTGFEDLGKLL--IFSSNESLLSSSGIILGIVFISVGLLFKIYAVPFH 240

Query: 242 MWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLG 301
           +W PDVY+G+ T +   F I   I++  L   L+ + L +L   WQ + + C+  S+ +G
Sbjct: 241 VWVPDVYQGSPTIVTAFFAIVPSISVLTLLTRLYSSVLHDLIQYWQPVFIFCSIASMLIG 300

Query: 302 TFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLS 361
           +  A +Q + KR LAYS+I HVG+++IA+S+    G   L+ Y++IYI+++   F  LLS
Sbjct: 301 SLGALSQRRIKRLLAYSAIGHVGYVLIALSTGTPEGIRGLLVYIVIYIIMSACFFTILLS 360

Query: 362 LRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCL 421
           LR   N   N QI  I E   L K++PI++ ++ I+LFS++GIPP+AGFF+KL VFL  +
Sbjct: 361 LRKREN---NTQIVMIDELRALYKSNPILSLTLAIVLFSMAGIPPLAGFFSKLYVFLPAI 417

Query: 422 KSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTF 481
              L+ LV+  I  S ++  YY+ +IKI+YFD  + W+ +  +DK KA VL  +  L+ F
Sbjct: 418 HEGLFLLVVVGIIASVISAVYYLGLIKIMYFDKLDTWVSFEQVDKQKAIVLGLTTFLILF 477

Query: 482 FCLNPNLII 490
           F + P+ ++
Sbjct: 478 FFIYPSPLV 486

ref|YP_539019.1| NADH dehydrogenase subunit 2 [Physcomitrella patens]
dbj|BAE93090.1| NADH dehydrogenase subunit 2 (mitochondrion) [Physcomitrella patens]
(489 aa)

Score: 331 bits (848), Expect: 6.76627e-88
Length: 494, Idn/Pos/Gap = 195/296/39 (39%/59%/7%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVIT-FTYILFLIINTP  67
           D     PE++L     ILLIYG+ +ST+K Y YP L  N  +L +++    IL L  +TP
Sbjct:   5 DFLALFPEIFLINATIILLIYGVVFSTSKKYDYPPLVCNVSWLGLLSVLITILLLASSTP  64

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISL----------EKLNVFEFF 117
             ++       F+NN +    T F     C +FL++S  S           E LN FE  
Sbjct:  65 LTVAN-----LFYNNLIIDHFTYF-----CQIFLLVSTASTIVMCLGYFKEESLNAFESI 114

Query: 118 LLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFS 177
           +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKYFILG FS
Sbjct: 115 ILILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRDSEFSTEAGLKYFILGAFS 174

Query: 178 TGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKSILEIPTDLLLGLVFISTAFFF 233
           +G+LLFG ++IYG  G+TNF +L+  F     ++   +S     + + +G++FI+  F F
Sbjct: 175 SGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS-----SGIFMGILFIAVGFLF 229

Query: 234 KLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLIC 293
           K++A PFHMW+PDVYEG+ T +   F I  KI+I    + +F  S ++    WQ+L   C
Sbjct: 230 KITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMVRVFIYSFYD--PTWQQLFFFC 287

Query: 294 AFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINL 353
           +  S+ LG   A AQ K KR LAYSSI HVG++ I  S     G  SL+  + IY+L+ +
Sbjct: 288 SIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSCGTIEGIQSLLIGVFIYVLMTI 347

Query: 354 GIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTK 413
            +FA +L+LR  R        +YI++   L+KT+PI+A ++ I +FS +GIPP+AGF +K
Sbjct: 348 NVFAIVLALRQNR-------FKYIADLGALAKTNPILAITLSITMFSYAGIPPLAGFCSK 400

Query: 414 LIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             +F   L    Y L +  +  S ++ FYYIR +KI+YFD    W++Y PMD+ K+ +L+
Sbjct: 401 FYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYFDTPKKWILYKPMDREKSLLLA 460

Query: 474 FSVLLLTFFCLNPN 487
            ++ L++FF L P+
Sbjct: 461 ITLFLISFFFLYPS 474

ref|YP_004927624.1| NADH dehydrogenase subunit 2 (mitochondrion) [Anomodon rugelii]
gb|AEH99671.1| NADH dehydrogenase subunit 2 [Anomodon rugelii]
(489 aa)

Score: 330 bits (845), Expect: 1.26509e-87
Length: 494, Idn/Pos/Gap = 195/296/39 (39%/59%/7%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVIT-FTYILFLIINTP  67
           D     PE++L     ILLIYG+ +ST+K Y YP L  N  +L +++    IL +  +TP
Sbjct:   5 DFLALFPEIFLINATIILLIYGVVFSTSKKYDYPPLVCNVSWLGLLSVLITILLVASSTP  64

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISL----------EKLNVFEFF 117
             ++       F+NN +    T F     C +FL+IS  S           E LN FE  
Sbjct:  65 LTVAN-----LFYNNLIIDNFTYF-----CQIFLLISTASTIVMCLGYFKEEGLNAFESI 114

Query: 118 LLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFS 177
           +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKYFILG FS
Sbjct: 115 VLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRDSEFSTEAGLKYFILGAFS 174

Query: 178 TGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKSILEIPTDLLLGLVFISTAFFF 233
           +G+LLFG ++IYG  G+TNF +L+  F     ++   +S     + + +G++FI+  F F
Sbjct: 175 SGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS-----SGIFMGILFIAVGFLF 229

Query: 234 KLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLIC 293
           K++A PFHMW+PDVYEG+ T +   F I  KI+I    + +F  S ++    WQ+L   C
Sbjct: 230 KITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMVRVFIYSFYD--PTWQQLFFFC 287

Query: 294 AFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINL 353
           +  S+ LG   A AQ K KR LAYSSI HVG++ I  S     G  SL+  + IY+L+ +
Sbjct: 288 SIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSCGTIEGIQSLLIGVFIYVLMTI 347

Query: 354 GIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTK 413
            +FA +L+LR  R        +YI++   L+KT+PI+A ++ I +FS +GIPP+AGF +K
Sbjct: 348 NVFAIVLALRQNR-------FKYIADLGALAKTNPILAITLSITMFSYAGIPPLAGFCSK 400

Query: 414 LIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             +F   L    Y L +  +  S ++ FYYIR +KI+YFD    W++Y PMD+ K+ +L+
Sbjct: 401 FYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYFDTPKKWILYKPMDREKSLLLA 460

Query: 474 FSVLLLTFFCLNPN 487
            ++ L++FF L P+
Sbjct: 461 ITLFLISFFFLYPS 474

ref|NP_042274.1| NADH dehydrogenase (ubiquinone), subunit 2 [Prototheca wickerhamii]
gb|AAD12662.1| NADH dehydrogenase (ubiquinone), subunit 2 [Prototheca wickerhamii]
(510 aa)

Score: 329 bits (844), Expect: 1.75164e-87
Length: 481, Idn/Pos/Gap = 178/295/12 (37%/61%/2%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D     PE++L  T   LL+YG+  ST+K   YP+LS N  + V++ F     LI N P
Sbjct:  20 NDFLALFPEIFLVSTGIFLLVYGVITSTSKSLNYPLLSYNISWFVIMAFLLTAILIYNNP  79

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
              +    +    ++  +++K + LL   C V + +  I  E  N FE F+L + ++ S+
Sbjct:  80 INNAVLLYNTLVIDDFTQFVKIVCLLSSACVVSISLQYIKTEAGNAFEGFILILFAVSSM 139

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
             + S+ D +S+Y+++E+ +L FYVLA ++R SEF+TEAGLKYF+LG FS+GLL+FG +L
Sbjct: 140 LFLTSSADFISLYLAIELQSLSFYVLAALKRNSEFATEAGLKYFLLGAFSSGLLIFGCSL 199

Query: 188 IYGCIGITNFIDLSLFF---QSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           IYG  G+ +F + +  F    S+  E +++       LG+V I   F FK++AAPFHMWS
Sbjct: 200 IYGYTGVLSFSECAKIFAAGDSVTNESALVS------LGIVSILVGFLFKIAAAPFHMWS 253

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVY+G  T I   F+I  KI +F +F+ +F  S ++LF +WQ L +  +  S+ +G   
Sbjct: 254 PDVYQGAPTPITAFFVITPKIALFAVFLRVFLQSFYDLFPIWQTLIIFASLSSMLVGALA 313

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL-SLR 363
           A +Q + KR +A+SSINHVG++++  +  +  G  ++  Y+++YI +N+ +F+ LL ++R
Sbjct: 314 ALSQNQIKRLMAFSSINHVGYLLVGFACASIEGIQAVSIYLVVYIFMNIVVFSILLINMR 373

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
           +  N     +I+YI++   L+KT+P++AF+  I LFS++GIPP+AGF++K  +F   L S
Sbjct: 374 HTHNNGL-PRIKYITDLAFLAKTNPLLAFTFSITLFSMAGIPPLAGFYSKAYIFFAALGS 432

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFC 483
           +L    +  +  S ++ FYY+R+I+I+YF     W     + ++ AF L+ S+  L  FC
Sbjct: 433 NLGVCAVVGVCASVVSCFYYLRLIRIMYFSTPKTWCSTARVPRTNAFALAISLFFL-IFC 491

Query: 484 L 484
           +
Sbjct: 492 M 492

gb|AEB39977.1| NADH dehydrogenase subunit 2 [Funaria hygrometrica]
(487 aa)

Score: 329 bits (844), Expect: 1.81109e-87
Length: 494, Idn/Pos/Gap = 194/295/39 (39%/59%/7%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVIT-FTYILFLIINTP  67
           D     PE++L     ILLIYG+ +ST+K Y YP L  N  +L +++    IL +  +TP
Sbjct:   5 DFLALFPEIFLINATIILLIYGVVFSTSKKYDYPPLVCNVSWLGLLSVLITILLVASSTP  64

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISL----------EKLNVFEFF 117
             ++       F+NN +    T F     C +FL++S  S           E LN FE  
Sbjct:  65 LTVAN-----LFYNNLIIDHFTYF-----CQIFLLVSTASTIVMCLGYFKEESLNAFESI 114

Query: 118 LLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFS 177
           +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKYFILG FS
Sbjct: 115 ILILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRDSEFSTEAGLKYFILGAFS 174

Query: 178 TGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKSILEIPTDLLLGLVFISTAFFF 233
           +G+LLFG ++IYG  G+TNF +L+  F     ++   +S     + + +G++FI+  F F
Sbjct: 175 SGILLFGCSMIYGFTGVTNFGELAKIFTGYEITLFGAQS-----SGIFMGILFIAVGFLF 229

Query: 234 KLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLIC 293
           K++A PFHMW+PDVYEG+ T +   F I  KI I    + +F  S ++    WQ+L   C
Sbjct: 230 KITAVPFHMWAPDVYEGSPTLVTAFFSIAPKIAILANMVRVFIYSFYD--PTWQQLFFFC 287

Query: 294 AFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINL 353
           +  S+ LG   A AQ K KR LAYSSI HVG++ I  S     G  SL+  + IY+L+ +
Sbjct: 288 SIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSCGTIEGIQSLLIGVFIYVLMTI 347

Query: 354 GIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTK 413
            +FA +L+LR  R        +YI++   L+KT+PI+A ++ I +FS +GIPP+AGF +K
Sbjct: 348 NVFAIVLALRQNR-------FKYIADLGALAKTNPILAITLSITMFSYAGIPPLAGFCSK 400

Query: 414 LIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             +F   L    Y L +  +  S ++ FYYIR +KI+YFD    W++Y PMD+ K+ +L+
Sbjct: 401 FYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYFDTPKKWILYKPMDREKSLLLA 460

Query: 474 FSVLLLTFFCLNPN 487
            ++ L++FF L P+
Sbjct: 461 ITLFLISFFFLYPS 474

ref|YP_006234136.1| NADH dehydrogenase subunit 2 (mitochondrion) [Pyropia haitanensis]
gb|AFH57647.1| NADH dehydrogenase subunit 2 (mitochondrion) [Pyropia haitanensis]
(495 aa)

Score: 328 bits (842), Expect: 2.86576e-87
Length: 502, Idn/Pos/Gap = 211/319/21 (42%/63%/4%)

Query:   2 VIIINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILF  61
           +++I+  D YI   E+Y    +  LLIYG+ ++T+   G P+L  N G L          
Sbjct:   1 MLLISSYDFYILSTEIYFLNAICALLIYGVIFNTSYNRGTPVLDYNIGGLCT------QI  54

Query:  62 LIINTPDFLSTYFPSFFFFNNSLKW------IKTIFLLVGICYVFLVISNISLEKLNVFE 115
           LII     L +  P    +N  L        IK+I +++ + +   + S   +EK+N +E
Sbjct:  55 LIIGMWLTLCSQEPYIISWNALLVHDFLSFGIKSIIIVISLLWSLTIFSYNKIEKINFYE 114

Query: 116 FFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGV 175
           ++++ +L+I+++  I  ++D LS+Y+S+E  ++ FY+LA+ +RTSEFSTEAGLKYF+LG 
Sbjct: 115 YWIVSMLAIIAMLFISCSYDFLSMYLSIEFQSIAFYILASFKRTSEFSTEAGLKYFVLGA 174

Query: 176 FSTGLLLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKL 235
           FS+ LLL GI+L+YG  G+TNF DLS FF SI  E  I      +L  +V I  A  FK+
Sbjct: 175 FSSALLLLGISLLYGITGLTNFGDLSKFFLSISAENFIF--INTILFSIVLIEVALLFKI 232

Query: 236 SAAPFHMWSPDVYEGTLTSIITLFIIFTK---ITIFFLFINLFGTSLFELFNVWQKLTLI 292
           SAAPFHMWSPDVYEG  T++ + F I  K   +++ F  I L   S+F   N      +I
Sbjct: 233 SAAPFHMWSPDVYEGAPTNVTSFFGILPKLALVSLMFRIIFLILPSIFAHLNF---TVII 289

Query: 293 CAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILIN 352
           CA  S+ +GTF A AQ K+KRF+AYS+I+HVGFI+   S++ +NG +S +FY++IY+L +
Sbjct: 290 CAILSMIIGTFGALAQAKWKRFIAYSTISHVGFILAGFSTLEFNGAFSALFYILIYVLTS 349

Query: 353 LGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFT 412
           L IF+ LLS R + +Y   +Q+RY+++   L  T+PI+A S++I+LFS++GIPP  GFF 
Sbjct: 350 LIIFSILLSSRCW-SYPTTYQLRYLTDVVNLVITNPILAGSLIIVLFSMAGIPPFPGFFA 408

Query: 413 KLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVL 472
           K+ V L+ LK  L    I A+++SC++ FYYIR+I+I+ F +    LI+ P++K KA +L
Sbjct: 409 KMFVLLSLLKEQLIGFAIIAVSLSCISCFYYIRLIQIMCFSHVKTILIFYPIEKEKAIIL 468

Query: 473 SFSVLLLTFFCLNPNLIINSIY 494
           SF++LL T   L  +LI N +Y
Sbjct: 469 SFNLLLFTLIFLKIDLISNFVY 490

ref|NP_054402.1| NADH dehydrogenase subunit 2 [Marchantia polymorpha]
sp|P26846.2|NU2M_MARPO RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName: Full=NADH dehydrogenase subunit 2
gb|AAC09399.1| nad2 [Marchantia polymorpha]
(489 aa)

Score: 327 bits (839), Expect: 6.49168e-87
Length: 470, Idn/Pos/Gap = 182/284/19 (38%/60%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVIT-FTYILFLIINTP  67
           D     PE++L     ILLIYG+ +ST+K Y YP L +N G+L +++    IL + + +P
Sbjct:   5 DFLALFPEIFLINATIILLIYGVVFSTSKKYDYPPLVRNVGWLGLLSVLITILLVAVGSP  64

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
             ++    +    +N   + +   LL     + + +     E LN FE  +L +LS  S+
Sbjct:  65 LAVANLVYNNLIIDNFTYFCQIFLLLSTASTMVMCLDYFKQESLNAFESIVLILLSTCSM 124

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
             +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++
Sbjct: 125 LFMISAYDLIAMYLAIELQSLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSM 184

Query: 188 IYGCIGITNFIDLSLFFQ----SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMW 243
           IYG  G+TNF +L+  F     ++   +S     + + +G++FI+  F FK++A PFHMW
Sbjct: 185 IYGFTGVTNFEELAKIFTGYEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMW 239

Query: 244 SPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTF 303
           +PDVYEG+ T +   F I  KI+I    + +F  S ++    WQ+L   C+  S+ LG  
Sbjct: 240 APDVYEGSPTIVTAFFSIAPKISILANMLRVFIYSFYD--PTWQQLFFFCSIASMILGAL 297

Query: 304 IAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR 363
            A AQ K KR LAYSSI HVG+++I  S     G  SL+  + IY+L+ + +FA +L+LR
Sbjct: 298 AAMAQNKVKRLLAYSSIGHVGYLLIGFSCGTIEGIQSLLIGIFIYVLMTVNVFAIVLALR 357

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
             R        +YI++   L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L  
Sbjct: 358 QNR-------FKYIADLGALAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGC 410

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             Y L +  +  S ++ FYYIR +KI+YFD    W++Y PMD+ K+ +L+
Sbjct: 411 GAYLLALIGVVTSVISCFYYIRFVKIMYFDTPKTWVLYKPMDREKSLLLA 460

gb|ACO50734.1| NADH dehydrogenase subunit 2 [Micromonas pusilla CCMP1545]
(496 aa)

Score: 322 bits (824), Expect: 3.83989e-85
Length: 476, Idn/Pos/Gap = 178/285/7 (37%/59%/1%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE +L +T+  LL+ G+  ST+   G+P++     YL V      + L+++TP F    
Sbjct:  15 LPEGFLAVTILGLLVAGVILSTSAPMGFPLMVVPMIYLSVWALLVTVLLVLHTP-FEMVA  73

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           F + F  +     +K   L      + +  + +    +N+FE+ +L +L+ L++  ++S+
Sbjct:  74 FYNVFVVDALAGLLKLGILGGATAALLMSTTYVRTHMVNIFEYGILILLASLAMLFLVSS 133

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
           +D LS+Y+++EM  L FYVLA  +R SEFSTEAGLKYF+LG FS+GLLLFG++L+YGC G
Sbjct: 134 YDFLSMYLAIEMQALCFYVLAGCKRNSEFSTEAGLKYFLLGAFSSGLLLFGMSLVYGCTG 193

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
           +TN  D++     I  E    E+     +GLV ++  F FKLSAAPFH W+PDVYEG  +
Sbjct: 194 LTNVEDVAKLLVGIEAET---EVHALTAVGLVMVTIGFLFKLSAAPFHFWAPDVYEGAPS 250

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
           S+   F I  K  +    + +  T  ++   VWQ L ++    SL +G F A AQ K KR
Sbjct: 251 SVTAFFAIVPKFALVGCTLRVLLTCFYDFLFVWQHLVVVSVLASLLIGAFGAMAQKKIKR 310

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            L YSSI HVGFI++   S    G  +++ Y++IY L  + IF  +LS+ +     +   
Sbjct: 311 VLVYSSIGHVGFILMGFLSGTVEGVQAVLVYLVIYALTTVNIFGIVLSVSSAHGEGY--- 367

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
           ++YIS+   LSK HP +AF++ + LFS++GIPP+AGF+ K IV    L S LY++ +F +
Sbjct: 368 MKYISDLKHLSKAHPALAFALAMTLFSLAGIPPLAGFYAKFIVLFGALTSDLYTVALFGV 427

Query: 434 TISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLI 489
             S ++ FYY+R+IK++YF+  +  +    +D++KA +++ + + L  F L P ++
Sbjct: 428 LTSVVSAFYYLRLIKVMYFEAASDEVTVDGLDRAKATLVACTSVFLMGFFLYPQIL 483

ref|YP_006234244.1| nad2 gene product (mitochondrion) [Huperzia squarrosa]
gb|AEV55690.1| NADH dehydrogenase subunit 2 (mitochondrion) [Huperzia squarrosa]
(489 aa)

Score: 321 bits (823), Expect: 4.35185e-85
Length: 483, Idn/Pos/Gap = 182/284/17 (37%/58%/3%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVIT-FTYILFLIINTP  67
           D     PE++L     ILLIYG+ +ST++ Y YP L +N G+L +++    IL +    P
Sbjct:   5 DFLALFPEIFLINATLILLIYGVVFSTSQKYDYPPLVRNVGWLGLLSVLITILLVAAGAP  64

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
             ++  F +    +N   + +   LL     + + + +   E LN FE  +L +LS  S+
Sbjct:  65 PTVANLFYNTLIKDNFTYFCQIFLLLRTASTIAMCLDHFKQESLNAFETIVLILLSTGSM 124

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
             +I  +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++
Sbjct: 125 LFMIPAYDLIAMYLAIELQSLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSM 184

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSIL---EIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           IYG  GITN  +L+     I+    I       + + LG++FI+  F FK++A PFHMW+
Sbjct: 185 IYGFTGITNSEELA----KILTGYEITLFGAHSSGIFLGILFIAVGFLFKITAVPFHMWA 240

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG+ T +   F I  KI I    + +F  + ++    WQ L  +C+  S+ LG   
Sbjct: 241 PDVYEGSPTMVTAFFSIAPKIAILANMLRVFIYTFYD--PTWQPLFFLCSIASMILGALA 298

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A AQ K KR  AYSSI HVG++ I  S     G  SL+  + IY+L+ +  FA++L+LR 
Sbjct: 299 AMAQNKVKRLSAYSSIGHVGYLCIGFSCGTIEGIQSLLIGIFIYVLMTINAFATVLALRK 358

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            R        +Y+++   L+KT+P +A ++ I +FS +GIPP+AGF +K  +F   L   
Sbjct: 359 TR-------FKYLADLGALAKTNPTLAITLSITMFSYAGIPPLAGFRSKFYLFFAALGCG 411

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCL 484
            Y L +  +  S ++ FYYIR++KI+YFD    W++Y PMD+ K+ +L+ ++   T F L
Sbjct: 412 AYLLALVGVVTSVISCFYYIRLVKIMYFDTPKTWILYKPMDREKSLLLAITLFSPTPFFL 471

Query: 485 NPN 487
            P+
Sbjct: 472 YPS 474

ref|YP_717298.1| nad2 [Ostreococcus tauri]
emb|CAL36420.1| unnamed protein product [Ostreococcus tauri]
(497 aa)

Score: 321 bits (823), Expect: 5.01506e-85
Length: 482, Idn/Pos/Gap = 188/295/13 (39%/61%/2%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D Y  +PEL+L      LL++G+ YST+  +G P L K   +  ++     L L++NTP
Sbjct:   6 NDFYFVLPELFLFGASLSLLMFGVIYSTSVSHGKPGLMKVMSWASIVCLAMTLGLVLNTP  65

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
              +  F      ++   + K + L   I  + + +     E +  FE+ +L  LS LS+
Sbjct:  66 VHSTVVFSQSLLLDDLSTFFKFLILGGSILSILMSVQYFETENMRNFEYLVLVCLSTLSM 125

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+++++DL+S+Y++LEM +L FYVLA  +R SEFSTEAGLKYF+LG FS+G+ L G + 
Sbjct: 126 LLLVASYDLISMYLALEMQSLCFYVLAASQRDSEFSTEAGLKYFLLGAFSSGVFLLGCSF 185

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLL---LGLVFISTAFFFKLSAAPFHMWS 244
           +YG  G+TNF   +LFF     ++S +   +D +   +  +FI   F FKLSAAPFH W+
Sbjct: 186 LYGLTGLTNFEAYALFF----AQQSNIYQTSDWIFVQIAFLFILLGFLFKLSAAPFHFWA 241

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  TS+   F I  K++IF +FI LF  S +EL  +WQ + +     SL +G F 
Sbjct: 242 PDVYEGAPTSVTAFFSIVPKVSIFGVFIKLFFCSFYELALLWQPVIIASGMLSLLVGAFG 301

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           AFAQ K KR L YSSI H+G++++A+S +   G  S++ Y++ YI++ + +FA +L+L++
Sbjct: 302 AFAQKKIKRLLVYSSIGHLGYMLLALSCLTIEGLQSMLAYLIFYIVMTVHVFACVLALKD 361

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            +      +IRY+ +   L+++ P++A + ++  FS++GIPP+AGF  K  VF   L +S
Sbjct: 362 LKT---GQRIRYVEDLKYLAQSQPLVACAFVLNFFSMAGIPPLAGFCAKFYVFFAALGAS 418

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYF-DNCNVWLIYVPMDKSKAFVLSFSVLLLT--F 481
           LY  V  A+  S ++ FYY+R IK +YF    +V + YV MD+ KA+++S +  LL   F
Sbjct: 419 LYFFVAVALFSSIVSCFYYLRFIKFMYFHKETSVSVEYVQMDQQKAWMISITSYLLVYLF 478

Query: 482 FC 483
           FC
Sbjct: 479 FC 480

ref|YP_006280965.1| nad2 gene product (mitochondrion) [Helicosporidium sp. ex Simulium jonesi]
gb|ACT36191.1| NADH dehydrogenase subunit 2 [Helicosporidium sp. ex Simulium jonesi]
(543 aa)

Score: 320 bits (820), Expect: 1.05385e-84
Length: 490, Idn/Pos/Gap = 186/287/14 (37%/58%/2%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D    IPE+YL      LL++G  YST+    YP+LS N G+  +++F Y   LI   P
Sbjct:  43 NDFLTIIPEMYLVSMGLFLLLFGCVYSTSSKLNYPLLSTNIGWFTLLSFFYTFLLIQLNP 102

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
              +T   +    ++  ++IK   LL  I  + + +  I  E  N FE  +L + S  S+
Sbjct: 103 INNATVLYNTLIIDDFTQFIKICTLLASIFSLLISLKYIKNENYNAFESMILILFSTASM 162

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
              IS+ D +S+Y+++E+ +L FYVLA  +R SEFSTE+GLKYFILG FS+G LLFG +L
Sbjct: 163 LFCISSSDFISMYLAVELQSLCFYVLAAFKRNSEFSTESGLKYFILGAFSSGFLLFGCSL 222

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSI----------LEIPTDLLLGLVFISTAFFFKLSA 237
           IY   G  NF + +  F    +  SI          L +P    LG++F+   F FK++A
Sbjct: 223 IYAFTGTLNFAECAKLFAFTGQLDSIGTNYTLDILTLSLPK---LGMIFLLVGFLFKIAA 279

Query: 238 APFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFS 297
           APFHMWSPDVYEG  T +   F+I  K+T F +F+ +F    ++LF++WQ + ++ +  S
Sbjct: 280 APFHMWSPDVYEGAPTPVTAFFVITPKLTYFAVFLRIFYQCFYDLFDIWQMVLILASLAS 339

Query: 298 LFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFA 357
           + +G     +QTK KR +A+SSI HVG+++I  +  +  G +SL  Y++IYI +N+ +F 
Sbjct: 340 MIVGAIGGLSQTKIKRLVAFSSIGHVGYLLIGFACGSIEGIHSLCLYLIIYIFMNIAMFG 399

Query: 358 SLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVF 417
            LLS     + K  + ++YI++   L KT+PI+A ++ I LFS++GIPP+AGF++K  +F
Sbjct: 400 ILLSGLLPADNKLPN-MKYITDLAYLGKTNPILAITLAITLFSMAGIPPLAGFYSKAYLF 458

Query: 418 LTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVL 477
              L + L  L I  +  S  + FYYIR+I+I+YF     W     + K+ A  L+ S+ 
Sbjct: 459 FAALSNDLGLLAIIGVLTSVCSCFYYIRLIRIMYFTTPKNWYSTTRVSKTNAIALALSLY 518

Query: 478 LLTFFCLNPN 487
           +L FF   P+
Sbjct: 519 ILVFFMFYPS 528

ref|YP_003275956.1| NADH dehydrogenase subunit 2 (mitochondrion) [Pleurozia purpurea]
gb|ACR19340.1| NADH dehydrogenase subunit 2 [Pleurozia purpurea]
(489 aa)

Score: 320 bits (819), Expect: 1.55988e-84
Length: 470, Idn/Pos/Gap = 179/278/19 (38%/59%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVIT-FTYILFLIINTP  67
           D     PE++L     ILLIYG+ +ST+K Y YP L +N G+L +++    IL + + +P
Sbjct:   5 DFLALFPEIFLINATIILLIYGVVFSTSKKYDYPPLVRNVGWLGLLSVLITILLVAVGSP  64

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
             ++    +    +N   + +   LL     + + +     E  N FE  +L + S  S+
Sbjct:  65 LAVANLVYNNLIIDNFTYFCQIFLLLSTASTMVMCLDYSKQESSNAFESIVLILFSTCSM 124

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
             +IS +DL+++Y+++E+ +L FYV+A  +R SEFS EAGLKYFILG FS+G+LLFG ++
Sbjct: 125 LFMISAYDLIAMYLAIELQSLCFYVIAASKRDSEFSAEAGLKYFILGAFSSGILLFGCSM 184

Query: 188 IYGCIGITNFIDLSLFFQ----SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMW 243
           IYG  G+TNF +L+  F     ++   +S     + + +G+ FI+  F FK++A PFHMW
Sbjct: 185 IYGFTGVTNFEELAKIFTGYEITLFGAQS-----SGIFMGIFFIAVGFLFKITAVPFHMW 239

Query: 244 SPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTF 303
           +PDVYEG+ T +   F I  KI+I    + +F  S ++    WQ+L   C+  S+ LG  
Sbjct: 240 APDVYEGSPTIVTAFFSIAPKISILANMLRVFIYSFYD--PTWQQLFFFCSIASMILGAL 297

Query: 304 IAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR 363
            A AQ K KR LAYSSI HVG+++I  S     G  SL+    IY+L+ +  FA +L+LR
Sbjct: 298 AAMAQNKVKRLLAYSSIGHVGYLLIGFSCGTIEGIQSLLIGTFIYVLMTVNAFAMVLALR 357

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
             R        +YI++   L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L  
Sbjct: 358 QNR-------FKYIADLGALAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGC 410

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             Y L +  +  S ++ FYYIR +KI+YFD    W++Y PMD+ K+ +L+
Sbjct: 411 GAYLLALIGVVTSVISCFYYIRFVKIMYFDTPKTWILYKPMDREKSLLLA 460

ref|YP_006073022.1| nad2 gene product (mitochondrion) [Nitella hyalina]
gb|AEH42837.1| NADH dehydrogenase subunit 2 (mitochondrion) [Nitella hyalina]
(488 aa)

Score: 319 bits (817), Expect: 2.10641e-84
Length: 473, Idn/Pos/Gap = 182/285/24 (38%/60%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D     PE++L     +LLIYG+  ST+K Y YP L +N G+L +++    + L+IN P
Sbjct:   4 NDFLAIFPEIFLINATILLLIYGVILSTSKRYDYPPLVRNVGWLGLLSVLMTILLLINNP  63

Query:  68 DFLSTYFPSFFFFNN----SLKWIKTIFLLVGICYVFLVISN-ISLEKLNVFEFFLLFIL 122
             L+T   +  F+NN    +L +   IFLL G     L+  +    E LN FE  +L +L
Sbjct:  64 --LTT---ANLFYNNLIIDNLTYFCKIFLLFGTASTILMCFDYFKQESLNAFESMVLILL 118

Query: 123 SILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLL 182
           S  S+  +IS++DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LL
Sbjct: 119 STCSMLFMISSYDLIAMYLAIELQSLCFYVIAASKRNSEFSTEAGLKYFILGAFSSGILL 178

Query: 183 FGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTD-LLLGLVFISTAFFFKLSAAPFH 241
           FG ++IYG  G+TNF +L+        E +     +  + +G++FI+  F +K++A PFH
Sbjct: 179 FGCSMIYGFTGVTNFEELAKILTGY--EMTFFGTQSSGIFMGILFIAVGFLWKITAVPFH 236

Query: 242 MWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFN-VWQKLTLICAFFSLFL 300
           MW+PDVYEG+ T +   F I  KI +     N+    LF  ++  WQ +   C+  S+ L
Sbjct: 237 MWAPDVYEGSPTFVTAFFSITPKIAV---LANMLRVFLFSFYDPTWQTIFFFCSIASMIL 293

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G   A AQ K K+ LAYSSI HVG+++I  S     G  SL+  + IY+++ + +F  +L
Sbjct: 294 GALAAMAQNKVKKLLAYSSIGHVGYLLIGFSCGTIEGIQSLLIGVFIYVIMTINVFGIVL 353

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +LR  R        +YI++   L+ T+PI+A ++ I +FS++GIPP+AGF +K  +F   
Sbjct: 354 ALRQNR-------FKYIADLAALALTNPILAITMSITMFSLAGIPPLAGFCSKFYLFFAA 406

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
           L    Y L +  +  S ++ FYYIR +K++YF+    W+ Y PMD+ K+ +L+
Sbjct: 407 LGCGAYLLALIGVVTSVISCFYYIRFVKVMYFETPKTWIFYKPMDREKSLLLA 459

gb|ADT62143.1| NADH dehydrogenase subunit 2 [Isoetes engelmannii]
(487 aa)

Score: 317 bits (812), Expect: 8.70086e-84
Length: 462, Idn/Pos/Gap = 185/280/25 (40%/60%/5%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVIT-FTYILFLIINTP--DFLS  71
           PE+ LT T  ILLIYG+ +ST + Y YP L +N G+L +++    IL +  +TP   F +
Sbjct:  11 PEILLTNTTLILLIYGVVFSTYEKYDYPPLVRNVGWLGLLSVLITILLVAADTPMTAFQN  70

Query:  72 TYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
           T         + L +   IFLL+ +    ++  +  L   NVFE  +L   S  S+ L+I
Sbjct:  71 T------IIKDDLTYYGQIFLLLCMASTIVMCLDFKLSCSNVFETIVLIFFSTCSMLLMI 124

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  DL+ +Y+++E+ +L FYV+A  RR SEFSTEAGLKYFILG FS+G+LLFG ++IYG 
Sbjct: 125 SANDLMVMYLAIELQSLCFYVIAASRRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGL 184

Query: 192 IGITNFIDLSLFFQ----SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
            G+T+F +L+  F     ++   +S     + L LG++FI+  F FK++A PFHMW+PDV
Sbjct: 185 TGVTDFEELAKIFAGYEITLFSAQS-----SGLFLGILFIAVGFLFKITAVPFHMWAPDV 239

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFA 307
           YEG+ T +   F I  KI I    + +F  S  +  + WQ     C+  S+ LG   A A
Sbjct: 240 YEGSPTMVTAFFSIAPKIAILANMLRVFLYSFHD--STWQPFFYFCSIASMILGALAAMA 297

Query: 308 QTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRN 367
           Q K KR LAYSSI HVG++ I  S  +  G  SL+  + IY+L+ + +FA +L+LR   N
Sbjct: 298 QNKVKRLLAYSSIGHVGYLCIGFSCGSIEGIQSLLIGLSIYVLMTINVFAIVLTLRQKHN 357

Query: 368 YKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYS 427
                + +YI++   L+KT+P++  ++ I +FS +GIPP+AGF +K  +F   L    +S
Sbjct: 358 -----RFKYIADLGALAKTNPLLTLTLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAHS 412

Query: 428 LVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKA 469
           L +  +  S ++ FYYIR++KI+YFD   +W++Y PMD+ K+
Sbjct: 413 LALIGVVTSVISCFYYIRLVKIMYFDTPKIWILYEPMDREKS 454

gb|ABX82544.1| NADH dehydrogenase subunit 2 [Trebouxia aggregata]
(522 aa)

Score: 317 bits (812), Expect: 1.00268e-83
Length: 464, Idn/Pos/Gap = 186/280/5 (40%/60%/1%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PEL+L LT+ +LL+YG+  ST+K   YP+L  N G+  ++     L L+I  P      F
Sbjct:  34 PELFLVLTILLLLVYGVILSTSKEEKYPLLIGNIGWFGLLGIFLTLVLLIKNPLSHGLIF  93

Query:  75 PSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTF 134
            +    +   ++ K + L+     + + +  +  E LN FE  +L +LS  SI  +IS+ 
Sbjct:  94 YNTLIIDQETQFFKIVALVGAFFSILISLDYMKKEGLNGFEIIILTLLSTSSILFLISSA 153

Query: 135 DLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGI 194
           D LS+Y+++E  +L FYV+A  +R SEFSTEAGLKYF+LG FS+GLLLFG +LIYG  GI
Sbjct: 154 DFLSMYLAIEFQSLCFYVMAGSKRDSEFSTEAGLKYFLLGAFSSGLLLFGCSLIYGFTGI 213

Query: 195 TNFIDLSLFFQSIMKE-KSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
           TNF +L   F    +E  + L       LG++FI     FKL+A PFHMW+PDVYEG  T
Sbjct: 214 TNFTELGKLFTPGGQEVVTGLYSLRGCELGMIFILVGLLFKLTAVPFHMWAPDVYEGAPT 273

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
           SI   F I  KI+I  +FI +F    ++L   WQ + +  A  S+ LG   A +Q K KR
Sbjct: 274 SITAFFSITPKISILAVFIRVFLEGFYDLMIDWQTILIFSALASMILGAVAALSQNKIKR 333

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL--SLRNFRNYKFN 371
            LAYSSI HVG+++  +      G   L+ Y+++Y+L+ + IF  +L    R F N    
Sbjct: 334 LLAYSSIGHVGYLLAGLCCGTIEGIQGLLIYLVVYVLMTINIFGIILFPLRREFINSV-- 391

Query: 372 HQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIF 431
            +I+Y ++  +++KT+P++AF++ + +FSI+GIPP+AGF++K  +F   L S+LY L + 
Sbjct: 392 QRIKYTTDLGMMAKTNPVLAFTLTVSMFSIAGIPPLAGFYSKAFLFFAALSSNLYLLAVI 451

Query: 432 AITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFS 475
            +  S ++ FYYIR++KI+YF+N   WL +  + K  A V+  S
Sbjct: 452 GVLTSVVSCFYYIRVVKIMYFENPKNWLSFSQIPKESALVVGVS 495

ref|YP_006280870.1| nad2 gene product (mitochondrion) [Pyropia yezoensis]
gb|AFH57676.1| NADH dehydrogenase subunit 2 (mitochondrion) [Pyropia yezoensis]
(495 aa)

Score: 317 bits (812), Expect: 1.01109e-83
Length: 487, Idn/Pos/Gap = 191/307/5 (39%/63%/1%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
           D Y  + E+Y    +  LLIYG+  +T+   G+P++  N   L        L+L + +  
Sbjct:   8 DFYALLTEIYFLNAICALLIYGVILNTSYRRGHPVIEHNVSGLSTQILIVSLWLTVCSNI  67

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
              T + S    +     IK+  L + + +  ++ S   LEK+N++E++++ +L+I+++ 
Sbjct:  68 PCLTSWNSLLVHDFLSFGIKSTILAISLLWSLIIFSYNRLEKINLYEYWIVSMLAIVAML 127

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
            +  ++DLL++Y+++E  ++ FY+LA+ +RTSEFSTEAGLKYF+LG FS+ LLL GI+L+
Sbjct: 128 FVSCSYDLLAMYLAIEFQSIAFYILASFKRTSEFSTEAGLKYFVLGAFSSALLLLGISLL 187

Query: 189 YGCIGITNFIDLSLFF-QSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           YG  G+TNF DLS FF  + ++  S + I      G+V I  A FFK+SAAPFHMWSPDV
Sbjct: 188 YGTTGLTNFGDLSKFFLGTTLENASFINIT---FFGVVLIEVALFFKISAAPFHMWSPDV 244

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFA 307
           YEG  T++ + F I  K+ +  L    F     E+  +     +ICA  S+ +GTF A A
Sbjct: 245 YEGAPTNVTSFFGILPKLALVSLIFRFFYFCCAEVVLLLNFTLIICALLSMIIGTFGALA 304

Query: 308 QTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRN 367
           QTK+KRF+AYS+I+HVGFI+   S++ +NG +  +FY+++Y L +L  F+ +LS R    
Sbjct: 305 QTKWKRFIAYSTISHVGFIVAGFSTLEFNGAFGALFYILVYTLTSLATFSIVLSFRCLA- 363

Query: 368 YKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYS 427
           Y   +Q+RY+++   L K +PI+A S++ +LFS++GIPP  GFF K+ V  + L+  L  
Sbjct: 364 YPSTYQLRYLTDIVSLVKLNPILAGSLVAVLFSMAGIPPFPGFFAKVFVLFSLLQEQLIG 423

Query: 428 LVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPN 487
           L I AI +SC++ FYYIR+I+++YF +    LI+ P++K+ + +LS ++LLL    L  +
Sbjct: 424 LAIMAIFLSCVSCFYYIRLIQMMYFTHTKTILIFYPIEKTTSTILSITMLLLVLIFLKID 483

Query: 488 LIINSIY 494
           LI N ++
Sbjct: 484 LISNFVH 490

ref|NP_943686.1| NADH dehydrogenase subunit 2 [Chara vulgaris]
gb|AAP92177.1| NADH dehydrogenase subunit 2 [Chara vulgaris]
(486 aa)

Score: 316 bits (809), Expect: 2.21519e-83
Length: 473, Idn/Pos/Gap = 180/285/26 (38%/60%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D     PE++L     +LLIYG+  ST+K Y YP L +N G+L +++    + L+IN P
Sbjct:   4 NDFLAIFPEIFLINATILLLIYGVILSTSKRYDYPPLVRNVGWLGLLSVLMTILLLINNP  63

Query:  68 DFLSTYFPSFFFFNN----SLKWIKTIFLLVGICYVFLVISN-ISLEKLNVFEFFLLFIL 122
             L+T   +  F+NN    +L +   IFLL G     L+  +    E LN FE  +L +L
Sbjct:  64 --LTT---ANLFYNNLIIDNLTYFCKIFLLFGTASTILMCFDYFKQETLNAFESMVLILL 118

Query: 123 SILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLL 182
           S  S+  +IS++DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKYFILG FS+G+ L
Sbjct: 119 STCSMLFMISSYDLIAMYLAIELQSLCFYVIAASKRNSEFSTEAGLKYFILGAFSSGIFL 178

Query: 183 FGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTD-LLLGLVFISTAFFFKLSAAPFH 241
           FG ++IYG  G+TNF +L+        E +     +  + +G++FI+  F +K++A PFH
Sbjct: 179 FGCSMIYGFTGVTNFEELAKILTGY--EMTFFGTQSSGIFMGILFIAVGFLWKITAVPFH 236

Query: 242 MWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFN-VWQKLTLICAFFSLFL 300
           MW+PDVYEG+ T +   F I  KI +     N+    LF  ++  WQ +   C+  S+ L
Sbjct: 237 MWAPDVYEGSPTFVTAFFSITPKIAV---LANMLRVFLFSFYDPTWQTIFFFCSIASMIL 293

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G   A AQ K K+ LAYSSI HVG+++I  S     G  SL+  + IY+++ + +F  +L
Sbjct: 294 GALAAMAQNKVKKLLAYSSIGHVGYLLIGFSCGTIEGIQSLLIGVFIYVIMTINVFGIVL 353

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +LR         +++YI++   L+ T+PI+A ++ I +FS++GIPP+AGF +K  +F   
Sbjct: 354 ALR---------RLKYIADLAALALTNPILAITMSITMFSLAGIPPLAGFCSKFYLFFAA 404

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
           L    Y L +  +  S ++ FYYIR +K++YF+    W+ Y PMD+ K+ +L+
Sbjct: 405 LGCGAYLLALIGVVTSVISCFYYIRFVKVMYFETPKTWIFYKPMDREKSLLLA 457

gb|ADG85359.1| NADH dehydrogenase subunit 2 [Silene noctiflora]
(488 aa)

Score: 315 bits (808), Expect: 2.29037e-83
Length: 487, Idn/Pos/Gap = 188/287/37 (38%/58%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE++L    F+LLI+G+ +ST+K   YP L  N G+L +++    L L+  +     +  
Sbjct:  10 PEIFLINATFLLLIHGVVFSTSKRVDYPPLVSNVGWLGLLSVLITLLLLAASAPLLTIGH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   IFLL      + +C+ F        E+ + FEF +L +LS  S
Sbjct:  70 LFWNTFFKRDNFTYFCQIFLLLSTAGTISMCFDFF-----EAERFDAFEFIVLILLSTSS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS +DL+++Y+++E+ +L FYVLA  +R SEFSTEAGLKY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAYDLIAMYLAIELQSLCFYVLAASKRKSEFSTEAGLKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTD-LLLGLVFISTAFFFKLSAAPFHMWSP 245
           +IYG  G T+F  L+     I+    I  + +  L +G++FI+  F FK++A PFHMW+P
Sbjct: 185 MIYGSTGATHFDQLA----KILTGYEITGLQSSGLFMGMIFIAVGFLFKITAVPFHMWAP 240

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLFL 300
           D+YEG+ T +   F +  KI +F   + LF     G +L E+F         C+  S+ L
Sbjct: 241 DIYEGSPTPVTAFFSVAPKIALFANLLRLFLYGSYGATLQEIF-------FFCSISSMIL 293

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G   A AQTK KR LAYSSI HVG+I I VS     G  +L+  + IY L+ +  FA LL
Sbjct: 294 GGLAALAQTKVKRLLAYSSIGHVGYICIGVSCGTIEGIQALLIALFIYALMTIDAFAILL 353

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +LR         +++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   
Sbjct: 354 ALR-------QSKLKYIADLGALAKTNPILAITFAITMFSYAGIPPLAGFGSKFYLFFAA 406

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           L    Y L +  I  S +  FYYIR++K I+FD    W++Y PMD++K+ +L+ +   +T
Sbjct: 407 LSCGAYFLALVGIITSVIGCFYYIRLVKRIFFDTPKTWILYQPMDRNKSLLLAMTSSFIT 466

Query: 481 FFCLNPN 487
            F L P+
Sbjct: 467 LFFLYPS 473

ref|NP_049304.1| NADH dehydrogenase subunit 2 [Porphyra purpurea]
gb|AAD03107.1| NADH dehydrogenase subunit 2 [Porphyra purpurea]
(495 aa)

Score: 315 bits (808), Expect: 2.38794e-83
Length: 488, Idn/Pos/Gap = 197/298/13 (40%/61%/2%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLII--NT  66
           D Y  + E+YL  +V  LLIYG+  +T+   G PIL  N G          L+L    N 
Sbjct:   8 DFYALLTEIYLLNSVCALLIYGVILNTSSKRGAPILDYNIGGFATQITVIGLWLAFSSNV  67

Query:  67 PDFLS---TYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILS 123
           P  +S        F  F      +K   L+  + ++ +V S    EK+N +E++++ +L+
Sbjct:  68 PHIVSWNALLCHDFLSFG-----LKNTLLVTALFWILIVFSYNKAEKVNFYEYWIIAMLA 122

Query: 124 ILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLF 183
           I+++ LI S+FD L +Y+++E  ++ FY+LA+ +RTSEFSTEAGLKYF+LG FS+ LLL 
Sbjct: 123 IVAMLLISSSFDFLVLYLAIEFQSIAFYILASFKRTSEFSTEAGLKYFVLGAFSSALLLL 182

Query: 184 GIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMW 243
           GI+L+YG  G+TNF DLS FF  I   K+   I    +L +V I  +  FK+SAAPFHMW
Sbjct: 183 GISLLYGTTGLTNFGDLSKFFLGISATKA--SIVNTTILSIVLIEVSLLFKVSAAPFHMW 240

Query: 244 SPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTF 303
           SPDVYEG  T++ + F I  K+ +  +   +F     E+  +     ++CA  S+ +GTF
Sbjct: 241 SPDVYEGAPTNVTSFFGILPKLALVGIMFRIFFLCCEEIAQMLNFTLVVCALSSMVVGTF 300

Query: 304 IAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR 363
            A  Q K+KRF+AYS+I+HVGFI+   S+  + G +  IFY++IY L +L IF+ +LSLR
Sbjct: 301 GALEQVKWKRFIAYSTISHVGFIIAGFSTTEFAGAFGAIFYILIYTLTSLAIFSIVLSLR 360

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
           +  +Y   +Q RY+ +   L K +P+++  ++ ILFS++GIPP  GFF K  V L  L+ 
Sbjct: 361 SI-SYPTAYQSRYLKDIAGLVKLNPMLSICLVGILFSMAGIPPFPGFFAKAFVLLALLQK 419

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFC 483
            L  L I AI +SC++ FYYIR+I+ +YF +  V  ++ P++K K+ V+S S+LLL    
Sbjct: 420 KLSGLAIVAIILSCISCFYYIRLIQTMYFTDTKVLGVFYPIEKEKSIVISLSMLLLVVSF 479

Query: 484 LNPNLIIN 491
           +  +LI N
Sbjct: 480 IKIDLISN 487

gb|ADG85358.1| NADH dehydrogenase subunit 2 [Silene latifolia]
(488 aa)

Score: 313 bits (801), Expect: 1.56079e-82
Length: 487, Idn/Pos/Gap = 185/288/37 (37%/59%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   IFLL      + +C+ F        E+ + FEF +L +LS  S
Sbjct:  70 LFWNNFFKRDNFTYFCQIFLLLSTAGTISMCFDFF-----EQERFDAFEFIVLILLSTCS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEI-PTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +IYG  G T+F  L+     I+    I  +  + + +G++FI+  F FK++A PFHMW+P
Sbjct: 185 MIYGSTGATHFDQLA----KILTGYEITGVRSSGIFMGILFIAVGFLFKITAVPFHMWAP 240

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLFL 300
           D+YEG+ T +   F I  KI+IF   + +F     G +L       Q++   C+  S+ L
Sbjct: 241 DIYEGSPTPVTAFFSIAPKISIFANILRVFIYGSYGATL-------QQIFFFCSIASMIL 293

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G   A AQTK KR LAYSSI HVG+I I  S     G  SL+  + IY L+ +  FA +L
Sbjct: 294 GALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGLFIYALMTIDAFAIVL 353

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +LR  R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   
Sbjct: 354 ALRQTR-------VKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAA 406

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           L    Y L +  +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +   +T
Sbjct: 407 LGCGAYFLALVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSSFIT 466

Query: 481 FFCLNPN 487
            F L P+
Sbjct: 467 LFFLYPS 473

sp|O05000.2|NU2M_ARATH RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName: Full=NADH dehydrogenase subunit 2
(499 aa)

Score: 311 bits (797), Expect: 4.42893e-82
Length: 490, Idn/Pos/Gap = 183/285/43 (37%/58%/8%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE+++    FILLI+G+ +ST+K Y YP L+ N G+L +++    L L+      L+   
Sbjct:  21 PEIFIINATFILLIHGVVFSTSKKYDYPPLASNVGWLGLLSVLITLLLLAAGAPLLTI--  78

Query:  75 PSFFFFNNSLKWIKTIFLLVGICYVFLVISNIS----------LEKLNVFEFFLLFILSI 124
            +  F+NN  +     +     C +FL++S              E+ + FEF +L +LS 
Sbjct:  79 -AHLFWNNLFRRDNFTYF----CQIFLLLSTAGTISMCFDFFDQERFDAFEFIVLILLST 133

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
             +  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG
Sbjct: 134 CGMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLFG 193

Query: 185 IALIYGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHM 242
            ++IYG  G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PFHM
Sbjct: 194 CSMIYGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGFLFKITAVPFHM 248

Query: 243 WSPDVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFS 297
           W+PD+YEG+ T +     I  KI+IF   + +F     G +L       Q++   C+  S
Sbjct: 249 WAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATL-------QQIFFFCSIAS 301

Query: 298 LFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFA 357
           + LG   A AQTK KR LAYSSI HVG+I I  S     G  SL+  + IY L+ +  FA
Sbjct: 302 MILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTMDAFA 361

Query: 358 SLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVF 417
            +L+LR  R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F
Sbjct: 362 IVLALRQTR-------VKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLF 414

Query: 418 LTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVL 477
              L    Y L +  +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +  
Sbjct: 415 FAALGCGAYFLALVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSF 474

Query: 478 LLTFFCLNPN 487
            +T F L P+
Sbjct: 475 FITLFLLYPS 484

ref|YP_717099.1| NADH dehydrogenase subunit 2 [Brassica napus]
dbj|BAC98925.1| NADH dehydrogenase subunit 2 [Brassica napus]
(488 aa)

Score: 311 bits (797), Expect: 5.14665e-82
Length: 490, Idn/Pos/Gap = 185/288/43 (37%/58%/8%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE+++    FILLI+G+ +ST+K Y YP L+ N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLASNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLKWIKTIFLLVGICYVFLVISN---ISL-------EKLNVFEFFLLFILSI 124
            +  F+NN  +     +     C +FL++S    IS+       E+ + FEF +L +LS 
Sbjct:  68 -AHLFWNNLFRRDNFTYF----CQIFLLLSTAGTISMCFDFFDQERFDAFEFIVLILLST 122

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
             +  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG
Sbjct: 123 CGMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLFG 182

Query: 185 IALIYGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHM 242
            ++IYG  G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PFHM
Sbjct: 183 CSMIYGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGFLFKITAVPFHM 237

Query: 243 WSPDVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFS 297
           W+PD+YEG+ T +     I  KI+IF   + +F     G +L       Q++   C+  S
Sbjct: 238 WAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATL-------QQIFFFCSIAS 290

Query: 298 LFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFA 357
           + LG   A AQTK KR LAYSSI HVG+I I  S     G  SL+  + IY L+ +  FA
Sbjct: 291 MILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTMDAFA 350

Query: 358 SLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVF 417
            +L+LR  R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F
Sbjct: 351 IVLALRQTR-------VKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLF 403

Query: 418 LTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVL 477
              L    Y L +  +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +  
Sbjct: 404 FAALGCGAYFLALVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSF 463

Query: 478 LLTFFCLNPN 487
            +T F L P+
Sbjct: 464 FITLFLLYPS 473

emb|CBX33211.1| NADH dehydrogenase subunit 2 (mitochondrion) [Beta vulgaris subsp. maritima]
emb|CBL54111.1| NADH dehydrogenase subunit 2 (mitochondrion) [Beta vulgaris subsp. maritima]
(488 aa)

Score: 311 bits (797), Expect: 5.50191e-82
Length: 487, Idn/Pos/Gap = 185/285/37 (37%/58%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE++L    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFLINATFILLIHGVIFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   I LL      + +C+ F        E+ + FEF +L +LS  S
Sbjct:  70 LFWNNFFKRDNFTYFCQILLLLSTAGTISMCFDFF-----EQERFDAFEFIVLILLSTCS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEI-PTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +IYG  G T+F  L+     I+    I  +  + + +G++FI+  F FK++A PFHMW+P
Sbjct: 185 MIYGSTGATHFDQLA----KILTGYEITGVRSSGIFMGILFIAVGFLFKITAVPFHMWAP 240

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLFL 300
           D+YEG+ T +   F I  KI+IF   + +F     G +L       Q++   C+  S+ L
Sbjct: 241 DIYEGSPTPVTAFFSIAPKISIFANILRVFIYGSYGATL-------QQIFFFCSIASMIL 293

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G   A AQTK KR LAYSSI HVG+I I  S     G  SL+  + IY L+ +  FA +L
Sbjct: 294 GALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGLFIYALMTIDAFAIVL 353

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +LR  R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   
Sbjct: 354 ALRQTR-------VKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAA 406

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           L    Y L    +  S +  FYYIR++K ++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 407 LGCGAYFLASVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFIT 466

Query: 481 FFCLNPN 487
            F L P+
Sbjct: 467 LFFLYPS 473

ref|NP_064064.2| nad2 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
ref|YP_004222260.1| NADH dehydrogenase subunit 2 [Beta vulgaris subsp. maritima]
ref|YP_004842067.1| NADH dehydrogenase subunit 2 [Beta macrocarpa]
gb|ABD36071.1| NADH dehydrogenase subunit 2 [Beta vulgaris subsp. vulgaris]
dbj|BAA99456.2| NADH dehydrogenase subunit 2 [Beta vulgaris subsp. vulgaris]
emb|CBJ13993.1| NADH dehydrogenase subunit 2 [Beta vulgaris subsp. maritima]
emb|CBJ17481.1| NADH dehydrogenase subunit 2 [Beta vulgaris subsp. maritima]
emb|CBJ20660.1| NADH dehydrogenase subunit 2 [Beta vulgaris subsp. maritima]
emb|CBX24852.1| NADH dehydrogenase subunit 2 [Beta macrocarpa]
(488 aa)

Score: 311 bits (796), Expect: 6.61049e-82
Length: 487, Idn/Pos/Gap = 185/285/37 (37%/58%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE++L    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFLINATFILLIHGVIFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   I LL      + +C+ F        E+ + FEF +L +LS  S
Sbjct:  70 LFWNNFFKRDNFTYFCQILLLLSTAGTISMCFDFF-----EQERFDAFEFIVLILLSTCS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEI-PTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +IYG  G T+F  L+     I+    I  +  + + +G++FI+  F FK++A PFHMW+P
Sbjct: 185 MIYGSTGATHFDQLA----KILTGYEITGVRSSGIFMGILFIAVGFLFKITAVPFHMWAP 240

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLFL 300
           D+YEG+ T +   F I  KI+IF   + +F     G +L       Q++   C+  S+ L
Sbjct: 241 DIYEGSPTPVTAFFSIAPKISIFANILRVFIYGSYGATL-------QQIFFFCSIASMIL 293

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G   A AQTK KR LAYSSI HVG+I I  S     G  SL+  + IY L+ +  FA +L
Sbjct: 294 GALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGLFIYALMTIDAFAIVL 353

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +LR  R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   
Sbjct: 354 ALRQTR-------VKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAA 406

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           L    Y L    +  S +  FYYIR++K ++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 407 LGCGAYFLASVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFIT 466

Query: 481 FFCLNPN 487
            F L P+
Sbjct: 467 LFFLYPS 473

ref|YP_003587227.1| NADH dehydrogenase subunit 2 [Citrullus lanatus]
gb|ACV96633.1| NADH dehydrogenase subunit 2 [Citrullus lanatus]
(488 aa)

Score: 309 bits (791), Expect: 2.38932e-81
Length: 490, Idn/Pos/Gap = 184/283/43 (37%/57%/8%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLKWIKTIFLLVGICYVFLVISNIS----------LEKLNVFEFFLLFILSI 124
            +  F+NN  +     +     C + L++S              E+ + FEF +L +LS 
Sbjct:  68 -AHLFWNNLFRRDNFTYF----CQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLST 122

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
            S+  +IS +DL+S+Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG
Sbjct: 123 CSMLFMISAYDLISMYLAIELQSLCFYVMAASKRKSEFSTEAGLKYLILGAFSSGILLFG 182

Query: 185 IALIYGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHM 242
            ++IYG  G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PFHM
Sbjct: 183 CSMIYGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGFLFKITAVPFHM 237

Query: 243 WSPDVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFS 297
           W+PD+YEG+ T +     I  KI+IF   + +F     G +L       Q++   C+  S
Sbjct: 238 WAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATL-------QQIFFFCSIAS 290

Query: 298 LFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFA 357
           + LG   A AQTK KR LAYSSI HVG+I I  S     G  SL+  + IY+L+ +  FA
Sbjct: 291 MILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYVLMTIDAFA 350

Query: 358 SLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVF 417
            +L+LR  R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F
Sbjct: 351 IVLALRQTR-------VKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLF 403

Query: 418 LTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVL 477
              L    Y L    +  S +  FYYIR++K ++FD    W++Y PMD+ K+ +L+ +  
Sbjct: 404 FAALGCGAYFLASVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSS 463

Query: 478 LLTFFCLNPN 487
            +T F L P+
Sbjct: 464 FITLFFLYPS 473

ref|YP_003587345.1| NADH dehydrogenase subunit 2 [Cucurbita pepo]
gb|ACV96678.1| NADH dehydrogenase subunit 2 [Cucurbita pepo]
(488 aa)

Score: 309 bits (791), Expect: 2.73057e-81
Length: 488, Idn/Pos/Gap = 185/284/39 (37%/58%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F +  F  ++L +   I LL      + +C+ F        E+ + FEF +L +LS  S
Sbjct:  70 LFWNNLFRRDNLTYFCQILLLLSTAGTISMCFDFF-----EQERFDAFEFIVLILLSTCS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS +DL+S+Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAYDLISMYLAIELQSLCFYVMAASKRKSEFSTEAGLKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           +IYG  G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PFHMW+
Sbjct: 185 MIYGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGFLFKITAVPFHMWA 239

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLF 299
           PD+YEG+ T +     I  KI+IF   + LF     G +L       Q++   C+  S+ 
Sbjct: 240 PDIYEGSPTPVTAFLSIAPKISIFANILRLFIYGSYGATL-------QQIFFFCSIASMI 292

Query: 300 LGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASL 359
           LG   A AQTK KR LAYSSI HVG+I I  S     G  SL+  + IY+ + +  FA +
Sbjct: 293 LGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYVFMTIDAFAIV 352

Query: 360 LSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLT 419
           L+LR  R       ++Y+++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F  
Sbjct: 353 LALRQTR-------VKYLADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFA 405

Query: 420 CLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLL 479
            L    Y L    +  S +  FYYIR++KI++FD    W++Y PMD+ K+ +L+     +
Sbjct: 406 ALGCGAYFLASVGVVTSVIGCFYYIRLVKIMFFDTPRTWILYEPMDRDKSLLLAMISSFI 465

Query: 480 TFFCLNPN 487
           T F L P+
Sbjct: 466 TLFFLYPS 473

dbj|BAD83439.2| NADH dehydrogenase subunit 2 (mitochondrion) [Nicotiana tabacum]
(488 aa)

Score: 308 bits (789), Expect: 4.3569e-81
Length: 483, Idn/Pos/Gap = 180/280/29 (37%/57%/6%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYL---VVITFTYILFLIINTPDFLS  71
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L    V+    +L           
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  72 TYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            ++ +FF  +N   + + + LL     + +  +    E+ + FEF +L +LS   +  +I
Sbjct:  70 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFNFFEQERFDAFEFIVLILLSTCGMLFMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG ++IYG 
Sbjct: 130 SAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           G+ T +     I  KI+IF   + +F     G +L       Q++   C+  S+ LG   
Sbjct: 245 GSPTPVTAFLSIAPKISIFANILRVFIYGSYGATL-------QQIFFFCSIASMILGALA 297

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A AQTK KR LAYSSI HVG+I I  S     G  SL+  + IY L+ +  FA +L+LR 
Sbjct: 298 AMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQ 357

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   L   
Sbjct: 358 TR-------VKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCG 410

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCL 484
            Y L +  +  S +  FYYIR++K ++FD    W++Y PMD+ K+ +L+ +   +T F L
Sbjct: 411 AYFLALVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFL 470

Query: 485 NPN 487
            P+
Sbjct: 471 YPS 473

ref|YP_002860279.1| NADH dehydrogenase subunit 2 [Megaceros aenigmaticus]
gb|ACC86802.1| NADH dehydrogenase subunit 2 [Nothoceros aenigmaticus]
(487 aa)

Score: 307 bits (786), Expect: 9.78748e-81
Length: 483, Idn/Pos/Gap = 181/277/19 (37%/57%/3%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
           D     PE++L      LLIYG+  ST++ Y YP L  N G+L   +   I  L++    
Sbjct:   5 DFLALFPEIFLINATITLLIYGVVLSTSERYDYPPLVCNVGWLGSPS-VLITILLVAAGA  63

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            ++  F +    +N   + +    L     + + +     E LN FEF +L +  I S+ 
Sbjct:  64 LVANLFYNNLIIDNFTYFCQIFPSLSTASTILMCLDYFKEESLNAFEFIILILPPIRSMP 123

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L I  +D +++Y ++E  +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++I
Sbjct: 124 LTILAYDSIAMYSAIEPQSLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMI 183

Query: 189 YGCIGITNFIDLSLFFQ----SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           +G  G+TNF +L+  F     ++   +S     + + +G++FI+  F FK++A PFHMW+
Sbjct: 184 HGFTGVTNFEELAKIFTGYEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWA 238

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG+ T +   F I  KI+I    + +F  S ++    WQ+L   C+  S+ LG   
Sbjct: 239 PDVYEGSPTLVTAFFPIAPKISILANMLRVFIYSFYD--PTWQQLFFFCSIASMILGALA 296

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A AQ K KR LAYSSI HVG++ I  S     G  SL+  M IY+L+ + +F  +L+LR 
Sbjct: 297 AMAQNKVKRLLAYSSIGHVGYLPIGFSCGTIEGIQSLLIAMFIYVLMTINVFVIVLALRQ 356

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            R       ++YI++   L+KT+ I+A ++ I +FS +GIPP+AGF +K  +F       
Sbjct: 357 NR-------LKYIADLGALAKTNRILAITLPITMFSYAGIPPLAGFCSKFYLFSAAPGCG 409

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCL 484
            YSL    I  S ++ F+YIR +KI+YFD    W+IY PMD+ K+ +L+ ++   T F L
Sbjct: 410 AYSLAFVGIVTSVISCFHYIRFVKIMYFDTPETWIIYKPMDREKSLLLAITLFPTTSFFL 469

Query: 485 NPN 487
            P+
Sbjct: 470 YPS 472

ref|YP_004935280.1| NADH dehydrogenase subunit 2 (mitochondrion) [Silene conica]
gb|AEO21067.1| NADH dehydrogenase subunit 2 (mitochondrion) [Silene conica]
(488 aa)

Score: 307 bits (786), Expect: 1.03762e-80
Length: 489, Idn/Pos/Gap = 187/280/41 (38%/57%/8%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE++L    FILLI+G+ +ST+K Y YP L  N G+L +++    L LI      L+   
Sbjct:  10 PEIFLINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLIAAGAPLLTI--  67

Query:  75 PSFFFFNNSLK-----WIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILS 123
            +  F+NN LK     +   IFLL      + +C+ F        E+ + FEF +L  LS
Sbjct:  68 -ASLFWNNFLKRDNFTYFCQIFLLLSTAGTISMCFAFF-----EQERFDAFEFIVLISLS 121

Query: 124 ILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLF 183
             S+  +IS  DL++IY+++E+ +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLF
Sbjct: 122 TRSMLFMISAHDLIAIYLAIELQSLCFYVIAASKRKSEFSTEAGSKYLILGAFSSGILLF 181

Query: 184 GIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMW 243
           G +LIYG  G T+F  L+    S   E + L   + L +G++F++  F FK++A PFHMW
Sbjct: 182 GCSLIYGSTGATHFDQLAKILTSW--EMTGLR-SSGLFMGMIFLAVGFLFKITAVPFHMW 238

Query: 244 SPDVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSL 298
           +PD+YEG+ T +   F +  KI I    + LF     G +L E+F         C+  S+
Sbjct: 239 APDIYEGSPTPVTAFFSVAPKIAISAAILRLFIYGSYGATLQEIF-------FFCSIGSM 291

Query: 299 FLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFAS 358
            LG   A +QTK KR LA+SSI HVG+I    S     G  +L+  + IY  + L  FA 
Sbjct: 292 ILGALAALSQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQALLIALFIYASMTLDAFAI 351

Query: 359 LLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFL 418
           + +LR  R       ++Y+++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F 
Sbjct: 352 VSALRQSR-------LKYLADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFSLFF 404

Query: 419 TCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLL 478
             L S  Y L    I  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +   
Sbjct: 405 AALGSGAYLLASVGIVTSVIGCFYYIRLVKRMFFDKPRTWILYEPMDRNKSLLLAITSFF 464

Query: 479 LTFFCLNPN 487
           +T   L P+
Sbjct: 465 ITSSFLYPS 473

emb|CAA74779.1| NADH dehydrogenase subunit 2 [Triticum aestivum]
(488 aa)

Score: 306 bits (785), Expect: 1.08182e-80
Length: 483, Idn/Pos/Gap = 181/283/29 (37%/58%/6%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++    FILLI+G+ +ST+K   YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   I LL      + +C+ F        E+ + FEF +L +LS  S
Sbjct:  70 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFF-----EKERFDAFEFIVLILLSTCS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           + L+IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG +
Sbjct: 125 MLLMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           +IYG  G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PFHMW+
Sbjct: 185 MIYGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGFLFKITAVPFHMWA 239

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PD+YEG+ T +     I  KI+IF   + +F  + +      Q++   C+  S+ LG   
Sbjct: 240 PDIYEGSPTPVTAFLSIAPKISIFANMLRVFIVASYG--GTLQQIFFFCSIASMILGALA 297

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A AQTK KR LAYSSI HVG+I I  S     G  SL+  + IY L+ +  FA +L+LR 
Sbjct: 298 AMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQ 357

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   L   
Sbjct: 358 TR-------VKYIADLGALAKTNPILAMTFSITMFSYAGIPPLAGFCSKFYLFFAALGCG 410

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCL 484
            Y L +  +  S +  FYYIR++K ++FD    W++Y PMD+ K+ +L+ +   +  F L
Sbjct: 411 AYFLALVGVVTSVIGCFYYIRLVKRMFFDRPRTWILYEPMDRDKSLLLAMTSSFIILFFL 470

Query: 485 NPN 487
            P+
Sbjct: 471 YPS 473

ref|YP_005090433.1| NADH dehydrogenase subunit 2 (mitochondrion) [Millettia pinnata]
gb|AET62893.1| NADH dehydrogenase subunit 2 (mitochondrion) [Millettia pinnata]
(488 aa)

Score: 305 bits (781), Expect: 3.14761e-80
Length: 488, Idn/Pos/Gap = 183/282/39 (37%/57%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F +  F  ++  +   I LL      + +C+ F        E+ + FEF +L +LS  S
Sbjct:  70 LFRNNLFRRDNFTYFCQILLLLSTAGTISMCFDFF-----EQERFDAFEFIVLILLSTCS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAYDLIAMYLAIELQSLCFYVMAASKRKSEFSTEAGLKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           +IYG  G T+F  L+  L    I   +S     + + LG++FI+    FK++A PFHMW+
Sbjct: 185 MIYGSTGATHFDQLAKILTGYEITGARS-----SGIFLGILFIAVGSLFKITAVPFHMWA 239

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLF 299
           PD+YEG+ T +     I  KI+IF   + +F     G +L       Q++   C+  S+ 
Sbjct: 240 PDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATL-------QQIFCFCSIASMI 292

Query: 300 LGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASL 359
           LG   A AQTK KR LAYSSI HVG+I I  S     G  SL+  ++IY L+ +  FA +
Sbjct: 293 LGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGILIYALMTIDAFAIV 352

Query: 360 LSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLT 419
           L+LR  R       ++YI++   L+KT+PI+A +  I +FS  GIPP+AGF +K  +F  
Sbjct: 353 LALRQTR-------VKYIADLGALAKTNPILAITFSITMFSYVGIPPLAGFCSKFYLFFA 405

Query: 420 CLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLL 479
            L    Y L    +  S +  FYYIR++K ++FD    W++Y PMD+ K+ +L+ +   +
Sbjct: 406 ALGCGAYFLASVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFI 465

Query: 480 TFFCLNPN 487
           T F L P+
Sbjct: 466 TLFFLYPS 473

sp|P93401.2|NU2M_OENBE RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName: Full=NADH dehydrogenase subunit 2
(488 aa)

Score: 305 bits (781), Expect: 3.2817e-80
Length: 488, Idn/Pos/Gap = 184/283/39 (37%/57%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++    FILLI+G+ +ST+K   YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   I LL      + +C+ F        E+ + FEF +L +LS  S
Sbjct:  70 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFF-----EQERFDAFEFIVLILLSTCS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS +DL+++Y+++E+ +L FYVLA  +R SEFSTEAGLKY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAYDLIAMYLAIELQSLCFYVLAASKRKSEFSTEAGLKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           +IYG  G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PFHMW+
Sbjct: 185 MIYGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGFLFKITAVPFHMWA 239

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLF 299
           PD+YEG+ T +     I  KI+IF   + +F     G +L       Q++   C+  S+ 
Sbjct: 240 PDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATL-------QQIFFFCSIASMI 292

Query: 300 LGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASL 359
           LG   A AQTK KR LAYSSI HVG+I I  S     G  SL+  + IY L  +  FA +
Sbjct: 293 LGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGLFIYALTTINAFAIV 352

Query: 360 LSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLT 419
           L+LR  R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F  
Sbjct: 353 LALRQTR-------VKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFA 405

Query: 420 CLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLL 479
            L    Y L    +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +   +
Sbjct: 406 ALGCGAYFLASVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSSFI 465

Query: 480 TFFCLNPN 487
           T F L P+
Sbjct: 466 TLFFLYPS 473

ref|YP_005090477.1| NADH dehydrogenase subunit 2 (mitochondrion) [Lotus japonicus]
gb|AET62937.1| NADH dehydrogenase subunit 2 (mitochondrion) [Lotus japonicus]
(488 aa)

Score: 305 bits (781), Expect: 3.42151e-80
Length: 488, Idn/Pos/Gap = 183/280/39 (37%/57%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYL--VVITFTYILFLIINTPDFLST  72
           PE++L    FILLI+G+ +ST+K Y YP L  N G+L  + +  T +L         ++ 
Sbjct:  10 PEIFLINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F +  F  ++  +   I LL      + +C+ F        E+ + FEF +L +LS  S
Sbjct:  70 LFRNNLFRRDNFTYFCQILLLLSTAGTISMCFDFF-----EQERFDAFEFIVLILLSTCS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAYDLIAMYLAIELQSLCFYVMAASKRKSEFSTEAGLKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           +IYG  G T+F  L+  L    I   +S     + + +G++FI+    FK++A PFHMW+
Sbjct: 185 MIYGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGSLFKITAVPFHMWA 239

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLF 299
           PD+YEG+ T +     I  KI+IF   + +F     G +L       Q++   C+  S+ 
Sbjct: 240 PDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATL-------QQIFCFCSIASMI 292

Query: 300 LGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASL 359
           LG   A AQTK KR LAYSSI HVG+I I  S     G  SL+  ++IY L  +  FA +
Sbjct: 293 LGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGILIYALTTIDAFAIV 352

Query: 360 LSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLT 419
           L+LR  R       ++YI++   L+KT+PI+A +  I +FS  GIPP+AGF +K  +F  
Sbjct: 353 LALRQTR-------VKYIADLGALAKTNPILAITFSITMFSYVGIPPLAGFCSKFYLFFA 405

Query: 420 CLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLL 479
            L    Y L    +  S +  FYYIR++K ++FD    W++Y PMD+ K+ +L+ +   +
Sbjct: 406 ALGCGAYFLASVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFI 465

Query: 480 TFFCLNPN 487
           T F L P+
Sbjct: 466 TLFFLYPS 473

ref|YP_004339029.1| NADH dehydrogenase subunit 2 [Coccomyxa subellipsoidea C-169]
gb|ADY75471.1| NADH dehydrogenase subunit 2 [Coccomyxa subellipsoidea C-169]
(572 aa)

Score: 304 bits (778), Expect: 8.21675e-80
Length: 523, Idn/Pos/Gap = 186/287/52 (35%/54%/9%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D     PEL+L L    LLIYG+ ++T+   GYP+L +N  +L ++T      +  N+P
Sbjct:  30 NDFKAVFPELFLVLASLFLLIYGVVWTTSASTGYPLLLRNVNWLALLTLLLTAMIAANSP  89

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
                +F   F  ++   + K + ++  +  + + +  +  E +N FEF LL +LS  S+
Sbjct:  90 IGHGVFFYHTFLLDDVTFFFKMLVVVGALSSLLISLDYLERESVNGFEFALLLLLSTSSM 149

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
             +IS  D +S+Y+++E+ +L FYVLA  +R SEFSTEAGLKYF+LGVFS+GLLLFG +L
Sbjct: 150 LFLISAADFISMYLAIELQSLCFYVLAAFKRDSEFSTEAGLKYFLLGVFSSGLLLFGCSL 209

Query: 188 IYGCIGITNFIDLSLFFQSIMK----------------------EKSILEIPTDLL---- 221
           IYG  G+  F +LS  F S+                        E S L+ P+       
Sbjct: 210 IYGFTGVIEFSELSKVFASLASSGEVYSDKVDLVQASQAFGASLEGSPLQPPSAGGGDGH 269

Query: 222 -----------------LGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTK 264
                            LG++F+   F FKL+A PFHMW+PDVYEG  T++   F I  K
Sbjct: 270 LAGGGSLVSTSSWRGCELGMIFLLIGFLFKLTAVPFHMWAPDVYEGAPTAVTAFFSITPK 329

Query: 265 ITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVG 324
             +  +F  L   S ++    WQ   + C+  S+ LG+F   AQ + KR LAYSSI HVG
Sbjct: 330 PALLVVFARLLYQSFYDFMIEWQTFLIFCSVASMVLGSFAGLAQHRIKRLLAYSSIGHVG 389

Query: 325 FIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLS-LRNFRNYKFNHQ----IRYISE 379
           +++I+       G   L  Y++IYI++ + IFA +++ LR   +     Q    I+Y ++
Sbjct: 390 YLLISFCCGTLEGLQGLAIYLVIYIVVTVNIFAVVMTPLRRASHSAQQQQGVERIKYTTD 449

Query: 380 FTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLA 439
             +L+K +P++A ++ + +FS++GIPP+AGF+ K  +F   L SS Y L +  I  S ++
Sbjct: 450 LAMLAKNNPLLAATLTVSVFSLAGIPPLAGFYGKAFLFWAALSSSQYLLALVGILTSAIS 509

Query: 440 TFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFF 482
            FYYIRI+KI+YF+    WL +  + K  + VL+    L TFF
Sbjct: 510 CFYYIRIVKIMYFEAPQNWLSFSRLSKESSLVLA----LTTFF 548

ref|ZP_02187176.1| Proton-translocating NADH-quinone oxidoreductase, chain N [alpha proteobacterium BAL199]
gb|EDP66358.1| Proton-translocating NADH-quinone oxidoreductase, chain N [alpha proteobacterium BAL199]
(483 aa)

Score: 302 bits (774), Expect: 2.21776e-79
Length: 466, Idn/Pos/Gap = 161/267/24 (34%/57%/5%)

Query:   1 MVIIINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYIL  60
           M  + ++ ++     E++L +    LL++G+F  +N         +  G+L V+ F    
Sbjct:   1 MNAVTSLPEMAPATAEIFLAVAGIALLMFGVFRGSNSL-------RTPGWLAVLAFLVAG  53

Query:  61 FLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLF 120
            L++        +F   F  +   ++ K + LL     + L       E+   FE+ +L 
Sbjct:  54 ILVVARTGTDDAFF-GLFITDAFARFAKVLILLGSAFSIVLSFGYFERERKGRFEYPVLI 112

Query: 121 ILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGL 180
           + + L + +++S  DL+++Y+ LEM +L  YVLA+IRR S  STEAGLKYF+LG  S+G+
Sbjct: 113 VFATLGMLMMVSANDLIALYMGLEMQSLALYVLASIRRDSLRSTEAGLKYFVLGALSSGM 172

Query: 181 LLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPF 240
           LL+G +LIYG  G T+F  L+  F S     S+      L++GLVF+     FK+SA PF
Sbjct: 173 LLYGCSLIYGFAGTTSFAGLASVF-SAEGGTSV-----GLVVGLVFLICGLAFKISAVPF 226

Query: 241 HMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFL 300
           HMW+PDVYEG  T +  LF +  K+    LF+ +      +L + WQ++ +  +  S+ L
Sbjct: 227 HMWTPDVYEGAPTPVTALFAVAPKVAALALFVRVLSGPFGDLLDSWQQILVFVSIASMVL 286

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G F A  QT  KR +AYSSI H+G+ ++ +++ N  G   ++ Y+  YI +N+G FA +L
Sbjct: 287 GAFAAMVQTNIKRLMAYSSIGHMGYALVGLAAGNEAGITGVMIYLSSYIFMNIGTFAIIL 346

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
            +R  R+ +    +  +S+ + LSK+HP++AF++++ +FS++GIPP+AGFF K  VF+  
Sbjct: 347 GMR--RDGRL---VENLSDLSGLSKSHPMMAFALMVFMFSMAGIPPLAGFFGKWYVFMAA 401

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDK 466
           +++ L+ L +  +  S +  FYY+RIIKI+YFD         P+D 
Sbjct: 402 VQAGLFGLAVVGVLASVVGAFYYLRIIKIMYFDEAT-----QPLDA 442

ref|YP_007317110.1| NADH dehydrogenase subunit 2 (mitochondrion) [Nannochloropsis gaditana]
gb|AFZ64337.1| NADH dehydrogenase subunit 2 (mitochondrion) [Nannochloropsis gaditana]
(493 aa)

Score: 299 bits (766), Expect: 2.00704e-78
Length: 472, Idn/Pos/Gap = 181/283/17 (38%/59%/3%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVV-ITFTYILFLIINT  66
           +DI IF PE++L+L + I+LIYG+  +T+  Y YP++SKN   LV+ I F   L  + N 
Sbjct:   9 NDIKIFFPEIFLSLAILIVLIYGVLLATSLTYNYPLISKNIYKLVLFILFLTSLLTMYNP  68

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVI--SNISLEKLNVFEFFLLFILSI 124
            D+   +  +F   ++ L  +  +F+L G  +  L++  S I   ++N +E+FLL + SI
Sbjct:  69 IDYALIFQKTFV--HDDLTRVAKLFVL-GSSFACLLLFQSYIENSQINNYEYFLLILFSI 125

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
             + L++S++DL+S Y+++E+  L FYVLA+ +R S FSTEAGLKYFILG FS+GLLL+ 
Sbjct: 126 FGLNLLVSSYDLISAYLAIELQALSFYVLASFQRQSVFSTEAGLKYFILGAFSSGLLLYA 185

Query: 185 IALIYGCIGITNFIDLSLF-FQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMW 243
            +LIYG  G TN I++  F      +  +I++I       L+F+   F FK++A PFHMW
Sbjct: 186 FSLIYGVTGTTNLINIKNFCLDPYFEGATIIQI------ALIFLIAGFLFKIAAFPFHMW 239

Query: 244 SPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTF 303
           +PDVYEG+ TS    F I  KI I   F+ L   S      +W ++ L  A  S+    F
Sbjct: 240 TPDVYEGSPTSTTIFFAIVPKIAIMSFFVRLCSFSFSSFDGIWGEILLFSALGSIIYSAF 299

Query: 304 IAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR 363
           +A  Q   KR LAYS I HVGFI++ +S+   +G  ++ FY+++Y++ +L ++  LL   
Sbjct: 300 VAIKQNSLKRLLAYSGIGHVGFILLPLSTNTLDGLQAMFFYLLVYMITSLPVWGLLLVCM 359

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
             +    N     +S    L  + PI+A    +  FS++GIPP+ GF++K+ +F + +KS
Sbjct: 360 KGKKNSQNS----VSILGGLPTSSPILAILASLAFFSLAGIPPLVGFYSKIFIFFSAIKS 415

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFS 475
           SLY +    + IS ++T+YYI I+K IYF+    W+ Y P+ K K+ VL+ S
Sbjct: 416 SLYLVAFVVLAISVVSTYYYISIVKTIYFEKNKNWIFYEPVTKEKSIVLAVS 467

ref|YP_003875489.1| NADH dehydrogenase subunit 2 [Silene latifolia]
gb|ADK73332.1| NADH dehydrogenase subunit 2 [Silene latifolia]
(488 aa)

Score: 297 bits (760), Expect: 8.86268e-78
Length: 473, Idn/Pos/Gap = 176/275/37 (37%/58%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   IFLL      + +C+ F        E+ + FEF +L +LS  S
Sbjct:  70 LFWNNFFKRDNFTYFCQIFLLLSTAGTISMCFDFF-----EQERFDAFEFIVLILLSTCS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEI-PTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +IYG  G T+F  L+     I+    I  +  + + +G++FI+  F FK++A PFHMW+P
Sbjct: 185 MIYGSTGATHFDQLA----KILTGYEITGVRSSGIFMGILFIAVGFLFKITAVPFHMWAP 240

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLFL 300
           D+YEG+ T +   F I  KI+I    + +F     G +L       Q++   C+  S+ L
Sbjct: 241 DIYEGSPTPVTAFFSIAPKISISANILRVFIYGSYGATL-------QQIFFFCSIASMIL 293

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G   A AQTK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + 
Sbjct: 294 GALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGLFIYASMTIDAFAIVS 353

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +LR  R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   
Sbjct: 354 ALRQTR-------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAA 406

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
           L    Y L    +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+
Sbjct: 407 LGCGAYFLAPVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLA 459

ref|ZP_18918468.1| NADH-ubiquinone oxidoreductase chain N [Caenispirillum salinarum AK4]
gb|EKV30842.1| NADH-ubiquinone oxidoreductase chain N [Caenispirillum salinarum AK4]
(480 aa)

Score: 297 bits (760), Expect: 1.06484e-77
Length: 477, Idn/Pos/Gap = 167/267/22 (35%/55%/4%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE++L +    LL+YG+F   +        + + G++ VI F      ++ T +     
Sbjct:  11 LPEIFLAVAGMALLMYGVFRKGDT-------TTSVGWMTVIAFIVAAIFVV-TGETNQLV  62

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           F   F  ++   + K + L  G   + + +  +  EK+  FEF ++ + +   + ++ S 
Sbjct:  63 FGGSFITDSFSAFAKVLILAGGAFTLIMALQWLKAEKIARFEFCIIMLFATTGMLMMASA 122

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            DL+S Y+ LE+ +L  YV+A   R +  STEAGLKYF+LG  ++GLLL+G++++YG  G
Sbjct: 123 NDLISFYLGLELQSLSAYVIAAFNRDNLRSTEAGLKYFVLGAVASGLLLYGMSMLYGFTG 182

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
            T F         I +        T +L+GLVFI     FK+SAAPFHMW+PDVYEG  T
Sbjct: 183 TTTF-------AGIAEVIGAGHAGTGVLVGLVFILAGLSFKVSAAPFHMWTPDVYEGAPT 235

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F I  K+    L   +     +E+ + WQ++  + A  S+F+G F A  QT  KR
Sbjct: 236 PVTAFFAIAPKVAALALMARVLMGPFYEMADQWQQVVWLVAALSMFIGGFAAITQTNIKR 295

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYSSI HVG+ +I ++  +  G   ++ Y+ IY+ +N+G FA +LS+R F+       
Sbjct: 296 LMAYSSIGHVGYALIGLAVADEQGVRGMLIYLAIYLFMNVGTFAVILSMR-FK----GRA 350

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
              IS+ + LSKTHP++A  + I +FS++GIPP+AGFF KL VFL  +++ LY L +  +
Sbjct: 351 TEQISDLSGLSKTHPVMALWLAIFMFSMAGIPPLAGFFGKLYVFLAAVQAELYGLAVIGV 410

Query: 434 TISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLII 490
             S +A FYY+RIIK++YFD   V     P  ++ + +L    L +T F + P  I+
Sbjct: 411 LTSVVAAFYYLRIIKVMYFDE-PVEAFDRP-SRATSAILGICGLFVTLFIVYPAPIL 465

ref|YP_004935316.1| NADH dehydrogenase subunit 2 (mitochondrion) [Silene noctiflora]
gb|AEM46221.1| NADH dehydrogenase subunit 2 (mitochondrion) [Silene noctiflora]
(488 aa)

Score: 295 bits (756), Expect: 2.97162e-77
Length: 487, Idn/Pos/Gap = 181/276/37 (37%/56%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE++L    F+LLI+G+ +ST+K   YP L  N G+L +++    L L+  +     +  
Sbjct:  10 PEIFLINATFLLLIHGVVFSTSKRVDYPPLVSNVGWLGLLSVLITLLLLAASAPLLTIGH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   IFLL      + +C+ F        E+ + FEF +L  L   S
Sbjct:  70 LFWNTFFKRDNFTYFCQIFLLLSTAGTISMCFDFF-----EAERFDAFEFIVLISLPTSS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS  DL+++Y+++E  +L FYVLA  +R SEFSTEAG KY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAHDLIAMYLAIEPQSLCFYVLAASKRKSEFSTEAGSKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTD-LLLGLVFISTAFFFKLSAAPFHMWSP 245
           +IYG  G T+F  L+     I+    I  + +  L +G++FI+  F FK++A PFHMW+P
Sbjct: 185 MIYGSTGATHFDQLA----KILTGYEITGLQSSGLFMGMIFIAVGFLFKITAVPFHMWAP 240

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLFL 300
           D+YEG+ T +   F +  KI +F   + LF     G +L E+F         C+  S+ L
Sbjct: 241 DIYEGSPTPVTAFFSVAPKIALFANLLRLFLYGSYGATLQEIF-------FFCSISSMIL 293

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G   A AQTK KR LA+SSI HVG+I   VS     G  +L+  + IY  + +  FA L 
Sbjct: 294 GGLAALAQTKVKRLLAHSSIGHVGYIRTGVSCGTIEGIQALLIALFIYASMTIDAFAILS 353

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +LR         +++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   
Sbjct: 354 ALR-------QSKLKYIADLGALAKTNPISAITFAITMFSYAGIPPLAGFGSKFYLFFAA 406

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           L    Y L    I  S +  FYYIR++K I+FD    W++Y PMD++K+ +L+ +   +T
Sbjct: 407 LSCGAYFLASVGIITSVIGCFYYIRLVKRIFFDTPKTWILYQPMDRNKSLLLAMTSSFIT 466

Query: 481 FFCLNPN 487
              L P+
Sbjct: 467 SSFLYPS 473

emb|CAC50353.1| NADH dehydrogenase subunit 2 [Ricciocarpos natans]
(417 aa)

Score: 295 bits (754), Expect: 4.14896e-77
Length: 430, Idn/Pos/Gap = 166/257/19 (38%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L +N G+L +++    IL + + +P  ++    +    +N   + +   LL    
Sbjct:   2 YDYPPLVRNVGWLGLLSVLITILLVAVGSPLAVANLVYNNLIIDNFTYFCQIFLLLSTAS  61

Query:  98 YVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIR 157
            + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  +
Sbjct:  62 TMVMCLDYFKQESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASK 121

Query: 158 RTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKSI 213
           R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S 
Sbjct: 122 RDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS- 180

Query: 214 LEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFIN 273
               + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    + 
Sbjct: 181 ----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTIVTAFFSIAPKISILANMLR 236

Query: 274 LFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSI 333
           +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG+++I  S  
Sbjct: 237 VFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLLIGFSCG 294

Query: 334 NYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFS 393
              G  SL+  M IY+L+ +  FA +L+LR  R        +YI++   L+KT+PI+A +
Sbjct: 295 TIEGIQSLLIGMFIYVLMTVNAFAIVLALRQNR-------FKYIADLGALAKTNPILAIT 347

Query: 394 ILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFD 453
           + I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YFD
Sbjct: 348 LSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYFD 407

Query: 454 NCNVWLIYVP 463
               W++Y P
Sbjct: 408 TPKTWILYKP 417

ref|YP_004062230.1| NADH dehydrogenase subunit 2 [Plocamiocolax pulvinata]
gb|ADR03246.1| NADH dehydrogenase subunit 2 [Plocamiocolax pulvinata]
(494 aa)

Score: 294 bits (753), Expect: 6.9021e-77
Length: 461, Idn/Pos/Gap = 191/288/7 (41%/62%/1%)

Query:  30 GIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKT  89
           G+F+ST   YGYP++S N G+LV+  F + L L  +        +     F+  +  I+ 
Sbjct:  28 GVFFSTFIKYGYPLVSSNMGWLVLQVFCFCLLLAYSQIYIYLFSWNKLLIFDFFVWGIQL  87

Query:  90 IFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLI 149
           +  LV I +  +    I  +K+  FE+++L + S++ I  +I ++D LSIY+S+E  +LI
Sbjct:  88 VIFLVLILWWAITFIYIRNQKILFFEYWVLILFSVIGILFVIKSYDFLSIYLSIEFQSLI 147

Query: 150 FYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQSIMK 209
           FY+LA+I R+SEFSTEAGLKYFILG FS+  LL G ++IYG  GITN  D S  F     
Sbjct: 148 FYILASINRSSEFSTEAGLKYFILGAFSSAFLLLGFSIIYGLTGITNLGDFSKLFSG--- 204

Query: 210 EKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFF 269
              + +    +++GL+F+  +  FKLSAAPFHMW PDVYEG+ +SI   F IF K  I  
Sbjct: 205 -TYLFDCNFSIIIGLIFVLVSLMFKLSAAPFHMWVPDVYEGSPSSITVFFSIFPKYAIIC 263

Query: 270 LFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIA 329
           L + L   S  +    W++  L+C      +GT  AF Q K+KRFLAYSSINH+ F+++A
Sbjct: 264 LCLRLLVYSFHDYIIYWREFILLCTILCTIVGTLGAFYQYKWKRFLAYSSINHISFLLLA 323

Query: 330 VSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPI 389
           +   +    Y +IFY++IY +I +GIF+ +LSL  +      +Q+RYI     L+ T+PI
Sbjct: 324 LMIGDLQSIYCIIFYIVIYSVIMIGIFSIVLSLYYYDY-PNYYQLRYIKNIISLNITNPI 382

Query: 390 IAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKI 449
           + FS+ ++LFS+SGIPP AGFF+KL + L+ L+ + + + +F I  SC++ FYYIR+IKI
Sbjct: 383 LTFSLSLLLFSVSGIPPFAGFFSKLFILLSSLQVNSFGICLFLILFSCVSCFYYIRLIKI 442

Query: 450 IYFD-NCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLI 489
           +YF+ N N+ +IY P+ KS +  L  S+++  F   + +LI
Sbjct: 443 MYFEINQNLLIIY-PLPKSISIALGISLIINIFLIFDLDLI 482

ref|YP_002297452.1| NADH dehydrogenase subunit N [Rhodospirillum centenum SW]
sp|B6ISW8.1|NUON_RHOCS RecName: Full=NADH-quinone oxidoreductase subunit N; AltName: Full=NADH dehydrogenase I subunit N; AltName: Full=NDH-1 subunit N
gb|ACI98639.1| NADH-quinone oxidoreductase chain N [Rhodospirillum centenum SW]
(481 aa)

Score: 294 bits (753), Expect: 7.01825e-77
Length: 454, Idn/Pos/Gap = 152/259/24 (33%/57%/5%)

Query:   4 IINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLI  63
           ++ I D    +PE++L      LL+ G+F   +        ++   +L V        L+
Sbjct:   1 MVAIPDFLPALPEMFLACAAMALLMLGVFRGADS-------TRLVSWLAVGAALVAGVLV  53

Query:  64 INTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILS 123
           +      +  F   F  ++   + K + L      V L ++ +  E+++ FE+ +L +L+
Sbjct:  54 LAASGDRAVTFAGMFIADDFAVFAKVLILTATALTVVLSVNYLEREQMDRFEYPVLMLLA 113

Query: 124 ILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLF 183
            + + L++S  DL+S+Y+ LE+ +L  YV+A  RR    S+EAGLKYF+LG  S+ +LL+
Sbjct: 114 TVGMMLMVSANDLISLYVGLELQSLSLYVIAAFRRDYAKSSEAGLKYFLLGSLSSCILLY 173

Query: 184 GIALIYGCIGITNFIDLSLFFQSIMKEKSILEIP--TDLLLGLVFISTAFFFKLSAAPFH 241
           G +LIYG  G TNF  L++ F S        ++P  T +++GLVF++    FK+SA PFH
Sbjct: 174 GASLIYGFSGTTNFERLAVMFSS--------DVPAATGVVVGLVFVAAGLAFKISAVPFH 225

Query: 242 MWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLG 301
           MW+PDVYEG  TS+   F +  K+    LF+ +      EL   WQ++    A  S+ LG
Sbjct: 226 MWTPDVYEGAPTSVTAFFAVAPKVAALALFVRVLVDPFGELLAQWQQVVWFSAVASMLLG 285

Query: 302 TFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLS 361
           +  A  Q   KR +AYSSI H+G+ ++ +++    G   ++ Y+ IY+ +N+G FA +LS
Sbjct: 286 SLAAIQQRNIKRMMAYSSIGHIGYALVGLAAGTEEGVRGVLIYLAIYLAMNVGTFAVILS 345

Query: 362 LR-NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +R N R       +  I + + LS++HP++A ++   +FS+ G+PP+AGFF KL VF+  
Sbjct: 346 MRVNGR------MVENIDDLSGLSRSHPMMALAMAFFMFSLGGVPPMAGFFGKLYVFMAA 399

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDN 454
           +++ LY L +  +  S ++ FYY+RI+K+++FD+
Sbjct: 400 IEAQLYVLAVIGVLTSVISLFYYLRIVKVMWFDD 433

ref|YP_006460152.1| NADH dehydrogenase subunit 2 (mitochondrion) [Mimulus guttatus]
gb|AEK26540.1| NADH dehydrogenase subunit 2 (mitochondrion) [Mimulus guttatus]
(488 aa)

Score: 293 bits (751), Expect: 1.02163e-76
Length: 482, Idn/Pos/Gap = 174/275/27 (36%/57%/5%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE++L    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFLINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLKW------IKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            ++ F+NN  +        + + L      + +   +   E+ + FEF +L  L   S+ 
Sbjct:  68 -AYLFWNNLFRRDNFTYLCQILLLCCTAGTISMCFDSSEQERFDAFEFIVLIPLPTRSML 126

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
            +IS +D +++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG ++I
Sbjct: 127 FMISAYDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFSSGILLFGCSMI 186

Query: 189 YGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           YG  G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PFHMW+PD
Sbjct: 187 YGSTGATHFDQLAKILTGYEITGARS-----SGIYMGILFIAVGFLFKITAVPFHMWAPD 241

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIA 305
           +YEG+ T +     I  KI+I     N+   S++  + +  Q++   C+  S+ LG   A
Sbjct: 242 IYEGSPTPVTAFLSIAPKISIS---ANISRVSIYGSYGDTLQQIFFFCSIASMILGALAA 298

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
            AQTK KR LA+SSI HVG+I I +S     G  SL+  + IY  + +  FA + +LR  
Sbjct: 299 IAQTKVKRLLAHSSIGHVGYIRIGLSCGTIEGIQSLLMAIFIYASMTIDAFAIVSALRQT 358

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R       ++YI++   L+KT+PI+A +  I +FS  GIPP+AGFF+K  +F   L    
Sbjct: 359 R-------VKYIADLGALAKTNPILAITFSITMFSYIGIPPLAGFFSKFYLFFAALACGA 411

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLN 485
           Y L +  +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T F   
Sbjct: 412 YLLALVGVVTSVIGRFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPY 471

Query: 486 PN 487
           P+
Sbjct: 472 PS 473

ref|YP_004849337.1| NADH dehydrogenase subunit 2 [Cucumis sativus]
gb|ADZ10764.1| NADH dehydrogenase subunit 2 [Cucumis sativus]
(488 aa)

Score: 292 bits (748), Expect: 2.09376e-76
Length: 476, Idn/Pos/Gap = 177/270/29 (37%/56%/6%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLST--  72
           PE++L    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFLINATFILLIHGVVFSTSKKYSYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIGH  69

Query:  73 -YFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            ++  FF  +N   + + + LL     + +   +   E+ + FEF +L  L   S+  +I
Sbjct:  70 LFWNHFFRRDNFTYFCQILLLLSTAGTISMCFDSFFKERFDAFEFIVLIPLPTRSMLFMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  D +S+Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG ++IYG 
Sbjct: 130 SAHDSISMYLAIEPQSLCFYVMAASKRKSEFSTEAGSKYLILGAFSSGILLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++ I+  F FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGARS-----SGIFMGILSIAVGFLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINL-----FGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           G+ T +     I  KI+IF     L     +G +L E+F         C+  S+ LG   
Sbjct: 245 GSPTPVTAFLSIAPKISIFANISRLSIYGSYGATLQEIF-------FFCSIASMILGALA 297

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A AQTK KR LA+SSI HVG+I    S     G  SL+  + IY+L+ +  FA +L+LR 
Sbjct: 298 AMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYVLMTIDAFAIVLALRQ 357

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L   
Sbjct: 358 TR-------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCG 410

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
            Y L    +  S +  FYYIR+ KI++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 411 AYFLAPVGVVTSVIGRFYYIRLAKIMFFDTPRTWILYEPMDRDKSLLLAMTSSFIT 466

emb|CAC48197.1| NADH dehydrogenase subunit 2 [Sphaerocarpos donnellii]
emb|CAC50242.1| NADH dehydrogenase subunit 2 [Bucegia romanica]
emb|CAC50341.1| NADH dehydrogenase subunit 2 [Lunularia cruciata]
(417 aa)

Score: 292 bits (748), Expect: 2.16481e-76
Length: 430, Idn/Pos/Gap = 165/257/19 (38%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L +N G+L +++    IL + + +P  ++    +    +N   + +   LL    
Sbjct:   2 YDYPPLVRNVGWLGLLSVLITILLVAVGSPLAVANLVYNNLIIDNFTYFCQIFLLLSTAS  61

Query:  98 YVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIR 157
            + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  +
Sbjct:  62 TMVMCLDYFKQESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASK 121

Query: 158 RTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKSI 213
           R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S 
Sbjct: 122 RDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS- 180

Query: 214 LEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFIN 273
               + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    + 
Sbjct: 181 ----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTIVTAFFSIAPKISILANMLR 236

Query: 274 LFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSI 333
           +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG+++I  S  
Sbjct: 237 VFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLLIGFSCG 294

Query: 334 NYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFS 393
              G  SL+  + IY+L+ +  FA +L+LR  R        +YI++   L+KT+PI+A +
Sbjct: 295 TIEGIQSLLIGIFIYVLMTVNAFAIVLALRQNR-------FKYIADLGALAKTNPILAIT 347

Query: 394 ILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFD 453
           + I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YFD
Sbjct: 348 LSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYFD 407

Query: 454 NCNVWLIYVP 463
               W++Y P
Sbjct: 408 TPKTWILYKP 417

emb|CAC20910.1| NADH dehydrogenase subunit 2 [Sphagnum fallax]
(417 aa)

Score: 292 bits (748), Expect: 2.6228e-76
Length: 426, Idn/Pos/Gap = 165/253/11 (38%/59%/2%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L +N  +L +++    IL L    P  ++  F +    +N   + +   LL    
Sbjct:   2 YDYPPLVRNVSWLGLLSVLITILLLAAGAPLTVANLFYNNLIIDNFTYFCQIFLLLSTAS  61

Query:  98 YVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIR 157
            + + +     E LN FE   L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A ++
Sbjct:  62 TIVMCLDYFKEESLNAFESIGLILLSTRSMLFMISAYDLIAMYLAIELQSLCFYVIAALK 121

Query: 158 RTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIP 217
           R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F    K        
Sbjct: 122 RDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG-YKITLFGAQS 180

Query: 218 TDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGT 277
           + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    + +F  
Sbjct: 181 SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMVRVFIY 240

Query: 278 SLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNG 337
           S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S     G
Sbjct: 241 SFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSCGTIEG 298

Query: 338 FYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILII 397
             SL+  + IY+L+ + +FA +L+LR        ++ +YI++   L+KT+PI+A ++ I 
Sbjct: 299 IQSLLIGVFIYVLMTINVFAIVLALR-------QNRFKYIADLGALAKTNPILAITLSIT 351

Query: 398 LFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNV 457
           +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YFD    
Sbjct: 352 MFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYFDTPKT 411

Query: 458 WLIYVP 463
           W++Y P
Sbjct: 412 WILYKP 417

ref|YP_003795205.1| NADH dehydrogenase subunit 2 [Proteromonas lacertae]
ref|YP_003795239.1| NADH dehydrogenase subunit 2 [Proteromonas lacertae]
gb|ADD46343.1| NADH dehydrogenase subunit 2 [Proteromonas lacertae]
gb|ADD46377.1| NADH dehydrogenase subunit 2 [Proteromonas lacertae]
(510 aa)

Score: 292 bits (747), Expect: 2.80384e-76
Length: 449, Idn/Pos/Gap = 172/275/11 (38%/61%/2%)

Query:  41 YPILSKNFGYLVVITFTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVF 100
           YPIL+     L ++    +LF+I     + S  F +    +  + + K + +   IC +F
Sbjct:  60 YPILTPVITSLSILALFLVLFIICKNGIYFSGLFSNSILIDQGVFYAKIVIIGFAICCLF 119

Query: 101 LVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTS 160
              + +S  K N FE+  L  +++L I L+ S+FD + +Y+++E+ +L FY+LA+++R S
Sbjct: 120 ASFNYLSSFKFNSFEYITLLNIALLGILLVASSFDFILVYLAIELQSLSFYILASLKRNS 179

Query: 161 EFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDL 220
            FSTEAGLKYFILG  S+G LL GI+LIYG  G+TNF +L  +F +        ++   +
Sbjct: 180 VFSTEAGLKYFILGAVSSGFLLLGISLIYGYTGLTNFEELIQYFLN-------GDLNNVI 232

Query: 221 LLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLF 280
           +LGL+FI  AF FKL+AAPFHMWSPDVYEG  T I   F +  K  I  L I +  +  F
Sbjct: 233 ILGLLFIIVAFLFKLTAAPFHMWSPDVYEGAPTIISMFFAVVPKFAIVVLLIRILVSVFF 292

Query: 281 ELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYS 340
           +   +WQ + L+ AF S+ + TF +  QTK KRFLAYSSI H+GFI++ ++     G   
Sbjct: 293 DYITIWQPIILLSAFVSILISTFASIKQTKIKRFLAYSSIAHIGFILLGIAVGTAEGIQG 352

Query: 341 LIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFS 400
            IFY + Y+++ +G++A +L+  ++     N+ I YIS+     + +PIIA + L I+FS
Sbjct: 353 AIFYSIAYVVMTIGVWAFVLTFYSYS----NNNIIYISDLASFYRINPIIAITFLSIMFS 408

Query: 401 ISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLI 460
           ++G+PP  GFF+K  +F   +++S Y + I  I +S + ++YYIR +K+I+F+N   W++
Sbjct: 409 MAGVPPFLGFFSKFFIFFATIEASFYFISIICILMSVIGSYYYIRFVKVIFFENSANWVV 468

Query: 461 YVPMDKSKAFVLSFSVLLLTFFCLNPNLI 489
             P+ +S AFVL   ++++  F   PN++
Sbjct: 469 LKPIHRSLAFVLGLVLIIIACFIFYPNIL 497

emb|CAC20163.1| NADH dehydrogenase subunit 2 [Fissidens cristatus]
(417 aa)

Score: 292 bits (747), Expect: 3.17767e-76
Length: 381, Idn/Pos/Gap = 159/237/28 (41%/62%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL++S  S+          E LN FE  +L +LS  S+  +IST+DL+++Y+++E+ 
Sbjct:  51 CQIFLLVSTASIIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISTYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    I +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMIRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

emb|CAC20107.1| NADH dehydrogenase subunit 2 [Dichodontium pellucidum]
(417 aa)

Score: 292 bits (747), Expect: 3.23114e-76
Length: 431, Idn/Pos/Gap = 170/259/21 (39%/60%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNTLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             +F+ +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIFMCLGYFKKESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRNSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

ref|YP_004222746.1| NADH dehydrogenase subunit 2 [Glaucocystis nostochinearum]
gb|ADW83118.1| NADH dehydrogenase subunit 2 [Glaucocystis nostochinearum]
(559 aa)

Score: 292 bits (747), Expect: 3.36879e-76
Length: 487, Idn/Pos/Gap = 185/292/27 (37%/59%/5%)

Query:  25 ILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYFPSFFFFNNSL  84
           +LL+YG+ +ST K+Y YPIL KN  +L +++  + + L  N   +    F      +   
Sbjct:  35 LLLMYGVAFSTLKFYDYPILIKNIKWLTILSLIFAVILCKNNYGYSLIVFQKLLIISPFN  94

Query:  85 KWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLE 144
             IK + LL  I  + + I  I  EK+N FEF +L +LSI+ + L++S++DLLS+Y++LE
Sbjct:  95 TLIKLLILLSSIFILLISIDYIKYEKVNTFEFSILILLSIIGMLLLVSSYDLLSLYLALE 154

Query: 145 MLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFF 204
           M +L  YVLA  +R SEFS EAGLKY IL  FS+G+LL GI+ IYG  G+  F DL+LFF
Sbjct: 155 MQSLCLYVLAAYKRNSEFSLEAGLKYLILSAFSSGILLLGISFIYGFTGLLGFEDLNLFF 214

Query: 205 QSIMKEKSILEI----PTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFI 260
            ++    ++  +       + LG++FI  +  FK++AAPFHMW+PDVYEG  T I   F 
Sbjct: 215 INMYSNTNMDTLFYSNYYTIQLGVLFIIISLLFKINAAPFHMWAPDVYEGAPTVITAFFS 274

Query: 261 IFTKITIFFLFINL----FGTSLFELFNVWQKLTLI--CAFFSLFLGTFIAFAQTKFKRF 314
           +  K+T   L I L    F    +   N + K  +   C+ FS+ +G+  A  Q + KR 
Sbjct: 275 VVPKLTTLGLLIQLLISPFHIYFYSSINYFFKHNIFFYCSIFSILIGSLAALYQKRIKRL 334

Query: 315 LAYSSINHVGFIMIA-VSSIN-------------YNGFYSLIFYMMIYILINLGIFASLL 360
           LAYS+I+H+GFI++  +  IN             ++G  +   Y+ IYI++++  F  +L
Sbjct: 335 LAYSTISHIGFILMGFLCGINLEKKFVFFSNGFIFSGLEASFLYIFIYIVMSINFFTIIL 394

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           SLR  ++      I+Y+++F+ L+K +P++A +  + L S++GIPP+AGF +K  +FL  
Sbjct: 395 SLRRKKDL---FLIKYLTDFSNLNKINPLLAITFALGLLSMAGIPPLAGFISKFYLFLAA 451

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           L+   Y L I  I +S L+ FYYIR+IKI+YF+  + W +++P+D+ K+ +LS +   + 
Sbjct: 452 LRGEYYFLAILGILLSSLSAFYYIRLIKIMYFEKESRWDLFIPIDREKSIILSLTFFCIL 511

Query: 481 FFCLNPN 487
           FF +NP 
Sbjct: 512 FFLINPE 518

emb|CAC50255.1| NADH dehydrogenase subunit 2 [Corsinia coriandra]
(417 aa)

Score: 291 bits (746), Expect: 4.36322e-76
Length: 430, Idn/Pos/Gap = 165/256/19 (38%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L +N G+L +++    IL + + +P  ++    +    +N   + +   LL    
Sbjct:   2 YDYPPLVRNVGWLGLLSVLITILLVAVGSPLAVANLVYNNLIIDNFTYFCQIFLLLSTAS  61

Query:  98 YVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIR 157
            + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  +
Sbjct:  62 TMVMCLDYFKQESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASK 121

Query: 158 RTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKSI 213
           R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF  L+  F     ++   +S 
Sbjct: 122 RDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEGLAKIFTGYEITLFGAQS- 180

Query: 214 LEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFIN 273
               + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    + 
Sbjct: 181 ----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTIVTAFFSIAPKISILANMLR 236

Query: 274 LFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSI 333
           +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG+++I  S  
Sbjct: 237 VFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLLIGFSCG 294

Query: 334 NYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFS 393
              G  SL+  + IY+L+ +  FA +L+LR  R        +YI++   L+KT+PI+A +
Sbjct: 295 TIEGIQSLLIGIFIYVLMTVNAFAIVLALRQNR-------FKYIADLGALAKTNPILAIT 347

Query: 394 ILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFD 453
           + I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YFD
Sbjct: 348 LSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYFD 407

Query: 454 NCNVWLIYVP 463
               W++Y P
Sbjct: 408 TPKTWILYKP 417

emb|CAC20793.1| NADH dehydrogenase subunit 2 [Physcomitrella patens]
(417 aa)

Score: 291 bits (745), Expect: 4.90386e-76
Length: 440, Idn/Pos/Gap = 174/261/39 (39%/59%/8%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL+L  +TP  ++       F+NN +    T F     C
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILWLASSTPLTVAN-----LFYNNLIIDHFTYF-----C  51

Query:  98 YVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLN 147
            VFL++S  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +
Sbjct:  52 QVFLLVSTASTIVMCLGYFKEESLNAFESIILILLSTCSMLFMISAYDLIAMYLAIELQS 111

Query: 148 LIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ-- 205
           L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F   
Sbjct: 112 LCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGY 171

Query: 206 --SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFT 263
             ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  
Sbjct: 172 EITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAP 226

Query: 264 KITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHV 323
           KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HV
Sbjct: 227 KISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHV 284

Query: 324 GFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTIL 383
           G++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L
Sbjct: 285 GYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGAL 337

Query: 384 SKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYY 443
           +KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYY
Sbjct: 338 AKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYY 397

Query: 444 IRIIKIIYFDNCNVWLIYVP 463
           IR +KI+YFD    W++Y P
Sbjct: 398 IRFVKIMYFDTPKKWILYKP 417

emb|CAC20849.1| NADH dehydrogenase subunit 2 [Pogonatum urnigerum]
(421 aa)

Score: 290 bits (743), Expect: 1.00501e-75
Length: 437, Idn/Pos/Gap = 171/262/29 (39%/59%/6%)

Query:  39 YGYPILSKNFGYLVVITFTY---ILFLIINTPDFLSTYFPSFFFFNN----SLKWIKTIF  91
           Y YP L  N  +L +++ +Y   I  L++ +   L+    +  F+NN    +  +   IF
Sbjct:   2 YDYPPLVCNVSWLGLLSVSYRYLITILLVASSAPLTV---ANLFYNNLIIDNFTYFCQIF  58

Query:  92 LLVGICY-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIF 150
           LLV     + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L F
Sbjct:  59 LLVSTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCF 118

Query: 151 YVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----S 206
           YV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     +
Sbjct: 119 YVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEIT 178

Query: 207 IMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKIT 266
           +   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+
Sbjct: 179 LFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKIS 233

Query: 267 IFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFI 326
           I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++
Sbjct: 234 ILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYL 291

Query: 327 MIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKT 386
            I  S     G  SL+  + IY+L+ + +FA +L+LR       NH  +YI++   L+KT
Sbjct: 292 FIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQ------NH-FKYIADLGALAKT 344

Query: 387 HPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRI 446
           +PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR 
Sbjct: 345 NPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRF 404

Query: 447 IKIIYFDNCNVWLIYVP 463
           +KI+YFD    W++Y P
Sbjct: 405 VKIMYFDTPKKWILYKP 421

gb|ACZ34320.1| NADH dehydrogenase subunit 2 [Oedipodiella australis]
(417 aa)

Score: 290 bits (742), Expect: 1.03912e-75
Length: 431, Idn/Pos/Gap = 169/259/21 (39%/60%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A +
Sbjct:  61 STIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAL 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRNSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

gb|ABX25848.1| NADH dehydrogenase subunit 2 [Dawsonia sp. VKL981115]
(417 aa)

Score: 290 bits (742), Expect: 1.23812e-75
Length: 381, Idn/Pos/Gap = 159/236/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL++S  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLVSTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    I +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMIRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR       NH  +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQ------NH-FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

emb|CAC20025.1| NADH dehydrogenase subunit 2 [Ditrichum cylindricum]
(417 aa)

Score: 290 bits (741), Expect: 1.33467e-75
Length: 435, Idn/Pos/Gap = 170/259/29 (39%/59%/6%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNN----SLKWIKTIFLL  93
           Y YP L  N  +L +++    IL +  +TP  ++       F+NN    +  +   IFLL
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVAN-----LFYNNLIIDNFTYFCQIFLL  56

Query:  94 VGICY-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYV 152
           V     + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV
Sbjct:  57 VSTASTIVMCLGYFKEESLNAFESIVLILLSTRSMLFMISAYDLIAMYLAIELQSLCFYV 116

Query: 153 LATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIM 208
           +A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++ 
Sbjct: 117 IAASKRNSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLF 176

Query: 209 KEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIF 268
             +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I 
Sbjct: 177 GAQS-----SGIFMGILFIAAGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISIL 231

Query: 269 FLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMI 328
              + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I
Sbjct: 232 ANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFI 289

Query: 329 AVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHP 388
             S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+P
Sbjct: 290 GFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNP 342

Query: 389 IIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIK 448
           I+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +K
Sbjct: 343 ILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVK 402

Query: 449 IIYFDNCNVWLIYVP 463
           I+YFD    W++Y P
Sbjct: 403 IMYFDTPKKWIVYKP 417

ref|YP_004927565.1| nad2 (mitochondrion) [Brassica carinata]
ref|YP_006666002.1| NADH dehydrogenase subunit 2 (mitochondrion) [Raphanus sativus]
gb|AEH43579.1| nad2 [Brassica carinata]
dbj|BAM36216.1| NADH dehydrogenase subunit 2 (mitochondrion) [Raphanus sativus]
dbj|BAM36245.1| NADH dehydrogenase subunit 2 (mitochondrion) [Raphanus sativus]
(488 aa)

Score: 290 bits (741), Expect: 1.40319e-75
Length: 479, Idn/Pos/Gap = 172/273/21 (35%/56%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++     ILLI+G+ +ST+K Y YP L+ N G+L +++    L L+        ++ 
Sbjct:  10 PEIFIINATSILLIHGVVFSTSKKYDYPPLASNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGIC-YVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            F +  F  ++  +   IFLL+     + +   +   E+ + FEF +L  L    +  +I
Sbjct:  70 LFWNNLFRRDNFTYFCQIFLLLSTAGTISMCFDSSDQERFDAFEFIVLIPLPTRGMLFMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  DL+++Y+++E  +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG ++IYG 
Sbjct: 130 SAHDLIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++ I+  F FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGARS-----SGIFMGILSIAVGFLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIAFAQ 308
           G+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A AQ
Sbjct: 245 GSPTPVTAFLSIAPKISI---SANILRVSIYGSYGATLQQIFFFCSIASMILGALAAMAQ 301

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           TK KR LA+SSI HVG+I    S     G  SL+  + IY L+ +  FA + +LR  R  
Sbjct: 302 TKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVSALRQTR-- 359

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    Y L
Sbjct: 360 -----VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFL 414

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPN 487
               +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +   +T   L P+
Sbjct: 415 APVGVVTSVIGRFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSFFITSSLLYPS 473

emb|CAC21233.1| NADH dehydrogenase subunit 2 [Ulota crispa]
(417 aa)

Score: 290 bits (741), Expect: 1.40319e-75
Length: 381, Idn/Pos/Gap = 158/235/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFREESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSMASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

emb|CAC19940.1| NADH dehydrogenase subunit 2 [Cinclidotus riparius]
(417 aa)

Score: 290 bits (741), Expect: 1.43876e-75
Length: 431, Idn/Pos/Gap = 168/259/21 (38%/60%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNTLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKKESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRNSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELARIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR        ++ +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALR-------QNRFKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

ref|NP_689374.1| NADH dehydrogenase subunit 2 [Chaetosphaeridium globosum]
gb|AAM96605.1|AF494279_10 NADH dehydrogenase subunit 2 [Chaetosphaeridium globosum]
(477 aa)

Score: 290 bits (741), Expect: 1.45081e-75
Length: 462, Idn/Pos/Gap = 169/265/21 (36%/57%/4%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
            D    +PE++L     ILL+YG+F  +        + +N  +L +++    L L +N  
Sbjct:   4 QDFVAILPEIFLINASIILLMYGVFCRSR------FIIRNIAWLGLLSIIVTLLLHVNNV  57

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
              +  F +    +N   + K   LL     + + +     E +  FE  +L + S  S+
Sbjct:  58 CTTANLFYNNLILDNFTFYCKMFLLLSTASVILMCLDYFKQENVYAFESIILILFSTCSM 117

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS +DL+++Y+++E+ +L FYV+A  +R SEFSTEAGLKYF+LG FS+G+LLFG +L
Sbjct: 118 LLMISAYDLITMYLAIELQSLCFYVIAASQRNSEFSTEAGLKYFLLGAFSSGILLFGCSL 177

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           +YG  G+TN+ +L+     IM   S    P  L + ++FI+  F FK++A PFHMW+PDV
Sbjct: 178 LYGFTGVTNYEELA----KIMLSFSSSNTPGMLAVAILFIAVGFLFKITAVPFHMWAPDV 233

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFA 307
           YEG+ T +   F I  KI I    + +F  SL++    WQ+L    +  S+ +G   A +
Sbjct: 234 YEGSPTYVTAFFSIAPKIAILANMLRIFVFSLYD--PTWQQLFFFSSAASMIVGALAAMS 291

Query: 308 QTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRN 367
           Q K KR LAYSSI H+G+I I        G  SL+  + IYI + + +FA++LSLR    
Sbjct: 292 QNKIKRLLAYSSIGHIGYICIGFCCGTLEGIASLLIALFIYICMTINVFAAILSLRK--- 348

Query: 368 YKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYS 427
               +  +YI +   LS+T+P++A ++ I +FS +GIPP+AGF +K  +F   L S L  
Sbjct: 349 ----NTFKYIGDLGGLSRTNPVLAITLAITMFSYAGIPPLAGFCSKFYLFFAALGSGLGL 404

Query: 428 LVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKA 469
           L    +  S ++ FYYIR +KI+YFD    W+++ PMD+ K+
Sbjct: 405 LAFIGVVTSVISCFYYIRFVKIMYFD--TAWILFEPMDREKS 444

gb|ABX25851.1| NADH dehydrogenase subunit 2 [Physcomitrium pyriforme]
(417 aa)

Score: 290 bits (741), Expect: 1.47523e-75
Length: 440, Idn/Pos/Gap = 173/260/39 (39%/59%/8%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL L  +TP  ++       F+NN +    T F     C
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLLASSTPLTVAN-----LFYNNLIIDHFTYF-----C  51

Query:  98 YVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLN 147
            +FL++S  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +
Sbjct:  52 QIFLLVSTASTIVMCLGYFKEESLNAFESIILILLSTCSMLFMISAYDLIAMYLAIELQS 111

Query: 148 LIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ-- 205
           L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F   
Sbjct: 112 LCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGY 171

Query: 206 --SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFT 263
             ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  
Sbjct: 172 EITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAP 226

Query: 264 KITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHV 323
           KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HV
Sbjct: 227 KISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHV 284

Query: 324 GFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTIL 383
           G++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L
Sbjct: 285 GYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGAL 337

Query: 384 SKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYY 443
           +KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYY
Sbjct: 338 AKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYY 397

Query: 444 IRIIKIIYFDNCNVWLIYVP 463
           IR +KI+YFD    W++Y P
Sbjct: 398 IRFVKIMYFDTPKKWILYKP 417

ref|YP_004927490.1| nad2 (mitochondrion) [Brassica oleracea]
ref|YP_004927818.1| nad2 (mitochondrion) [Brassica rapa subsp. campestris]
ref|YP_004927721.1| nad2 (mitochondrion) [Brassica juncea]
gb|AEH43467.1| nad2 [Brassica rapa subsp. campestris]
gb|AEH43518.1| nad2 [Brassica oleracea]
gb|AEH43691.1| nad2 [Brassica juncea]
emb|CBX48319.1| nad2 [Brassica napus]
(488 aa)

Score: 290 bits (741), Expect: 1.50005e-75
Length: 479, Idn/Pos/Gap = 172/273/21 (35%/56%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++     ILLI+G+ +ST+K Y YP L+ N G+L +++    L L+        ++ 
Sbjct:  10 PEIFIINATSILLIHGVVFSTSKKYDYPPLASNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGIC-YVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            F +  F  ++  +   IFLL+     + +   +   E+ + FEF +L  L    +  +I
Sbjct:  70 LFWNNLFRRDNFTYFCQIFLLLSTAGTISMCFDSSDQERFDAFEFIVLIPLPTCGMLFMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  DL+++Y+++E  +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG ++IYG 
Sbjct: 130 SAHDLIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++ I+  F FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGARS-----SGIFMGILSIAVGFLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIAFAQ 308
           G+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A AQ
Sbjct: 245 GSPTPVTAFLSIAPKISI---SANILRVSIYGSYGATLQQIFFFCSIASMILGALAAMAQ 301

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           TK KR LA+SSI HVG+I    S     G  SL+  + IY L+ +  FA + +LR  R  
Sbjct: 302 TKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVSALRQTR-- 359

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    Y L
Sbjct: 360 -----VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFL 414

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPN 487
               +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +   +T   L P+
Sbjct: 415 APVGVVTSVIGRFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSFFITSSLLYPS 473

emb|CAC21201.1| NADH dehydrogenase subunit 2 [Tortula latifolia]
(417 aa)

Score: 290 bits (741), Expect: 1.52529e-75
Length: 431, Idn/Pos/Gap = 169/258/21 (39%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNTLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKKESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRNSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

emb|CAC20597.1| NADH dehydrogenase subunit 2 [Isothecium alopecurum]
emb|CAC20791.1| NADH dehydrogenase subunit 2 [Pohlia nutans]
emb|CAC20670.1| NADH dehydrogenase subunit 2 [Mnium hornum]
emb|CAC20768.1| NADH dehydrogenase subunit 2 [Pterogonium gracile]
emb|CAC21196.1| NADH dehydrogenase subunit 2 [Thamnobryum alopecurum]
emb|CAC20644.1| NADH dehydrogenase subunit 2 [Leskea polycarpa]
emb|CAC21445.1| NADH dehydrogenase subunit 2 [Plagiopus oederi]
(417 aa)

Score: 289 bits (740), Expect: 1.75774e-75
Length: 381, Idn/Pos/Gap = 158/235/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

emb|CAC20246.1| NADH dehydrogenase subunit 2 [Hedwigia ciliata]
(417 aa)

Score: 289 bits (740), Expect: 1.92671e-75
Length: 431, Idn/Pos/Gap = 169/258/21 (39%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVSIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

emb|CAC20902.1| NADH dehydrogenase subunit 2 [Rhacocarpus purpurascens]
gb|ABX25850.1| NADH dehydrogenase subunit 2 [Bryobrittonia longipes]
gb|ABX25855.1| NADH dehydrogenase subunit 2 [Blindia acuta]
gb|ACZ34317.1| NADH dehydrogenase subunit 2 [Timmia norvegica]
gb|ACZ34321.1| NADH dehydrogenase subunit 2 [Catoscopium nigritum]
(417 aa)

Score: 289 bits (740), Expect: 2.18359e-75
Length: 431, Idn/Pos/Gap = 169/258/21 (39%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

gb|ABX25856.1| NADH dehydrogenase subunit 2 [Timmiella sp. VKLBN991028]
(417 aa)

Score: 289 bits (740), Expect: 2.23893e-75
Length: 431, Idn/Pos/Gap = 168/258/21 (38%/59%/4%)

Query:  39 YGYPILSKNFGYLVVITFTYILFLIIN-TPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    + L+ + TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITMLLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

emb|CAC19868.1| NADH dehydrogenase subunit 2 [Atrichum undulatum]
(421 aa)

Score: 289 bits (740), Expect: 2.23893e-75
Length: 442, Idn/Pos/Gap = 173/262/39 (39%/59%/8%)

Query:  39 YGYPILSKNFGYLVVITFTY---ILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVG  95
           Y YP L  N  +L +++ +Y   I  L++ +   L+    +  F+NN +    T F    
Sbjct:   2 YDYPPLVCNVSWLGLLSVSYRYLITILLVASSAPLTV---ANLFYNNLIIDNFTYF----  54

Query:  96 ICYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEM 145
            C +FL +S  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+
Sbjct:  55 -CQIFLSVSTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIEL 113

Query: 146 LNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ 205
            +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F 
Sbjct: 114 QSLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFT 173

Query: 206 ----SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFII 261
               ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I
Sbjct: 174 GYEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSI 228

Query: 262 FTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSIN 321
             KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI 
Sbjct: 229 APKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIG 286

Query: 322 HVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFT 381
           HVG++ I  S     G  SL+  + IY+L+ + +FA +L+LR       NH  +YI++  
Sbjct: 287 HVGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQ------NH-FKYIADLG 339

Query: 382 ILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATF 441
            L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ F
Sbjct: 340 ALAKTNPILAITLSITMFSYAGIPPLAGFRSKFYLFFAALGCGAYLLALIGVVTSVISCF 399

Query: 442 YYIRIIKIIYFDNCNVWLIYVP 463
           YYIR +KI+YFD    W++Y P
Sbjct: 400 YYIRFVKIMYFDTPKKWILYKP 421

gb|AEN56103.1| NADH dehydrogenase subunit 2 [Cucumis melo subsp. melo]
(488 aa)

Score: 289 bits (739), Expect: 2.27661e-75
Length: 476, Idn/Pos/Gap = 176/269/29 (36%/56%/6%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE++L    FILLI+G+ +ST+K   YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFLINATFILLIHGVVFSTSKKDSYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGIC-YVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            F + F   ++L +   I LL+     + +   +   E+ + FEF +L  L   S+  +I
Sbjct:  70 LFWNHFLRRDNLTYFCQILLLLSTAGTISMCFDSFFKERFDAFEFIVLIPLPTRSMLFMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  D +S+Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG ++IYG 
Sbjct: 130 SAHDSISMYLAIEPQSLCFYVMAASKRKSEFSTEAGSKYLILGAFSSGILLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + L +G++ I+  F FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGARS-----SGLFMGILSIAVGFLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINL-----FGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           G+ T +     I  KI+IF     L     +G +L E+F         C+  S+ LG   
Sbjct: 245 GSPTPVTAFLSIAPKISIFANISRLSIYGSYGATLQEIF-------FFCSIASMILGALA 297

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A AQTK KR LA+SSI HVG+I    S     G  SL+  ++IY+L+ +  FA +L+LR 
Sbjct: 298 AMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAFAIVLALRQ 357

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L   
Sbjct: 358 TR-------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCG 410

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
            Y L    +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 411 AYFLAPVGVVTSVIGRFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFIT 466

emb|CAC20152.1| NADH dehydrogenase subunit 2 [Encalypta streptocarpa]
(417 aa)

Score: 289 bits (739), Expect: 2.33432e-75
Length: 431, Idn/Pos/Gap = 169/258/21 (39%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFRSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

gb|ABX25852.1| NADH dehydrogenase subunit 2 [Discelium nudum]
(417 aa)

Score: 289 bits (739), Expect: 2.62356e-75
Length: 381, Idn/Pos/Gap = 157/235/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL++S  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLVSTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

gb|ACZ34318.1| NADH dehydrogenase subunit 2 [Chamaebryum pottioides]
(408 aa)

Score: 288 bits (738), Expect: 2.99826e-75
Length: 381, Idn/Pos/Gap = 157/235/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL++S  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  42 CQIFLLVSTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 101

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A ++R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 102 SLCFYVIAALKRNSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 161

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 162 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 216

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 217 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 274

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY L+ + +FA +L+LR  R        +YI++   
Sbjct: 275 VGYLFIGFSCGTIEGIQSLLIGVFIYALMTINVFAIVLALRQNR-------FKYIADLGA 327

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 328 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 387

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 388 YIRFVKIMYFDTPKRWILYKP 408

emb|CAC20934.1| NADH dehydrogenase subunit 2 [Schistostega pennata]
(417 aa)

Score: 288 bits (738), Expect: 3.23208e-75
Length: 381, Idn/Pos/Gap = 158/234/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFKEESLNAFESIVLILLSTRSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKIAILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

emb|CAC19938.1| NADH dehydrogenase subunit 2 [Ceratodon purpureus]
(417 aa)

Score: 288 bits (738), Expect: 3.34177e-75
Length: 431, Idn/Pos/Gap = 168/259/21 (38%/60%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRNSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR        + ++YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALR-------QNCLKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

gb|ACZ34319.1| NADH dehydrogenase subunit 2 [Gigaspermum repens]
(417 aa)

Score: 288 bits (738), Expect: 3.51332e-75
Length: 431, Idn/Pos/Gap = 168/259/21 (38%/60%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A +
Sbjct:  61 STIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAL 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I    
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFLC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++ + L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLSALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

emb|CAC21197.1| NADH dehydrogenase subunit 2 [Timmia megapolitana subsp. bavarica]
(417 aa)

Score: 288 bits (738), Expect: 3.69369e-75
Length: 431, Idn/Pos/Gap = 169/258/21 (39%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLSFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

emb|CAC20216.1| NADH dehydrogenase subunit 2 [Funaria hygrometrica]
(417 aa)

Score: 288 bits (737), Expect: 3.94865e-75
Length: 381, Idn/Pos/Gap = 157/234/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL++S  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLVSTASTIVMCLGYFKEESLNAFESIILILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFGELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKIAILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

gb|ABX25853.1| NADH dehydrogenase subunit 2 [Grimmia cribrosa]
(417 aa)

Score: 288 bits (737), Expect: 4.29226e-75
Length: 438, Idn/Pos/Gap = 173/260/39 (39%/59%/8%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++       F+NN +  I T F     C
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVAN-----LFYNNLIIDIFTYF-----C  51

Query:  98 YVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLN 147
            +FL++S  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +
Sbjct:  52 QIFLLVSTASTIIMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQS 111

Query: 148 LIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ-- 205
           L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F   
Sbjct: 112 LCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGY 171

Query: 206 --SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFT 263
             ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  
Sbjct: 172 EITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAP 226

Query: 264 KITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHV 323
           KI+I    I +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HV
Sbjct: 227 KISILANMIRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHV 284

Query: 324 GFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTIL 383
           G++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L
Sbjct: 285 GYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADCGAL 337

Query: 384 SKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYY 443
           +KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYY
Sbjct: 338 AKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYY 397

Query: 444 IRIIKIIYFDNCNVWLIY 461
           IR +KI+YFD    W++Y
Sbjct: 398 IRFVKIMYFDTPKKWILY 415

gb|ACZ34316.1| NADH dehydrogenase subunit 2 [Timmia austriaca]
(417 aa)

Score: 288 bits (737), Expect: 4.36448e-75
Length: 431, Idn/Pos/Gap = 169/257/21 (39%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG  T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGXPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

ref|YP_001326593.1| NADH dehydrogenase subunit N [Sinorhizobium medicae WSM419]
gb|ABR59758.1| proton-translocating NADH-quinone oxidoreductase, chain N [Sinorhizobium medicae WSM419]
(480 aa)

Score: 288 bits (737), Expect: 4.66576e-75
Length: 450, Idn/Pos/Gap = 153/261/19 (34%/58%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           I+ + + +PEL L +    LL+ G+F S       P ++   G  V +     L+L++ T
Sbjct:   7 IASLQLSMPELILAVGAMALLMIGVFSSERAT---PTVT---GLAVAVLIIAGLWLVLKT  60

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            +     +   F  +   K++K + L+  I  + + + +    +++ FEF +L +L+ L 
Sbjct:  61 GE--GAAYGGAFLSDPFAKFMKVLALIGSITVMVMTVGHARSAQIDRFEFPVLLVLATLG 118

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           + L+IS  DL+S+Y+SLE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++
Sbjct: 119 MLLMISANDLISLYLSLELQSLALYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGMS 178

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G T F +++    ++  E   L     L+ GLVFI     FK+SA PFHMW+PD
Sbjct: 179 LVYGFTGHTGFDEIA---AALTAEGRSL----GLVFGLVFILAGLAFKISAVPFHMWTPD 231

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  T +   F    KI    + + +   +   +   WQ++ +  +  S+ LG+F A 
Sbjct: 232 VYEGAPTPVTAFFAAGPKIAAISILVRIVINAFEPVVADWQQIVVFISIASMLLGSFAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q   KR +AYSSI H+G+ ++ +++ +  G   +I YM+IY+++ LG FA +L++R   
Sbjct: 292 GQRNIKRLMAYSSIGHMGYALVGLAAGSMAGVRGVILYMLIYMVMTLGTFACILAMRR-- 349

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             +    +  I +   LS+T+P +A  + I++FS++GIPP+AGFF K  VF+  +++ LY
Sbjct: 350 --REGEHVEGIDDLAGLSQTNPFMATVLTILMFSLAGIPPLAGFFGKYFVFVAAIEAHLY 407

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           +L I  +  S +  +YY+R+IK+++F+   
Sbjct: 408 ALAIIGVLASVVGAYYYLRVIKVMWFEEPR 437

emb|CAC20737.1| NADH dehydrogenase subunit 2 [Orthodicranum montanum]
(417 aa)

Score: 288 bits (737), Expect: 4.66576e-75
Length: 435, Idn/Pos/Gap = 170/258/29 (39%/59%/6%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNN----SLKWIKTIFLL  93
           Y YP L  N  +L +++    IL +  +TP  ++       F+NN    +  +   IFLL
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVAN-----LFYNNLIIDNFTYFCQIFLL  56

Query:  94 VGICY-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYV 152
           V     + + +     E LN FE  +L  L   S+  +IS +DL+++Y+++E+ +L FYV
Sbjct:  57 VSTASTIVMCLGYFKEESLNAFESIVLISLPTCSMLFMISAYDLIAMYLAIELQSLCFYV 116

Query: 153 LATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIM 208
           +A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++ 
Sbjct: 117 IAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLF 176

Query: 209 KEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIF 268
             +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I 
Sbjct: 177 GAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISIL 231

Query: 269 FLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMI 328
              + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I
Sbjct: 232 ANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFI 289

Query: 329 AVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHP 388
             S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+P
Sbjct: 290 GFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNP 342

Query: 389 IIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIK 448
           I+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  + IS ++ FYYIR +K
Sbjct: 343 ILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVISVISCFYYIRFVK 402

Query: 449 IIYFDNCNVWLIYVP 463
           I+YFD    W++Y P
Sbjct: 403 IMYFDTPKKWILYKP 417

ref|YP_002825602.1| NADH dehydrogenase subunit N [Sinorhizobium fredii NGR234]
gb|ACP24849.1| NADH dehydrogenase I chain N [Sinorhizobium fredii NGR234]
(480 aa)

Score: 288 bits (737), Expect: 4.70485e-75
Length: 442, Idn/Pos/Gap = 156/257/19 (35%/58%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PEL L +   +LL+ G++ S       P+++   G  V +     L+L++NT D     +
Sbjct:  15 PELILAVGALVLLMVGVYSSERAA---PVVT---GLSVAVLIVAGLWLVLNTGD--GEAY  66

Query:  75 PSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTF 134
              F  +   K++K + L+  I  + + I      +++ FEF +L +L+ L + L+IS  
Sbjct:  67 AGAFLSDPFAKFMKILALIGSITVMIMTIGQAKAAQIDRFEFPVLLLLATLGMLLMISAN 126

Query: 135 DLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGI 194
           DL+S+Y+SLE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+YG  G 
Sbjct: 127 DLISLYLSLELQSLALYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGMSLVYGFTGH 186

Query: 195 TNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTS 254
           T F +++    ++  E   L     L+ GLVFI     FK+SA PFHMW+PDVYEG  T 
Sbjct: 187 TGFDEIA---AALTAEGRSL----GLVFGLVFILAGLAFKISAVPFHMWTPDVYEGAPTP 239

Query: 255 IITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRF 314
           +   F    K+    +F+ +   +   +   WQ++ +  +  S+ LG F A  Q   KR 
Sbjct: 240 VTAFFAAAPKVAAMSIFVRIVIEAFEPVVADWQQIVVFISIASMLLGAFAAIGQRNIKRL 299

Query: 315 LAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQI 374
           +AYSSI H+G+ ++ +++ +  G   +I YM+IY+++ LG FA +L++R     K    +
Sbjct: 300 MAYSSIGHMGYALVGLAAGSMAGVRGVILYMLIYMVMTLGTFACILAMRR----KDGEHV 355

Query: 375 RYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAIT 434
             I +   LS+T+P +A  + I++FS++GIPP+AGFF K  VF+  +++ LY L I  + 
Sbjct: 356 EGIDDLAGLSQTNPFMATVLTILMFSLAGIPPLAGFFAKYFVFVAAIEAQLYGLAIIGVL 415

Query: 435 ISCLATFYYIRIIKIIYFDNCN 456
            S +  +YY+R+IK+++FD   
Sbjct: 416 ASVVGAYYYLRVIKVMWFDEAK 437

ref|YP_004935348.1| NADH dehydrogenase subunit 2 (mitochondrion) [Silene vulgaris]
gb|AEM46194.1| NADH dehydrogenase subunit 2 (mitochondrion) [Silene vulgaris]
gb|AFI44308.1| NADH dehydrogenase subunit 2 (mitochondrion) [Silene vulgaris]
gb|AFI44331.1| NADH dehydrogenase subunit 2 (mitochondrion) [Silene vulgaris]
(488 aa)

Score: 288 bits (737), Expect: 4.8241e-75
Length: 480, Idn/Pos/Gap = 175/272/37 (36%/56%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE++L    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFLINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   IFLL      + +C+ F        E+ + FEF +L  L   S
Sbjct:  70 LFWNNFFKRDNFTYFCQIFLLLSTAGTISMCFDFF-----EQERFDAFEFIVLISLPTRS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS  DL+++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAHDLIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEI-PTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +IYG  G T+F  L+     I+    I  +  + + +G++FI+    FK++A PFHMW+P
Sbjct: 185 MIYGSTGATHFDQLA----KILTGYEITGVRSSGIFMGILFIAVGSLFKITAVPFHMWAP 240

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLFL 300
           D+YEG+ T +   F I  KI+I    + +F     G +L ++F         C+  S+ L
Sbjct: 241 DIYEGSPTPVTAFFSIAPKISISANILRVFIYGSYGATLQQIF-------FFCSIASMIL 293

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G   A AQTK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + 
Sbjct: 294 GALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGLFIYASMTIDAFAIVS 353

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +LR  R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   
Sbjct: 354 ALRQTR-------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAA 406

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           L    Y L    +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +   +T
Sbjct: 407 LGCGAYFLAPVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSSFIT 466

emb|CAC20113.1| NADH dehydrogenase subunit 2 [Diphyscium sessile]
(417 aa)

Score: 288 bits (736), Expect: 6.04303e-75
Length: 431, Idn/Pos/Gap = 168/257/21 (38%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNTLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +F  +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFPYAGIPPLAGFRSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

ref|NP_085584.1| NADH dehydrogenase subunit 2 [Arabidopsis thaliana]
emb|CAA65381.1| NADH-ubiquinone oxidoreductase [Arabidopsis thaliana]
emb|CAA69771.3| NADH dehydrogenase subunit 2 [Arabidopsis thaliana]
gb|AEK01252.1| nad2 [Arabidopsis thaliana]
gb|AEK01332.1| nad2 [Arabidopsis thaliana]
(499 aa)

Score: 288 bits (736), Expect: 6.5143e-75
Length: 479, Idn/Pos/Gap = 171/271/21 (35%/56%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYL--VVITFTYILFLIINTPDFLST  72
           PE+++     ILLI+G+ +ST+K Y YP L+ N G+L  + +  T +L         ++ 
Sbjct:  21 PEIFIINATSILLIHGVVFSTSKKYDYPPLASNVGWLGLLSVLITLLLLAAGAPLLTIAH  80

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGIC-YVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            F +  F  ++  +   IFLL+     + +   +   E+ + FEF +L  L    +  +I
Sbjct:  81 LFWNNLFRRDNFTYFCQIFLLLSTAGTISMCFDSSDQERFDAFEFIVLIPLPTRGMLFMI 140

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  DL+++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG ++IYG 
Sbjct: 141 SAHDLIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFSSGILLFGCSMIYGS 200

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++ I+  F FK++A PFHMW+PD+YE
Sbjct: 201 TGATHFDQLAKILTGYEITGARS-----SGIFMGILSIAVGFLFKITAVPFHMWAPDIYE 255

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIAFAQ 308
           G+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A AQ
Sbjct: 256 GSPTPVTAFLSIAPKISIS---ANILRVSIYGSYGATLQQIFFFCSIASMILGALAAMAQ 312

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           TK KR LA+SSI HVG+I    S     G  SL+  + IY L+ +  FA + +LR  R  
Sbjct: 313 TKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVSALRQTR-- 370

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    Y L
Sbjct: 371 -----VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFL 425

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPN 487
               +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +   +T   L P+
Sbjct: 426 APVGVVTSVIGRFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSFFITSSLLYPS 484

emb|CAC19870.1| NADH dehydrogenase subunit 2 [Buxbaumia aphylla]
(417 aa)

Score: 288 bits (736), Expect: 6.5143e-75
Length: 381, Idn/Pos/Gap = 158/235/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTVAMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F  K++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLSKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMLRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLISVFIYVLMTINVFAVVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ II+FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSIIMFSYAGIPPLAGFCSKFYLFFAALGCGSYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

emb|CAC21171.1| NADH dehydrogenase subunit 2 [Scorpidium scorpioides]
(417 aa)

Score: 287 bits (734), Expect: 9.64226e-75
Length: 381, Idn/Pos/Gap = 157/234/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALPAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+ R  R        +YI++   
Sbjct: 284 VGYLFIGSSCGTIEGIQSLLIGVFIYVLMTINVFAIVLASRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

emb|CAC19837.1| NADH dehydrogenase subunit 2 [Andreaea nivalis]
(417 aa)

Score: 287 bits (734), Expect: 9.80452e-75
Length: 430, Idn/Pos/Gap = 165/254/19 (38%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +   TP  ++  F +    +N   + +   LL    
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVAAGTPLTVANLFYNNLIIDNFTYFCQIFLLLSTAS  61

Query:  98 YVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIR 157
            + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  +
Sbjct:  62 TIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASK 121

Query: 158 RTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKSI 213
           R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S 
Sbjct: 122 RDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS- 180

Query: 214 LEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFIN 273
               + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    + 
Sbjct: 181 ----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMVR 236

Query: 274 LFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSI 333
           +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S  
Sbjct: 237 VFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSCG 294

Query: 334 NYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFS 393
              G  SL+  + I++L+ + +FA +L+LR  R        +YI++   L+KT+PI A +
Sbjct: 295 TIEGIQSLLIGVFIHVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPISAIT 347

Query: 394 ILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFD 453
           + I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YFD
Sbjct: 348 LSITMFSYAGIPPLAGFRSKFYLFFAALGCGAYLLALIGVITSVISRFYYIRFVKIMYFD 407

Query: 454 NCNVWLIYVP 463
               W++Y P
Sbjct: 408 TPKTWILYKP 417

ref|YP_005031301.1| NADH-quinone oxidoreductase, subunit N [Azospirillum brasilense Sp245]
emb|CCC97870.1| NADH-quinone oxidoreductase, subunit N [Azospirillum brasilense Sp245]
(482 aa)

Score: 287 bits (734), Expect: 1.03942e-74
Length: 483, Idn/Pos/Gap = 156/261/19 (32%/54%/3%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
           DI+  +PE++L      LL+ G+F            ++  GY+ ++       L +    
Sbjct:   7 DIWPALPEIFLACAGMALLLIGVFRGDG-------FTRPIGYMTMVALLLAAILTMGYGT  59

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
                F   F  +    ++K + L+     V L +     EK+  FEF +L + + L + 
Sbjct:  60 GRVVTFNGLFVMDAFGVFMKVLILVAASLSVLLALGFNEREKMARFEFPVLMLFATLGML 119

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           +++S  DL+S+Y+ LE  +L  YV+A  RR S  S+EAGLKYF+LG  S+G+LL+G +++
Sbjct: 120 MMVSANDLISLYVGLETQSLALYVIAAFRRDSAKSSEAGLKYFVLGSLSSGMLLYGASMV 179

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F  ++  F               +++GLVF+     FK+SA PFHMW+PDVY
Sbjct: 180 YGFAGTTSFDKIAALFAGGAHPS------VGVIIGLVFVVAGLAFKISAVPFHMWTPDVY 233

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +   F    K+    L   L       L + WQ++ ++ +  S+ LG F A  Q
Sbjct: 234 EGAPTPVTAFFAAAPKVAAIALVTRLLIEPFGHLAHQWQQIIIVSSILSMSLGAFAAITQ 293

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           +  KR +AYSSI HVG+ ++ ++S    G   ++ YM +YI++N+G FA +L ++     
Sbjct: 294 SNIKRLMAYSSIGHVGYALVGLASGTQEGVRGVLIYMAVYIVMNIGTFAVILCMK----- 348

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           +    +  I +   LS+T+P++A ++ + +FS++GIPP+AGFF+KL VFL  +++ LY+L
Sbjct: 349 QQGRMVEEIKDLAGLSRTNPLLAGAMAVFMFSMAGIPPMAGFFSKLYVFLAAIEAQLYTL 408

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNL 488
            +  +  S +  +YY+RIIKI+YFD        +  D     +++  +  L FF + P  
Sbjct: 409 AVIGVLTSVVGAYYYLRIIKIMYFDEPVEAFDKIGDDGMTGILIATGLFTLLFFVV-PAP 467

Query: 489 IIN 491
           I+N
Sbjct: 468 ILN 470

emb|CAC21215.1| NADH dehydrogenase subunit 2 [Tetraphis pellucida]
(421 aa)

Score: 287 bits (734), Expect: 1.04813e-74
Length: 437, Idn/Pos/Gap = 169/260/29 (38%/59%/6%)

Query:  39 YGYPILSKNFGYLVVITFTY---ILFLIINTPDFLSTYFPSFFFFNN----SLKWIKTIF  91
           Y YP L  N  +L +++ +Y   I  L++ +   L+    +  F+NN    +  +   IF
Sbjct:   2 YDYPPLVCNVSWLGLLSVSYRYLITILLVASSAPLTV---ANLFYNNLIIDNFTYFCQIF  58

Query:  92 LLVGICY-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIF 150
           LLV     + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L F
Sbjct:  59 LLVSTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCF 118

Query: 151 YVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----S 206
           YV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     +
Sbjct: 119 YVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEIT 178

Query: 207 IMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKIT 266
           +   +S     + + +G++FI+  F  K++A PFHMW+PDVYEG+ T +   F I  KI+
Sbjct: 179 LFGAQS-----SGIFMGILFIAVGFLSKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKIS 233

Query: 267 IFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFI 326
           I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++
Sbjct: 234 ILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYL 291

Query: 327 MIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKT 386
            I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT
Sbjct: 292 FIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKT 344

Query: 387 HPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRI 446
           +PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR 
Sbjct: 345 NPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRF 404

Query: 447 IKIIYFDNCNVWLIYVP 463
           +KI+YFD    W++Y P
Sbjct: 405 VKIMYFDTPKKWILYKP 421

gb|AFI44275.1| NADH dehydrogenase subunit 2 (mitochondrion) [Silene vulgaris]
(488 aa)

Score: 287 bits (734), Expect: 1.06577e-74
Length: 480, Idn/Pos/Gap = 174/272/37 (36%/56%/7%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   IFLL      + +C+ F        E+ + FEF +L  L   S
Sbjct:  70 LFWNNFFKRDNFTYFCQIFLLLSTAGTISMCFDFF-----EQERFDAFEFIVLISLPTRS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           +  +IS  DL+++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG +
Sbjct: 125 MLFMISAHDLIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFSSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEI-PTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +IYG  G T+F  L+     I+    I  +  + + +G++FI+    FK++A PFHMW+P
Sbjct: 185 MIYGSTGATHFDQLA----KILTGYEITGVRSSGIFMGILFIAVGSLFKITAVPFHMWAP 240

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSLFL 300
           D+YEG+ T +   F I  KI+I    + +F     G +L ++F         C+  S+ L
Sbjct: 241 DIYEGSPTPVTAFFSIAPKISISANILRVFIYGSYGATLQQIF-------FFCSIASMIL 293

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G   A AQTK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + 
Sbjct: 294 GALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGLFIYASMTIDAFAIVS 353

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           +LR  R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   
Sbjct: 354 ALRQTR-------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAA 406

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           L    Y L    +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +   +T
Sbjct: 407 LGCGAYFLAPVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSSFIT 466

ref|YP_005188323.1| NADH dehydrogenase I subunit N [Sinorhizobium fredii HH103]
emb|CCE95498.1| NADH dehydrogenase I chain N [Sinorhizobium fredii HH103]
(480 aa)

Score: 287 bits (734), Expect: 1.0747e-74
Length: 449, Idn/Pos/Gap = 154/260/19 (34%/57%/4%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           + + + +PEL L +   +LL+ G++ S       P+++   G  V +     L+L++NT 
Sbjct:   8 ASLQLSVPELILAVGALVLLMVGVYSSERAA---PVVT---GLSVAVLIVAGLWLVLNTG  61

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
           D     +   F  +   K++K + L+  +  + + I      +++ FEF +L +L+ L +
Sbjct:  62 D--GEAYAGAFLSDPFAKFMKVLALIGSVTVMIMTIGQARAAQIDRFEFPVLLLLATLGM 119

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS  DL+S+Y+SLE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L
Sbjct: 120 LLMISANDLISLYLSLELQSLALYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGMSL 179

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           +YG  G T F +++    ++  E   L     L+ GLVFI     FK+SA PFHMW+PDV
Sbjct: 180 VYGFTGHTGFDEIA---AALTAEGRSL----GLVFGLVFILAGLAFKISAVPFHMWTPDV 232

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFA 307
           YEG  T +   F    K+    + + +   +   +   WQ++ +  +  S+ LG F A  
Sbjct: 233 YEGAPTPVTAFFAAAPKVAAMSILVRIVIEAFEPVVADWQQIVVFISIASMLLGAFAAIG 292

Query: 308 QTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRN 367
           Q   KR +AYSSI H+G+ ++ +++ +  G   +I YM+IY+++ LG FA +L++R    
Sbjct: 293 QRNIKRLMAYSSIGHMGYALVGLAAGSMAGVRGVILYMLIYMVMTLGTFACILAMRR--- 349

Query: 368 YKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYS 427
            K    +  I +   LS+T+P +A  + I++FS++GIPP+AGFF K  VF+  +++ LY 
Sbjct: 350 -KDGEHVEGIDDLAGLSQTNPFMATVLTILMFSLAGIPPLAGFFAKYFVFVAAIEAQLYG 408

Query: 428 LVIFAITISCLATFYYIRIIKIIYFDNCN 456
           L I  +  S +  +YY+R+IK+++FD   
Sbjct: 409 LAIIGVLASVVGAYYYLRVIKLMWFDEAK 437

gb|ABX25857.1| NADH dehydrogenase subunit 2 [Splachnum ampullaceum]
(417 aa)

Score: 287 bits (734), Expect: 1.0747e-74
Length: 381, Idn/Pos/Gap = 157/234/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + + A +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVCAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

ref|YP_003449317.1| NADH dehydrogenase I subunit N [Azospirillum sp. B510]
dbj|BAI72773.1| NADH dehydrogenase I chain N [Azospirillum sp. B510]
(482 aa)

Score: 286 bits (733), Expect: 1.24886e-74
Length: 484, Idn/Pos/Gap = 162/262/19 (33%/54%/3%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
           DI+  +PE++L L+   LL+ G+F            ++   YL ++   +   L +    
Sbjct:   7 DIWPALPEIFLALSGIALLMLGVFRGDG-------FTRPVSYLSIVCMLFAAILAMGYGS  59

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
                F   F  +    ++K + L+     V L +     E++  FEF +L + + L + 
Sbjct:  60 GRVVTFNGMFVMDAFGVFMKALVLVSAAFAVVLSLGFNEREQMARFEFPVLMLFATLGML 119

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           ++IS  D +S+Y+ LE  +L  YV+A  RR S  S+EAGLKYF+LG  S+G+LL+G +++
Sbjct: 120 MMISANDFISLYVGLETQSLALYVIAAFRRDSGKSSEAGLKYFVLGSLSSGMLLYGASMV 179

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F  ++  F           +   L++GLVF+     FK+SAAPFHMW+PDVY
Sbjct: 180 YGFAGTTSFDKVAALF------AGGAHVSPGLVIGLVFVMAGLAFKISAAPFHMWTPDVY 233

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +   F    K+    L   +       L   W ++ +  A  S+ +G+F+A  Q
Sbjct: 234 EGAPTPVTAFFAAAPKVAAIALLTRVVMEPFGHLAAQWHQVLVAAAILSMAIGSFVAIMQ 293

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           T  KR +AYSSI HVG+ ++ +++   +G   ++ YM +YI +N+G FA +LS++     
Sbjct: 294 TNIKRLMAYSSIGHVGYALVGLTTGTQDGVRGVLIYMALYIAMNIGAFAVILSMK----- 348

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                +  I +F+ LSKT+P++A ++ I +FS++GIPP+AGFF KL VFL  + +  Y+L
Sbjct: 349 AKGKMLEEIKDFSGLSKTNPMLAATMAIFMFSMAGIPPMAGFFGKLYVFLAAIAAQEYTL 408

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNL 488
            +  +  S +  FYY+RIIKI+YFD   + +  V  D     VL  + L    F + P  
Sbjct: 409 AVVGVLTSVVGAFYYLRIIKIMYFDEPALVVDKVD-DDGMTGVLVLTSLFTLLFFVAPAP 467

Query: 489 IINS 492
           I+N 
Sbjct: 468 ILNG 471

emb|CAC20735.1| NADH dehydrogenase subunit 2 [Orthodontium lineare]
(417 aa)

Score: 286 bits (733), Expect: 1.24886e-74
Length: 381, Idn/Pos/Gap = 157/234/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +     I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFSSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

emb|CAC20587.1| NADH dehydrogenase subunit 2 [Homalia trichomanoides]
(417 aa)

Score: 286 bits (733), Expect: 1.31297e-74
Length: 381, Idn/Pos/Gap = 157/234/28 (41%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFKEEGLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++   +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSNTMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

emb|CAC20844.1| NADH dehydrogenase subunit 2 [Pottia truncata]
(417 aa)

Score: 286 bits (732), Expect: 1.52574e-74
Length: 431, Idn/Pos/Gap = 168/256/21 (38%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNTLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN  E  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIVMCLGYFKKESLNALESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRNSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K   F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYWFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPKKWILYKP 417

gb|ABS50624.1| NADH dehydrogenase subunit 2 [Arabidopsis thaliana]
gb|ABS50625.1| NADH dehydrogenase subunit 2 [Arabidopsis thaliana]
(463 aa)

Score: 286 bits (732), Expect: 1.57752e-74
Length: 472, Idn/Pos/Gap = 169/269/21 (35%/56%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++     ILLI+G+ +ST+K Y YP L+ N G+L +++    L L+        ++ 
Sbjct:   5 PEIFIINATSILLIHGVVFSTSKKYDYPPLASNVGWLGLLSVLITLLLLAAGAPLLTIAH  64

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGIC-YVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            F +  F  ++  +   IFLL+     + +   +   E+ + FEF +L  L    +  +I
Sbjct:  65 LFWNNLFRRDNFTYFCQIFLLLSTAGTISMCFDSSDQERFDAFEFIVLIPLPTRGMLFMI 124

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  DL+++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG ++IYG 
Sbjct: 125 SAHDLIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFSSGILLFGCSMIYGS 184

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++ I+  F FK++A PFHMW+PD+YE
Sbjct: 185 TGATHFDQLAKILTGYEITGARS-----SGIFMGILSIAVGFLFKITAVPFHMWAPDIYE 239

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIAFAQ 308
           G+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A AQ
Sbjct: 240 GSPTPVTAFLSIAPKISI---SANILRVSIYGSYGATLQQIFFFCSIASMILGALAAMAQ 296

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           TK KR LA+SSI HVG+I    S     G  SL+  + IY L+ +  FA + +LR  R  
Sbjct: 297 TKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVSALRQTR-- 354

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    Y L
Sbjct: 355 -----VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFL 409

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
               +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +   +T
Sbjct: 410 APVGVVTSVIGRFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSFFIT 461

emb|CAC19874.1| NADH dehydrogenase subunit 2 [Bartramia halleriana]
(417 aa)

Score: 286 bits (732), Expect: 1.68641e-74
Length: 435, Idn/Pos/Gap = 169/258/29 (38%/59%/6%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNN----SLKWIKTIFLL  93
           Y YP L  N  +L +++    IL +  +TP  ++       F+NN    +  +   IFLL
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVAFSTPLTVAN-----LFYNNLIIDNFTYFCQIFLL  56

Query:  94 VGICY-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYV 152
           V     + + +     E LN FE  +L +LS  S+  +I  +DL+++Y+++E+ +L FYV
Sbjct:  57 VSTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMILAYDLIAMYLAIELQSLCFYV 116

Query: 153 LATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIM 208
           +A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++ 
Sbjct: 117 IAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLF 176

Query: 209 KEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIF 268
             +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I 
Sbjct: 177 GAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISIL 231

Query: 269 FLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMI 328
              + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I
Sbjct: 232 ANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFI 289

Query: 329 AVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHP 388
             S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+P
Sbjct: 290 GFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNP 342

Query: 389 IIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIK 448
           I+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +K
Sbjct: 343 ILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVK 402

Query: 449 IIYFDNCNVWLIYVP 463
           I+YFD    W++Y P
Sbjct: 403 IMYFDTPKKWILYKP 417

ref|YP_004548441.1| proton-translocating NADH-quinone oxidoreductase chain N [Sinorhizobium meliloti AK83]
ref|YP_006839885.1| NADH-quinone oxidoreductase subunit N 1 [Sinorhizobium meliloti Rm41]
ref|ZP_12976168.1| NADH:ubiquinone oxidoreductase subunit N [Sinorhizobium meliloti CCNWSX0020]
gb|AEG52827.1| proton-translocating NADH-quinone oxidoreductase, chain N [Sinorhizobium meliloti AK83]
gb|EHK75955.1| NADH:ubiquinone oxidoreductase subunit N [Sinorhizobium meliloti CCNWSX0020]
emb|CCM67059.1| NADH-quinone oxidoreductase subunit N 1 [Sinorhizobium meliloti Rm41]
(480 aa)

Score: 286 bits (732), Expect: 1.77299e-74
Length: 450, Idn/Pos/Gap = 150/259/19 (33%/57%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           I+ + + +PEL L +    LL+ G+F         P ++   G  V +     L+L++ T
Sbjct:   7 IASLQLSMPELILAVGAMALLMIGVFSGERAT---PTVT---GLAVAVLIIAGLWLVLKT  60

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            +     +   F  +   K++K + L+  I  + + + +    +++ FEF +L +L+ L 
Sbjct:  61 GE--GEAYGGAFLSDPFAKFMKVLALIGSITVMVMTVGHARSAQIDRFEFPVLLVLATLG 118

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           + L+IS  DL+S+Y+SLE+ +L  YV+A I R S  STEAGLKYF+LG  S+G++L+G++
Sbjct: 119 MLLMISANDLISLYLSLELQSLALYVVAAINRDSVRSTEAGLKYFVLGALSSGMMLYGMS 178

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G T F +++    ++  E   L     L+ GLVFI     FK+SA PFHMW+PD
Sbjct: 179 LVYGFTGHTGFDEIA---AALTAEGRSL----GLVFGLVFILAGLAFKISAVPFHMWTPD 231

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  T +   F    K+    + + +   +   +   WQ++ +  +  S+ LG+F A 
Sbjct: 232 VYEGAPTPVTAFFAAGPKVAAISILVRIVINAFEPVVADWQQIVVFISIASMLLGSFAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q   KR +AYSSI H+G+ ++ +++ +  G   +I YM+IY+++ LG FA +L++R   
Sbjct: 292 GQRNIKRLMAYSSIGHMGYALVGLAAGSMAGVRGVILYMLIYMVMTLGTFACILAMRR-- 349

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             +    +  I +   LS+T+P +A  + I++FS++GIPP+AGFF K  VF+  +++ LY
Sbjct: 350 --REGEHVEGIDDLAGLSQTNPFMATVLTILMFSLAGIPPLAGFFAKYFVFVAAIEAQLY 407

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCN 456
            L I  +  S +  +YY+R+IK+++F+   
Sbjct: 408 GLAIIGVLASVVGAYYYLRVIKVMWFEEPR 437

ref|YP_740397.1| NADH dehydrogenase subunit 2 [Zea mays subsp. parviglumis]
gb|ABF70857.1| NADH dehydrogenase subunit 2 (mitochondrion) [Zea mays subsp. parviglumis]
(488 aa)

Score: 286 bits (731), Expect: 2.14807e-74
Length: 472, Idn/Pos/Gap = 169/268/21 (35%/56%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLST--  72
           PE++L    FILLI+G+ +ST+K   YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFLINATFILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 -YFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            ++ +FF  +N   + + + LL     + +   ++  E+ + FEF +L  L   S+ L+I
Sbjct:  70 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDSVEKERFDAFEFIVLIPLPTRSMLLMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
              DL+++Y+++E+ +L FYV+A  +R SEFSTEAG KY ILG F +G+LLFG ++IYG 
Sbjct: 130 PAHDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGILLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++FI+    FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGSLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIAFAQ 308
           G+ T +     I  KI+I     N+   S+   +    Q++   C+  S+ LG   A AQ
Sbjct: 245 GSPTPVTAFLSIAPKISI---SANMSRVSIVASYGGTLQQIFFFCSIASMILGALAAMAQ 301

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           TK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + +LR  R  
Sbjct: 302 TKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYASMTIDAFAIVPALRQTR-- 359

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   L    Y L
Sbjct: 360 -----VKYIADLGALAKTNPILAMTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFL 414

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
               +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 415 APVGVVTSVIGRFYYIRLAKRMFFDRPRTWILYEPMDRDKSLLLAMTSSFIT 466

emb|CAC20859.1| NADH dehydrogenase subunit 2 [Racomitrium lanuginosum]
(417 aa)

Score: 286 bits (731), Expect: 2.16607e-74
Length: 429, Idn/Pos/Gap = 168/257/21 (39%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIIMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADCGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIY 461
           D    W++Y
Sbjct: 407 DTPKKWILY 415

ref|YP_005713079.1| proton-translocating NADH-quinone oxidoreductase, chain N [Sinorhizobium meliloti BL225C]
gb|AEG03836.1| proton-translocating NADH-quinone oxidoreductase, chain N [Sinorhizobium meliloti BL225C]
(480 aa)

Score: 286 bits (731), Expect: 2.27727e-74
Length: 450, Idn/Pos/Gap = 150/260/19 (33%/57%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           I+++ + +PEL L +    LL+ G+F         P ++   G  V +     L+L++ T
Sbjct:   7 IANLQLSMPELILAVGAMALLMIGVFSGERAT---PTVT---GLAVAVLIIAGLWLVLKT  60

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            +     +   F  +   K++K + L+  I  + + + +    +++ FEF +L +L+ L 
Sbjct:  61 GE--GEAYGGAFLSDPFAKFMKVLALIGSITVMVMTVGHARSAQIDRFEFPVLLVLATLG 118

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           + L+IS  DL+S+Y+SLE+ +L  YV+A I R S  STEAGLKYF+LG  S+G++L+G++
Sbjct: 119 MLLMISANDLISLYLSLELQSLALYVVAAINRDSVRSTEAGLKYFVLGALSSGMMLYGMS 178

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G T F +++    ++  E   L     L+ GLVFI     FK+SA PFHMW+PD
Sbjct: 179 LVYGFTGHTGFDEIA---AALTAEGRSL----GLVFGLVFILAGLAFKISAVPFHMWTPD 231

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  T +   F    K+    + + +   +   +   WQ++ +  +  S+ LG+F A 
Sbjct: 232 VYEGAPTPVTAFFAAGPKVAAISILVRIVINAFEPVVADWQQIIVFISIASMLLGSFAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q   KR +AYSSI H+G+ ++ +++ +  G   +I YM+IY+++ LG FA +L++R   
Sbjct: 292 GQRNIKRLMAYSSIGHMGYALVGLAAGSMAGVRGVILYMLIYMVMTLGTFACILAMRR-- 349

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             +    +  I +   LS+T+P +A  + I++FS++GIPP+AGFF K  VF+  +++ LY
Sbjct: 350 --REGEHVEGIDDLAGLSQTNPFMATVLTILMFSLAGIPPLAGFFAKYFVFVAAIEAQLY 407

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCN 456
            L I  +  S +  +YY+R+IK+++F+   
Sbjct: 408 GLAIIGVLASVVGAYYYLRVIKVMWFEEPR 437

ref|YP_005090405.1| nad2 gene product (mitochondrion) [Boea hygrometrica]
gb|AEK53297.1| NADH dehydrogenase subunit 2 (mitochondrion) [Boea hygrometrica]
(488 aa)

Score: 286 bits (731), Expect: 2.31559e-74
Length: 482, Idn/Pos/Gap = 171/273/27 (35%/56%/5%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLK------WIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            ++ F+NN  +      + + + LL     + +   +   E+ + FEF +L  L   S+ 
Sbjct:  68 -AYLFWNNLFRRDNFTYFCQILLLLSTAGTISMCFDSSEQERFDAFEFIVLIPLPTRSML 126

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
            +IS +D +++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG ++I
Sbjct: 127 FMISAYDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFSSGILLFGCSMI 186

Query: 189 YGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           YG  G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PF+MW+PD
Sbjct: 187 YGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGFLFKITAVPFYMWAPD 241

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIA 305
           +YEG+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A
Sbjct: 242 IYEGSPTPVTAFLSIAPKISI---SANISRVSIYSSYGATLQQIFFFCSIASMILGALAA 298

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
            AQTK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + +LR  
Sbjct: 299 MAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYASMTIDAFAIVSALRQT 358

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   L    
Sbjct: 359 R-------VKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGA 411

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLN 485
           Y L    +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T F   
Sbjct: 412 YFLAPVGVVTSVIGRFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPY 471

Query: 486 PN 487
           P+
Sbjct: 472 PS 473

dbj|BAD66742.1| NADH dehydrogenase subunit 2 [Beta vulgaris subsp. vulgaris]
(488 aa)

Score: 286 bits (731), Expect: 2.47543e-74
Length: 482, Idn/Pos/Gap = 174/268/41 (36%/55%/8%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE++L    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFLINATFILLIHGVIFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLKWIKTIFLLVGICYVFLVISNIS----------LEKLNVFEFFLLFILSI 124
            +  F+NN  K     +     C + L++S              E+ + FEF +L  L  
Sbjct:  68 -AHLFWNNLFKRDNFTYF----CQILLLLSTAGTISMCFDFFEQERFDAFEFIVLISLPT 122

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
            S+  +IS  DL+++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG
Sbjct: 123 RSMLFMISAHDLIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFSSGILLFG 182

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEI-PTDLLLGLVFISTAFFFKLSAAPFHMW 243
            ++IYG  G T+F  L+     I+    I  +  + + +G++FI+    FK++A PFHMW
Sbjct: 183 CSMIYGSTGATHFDQLA----KILTGYEITGVRSSGIFMGILFIAVGSLFKITAVPFHMW 238

Query: 244 SPDVYEGTLTSIITLFIIFTKITIFFLFINLF-----GTSLFELFNVWQKLTLICAFFSL 298
           +PD+YEG+ T +   F I  KI+I    + +F     G +L ++F         C+  S+
Sbjct: 239 APDIYEGSPTPVTAFFSIAPKISISANILRVFIYGSYGATLQQIF-------FFCSIASM 291

Query: 299 FLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFAS 358
            LG   A AQTK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA 
Sbjct: 292 ILGALAAMAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGLFIYASMTIDAFAI 351

Query: 359 LLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFL 418
           + +LR  R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F 
Sbjct: 352 VSALRQTR-------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFF 404

Query: 419 TCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLL 478
             L    Y L    +  S +  FYYIR++K ++FD    W++Y PMD+ K+ +L+ +   
Sbjct: 405 AALGCGAYFLAPVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSF 464

Query: 479 LT 480
           +T
Sbjct: 465 IT 466

gb|ABX25854.1| NADH dehydrogenase subunit 2 [Grimmia donniana]
(417 aa)

Score: 285 bits (730), Expect: 2.60251e-74
Length: 429, Idn/Pos/Gap = 168/257/21 (39%/59%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L  N  +L +++    IL +  +TP  ++  F +    +N   +   IFLLV   
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVANLFYNNLIIDN-FTYFCQIFLLVSTA  60

Query:  98 Y-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATI 156
             + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV+A  
Sbjct:  61 STIIMCLGYFKEESLNAFESIVLILLSTRSMLFMISAYDLIAMYLAIELQSLCFYVIAAS 120

Query: 157 RRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKS 212
           +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S
Sbjct: 121 KRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS 180

Query: 213 ILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFI 272
                + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    +
Sbjct: 181 -----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISILANMV 235

Query: 273 NLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
            +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S 
Sbjct: 236 RVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADCGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIY 461
           D    W++Y
Sbjct: 407 DTPKKWILY 415

ref|NP_385385.1| NADH dehydrogenase subunit N [Sinorhizobium meliloti 1021]
ref|YP_005720813.1| probabable nadh dehydrogenase i chain n transmembrane protein [Sinorhizobium meliloti SM11]
ref|YP_007189851.1| proton-translocating NADH-quinone oxidoreductase, chain N [Sinorhizobium meliloti GR4]
sp|Q92QN9.1|NUON1_RHIME RecName: Full=NADH-quinone oxidoreductase subunit N 1; AltName: Full=NADH dehydrogenase I subunit N 1; AltName: Full=NDH-1 subunit N 1
emb|CAC45858.1| Probable NADH dehydrogenase I chain N transmembrane protein [Sinorhizobium meliloti 1021]
gb|AEH79552.1| probabable nadh dehydrogenase i chain n transmembrane protein [Sinorhizobium meliloti SM11]
gb|AGA06252.1| proton-translocating NADH-quinone oxidoreductase, chain N [Sinorhizobium meliloti GR4]
(480 aa)

Score: 285 bits (730), Expect: 2.92499e-74
Length: 450, Idn/Pos/Gap = 150/259/19 (33%/57%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           I+ + + +PEL L +    LL+ G+F         P ++   G  V +     L+L++ T
Sbjct:   7 IASLQLSMPELILAVGAMALLMIGVFSGERAT---PTVT---GLAVAVLIIAGLWLVLKT  60

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            +     +   F  +   K++K + L+  I  + + + +    +++ FEF +L +L+ L 
Sbjct:  61 GE--GEAYGGAFLSDPFAKFMKVLALIGSITVMVMTVGHARSAQIDRFEFPVLLVLATLG 118

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           + L+IS  DL+S+Y+SLE+ +L  YV+A I R S  STEAGLKYF+LG  S+G++L+G++
Sbjct: 119 MLLMISANDLISLYLSLELQSLALYVVAAINRDSVRSTEAGLKYFVLGALSSGMMLYGMS 178

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G T F +++    ++  E   L     L+ GLVFI     FK+SA PFHMW+PD
Sbjct: 179 LVYGFTGHTGFDEIA---AALTAEGRSL----GLVFGLVFILAGLAFKISAVPFHMWTPD 231

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  T +   F    K+    + + +   +   +   WQ++ +  +  S+ LG+F A 
Sbjct: 232 VYEGAPTPVTAFFAAGPKVAAISILVRIVINAFEPVVADWQQIIVFISIASMLLGSFAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q   KR +AYSSI H+G+ ++ +++ +  G   +I YM+IY+++ LG FA +L++R   
Sbjct: 292 GQRNIKRLMAYSSIGHMGYALVGLAAGSMAGVRGVILYMLIYMVMTLGTFACILAMRR-- 349

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             +    +  I +   LS+T+P +A  + I++FS++GIPP+AGFF K  VF+  +++ LY
Sbjct: 350 --REGEHVEGIDDLAGLSQTNPFMATVLTILMFSLAGIPPLAGFFAKYFVFVAAIEAQLY 407

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCN 456
            L I  +  S +  +YY+R+IK+++F+   
Sbjct: 408 GLAIIGVLASVVGAYYYLRVIKVMWFEEPR 437

ref|ZP_02166612.1| NADH dehydrogenase subunit N [Hoeflea phototrophica DFL-43]
gb|EDQ33410.1| NADH dehydrogenase subunit N [Hoeflea phototrophica DFL-43]
(480 aa)

Score: 285 bits (730), Expect: 2.94949e-74
Length: 448, Idn/Pos/Gap = 156/257/21 (34%/57%/4%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           S + + +PEL L     +LL+ G+F           +       ++I    +L L+I   
Sbjct:   8 SSLQLSLPELMLAGGAMLLLMVGVFSGEKSV----TMVNGLAVALLIAAGLVLVLVIGDG  63

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
           +  +  F S  F     +++K + L+  I  + + + +   E+++ FEF +L +L+ L +
Sbjct:  64 EAYNGAFLSDPF----ARFMKVLALIGSITAMVMTVGHAKAERIDKFEFPVLIVLATLGM 119

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS  DL+++Y+ LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G +L
Sbjct: 120 LLMISANDLIALYMGLELQSLALYVVAAINRDSTRSTEAGLKYFVLGALSSGMLLYGASL 179

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           +YG  G T F +++       +E+S+      L+ GLVF+     FK+SA PFHMW+PDV
Sbjct: 180 VYGYTGHTGFDEIAAAIAG--EERSL-----GLVFGLVFLLAGIAFKISAVPFHMWTPDV 232

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNV-WQKLTLICAFFSLFLGTFIAF 306
           YEG  T +   F    KI    + + +     FE   + WQ++ +  +  S+ LG F A 
Sbjct: 233 YEGAPTPVTAFFAAAPKIAAMAVLVRIV-IEAFEPVTLDWQQIVVFISIGSMLLGAFAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q   KR +AYSSI H+GF ++ +++ +  G   +I YM+IY+++ LG FA +L++R   
Sbjct: 292 GQKNIKRLMAYSSIAHMGFALVGLAAGSQAGVRGVILYMLIYMVMTLGTFACILAMRR-- 349

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             K    +  I +   LS T+P +A  + I++FS++GIPP+AGFF K +VF+  +++ LY
Sbjct: 350 --KEEGNVEQIDDLAGLSSTNPFMALMLTILMFSLAGIPPLAGFFGKYVVFVAAIEAKLY 407

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDN 454
           +L I  +  S +  +YY+RIIKI++FD 
Sbjct: 408 ALAIIGVLASVVGAYYYLRIIKIMWFDQ 435

emb|CAC20605.1| NADH dehydrogenase subunit 2 [Leucobryum glaucum]
(417 aa)

Score: 285 bits (730), Expect: 2.99913e-74
Length: 435, Idn/Pos/Gap = 168/258/29 (38%/59%/6%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNN----SLKWIKTIFLL  93
           Y YP L  N  +L +++    IL +  +TP  ++       F+NN    +  +   IFLL
Sbjct:   2 YDYPPLVCNVSWLGLLSVLITILLVASSTPLTVAN-----LFYNNLIIDNFTYFCQIFLL  56

Query:  94 VGICY-VFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYV 152
           V     + + +     E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ +L FYV
Sbjct:  57 VSTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYV 116

Query: 153 LATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIM 208
           +A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++ 
Sbjct: 117 IAASKRNSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLF 176

Query: 209 KEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIF 268
             +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I 
Sbjct: 177 GAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKISIL 231

Query: 269 FLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMI 328
              + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG++ I
Sbjct: 232 ANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLFI 289

Query: 329 AVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHP 388
             S     G  SL+  + IY+ + + +FA +L+LR  R        +YI++   L++T+P
Sbjct: 290 GFSCGTIEGIQSLLIGVFIYVSMTINVFAIVLALRQNR-------FKYIADLGALAETNP 342

Query: 389 IIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIK 448
           I+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +K
Sbjct: 343 ILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVK 402

Query: 449 IIYFDNCNVWLIYVP 463
           I+YFD    W++Y P
Sbjct: 403 IMYFDTPKKWILYKP 417

ref|ZP_00053880.1| COG1007: NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Magnetospirillum magnetotacticum MS-1]
(487 aa)

Score: 285 bits (730), Expect: 3.23301e-74
Length: 496, Idn/Pos/Gap = 161/277/15 (32%/55%/3%)

Query:   4 IINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLI  63
           +I   D+   +PE+++ +    LL+ G+F   +        +K+   LV++     + L+
Sbjct:   1 MIKTLDLVPVLPEIFMAVAGLALLMLGVFRKEDS-------TKSVSVLVILALGAAMVLV  53

Query:  64 INTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILS 123
            +      T F   F  +    + K + L+       + +  +  EK+  FE+ +L + S
Sbjct:  54 SSLGGDRLTAFNGLFVADRFAGFAKGLVLVASAIATAMSLPYLEREKIGRFEYPVLVLFS 113

Query: 124 ILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLF 183
            L + ++IS  D +++Y+ LE+ +L  YVLA   R +  +TEAGLKYF+LG  ++GLLL+
Sbjct: 114 TLGMMMMISANDFIALYLGLELQSLALYVLAAYNRDNARATEAGLKYFVLGSLASGLLLY 173

Query: 184 GIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMW 243
           G++LIYG  G T+F  L+  F      +  ++    ++ GLVFI     FK+SA PFHMW
Sbjct: 174 GVSLIYGFAGTTSFETLANLFSG--GHEHPIKPNMGIIAGLVFILAGLSFKVSAVPFHMW 231

Query: 244 SPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTF 303
           +PDVYEG  T + + F +  KI    L + +      +L   W+++    A  S+F+G+F
Sbjct: 232 APDVYEGAPTPVTSFFAVAPKIAALCLLVRVMTGPFADLVEQWRQVVTFIAIGSMFVGSF 291

Query: 304 IAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR 363
            A  QT  KR +AYSSI HVGF+++ +++    G   ++ Y+ IY+ +N+G FA +LS+R
Sbjct: 292 AAVVQTNIKRLMAYSSIGHVGFVLVGIAAGTTLGIQGVLIYLAIYLFMNVGAFAVILSMR 351

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
                +    +  I +   LSKTHP++AF + +++FS++G+PP+AGF+ K  VF+  ++S
Sbjct: 352 -----QKGRMVEGIDDLAGLSKTHPMMAFVMAVLMFSMAGVPPLAGFWGKFYVFMAAIES 406

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFC 483
            LY+L I  +  S ++T+YY+RI+K++YFD         P+  S   V++ S L++  F 
Sbjct: 407 GLYTLSILGVLSSVVSTYYYLRIVKVMYFDEPTEAFDK-PVGTSMTLVMAVSTLVILAFT 465

Query: 484 LNPNLIINSIYIISTI 499
           L P  ++ S    + +
Sbjct: 466 LIPAPLVTSAKAAAQV 481

ref|YP_004237258.1| NADH dehydrogenase subunit 2 (mitochondrion) [Ricinus communis]
gb|ADW96022.1| NADH dehydrogenase subunit 2 (mitochondrion) [Ricinus communis]
(488 aa)

Score: 285 bits (729), Expect: 3.82015e-74
Length: 482, Idn/Pos/Gap = 171/272/27 (35%/56%/5%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE+++     ILLI+G+ +ST+K Y YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATSILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLK------WIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            +  F+NN  +      + + + LL     + +   +   E+ + FEF +L +L   S+ 
Sbjct:  68 -AHLFWNNLFRRDNFTYFCQILLLLSTAGTISMCFDSSEQERFDAFEFIVLILLPTRSML 126

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
            +IS  D +++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG F +G+LLFG ++I
Sbjct: 127 FMISAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGILLFGCSMI 186

Query: 189 YGCIGITNFIDLSLFFQS--IMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           YG  G T+F  L+  F    I   +S     + + +G++ I+  F FK++A PFHMW+PD
Sbjct: 187 YGSTGATHFDQLAKIFTGYEITGARS-----SGIFMGILSIAVGFLFKITAVPFHMWAPD 241

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIA 305
           +YEG+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG+  A
Sbjct: 242 IYEGSPTPVTAFLSIAPKISI---SANISRVSIYGSYGATLQQIFFFCSIASMILGSLAA 298

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
            AQTK KR LA+SSI HVG+I    S     G  SL+  + IY L+ +  FA +L+LR  
Sbjct: 299 MAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGLFIYALMTIDAFAIVLALRQT 358

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    
Sbjct: 359 R-------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGA 411

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLN 485
           Y L    +  S +  FYYIR+ K ++FD    W++Y PMD++K+ +L+ +   +T   L 
Sbjct: 412 YFLAPVGVVTSVIGRFYYIRLAKRMFFDTPRTWILYEPMDRNKSLLLAMTSSFITSSFLY 471

Query: 486 PN 487
           P+
Sbjct: 472 PS 473

ref|YP_006666123.1| NADH dehydrogenase subunit 2 (mitochondrion) [Malus x domestica]
emb|CBX33367.1| NADH dehydrogenase subunit 2 (mitochondrion) [Malus x domestica]
(488 aa)

Score: 285 bits (729), Expect: 3.9498e-74
Length: 468, Idn/Pos/Gap = 169/265/27 (36%/56%/5%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLK------WIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            +  F+NN  +      + + + LL     + +   +   E+ + FEF +L  L   S+ 
Sbjct:  68 -AHLFWNNLFRRDNFTYFCQILLLLSTAGTISMCFDSSEQERFDAFEFIVLIPLPTRSML 126

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
            +IS  D +++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG F +G+LLFG ++I
Sbjct: 127 FMISAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGILLFGCSMI 186

Query: 189 YGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           YG  G T+F  L+  L    I   +S     + + +G++ I+  F FK++A PFHMW+PD
Sbjct: 187 YGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILSIAVGFLFKITAVPFHMWAPD 241

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIA 305
           +YEG+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A
Sbjct: 242 IYEGSPTPVTAFLSIAPKISI---SANISRVSIYGSYGATLQQIFFFCSIASMILGALAA 298

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
            AQTK KR LA+SSI HVG+I   +S     G  SL+  + IY L+ +  FA +L+LR  
Sbjct: 299 MAQTKVKRPLAHSSIGHVGYIRTGLSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQT 358

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    
Sbjct: 359 R-------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGA 411

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
           Y L    +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+
Sbjct: 412 YFLAPVGVVTSVIGRFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLA 459

ref|YP_005039634.1| NADH-quinone oxidoreductase subunit N [Azospirillum lipoferum 4B]
emb|CBS87417.1| NADH-quinone oxidoreductase, subunit N [Azospirillum lipoferum 4B]
(482 aa)

Score: 285 bits (728), Expect: 4.40233e-74
Length: 446, Idn/Pos/Gap = 154/247/18 (34%/55%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
           DI+  +PE++L L+   LL+ G+F            ++   YL ++       L +    
Sbjct:   7 DIWPALPEIFLALSGVALLMLGVFRGDG-------FTRPVSYLAIVCMLLAAVLAMGYGS  59

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
                F   F  +    ++K + L+     V L +     E++  FEF +L + + L + 
Sbjct:  60 GRIVTFNGMFVMDAFGVFMKVLVLVSAAFAVVLSLGFNEREQMARFEFPVLMVFATLGML 119

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           ++IS  D +S+Y+ LE  +L  YV+A  RR S  S+EAGLKYF+LG  S+G+LL+G +L+
Sbjct: 120 MMISANDFISLYVGLETQSLALYVIAAFRRDSAKSSEAGLKYFVLGSLSSGMLLYGASLV 179

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F  ++  F           +   L++GLVF+     FK+SAAPFHMW+PDVY
Sbjct: 180 YGFAGTTSFDKVAALF------AGGAHVSPGLVIGLVFVMAGLAFKVSAAPFHMWTPDVY 233

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +   F    K+    L   +       L + W ++ +  A  S+ +G+F+A  Q
Sbjct: 234 EGAPTPVTAFFAAAPKVAAIALLTRVVIEPFGHLADQWHQVLVAAAVLSMVIGSFVAIMQ 293

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           T  KR +AYSSI HVG+ ++ +++   +G   ++ YM +YI +N+G FA +LS++     
Sbjct: 294 TNIKRLMAYSSIGHVGYALVGLTTGTQDGVRGVLIYMALYIAMNIGAFAVILSMK----- 348

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                +  I +F  LSKT+P++A ++ I +FS++GIPP+AGFF KL VFL  + +  Y+L
Sbjct: 349 AKGQMLEEIKDFAGLSKTNPMLAATMAIFMFSMAGIPPMAGFFGKLYVFLAAVAAQEYTL 408

Query: 429 VIFAITISCLATFYYIRIIKIIYFDN 454
            +  +  S +  FYY+RIIKI+YFD 
Sbjct: 409 AVIGVLTSVVGAFYYLRIIKIMYFDE 434

emb|CAC20380.1| NADH dehydrogenase subunit 2 [Hygrohypnum ochraceum]
emb|CAC21214.1| NADH dehydrogenase subunit 2 [Tomentypnum nitens]
(417 aa)

Score: 284 bits (727), Expect: 6.90811e-74
Length: 381, Idn/Pos/Gap = 156/233/28 (40%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F  K++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLSKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+ R  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLASRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

ref|YP_588266.1| NADH dehydrogenase subunit 2 [Zea mays subsp. mays]
ref|YP_588267.1| NADH dehydrogenase subunit 2 [Zea mays subsp. mays]
ref|YP_740370.1| NADH dehydrogenase subunit 2 [Zea perennis]
ref|YP_740423.1| NADH dehydrogenase subunit 2 [Zea luxurians]
ref|YP_762325.1| NADH dehydrogenase subunit 2 [Sorghum bicolor]
ref|YP_762479.1| NADH dehydrogenase subunit 2 [Tripsacum dactyloides]
gb|AAR91195.1| NADH dehydrogenase subunit 2 (mitochondrion) [Zea mays]
gb|AAR91204.1| NADH dehydrogenase subunit 2 (mitochondrion) [Zea mays]
gb|ABE98740.1| NADH dehydrogenase subunit 2 (mitochondrion) [Zea mays subsp. mays]
gb|ABE98770.1| NADH dehydrogenase subunit 2 [Zea mays subsp. mays]
gb|ABF70825.1| NADH dehydrogenase subunit 2 (mitochondrion) [Zea perennis]
gb|ABF70939.1| NADH dehydrogenase subunit 2 (mitochondrion) [Zea mays subsp. mays]
gb|ABG65648.1| NADH dehydrogenase subunit 2 (mitochondrion) [Zea luxurians]
gb|ABI60880.1| NADH dehydrogenase subunit 2 (mitochondrion) [Sorghum bicolor]
gb|ABI74652.1| NADH dehydrogenase subunit 2 (mitochondrion) [Tripsacum dactyloides]
(488 aa)

Score: 284 bits (727), Expect: 7.02435e-74
Length: 472, Idn/Pos/Gap = 169/267/21 (35%/56%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLST--  72
           PE++L    FILLI+G+ +ST+K   YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFLINATFILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 -YFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            ++ +FF  +N   + + + LL     + +   +   E+ + FEF +L  L   S+ L+I
Sbjct:  70 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDSFEKERFDAFEFIVLIPLPTRSMLLMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
              DL+++Y+++E+ +L FYV+A  +R SEFSTEAG KY ILG F +G+LLFG ++IYG 
Sbjct: 130 PAHDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGILLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++FI+    FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGSLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIAFAQ 308
           G+ T +     I  KI+I     N+   S+   +    Q++   C+  S+ LG   A AQ
Sbjct: 245 GSPTPVTAFLSIAPKISI---SANMSRVSIVASYGGTLQQIFFFCSIASMILGALAAMAQ 301

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           TK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + +LR  R  
Sbjct: 302 TKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYASMTIDAFAIVPALRQTR-- 359

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   L    Y L
Sbjct: 360 -----VKYIADLGALAKTNPILAMTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFL 414

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
               +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 415 APVGVVTSVIGRFYYIRLAKRMFFDRPRTWILYEPMDRDKSLLLAMTSSFIT 466

ref|YP_422137.1| NADH dehydrogenase subunit N [Magnetospirillum magneticum AMB-1]
sp|Q2W3J7.1|NUON_MAGSA RecName: Full=NADH-quinone oxidoreductase subunit N; AltName: Full=NADH dehydrogenase I subunit N; AltName: Full=NDH-1 subunit N
dbj|BAE51578.1| NADH:ubiquinone oxidoreductase subunit 2 [Magnetospirillum magneticum AMB-1]
(487 aa)

Score: 284 bits (726), Expect: 8.36957e-74
Length: 496, Idn/Pos/Gap = 159/278/15 (32%/56%/3%)

Query:   4 IINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLI  63
           +I   D+   +PE+++ +    LL+ G+F   +        +K+   LV++     + L+
Sbjct:   1 MIKTLDLVPVLPEIFMAVAGLALLMLGVFRKEDS-------TKSVSVLVILALGAAMVLV  53

Query:  64 INTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILS 123
            +      T F   F  +    + K + L+       + +  +  EK+  FE+ +L + +
Sbjct:  54 SSLGGERLTAFNGLFVADRFAGFAKGLVLVASAIATAMSLPYLEREKIGRFEYPVLVLFA 113

Query: 124 ILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLF 183
            L + ++IS  D +++Y+ LE+ +L  YVLA   R +  +TEAGLKYF+LG  ++GLLL+
Sbjct: 114 TLGMMMMISANDFIALYLGLELQSLALYVLAAYNRDNARATEAGLKYFVLGSLASGLLLY 173

Query: 184 GIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMW 243
           GI+L+YG  G T+F  L+  F         ++    ++ GLVF+     FK+SA PFHMW
Sbjct: 174 GISLLYGFAGTTSFEGLANLFAG--GHDHPIKPNMGIIAGLVFVLAGLSFKVSAVPFHMW 231

Query: 244 SPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTF 303
           +PDVYEG  T + + F +  KI    L + +      +L   W+++    A  S+F+G+F
Sbjct: 232 APDVYEGAPTPVTSFFAVAPKIAALCLLVRVMTGPFADLVEQWRQVVTFIAIGSMFVGSF 291

Query: 304 IAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR 363
            A  QT  KR +AYSSI HVGF+++ +++ +  G   ++ Y+ IY+ +N+G FA +LS+R
Sbjct: 292 AAVVQTNIKRLMAYSSIGHVGFVLVGIAAGSTLGIQGVLIYLAIYLFMNVGAFAVILSMR 351

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
                +    +  I +   LSKTHP++AF + +++FS++G+PP+AGF+ K  VF+  ++S
Sbjct: 352 -----QKGRMVEGIDDLAGLSKTHPMMAFVMAVLMFSMAGVPPLAGFWGKFYVFMAAIES 406

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFC 483
            LY+L I  +  S ++T+YY+RI+K++YFD   V     P+  S   V++ S +++  F 
Sbjct: 407 GLYTLSILGVLSSVVSTYYYLRIVKVMYFDE-PVEAFDKPVGTSMTLVMAVSTIVILAFT 465

Query: 484 LNPNLIINSIYIISTI 499
           L P  ++ S    + +
Sbjct: 466 LIPAPLVTSAKAAAQV 481

ref|YP_514681.1| NADH dehydrogenase subunit 2 [Oryza sativa Indica Group]
ref|YP_002000596.1| NADH dehydrogenase subunit 2 [Oryza sativa Japonica Group]
dbj|BAC19905.1| NADH dehydrogenase subunit 2 [Oryza sativa Japonica Group]
gb|AAZ99285.1| NADH dehydrogenase subunit 2 (mitochondrion) [Oryza sativa Indica Group]
gb|AAZ99339.1| NADH dehydrogenase subunit 2 (mitochondrion) [Oryza sativa Japonica Group]
gb|AAZ99392.1| NADH dehydrogenase subunit 2 (mitochondrion) [Oryza sativa Japonica Group]
gb|AER13006.1| NADH dehydrogenase subunit 2 (mitochondrion) [Oryza sativa Indica Group]
gb|AER13071.1| NADH dehydrogenase subunit 2 (mitochondrion) [Oryza sativa Indica Group]
gb|AEZ03758.1| NADH dehydrogenase subunit 2 (mitochondrion) [Oryza sativa Indica Group]
gb|AEZ03786.1| NADH dehydrogenase subunit 2 (mitochondrion) [Oryza sativa Indica Group]
(488 aa)

Score: 284 bits (726), Expect: 9.32847e-74
Length: 472, Idn/Pos/Gap = 168/268/21 (35%/56%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLST--  72
           PE+++    FILLI+G+ +ST+K   YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 -YFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            ++ +FF  +N   + + + LL     + +   +   E+ +  EF +L  L   S+ L+I
Sbjct:  70 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDSFEKERFDASEFIVLIPLPTRSMLLMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
              DL+++Y+++E+ +L FYV+A  +R SEFSTEAG KY ILG F +G+LLFG ++IYG 
Sbjct: 130 PAHDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGILLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIAFAQ 308
           G+ T +     I  KI+I     N+   S+   +    Q++   C+  S+ LG   A AQ
Sbjct: 245 GSPTPVTAFLSIAPKISI---SANMSRVSIVASYGGTLQQIFFFCSIASMILGALAAMAQ 301

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           TK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + +LR  R  
Sbjct: 302 TKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYASMTIDAFAIVPALRQTR-- 359

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   L    Y L
Sbjct: 360 -----VKYIADLGALAKTNPILAMTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFL 414

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
               +  S +  FYYIR++K ++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 415 APVGVVTSVIGCFYYIRLVKRMFFDRPRTWILYEPMDRDKSLLLAMTSSFIT 466

ref|YP_006371387.1| NADH dehydrogenase subunit N [Tistrella mobilis KA081020-065]
gb|AFK53803.1| NADH dehydrogenase subunit N [Tistrella mobilis KA081020-065]
(481 aa)

Score: 283 bits (725), Expect: 1.03108e-73
Length: 448, Idn/Pos/Gap = 158/257/19 (35%/57%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           + D+   +PEL+L      L++ G+F   +K  G  +LS    +L  I F     LI+  
Sbjct:   6 LPDLAPALPELWLAALALALVVVGVFAGKDKATG--LLS----WLAGIGFAIAAVLIVTG  59

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
           P+     F   F  ++   ++K + L+  +  + +    ++ E +  FE+ LL +L+ + 
Sbjct:  60 PEGRVVTFNGMFVTDSFGAFMKVLVLIASMFSLVMARDYLAREGVVRFEYPLLIVLATVG 119

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           + ++IS+ DL+++Y+ LE+ +L  YVLA  +R S  STEAGLKYF+LG  S+G+LL+G +
Sbjct: 120 MMMMISSNDLIALYMGLELQSLSLYVLAAFKRDSVRSTEAGLKYFVLGALSSGMLLYGCS 179

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G T+F  L+   QS+  + S+      +L+GLVFI     FK+SA PFHMW+PD
Sbjct: 180 LVYGFAGSTSFEALA---QSLQGQPSL-----GVLVGLVFILVGLAFKISAVPFHMWTPD 231

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  TS+   F +  KI    L I +       L + WQ++T   +  S+ L  F A 
Sbjct: 232 VYEGAPTSVSAFFAMAPKIAAMGLLIRVLAEPFGGLVHSWQQITWFISVASMVLAAFAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            QT  KR LAYSSI HVG+ ++ +++   +GF  +  YM IY+ + LG F+ +L +R   
Sbjct: 292 GQTNVKRLLAYSSIGHVGYALVGLTAGTADGFRGVAAYMAIYLFMTLGTFSIVLVMR--- 348

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             +    +  IS+   LS++ P++AF +  ++FS++GIPP+AGF  KL VF   + +   
Sbjct: 349 --RQGRMVEEISDLAGLSRSRPVLAFVMGAMMFSLAGIPPLAGFIGKLFVFRAAVDAGFI 406

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDN 454
            L +  +  S ++ FYY+R++K++YFD 
Sbjct: 407 VLAVIGVASSVVSAFYYLRVVKVMYFDE 434

emb|CAC21176.1| NADH dehydrogenase subunit 2 [Herzogiella seligeri]
(417 aa)

Score: 283 bits (724), Expect: 1.33545e-73
Length: 381, Idn/Pos/Gap = 155/233/28 (40%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L +L+  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFKEESLNAFESIVLILLATCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAG KYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGSKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+    FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGSLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

ref|YP_001419497.1| NADH dehydrogenase subunit N [Xanthobacter autotrophicus Py2]
gb|ABS69840.1| proton-translocating NADH-quinone oxidoreductase, chain N [Xanthobacter autotrophicus Py2]
(476 aa)

Score: 283 bits (724), Expect: 1.38077e-73
Length: 492, Idn/Pos/Gap = 152/269/25 (30%/54%/5%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNF-GYLVVITFTYILFLIIN  65
           +  I   +PEL L ++  +L++ G F            S N    L +     +  L++ 
Sbjct:   5 LPPIGAVLPELVLAVSAIVLILIGAFRGEG--------SANLVTGLAIAVLAAVGVLVLL  56

Query:  66 TPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSIL 125
            P    T F      +   +++K + +L  +  + + +   + EK   FE+ +L +++ L
Sbjct:  57 QPAAEVTAFNGSLVVDAYSRFMKLLAVLGAVVSLIMAVDWQAREKQAKFEYAVLIVIATL 116

Query: 126 SIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGI 185
            + +++S  DL+++Y+ LE+++L  YV+A+I R S  STEAGLKYF+LG  S+G+LL+G 
Sbjct: 117 GMCMLVSAGDLIALYLGLELMSLSLYVVASINRDSVRSTEAGLKYFVLGALSSGMLLYGA 176

Query: 186 ALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           + IYG  G  NF+ ++    ++ KE S       L+ G+VF+     FK+SA PFHMW+P
Sbjct: 177 SFIYGFTGSVNFLQIA----AVAKEPS-----PGLIFGIVFLLAGLCFKVSAVPFHMWTP 227

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIA 305
           DVYEG  T +   F    K+    +F+ +   +   + + WQ++    +  S+ LG F A
Sbjct: 228 DVYEGAPTPVTAFFASAPKVAAMAIFVRVVIEAFPHVTHQWQQIVAFVSLASMVLGAFAA 287

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
             Q   KR LAYSSI H+GF ++ +++    G   ++ YM IY+++ LG FA +L++R  
Sbjct: 288 IGQRNIKRLLAYSSIGHMGFALVGLAAGTAEGVRGVLLYMTIYVVMTLGTFACVLTMR-- 345

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
              +    +  I + + L++ +P++A ++  ++FS++GIPP+AGF  K  VF+  +++ L
Sbjct: 346 ---RKGQAVETIEDLSGLARRNPLMALALGALMFSLAGIPPLAGFLAKYYVFVAAIQAGL 402

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLN 485
           Y+L +  +  S +  FYY+R++KI+YFD       + PM      VL+ S L   F+ + 
Sbjct: 403 YALAVVGVLASVVGAFYYLRVVKIMYFDEPVE--AFDPMPTELKAVLAVSGLFTIFYFVY 460

Query: 486 PNLIINSIYIIS 497
           P  +I +  + +
Sbjct: 461 PAPLIEAAGVAA 472

gb|ABE98698.1| NADH dehydrogenase subunit 2 (mitochondrion) [Zea mays subsp. mays]
(488 aa)

Score: 283 bits (723), Expect: 1.89592e-73
Length: 475, Idn/Pos/Gap = 169/267/27 (35%/56%/5%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE++L    FILLI+G+ +ST+K   YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFLINATFILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLK------WIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            +  F+NN ++      + + + LL     + +   +   E+ + FEF +L  L   S+ 
Sbjct:  68 -AHLFWNNFIRRDNFTYFCQILLLLSTAGTISMCFDSFEKERFDAFEFIVLIPLPTRSML 126

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+I   DL+++Y+++E+ +L FYV+A  +R SEFSTEAG KY ILG F +G+LLFG ++I
Sbjct: 127 LMIPAHDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGILLFGCSMI 186

Query: 189 YGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           YG  G T+F  L+  L    I   +S     + + +G++FI+    FK++A PFHMW+PD
Sbjct: 187 YGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGSLFKITAVPFHMWAPD 241

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIA 305
           +YEG+ T +     I  KI+I     N+   S+   +    Q++   C+  S+ LG   A
Sbjct: 242 IYEGSPTPVTAFLSIAPKISI---SANMSRVSIVASYGGTLQQIFFFCSIASMILGALAA 298

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
            AQTK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + +LR  
Sbjct: 299 MAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYASMTIDAFAIVPALRQT 358

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   L    
Sbjct: 359 R-------VKYIADLGALAKTNPILAMTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGA 411

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           Y L    +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 412 YFLAPVGVVTSVIGRFYYIRLAKRMFFDRPRTWILYEPMDRDKSLLLAMTSSFIT 466

ref|ZP_13490313.1| NAD(P)H-quinone oxidoreductase subunit 2 [Rhizobium sp. PDO1-076]
gb|EHS52903.1| NAD(P)H-quinone oxidoreductase subunit 2 [Rhizobium sp. PDO1-076]
(481 aa)

Score: 283 bits (723), Expect: 2.11314e-73
Length: 450, Idn/Pos/Gap = 152/253/19 (33%/56%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           I+ +++  PEL L +    LL+ G+F S ++  G   ++     L++     +++     
Sbjct:   7 IASLHLVTPELILAVGALALLMIGVF-SGDRATG--TVTGLAVALLLAAGVCVIWFSGEG  63

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
             F   Y    F      +++K + L+  I  + + + +   + L+ FEF +L +L+ L 
Sbjct:  64 EAFNGAYIADGF-----ARFMKILALIGSITAMIMAVGHAKNDHLDKFEFPVLLVLATLG 118

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           I L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++
Sbjct: 119 IMLMISANDLISVYLALELQSLALYVVAAINRDSLRSTEAGLKYFVLGALSSGMLLYGMS 178

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G T F +++          S  E    L+ GLVFI     FK+SA PFHMW+PD
Sbjct: 179 LVYGFTGNTGFDEIAAVL-------SAGEPQLGLIFGLVFIMAGLAFKISAVPFHMWTPD 231

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  T +        KI    +F+ +   +   +F  WQ++ +  +  S+ LG+  A 
Sbjct: 232 VYEGAPTPVTAFLAAAPKIGAMAIFVRIVIDAFLPIFAEWQQIVVFISIASMVLGSVAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q   KR +AYSSI H+G+ ++ +++    G   ++ YM IY+++ LG FA ++++R   
Sbjct: 292 GQRNIKRLMAYSSIGHMGYALVGLAAGTAGGVSGVLLYMAIYLVMTLGTFACIMAMRQ-- 349

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             K    +  I +   LS T P +AF +  ++FS++GIPP+AGFF K  VF+  +++ LY
Sbjct: 350 --KEGGNVENIDDLAGLSTTRPFMAFVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLY 407

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           +L I  +  S +  FYY+RI+K+++FD   
Sbjct: 408 ALAIIGVLASVIGAFYYLRIVKVMWFDEAK 437

ref|YP_002608182.2| NADH dehydrogenase subunit 2 [Carica papaya]
gb|ACB20471.2| NADH dehydrogenase subunit 2 (mitochondrion) [Carica papaya]
(488 aa)

Score: 282 bits (722), Expect: 2.18485e-73
Length: 482, Idn/Pos/Gap = 172/270/27 (35%/56%/5%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE+++     ILLI+G+ +ST+K Y YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATSILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLK------WIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            +  F+NN  +      + + + LL     + +   +   E+ + FEF +L  L   S+ 
Sbjct:  68 -AHLFWNNLFRRDNFTYFCQILLLLSTAGTISMCFDSSEQERFDAFEFIVLIPLPTRSML 126

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
            +IS  D +++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG ++I
Sbjct: 127 FMISAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFSSGILLFGCSMI 186

Query: 189 YGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           YG  G T+F  L+  L    I   +S     + L +G++ I+  F FK++A PFHMW+PD
Sbjct: 187 YGSTGATHFDQLAKILTGYEITGARS-----SGLFMGILSIAVGFLFKITAVPFHMWAPD 241

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIA 305
           +YEG+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A
Sbjct: 242 IYEGSPTPVTAFLSIAPKISI---SANILRVSIYGSYGATLQQIFFFCSIASMILGALAA 298

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
            AQTK KR LA+SSI HVG+I    S     G  SL+  + IY L+ +  FA + +LR  
Sbjct: 299 MAQTKVKRPLAHSSIGHVGYICTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVSALRQT 358

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    
Sbjct: 359 R-------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGA 411

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLN 485
           Y L    +  S +  FYYIR+ K ++FD    W++Y PMD++K+ +L+ +   +T   L 
Sbjct: 412 YFLAPVGVVTSVIGRFYYIRLAKRMFFDTPRTWILYEPMDRNKSLLLAMTSSFITSSFLY 471

Query: 486 PN 487
           P+
Sbjct: 472 PS 473

emb|CAC21203.1| NADH dehydrogenase subunit 2 [Takakia lepidozioides]
(417 aa)

Score: 282 bits (722), Expect: 2.18485e-73
Length: 430, Idn/Pos/Gap = 165/247/19 (38%/57%/4%)

Query:  39 YGYPILSKNFGYL----VVITFTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLV  94
           Y YP L +N  +L    V+IT   IL +    P  ++  F +    +N   + +   LL 
Sbjct:   2 YDYPPLVRNVSWLGSLSVLIT---ILLVAAGAPLTVANLFYNNLIIDNFTYFCQIFLLLS  58

Query:  95 GICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLA 154
               + + +     E LN FE  +   L   S+ L+IS +DL++ Y+++E  +L F+V+A
Sbjct:  59 TASTIVMCLDYFKEESLNAFESIVPISLPTRSMLLMISAYDLIATYLAIEPQSLRFHVIA 118

Query: 155 TIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQSIMKEKSIL 214
             +R SEFSTEAG KYFILG FS G+LLFG ++IYG  G+TNF +L+  F    +  S  
Sbjct: 119 APKRDSEFSTEAGSKYFILGAFSPGILLFGRSMIYGFTGVTNFEELAKIFTG-YENTSFG 177

Query: 215 EIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINL 274
              + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I     N+
Sbjct: 178 AQSSGIFMGILFIAVGFPFKITAVPFHMWAPDVYEGSPTPVTAFFPIAPKISI---LANM 234

Query: 275 FGTSLFELFN-VWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSI 333
              S++  ++  WQ+L L C+  S+ LG   A AQ K KR LAYSSI HVG++ I  S  
Sbjct: 235 VRVSIYSFYDPTWQQLFLFCSIASMILGALAAMAQNKVKRPLAYSSIGHVGYLFIGFSCG 294

Query: 334 NYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFS 393
              G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   L+KT+PI A +
Sbjct: 295 TIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGALAKTNPISAIT 347

Query: 394 ILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFD 453
             I +F  +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YFD
Sbjct: 348 PSITMFPYAGIPPLAGFRSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYFD 407

Query: 454 NCNVWLIYVP 463
               W++Y P
Sbjct: 408 TPKTWILYRP 417

ref|ZP_11177096.1| NADH:ubiquinone oxidoreductase subunit N [Agrobacterium albertimagni AOL15]
gb|EKF58508.1| NADH:ubiquinone oxidoreductase subunit N [Agrobacterium albertimagni AOL15]
(481 aa)

Score: 282 bits (722), Expect: 2.60327e-73
Length: 453, Idn/Pos/Gap = 150/256/25 (33%/56%/5%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIF---YSTNKYYGYPILSKNFGYLVVITFTYILFLI  63
           I+ +++  PEL L +   +LL+ G+F    S +   G  I       L++ +  +++F  
Sbjct:   7 IASLHLVTPELILAVGAMVLLMIGVFSGDRSNSVVTGLAI------ALLIFSGAWLIFAG  60

Query:  64 INTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILS 123
                F   Y    +      K++K + L+  +  + + + +   + L+ FEF +L +L+
Sbjct:  61 QEGEAFNGAYLADGY-----AKFMKILALIGSVTAMIMAVGHARYDHLDKFEFPVLLVLA 115

Query: 124 ILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLF 183
            L I L+IS  DL+++Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+
Sbjct: 116 TLGIMLMISANDLITLYMALELQSLALYVVAAINRDSLRSTEAGLKYFVLGALSSGMLLY 175

Query: 184 GIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMW 243
           G++L+YG  G T F +++    +   E S+      L+ GLVF+     FK+SA PFHMW
Sbjct: 176 GMSLVYGFTGNTGFNEIATVLSA--GEPSL-----GLIFGLVFVLAGLAFKISAVPFHMW 228

Query: 244 SPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTF 303
           +PDVYEG  T +        KI    + + +   +   +F  WQ++ +  +  S+ LG+ 
Sbjct: 229 TPDVYEGAPTPVTAFLAAAPKIGAMAILVRIVIDAFLPIFAEWQQIVVFISIASMVLGSV 288

Query: 304 IAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR 363
            A  Q   KR +AYSSI H+G+ ++ +++    G   ++ YM+IY+++ LG FA ++++R
Sbjct: 289 AAIGQRNIKRLMAYSSIGHMGYALVGLAAGTDTGVAGVLLYMLIYLVMTLGTFACIMAMR 348

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
                K    +  I +   LS T P +AF +  ++FS++GIPP+AGFF K  VF+  +++
Sbjct: 349 Q----KEGGNVENIDDLAGLSTTRPFMAFVLTALMFSLAGIPPLAGFFAKYFVFVAAIEA 404

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
            LY+L I  +  S +  +YY+RIIK+++FD   
Sbjct: 405 KLYALAIIGVLASVIGAYYYLRIIKVMWFDEAK 437

ref|YP_004222802.1| NADH dehydrogenase subunit 2 [Vigna radiata]
gb|ADO19881.1| NADH dehydrogenase subunit 2 [Vigna radiata]
(488 aa)

Score: 282 bits (721), Expect: 3.23395e-73
Length: 472, Idn/Pos/Gap = 169/264/21 (35%/55%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYL--VVITFTYILFLIINTPDFLST  72
           PE+++     ILLI+G+ +ST+K Y YP L  N G+L  + +  T +L         ++ 
Sbjct:  10 PEIFIINATSILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGIC-YVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            F +  F  ++  +   I LL+     + +   +   E+ + FEF +L  L   S+  +I
Sbjct:  70 LFRNNLFRRDNFTYFCQILLLLSTAGTISMCFDSSEQERFDAFEFIVLIPLPTRSMLFMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  D +++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG ++IYG 
Sbjct: 130 SAHDSIAMYLAIEPQSLCFYVMAASKRKSEFSTEAGSKYLILGAFSSGILLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++ I+    FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGARS-----SGIFMGILSIAVGSLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIAFAQ 308
           G+ T +     I  KI+I   F N+   S++  +    Q++   C+  S+ LG   A AQ
Sbjct: 245 GSPTPVTAFLSIAPKISI---FANISRVSIYGSYGATLQQIFCFCSIASMILGALAAMAQ 301

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           TK KR LA+SSI HVG+I    S     G  SL+  + IY L+ +  FA +L+LR  R  
Sbjct: 302 TKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTR-- 359

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                ++YI++   L+KT+PI A +  I +FS  GIPP+AGF +K  +F   L    Y L
Sbjct: 360 -----VKYIADLGALAKTNPISAITFSITMFSYVGIPPLAGFCSKFYLFFAALGCGAYFL 414

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
               +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 415 APVGVVTSVIGCFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFIT 466

gb|ABX25849.1| NADH dehydrogenase subunit 2 [Oligotrichum hercynicum]
(405 aa)

Score: 281 bits (720), Expect: 3.78951e-73
Length: 381, Idn/Pos/Gap = 156/234/28 (40%/61%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL++S  S           E LN FE  +L +LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  39 CQIFLLVSTASTIVMCLGYFKEESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQ  98

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct:  99 SLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 158

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 159 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 213

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L    +  S+ LG   A AQ K KR LAYSSI H
Sbjct: 214 PKISILANMVRVFIYSFYD--PTWQQLFFFRSIASMILGALAAMAQNKVKRLLAYSSIGH 271

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + I++L+ + +FA +L+LR       NH  +YI++   
Sbjct: 272 VGYLFIGFSCGTIEGIQSLLIGVFIHVLMTINVFAIVLALRQ------NH-FKYIADLGA 324

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 325 LAKTNPILAITSSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 384

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 385 YIRFVKIMYFDTPKKWILYKP 405

emb|CAC20162.1| NADH dehydrogenase subunit 2 [Fontinalis antipyretica]
(417 aa)

Score: 281 bits (720), Expect: 3.78951e-73
Length: 381, Idn/Pos/Gap = 155/232/28 (40%/60%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +   LS  S+  +IS +DL+++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFKEESLNAFESIVSIPLSTCSMLFMISAYDLIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAG KYFILG FS+G+L FG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGSKYFILGAFSSGILSFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG+  A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGSLAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+LR  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLALRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

ref|ZP_11122435.1| NADH:ubiquinone oxidoreductase subunit N [Thalassospira profundimaris WP0211]
gb|EKF07647.1| NADH:ubiquinone oxidoreductase subunit N [Thalassospira profundimaris WP0211]
(475 aa)

Score: 281 bits (720), Expect: 4.25906e-73
Length: 445, Idn/Pos/Gap = 154/259/28 (34%/58%/6%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE+++ ++   LL+ G+F   +K +      +    L V      + L++   D  S +
Sbjct:   8 LPEMFMAVSALALLMLGVFAGKDKSF------RTVSLLAVAAQVITIALVV-MGDGGSAF  60

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           F  F   +   K+ K + L+     + + ++    E +  FEF +L  L+ L +  ++S 
Sbjct:  61 FGQFSA-DPFAKFCKVLILIGSATGIIMAMNFAERENMARFEFPILISLATLGMMAMVSA 119

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            D+LS+Y+ LE+ +L  YV+A IRR +  STE+GLKYFILG  ++G+LL+G++++YG  G
Sbjct: 120 TDMLSLYLGLELQSLALYVVAAIRRDTVRSTESGLKYFILGSIASGILLYGMSMVYGFTG 179

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
            TNF   ++   +++      E+P   L+GL FI     FK+SA PFHMW+PDVYEG  T
Sbjct: 180 TTNF---TVLGNTLVGG----ELPLGALVGLAFIFAGLCFKVSAVPFHMWTPDVYEGAPT 232

Query: 254 SIITLFIIFTKITIFFLFINL----FGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQT 309
            + + F +  KI    LFI +    FG ++ +    WQ++ ++ +  S+ +G+F A  Q 
Sbjct: 233 PVTSFFAVAPKIAGLALFIRVAVGPFGGAVED----WQQIIVLISILSMAVGSFAALRQE 288

Query: 310 KFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYK 369
             KR +AYSSI HVGF ++ +++    G   ++ Y+ IY+++NLG FA +L +R  RN +
Sbjct: 289 NIKRLMAYSSIGHVGFALVGLAAGTQEGVTGVLVYLGIYLVMNLGTFAVILCMR--RNDR 346

Query: 370 FNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLV 429
            N +   I++   L+KT P++A    I +FS++GIPP+AGFF K  VF   + + L +L 
Sbjct: 347 MNEE---ITDLAGLAKTKPLMAAITAIFMFSMAGIPPLAGFFGKFYVFKAAVDAGLVTLA 403

Query: 430 IFAITISCLATFYYIRIIKIIYFDN 454
           +  +  S ++ +YY+RIIK++YFD 
Sbjct: 404 VIGLVTSVVSAYYYLRIIKVMYFDE 428

ref|YP_173350.1| NADH dehydrogenase subunit 2 [Nicotiana tabacum]
(488 aa)

Score: 281 bits (720), Expect: 4.5912e-73
Length: 482, Idn/Pos/Gap = 169/270/27 (35%/56%/5%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLK------WIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            +  F+NN  +      + + + LL     + +  ++   E+ + FE  +L  L    + 
Sbjct:  68 -AHLFWNNLFRRDNFTYFCQILLLLSTAGTISMCFNSFEQERFDAFESIVLIPLPTRGML 126

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
            +IS +D +++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG F +G+LLFG ++I
Sbjct: 127 FMISAYDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGILLFGCSMI 186

Query: 189 YGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           YG  G T+F  L+  L    I   +S     + + +G++FI+    FK++A PFHMW+PD
Sbjct: 187 YGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGSLFKITAVPFHMWAPD 241

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIA 305
           +YEG+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A
Sbjct: 242 IYEGSPTPVTAFLSIAPKISIS---ANISRVSIYGSYGATLQQIFFFCSIASMILGALAA 298

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
            AQTK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA +L+LR  
Sbjct: 299 MAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYASMTIDAFAIVLALRQT 358

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R       ++YI++   L+KT+PI+A +  I +FS +GIPP+AGF +K  +F   L    
Sbjct: 359 R-------VKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGA 411

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLN 485
           Y L    +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T F   
Sbjct: 412 YFLAPVGVVTSVIGRFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPY 471

Query: 486 PN 487
           P+
Sbjct: 472 PS 473

emb|CAM77663.1| NADH dehydrogenase subunit 2 [Magnetospirillum gryphiswaldense MSR-1]
(486 aa)

Score: 281 bits (719), Expect: 5.16009e-73
Length: 488, Idn/Pos/Gap = 157/268/24 (32%/54%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
           D+   +PEL + L    LL+ G+F           L+     LV++    + + +  +  
Sbjct:   6 DLIPVLPELLVVLAAMALLMLGVFRKGEGTASTTTLA----VLVLVGAMLLTWAVGGSER  61

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  F   F  +    + K + L        + ++ +  EKL  FE+ +L +L+ + + 
Sbjct:  62 TLT--FGGLFVLDPFSVFTKVLLLAASAITAAMSLNFLEKEKLGRFEYPILILLATVGMM 119

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           +++S  D L++Y+ LE+ +L  YVLA   R S  +TE+GLKY++LG  ++G+LL+GI+L+
Sbjct: 120 MMVSANDFLALYLGLEIQSLSLYVLAAYHRDSAKATESGLKYYVLGSLASGMLLYGISLV 179

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F  L+  F         L      + GLVF+     FK+SAAPFHMW+PDVY
Sbjct: 180 YGFSGTTSFDGLAKLFGGDHAVHPHL----GFVAGLVFVLAGLAFKISAAPFHMWTPDVY 235

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T + + F +  KI    L + +      EL + W+++    A  S+F+G+F A AQ
Sbjct: 236 EGAPTPVTSFFAVAPKIAAMALLVRVMTGPFGELSDQWRQVIAFIALGSMFIGSFAAIAQ 295

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI HVGF+++ +++ + +G   ++ Y+ IY+ +N+G+FA +LS+R     
Sbjct: 296 NNIKRLMAYSSIGHVGFMLVGIAAGSADGIQGVLIYLAIYLSMNVGVFAVILSMR----- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           +    +  + +   L KT+P +A ++ +++FS++GIPP+AGF  K  VF   + + LY+L
Sbjct: 351 QKGRMVEGVDDLAGLGKTNPAMAAAMAVLMFSMAGIPPMAGFIGKFYVFKAAVDAGLYTL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSK----AFVLSFSVLLLTFFCL 484
            I  +  S ++ +YY+RIIK++YFD          MD+S       VL+ + ++   F  
Sbjct: 411 AIIGVVTSVVSAYYYLRIIKVMYFDEA-----VESMDRSGSKALGLVLAAATIVNIVFIA 465

Query: 485 NPNLIINS 492
            P  ++NS
Sbjct: 466 IPGPLLNS 473

ref|YP_001638547.1| proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium extorquens PA1]
ref|YP_002420017.1| proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium chloromethanicum CM4]
ref|YP_002962040.1| NADH-quinone oxidoreductase subunit N [Methylobacterium extorquens AM1]
ref|YP_003067135.1| NADH-quinone oxidoreductase subunit N [Methylobacterium extorquens DM4]
ref|ZP_12696612.1| NAD(P)H-quinone oxidoreductase subunit 2 [Methylobacterium extorquens DSM 13060]
gb|ABY29476.1| proton-translocating NADH-quinone oxidoreductase, chain N [Methylobacterium extorquens PA1]
gb|ACK82089.1| proton-translocating NADH-quinone oxidoreductase, chain N [Methylobacterium chloromethanicum CM4]
gb|ACS38763.1| NADH-quinone oxidoreductase chain N (NADH dehydrogenase I, chain N) [Methylobacterium extorquens AM1]
emb|CAX23150.1| NADH-quinone oxidoreductase chain N (NADH dehydrogenase I, chain N) [Methylobacterium extorquens DM4]
gb|EHP93748.1| NAD(P)H-quinone oxidoreductase subunit 2 [Methylobacterium extorquens DSM 13060]
(479 aa)

Score: 280 bits (717), Expect: 8.80179e-73
Length: 482, Idn/Pos/Gap = 157/271/29 (32%/56%/6%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE+ L++   +L++YG +       G      N G L+++ FT+  FL+++    ++T 
Sbjct:  15 LPEIILSVGALLLVLYGAWRGERSSEGV-----NVGALILLIFTF--FLVVSQSGSVTTL  67

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISN-ISLEKLNVFEFFLLFILSILSIFLIIS 132
             +  F  +    I    +L+G     L+  +    E+++ FE+ +L +L  + + ++ S
Sbjct:  68 --NGAFIADPFARIMKALILIGSAATILLSRDYFQRERIDRFEYPILIVLCTVGMLVMAS 125

Query: 133 TFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCI 192
             DL+S+Y+ LE+ +L  YV+A   R    STEAGLKYF+LG  S+G+LL+G +L+YG  
Sbjct: 126 ANDLISLYLGLELQSLAAYVIAAFHRDDVKSTEAGLKYFVLGALSSGMLLYGASLVYGFT 185

Query: 193 GITNFIDLSLFFQSIMKEKSILEIPT--DLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
           G  +F  +           + L+ P+   ++LG+VF++    FKL+A PFHMW+PDVYEG
Sbjct: 186 GTVSFPGIV----------TALDGPSSFGIVLGIVFVAAGVAFKLAAVPFHMWTPDVYEG 235

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
           + T +   F    KI    + + +F  +  ++  VWQ++ +  +  S+ LG+F A  Q  
Sbjct: 236 SPTPVTAFFGSAPKIAAMAMTVRVFIGAFPDVTAVWQQIIIFVSIASMALGSFAAIGQRN 295

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI +VG+ +I +++ +  G   ++ YM+IY+ + LG FA LLS+R     + 
Sbjct: 296 IKRLMAYSSIGNVGYALIGLAAGSEEGIRGVVIYMIIYLAMTLGAFAVLLSMR-----RK 350

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +     I + + LS+THP +AF +  ++FS++GIPP+AGFF K  VF   +K+ L +L +
Sbjct: 351 DQMFETIDDLSGLSRTHPWLAFCLAAMMFSLAGIPPLAGFFAKFYVFAAAIKAGLVTLAV 410

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLII 490
             +  S +  FYY+R++K++YFD        +P     A VL  S  ++  F L P  ++
Sbjct: 411 VGVVTSVVGAFYYLRLVKVMYFDEAKAPYERIP--PGSAIVLGVSSAVVVLFFLVPAPLV 468

Query: 491 NS 492
            +
Sbjct: 469 AA 470

ref|ZP_08869198.1| NADH dehydrogenase subunit N [Azospirillum amazonense Y2]
gb|EGY01211.1| NADH dehydrogenase subunit N [Azospirillum amazonense Y2]
(479 aa)

Score: 280 bits (716), Expect: 1.19852e-72
Length: 464, Idn/Pos/Gap = 150/263/27 (32%/56%/5%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           ++D+   +PE++L +    LL+ G+F   N   G  ++S     L V+       L+   
Sbjct:   5 LTDLIPALPEIFLAVAALALLMLGVFSGKN---GTRLVSG----LSVVALVATSVLLFRQ  57

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISN-ISLEKLNVFEFFLLFILSIL 125
             +   +  S  F  +       + +L+G     ++  N I+ E ++ FE+ +L +L+ +
Sbjct:  58 EGYDVAF--SGLFITDGFAVFSKLLVLLGTGLSIIIAQNFIAREDMDRFEYPVLMLLATV 115

Query: 126 SIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGI 185
            + +++S  DLL++Y+ LE+ +L  YV+A  RR S  STEAGLKYF+LG  S+G+LL+GI
Sbjct: 116 GMMMMVSANDLLTLYVGLELQSLSLYVIAAFRRDSAKSTEAGLKYFVLGALSSGMLLYGI 175

Query: 186 ALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +LIYG  G TNFI ++   Q+      ++       +GLVF++    FK+SA PFHMW+P
Sbjct: 176 SLIYGFAGTTNFITIAQVLQAGPASLGVI-------VGLVFVAAGLAFKISAVPFHMWTP 228

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIA 305
           DVYEG  T +   F +  K+    LFI +       L   W+++   C+  S+ +G+  A
Sbjct: 229 DVYEGAPTPVTAFFAVAPKVAAICLFIRVLEGPFGSLLPQWRQVIEFCSVASMVVGSLAA 288

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
             Q+  KR +AYSSI ++G+ ++ V++    G  +++ YM IY+++ +G FA ++ +R  
Sbjct: 289 IRQSNIKRLMAYSSIANIGYALVGVAAGTAEGVQAVLIYMAIYLVMTVGTFAIIIGMR-- 346

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
              +    +  I++   LSKT+P++A ++ + +FS++G+PP AGFF KL+VF+   K+ L
Sbjct: 347 ---QKGKAVEEIADLAGLSKTNPMLALALAVFMFSMAGVPPAAGFFGKLLVFMAAWKAGL 403

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKA 469
           Y L I     S ++ +YY+++ K+ +FD+     +  P+D+  A
Sbjct: 404 YPLSIIMALTSGISLYYYLKVCKVSWFDD-----VKEPLDRPTA 442

emb|CAC19821.1| NADH dehydrogenase subunit 2 [Aulacomnium androgynum]
(417 aa)

Score: 280 bits (716), Expect: 1.32474e-72
Length: 381, Idn/Pos/Gap = 153/231/28 (40%/60%/7%)

Query:  97 CYVFLVISNISL----------EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL+IS  S           E LN FE  +L + S  S+  +IS +D +++Y+++E+ 
Sbjct:  51 CQIFLLISTASTIVMCLGYFKEESLNAFESIVLILPSTCSMLFMISAYDPIAMYLAIELQ 110

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKY ILG FS+G+LLFG ++IYG  G+TNF +L+  F  
Sbjct: 111 SLCFYVIAASKRDSEFSTEAGLKYSILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTG 170

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I 
Sbjct: 171 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIA 225

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L   C+  S+ LG   A AQ K KR LAYSSI H
Sbjct: 226 PKISILANMVRVFIYSFYD--PTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGH 283

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+  + IY+L+ + +FA +L+ R  R        +YI++   
Sbjct: 284 VGYLFIGFSCGTIEGIQSLLIGVFIYVLMTINVFAIVLASRQNR-------FKYIADLGA 336

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ + +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 337 LAKTNPILAITLSVTMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 396

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 397 YIRFVKIMYFDTPKKWILYKP 417

ref|YP_001414476.1| proton-translocating NADH-quinone oxidoreductase subunit N [Parvibaculum lavamentivorans DS-1]
sp|A7HY36.1|NUON_PARL1 RecName: Full=NADH-quinone oxidoreductase subunit N; AltName: Full=NADH dehydrogenase I subunit N; AltName: Full=NDH-1 subunit N
gb|ABS64819.1| proton-translocating NADH-quinone oxidoreductase, chain N [Parvibaculum lavamentivorans DS-1]
(483 aa)

Score: 280 bits (715), Expect: 1.55231e-72
Length: 477, Idn/Pos/Gap = 157/262/20 (32%/54%/4%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE+ L +    LL+YG+F              + G L +       FLII    ++ T 
Sbjct:  15 LPEILLAVGAMALLMYGVFRKDCDAR-----ETSLGALALFALVGA-FLIIEPNAYVET-  67

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           F   F  +   K++K + LL     + + ++ I  E ++ FE+ +L IL+ L +F+++S 
Sbjct:  68 FGGMFVIDGFTKFMKLLILLAAAAAIVMSLTFIRREGMDRFEYPVLIILATLGMFMMVSA 127

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
             L+S+Y+ LE+ +L  YV+A   R +  +TEAGLKYF+LG  ++G+LL+G +LIYG  G
Sbjct: 128 NGLISLYMGLELQSLSLYVIAAFHRDNTRATEAGLKYFVLGALASGMLLYGASLIYGFTG 187

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
              F  ++   Q+      ++        G+VF+     FK+SA PFHMW+PDVYEG  T
Sbjct: 188 SVQFGSIATVLQADGTNIGVI-------FGIVFVLAGLAFKISAVPFHMWTPDVYEGAPT 240

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F    K+    L + +   +   + + WQ++ +  A  S+ LG F A  Q+  KR
Sbjct: 241 PVTAFFAGAPKVAAMALILRVLFVAFPSMESEWQQIIVFIAIASMVLGAFAAIGQSNIKR 300

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYSSI+H+GF M+ +++    G   ++ Y++IY+++N G+F  +L+++    Y  N  
Sbjct: 301 LMAYSSISHMGFAMVGLAAGTPEGVRGVLIYLVIYVVMNAGVFCCILAMQRKEGYVEN-- 358

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
              IS+   LS+  P++AF + +++FS++G+PP+AGFF K  VF+  +++ LY L +  +
Sbjct: 359 ---ISDLAGLSRNQPMVAFMMAMLMFSLAGVPPLAGFFGKFYVFMAAVEAGLYPLAVIGV 415

Query: 434 TISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLII 490
             S +  FYY+RI+KI+YFD      I  PM      VL  S +   FF + P  +I
Sbjct: 416 LASVVGAFYYLRIVKIMYFDEAAEPFIQ-PMPGELTAVLGISGVFTLFFFVYPAPLI 471

gb|AEK01280.1| nad2 [Arabidopsis thaliana]
(500 aa)

Score: 280 bits (715), Expect: 1.632e-72
Length: 480, Idn/Pos/Gap = 170/271/22 (35%/56%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++     ILLI+G+ +ST+K Y YP L+ N G+L +++    L L+        ++ 
Sbjct:  21 PEIFIINATSILLIHGVVFSTSKKYDYPPLASNVGWLGLLSVLITLLLLAAGAPLLTIAH  80

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGIC-YVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            F +  F  ++  +   IFLL+     + +   +   E+ + FEF +L  L    +  +I
Sbjct:  81 LFWNNLFRRDNFTYFCQIFLLLSTAGTISMCFDSSDQERFDAFEFIVLIPLPTRGMLFMI 140

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  DL+++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG FS+G+LLFG ++IYG 
Sbjct: 141 SAHDLIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFSSGILLFGCSMIYGS 200

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFH-MWSPDVY 248
            G T+F  L+  L    I   +S     + + +G++ I+  F FK++A PF  MW+PD+Y
Sbjct: 201 TGATHFDQLAKILTGYEITGARS-----SGIFMGILSIAVGFLFKITAVPFRYMWAPDIY 255

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIAFA 307
           EG+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A A
Sbjct: 256 EGSPTPVTAFLSIAPKISIS---ANILRVSIYGSYGATLQQIFFFCSIASMILGALAAMA 312

Query: 308 QTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRN 367
           QTK KR LA+SSI HVG+I    S     G  SL+  + IY L+ +  FA + +LR  R 
Sbjct: 313 QTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVSALRQTR- 371

Query: 368 YKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYS 427
                 ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    Y 
Sbjct: 372 ------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYF 425

Query: 428 LVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPN 487
           L    +  S +  FYYIR++K ++FD    W++Y PMD++K+ +L+ +   +T   L P+
Sbjct: 426 LAPVGVVTSVIGRFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSFFITSSLLYPS 485

ref|ZP_11128787.1| NADH:ubiquinone oxidoreductase subunit N [Oceanibaculum indicum P24]
gb|EKE77717.1| NADH:ubiquinone oxidoreductase subunit N [Oceanibaculum indicum P24]
(481 aa)

Score: 280 bits (715), Expect: 1.74466e-72
Length: 483, Idn/Pos/Gap = 167/273/27 (34%/56%/5%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITF--TYILFLIINTPDFLS  71
           IPE++L      LL+ G+F             ++  +L V +F  T +L  I        
Sbjct:  11 IPEIFLACAGMALLLLGVFQGNRSL-------RSLSWLTVASFAVTAVLLYIFAGWGGKV  63

Query:  72 TYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNV--FEFFLLFILSILSIFL 129
             F   F   +S      +F+L+G   V +++S   LE+ N   FE+ ++ + + + + +
Sbjct:  64 IAFEGMFV-ADSFALFAKLFILLG-SAVAVILSMDYLERENAARFEYPVVILFATVGMMM 121

Query: 130 IISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIY 189
           ++S  +L+S+Y+ LE+ +L  Y+ A  RR S  STEAGLKYF+LG  S+G+LL+G ++IY
Sbjct: 122 MVSANNLMSLYVGLELQSLSLYIAAAFRRDSLRSTEAGLKYFVLGALSSGMLLYGSSMIY 181

Query: 190 GCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
           G  G T+F  L+   Q++  E S+      L++G+VF+S    FK+SA PFHMW+PDVYE
Sbjct: 182 GFTGSTDFAVLA---QALGGEPSV-----GLIVGIVFLSAGLAFKVSAVPFHMWTPDVYE 233

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQT 309
           G  T +  LF    K     LF  +      E+ + WQ++ ++ +  S+ LG   A  QT
Sbjct: 234 GAPTPVTALFASAPKFAAIALFCRVMVEPFGEIASQWQQIIVLISIGSMVLGALAAIMQT 293

Query: 310 KFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYK 369
             KR +AYSSI H+G+ ++ +++ +  G   ++ YM IY+++N+G FA +L +R     +
Sbjct: 294 NIKRLMAYSSIGHMGYALVGLAAGSEVGVRGVLIYMAIYLVMNVGTFAVILCMR-----Q 348

Query: 370 FNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLV 429
               +  IS+   LS+THP++A ++ I +FS++GIPP+AGFF KL VFL  +++ LY L 
Sbjct: 349 QGRLVENISDLAGLSRTHPMMAVALTIFMFSMAGIPPLAGFFGKLYVFLAAIEAGLYILA 408

Query: 430 IFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLI 489
           +  +  S +  FYY+RI+K++YFD   V  +  P+ +    V++ S L    F L P  I
Sbjct: 409 VIGVVSSVVGAFYYLRIVKVMYFDE-PVEELDSPVRRELGTVIAVSGLFTLLFFLWPAPI 467

Query: 490 INS 492
           +N 
Sbjct: 468 LNG 470

ref|YP_003412119.1| NADH dehydrogenase subunit 2 (mitochondrion) [Phaeoceros laevis]
gb|ACT75327.1| NADH dehydrogenase subunit 2 [Phaeoceros laevis]
(487 aa)

Score: 280 bits (715), Expect: 1.74466e-72
Length: 469, Idn/Pos/Gap = 175/266/29 (37%/56%/6%)

Query:  28 IYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYFPSFFFFNN----S  83
           IYG+ +ST+K Y YP L  N G+L + +   I  L++     ++       F+NN    +
Sbjct:  24 IYGVVFSTSKRYDYPPLVCNVGWLGLPS-VLITILLVAAGALVAN-----LFYNNLIIDN  77

Query:  84 LKWIKTIFL-LVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYIS 142
             + + IF  L     +   +     E LN  EF +L +LSI S+F +I  +DL++ Y +
Sbjct:  78 FTYFRQIFPSLSTASTIPTCLDYFKEESLNAPEFIILILLSICSMFFMILAYDLIATYSA 137

Query: 143 LEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSL 202
           +E  +L FYV+A  +R SEFSTEAGLKYFILG F +G+LLFG  +IYG  G+TNF +L+ 
Sbjct: 138 IEPQSLCFYVIAASKRDSEFSTEAGLKYFILGAFPSGILLFGCFMIYGFTGVTNFEELAK 197

Query: 203 FFQ----SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITL 258
            F     ++   +S     + + +G+ FI+  F FK++A  FHMW+PDVYEG+ T +   
Sbjct: 198 IFTGYEITLFGAQS-----SGIFMGIPFIAVGFLFKITAVSFHMWAPDVYEGSPTLVTAF 252

Query: 259 FIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYS 318
           F I  KI+I    + +F  S ++    WQ+L   C+   + LG   A AQ K KR LAYS
Sbjct: 253 FSIAPKISILANMLRVFIYSFYD--PTWQQLFFFCSIAFMILGALAAMAQNKVKRLLAYS 310

Query: 319 SINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYIS 378
           SI HVG++ I  S     G  SL+  M IY+L+ + +  ++L+LR        ++++YI+
Sbjct: 311 SIGHVGYLPIGFSRGTIEGIQSLLIAMFIYVLMTINVSVTVLALR-------KNRLKYIA 363

Query: 379 EFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCL 438
           +   L+KT+ I+A ++ I +   +GI  +AGF +K  +F   L    YSL    I  S  
Sbjct: 364 DLGALAKTNRILAITLSITMSPYAGILLLAGFCSKFYLFFAALGCGAYSLAFVGIVTSVT 423

Query: 439 ATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPN 487
           + FYYIR +KI+YFD    W+IY PMD+ K  +L+ ++   T F L P+
Sbjct: 424 SRFYYIRFVKIMYFDTPETWIIYKPMDREKLLLLAITLFSTTSFFLYPS 472

ref|ZP_11264071.1| NADH-quinone oxidoreductase subunit N [Rhizobium mesoamericanum STM3625]
emb|CCM75225.1| NADH-quinone oxidoreductase subunit N [Rhizobium mesoamericanum STM3625]
(481 aa)

Score: 280 bits (715), Expect: 1.75927e-72
Length: 450, Idn/Pos/Gap = 152/258/18 (33%/57%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           ++ +++ IPEL L +    LL+ G+F          IL+      +++     L+LI   
Sbjct:   7 LASLHLSIPELILAVGALALLMIGVFSGERSGRMVSILA------MIVLAAAALWLIFVP  60

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            + +   +   F  +   +++K   L+  I  +F+ +      +L+ FEF +L +L  L 
Sbjct:  61 SEGVG--YGGVFLSDGFGRFMKITALVGSISALFMSVGLAKENQLDKFEFPVLLVLCTLG 118

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           I L+IS  DL+S+Y+ LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++
Sbjct: 119 ILLMISANDLISLYLGLELQSLAIYVVAAINRESVRSTEAGLKYFVLGALSSGMLLYGMS 178

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G T+F D++    ++   +S+      L+ GLVFI     FK+SA PFHMW+PD
Sbjct: 179 LVYGFTGHTHFADIAQAL-TVDGARSL-----GLVFGLVFILAGIAFKISAVPFHMWTPD 232

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A 
Sbjct: 233 VYEGAPTPVTAFLASAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAI 292

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q   KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R   
Sbjct: 293 GQKNIKRLMAYSSIGHMGYALVGLAAGNQTGVSGVMLYMVIYMVMTLGSFAIIMSMRR-- 350

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             K    +  +++   LS T+P +A  + I++FS++GIPP+AGFF K  VF+  +++ LY
Sbjct: 351 --KDGTVVEEVNDLAGLSTTNPFMATVLTILMFSLAGIPPLAGFFAKYFVFVAAIEAKLY 408

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           +L I  +  S +  +YY+R+IK+++FD   
Sbjct: 409 ALAIIGVLASVVGAYYYLRVIKLMWFDEAT 438

ref|YP_398391.1| nad2 [Triticum aestivum]
emb|CAA74778.1| NADH dehydrogenase subunit 2 [Triticum aestivum]
dbj|BAE47677.1| nad2 [Triticum aestivum]
gb|ACA62624.1| nad2 [Triticum aestivum]
gb|ADE08090.1| nad2 [Triticum aestivum]
(488 aa)

Score: 279 bits (714), Expect: 2.18549e-72
Length: 477, Idn/Pos/Gap = 170/266/31 (35%/55%/6%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDF--LST  72
           PE+++    FILLI+G+ +ST+K   YP L  N G+L +++    L L+        ++ 
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLL------VGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            F + FF  ++  +   I LL      + +C+ F        E+ +  EF +L  L   S
Sbjct:  70 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFF-----EKERFDASEFIVLIPLPTRS 124

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           + L+I   DL+++Y+++E+ +L FYV+A  +R SEFSTEAG KY ILG F +G+LLFG +
Sbjct: 125 MLLMIPAHDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGILLFGCS 184

Query: 187 LIYGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           +IYG  G T+F  L+  L    I   +S     + + +G++FI+  F FK++A PFHMW+
Sbjct: 185 MIYGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGFLFKITAVPFHMWA 239

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTF 303
           PD+YEG+ T +     I  KI+I     N+   S+   +    Q++   C+  S+ LG  
Sbjct: 240 PDIYEGSPTPVTAFLSIAPKISI---SANMSRVSIVASYGGTLQQIFFFCSIASMILGAL 296

Query: 304 IAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR 363
            A AQTK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + +LR
Sbjct: 297 AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYASMTIDAFAIVPALR 356

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
             R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L  
Sbjct: 357 QTR-------VKYIADLGALAKTNPISAMTFSITMFSYAGIPPLAGFCSKFYLFFAALGC 409

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
             Y L    +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 410 GAYFLAPVGVVTSVIGRFYYIRLAKRMFFDRPRTWILYEPMDRDKSLLLAMTSSFIT 466

gb|ABY55185.1| NADH dehydrogenase subunit 2 [Bambusa oldhamii]
gb|AEK66756.1| NADH dehydrogenase subunit 2 [Ferrocalamus rimosivaginus]
(488 aa)

Score: 279 bits (713), Expect: 2.43588e-72
Length: 472, Idn/Pos/Gap = 167/265/21 (35%/56%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLST--  72
           PE+++    FILLI+G+ +ST+K   YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 -YFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            ++ +FF  +N   + + + LL     + +   +   E+ +  EF +L  L   S+ L+I
Sbjct:  70 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDSFEKERFDASEFIVLIPLPTRSMLLMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
              DL+++Y+++E+ +L FYV+A  +R SEFSTEAG KY ILG F +G+LLFG ++IYG 
Sbjct: 130 PAHDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGILLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + + +G++FI+    FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGARS-----SGIFMGILFIAVGSLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIAFAQ 308
           G+ T +     I  KI+I     N+   S+   +    Q++   C+  S+ LG   A AQ
Sbjct: 245 GSPTPVTAFLSIAPKISI---SANMSRVSIVASYGGTLQQIFFFCSIASMILGALAAMAQ 301

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           TK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + +LR  R  
Sbjct: 302 TKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYASMTIDAFAIVPALRQTR-- 359

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    Y L
Sbjct: 360 -----VKYIADLGALAKTNPISAMTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFL 414

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
               +  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T
Sbjct: 415 APVGVVTSVIGRFYYIRLAKRMFFDRPRTWILYEPMDRDKSLLLAMTSSFIT 466

ref|YP_002499320.1| proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium nodulans ORS 2060]
sp|B8IUV9.1|NUON_METNO RecName: Full=NADH-quinone oxidoreductase subunit N; AltName: Full=NADH dehydrogenase I subunit N; AltName: Full=NDH-1 subunit N
gb|ACL59017.1| proton-translocating NADH-quinone oxidoreductase, chain N [Methylobacterium nodulans ORS 2060]
(482 aa)

Score: 279 bits (713), Expect: 2.49762e-72
Length: 456, Idn/Pos/Gap = 153/250/24 (33%/54%/5%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLS-T  72
           +PEL LT+   +L++YG         G  + +       +I     LF +++ P     T
Sbjct:  15 LPELILTVGALVLILYGALRGERSTEGVTVGA-------IIVLIVALFSVVSQPLGAKIT  67

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNI-SLEKLNVFEFFLLFILSILSIFLII 131
            F   F  +   + +KT+  LVG     L+  ++ + E++  FE+ +L +LS + + ++ 
Sbjct:  68 TFNGSFIVDGFARVMKTL-TLVGSLAALLLARDLFARERIERFEYPILIVLSSIGMLIMA 126

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  DL+ +Y+ LE+ +L  YV+A+  R    STEAGLKYF+LG  S+G+LL+G +L+YG 
Sbjct: 127 SANDLIGLYLGLELQSLAAYVIASFHRDDVRSTEAGLKYFVLGALSSGMLLYGASLVYGF 186

Query: 192 IGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGT 251
            G       S+ F  I+           L+LG+VF++    FKL+A PFHMW+PDVYEG 
Sbjct: 187 TG-------SVSFPGIVTALREAHAGLGLVLGIVFVAAGVAFKLAAVPFHMWTPDVYEGA 239

Query: 252 LTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKF 311
            T +   F    K+    + + +F  +   +   WQ++ +  A  S+ LG+F A  Q   
Sbjct: 240 PTPVTAFFASAPKMAAMAMTVRVFIGAFPGVVAEWQQIIVFIAIASMALGSFAAIGQRNL 299

Query: 312 KRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFN 371
           KR +AYSSI +VG+ +I +++    G   ++ YM IY+ + LG FA +L +R     + N
Sbjct: 300 KRLMAYSSIGNVGYALIGLAAGTEEGVRGVVVYMAIYLAMTLGAFAVILGMR-----RGN 354

Query: 372 HQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIF 431
                I + + LS+THP +AF + +++FS++GIPP+AGFF K  VF   +K+ L  L + 
Sbjct: 355 RMFETIEDLSGLSRTHPWLAFCLAMMMFSLAGIPPLAGFFAKFYVFAAAIKAGLNVLAVI 414

Query: 432 AITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKS 467
            +  S +  +YY+RI+KI+YFD+      Y P+   
Sbjct: 415 GVVTSVVGAYYYVRIVKIMYFDDAQA--AYEPLAPG 448

ref|ZP_11116370.1| NADH:ubiquinone oxidoreductase subunit N [Thalassospira xiamenensis M-5 = DSM 17429]
gb|EKF13392.1| NADH:ubiquinone oxidoreductase subunit N [Thalassospira xiamenensis M-5 = DSM 17429]
(475 aa)

Score: 279 bits (713), Expect: 2.60402e-72
Length: 491, Idn/Pos/Gap = 157/274/34 (31%/55%/6%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE+++ ++   LL+ G+F   +K +      +   +L V      L L++     ++ Y
Sbjct:   8 LPEIFMAVSALALLMLGVFAGKDKAF------RTVSWLAVAAQIIALVLVVLGDGGVAFY  61

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
               F  +   K+ K + L+     + + ++    E ++ FEF +L +L+ L +  ++S 
Sbjct:  62 --GQFTADAFAKFTKVMILIGSSIGIVMAMNYAERENMSRFEFPILILLATLGMMAMVSA 119

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            D+LS+Y+ LE+ +L  YV+A IRR +  +TE+GLKYF+LG  ++G+LL+G++++YG  G
Sbjct: 120 TDMLSLYLGLELQSLALYVIAAIRRDTVRATESGLKYFVLGSIASGMLLYGMSMVYGFTG 179

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
            TNF  L     +       L + T  L+GL F+     FK+SA PFHMW+PDVYEG  T
Sbjct: 180 STNFAVLGDVISN-----GGLSVGT--LVGLAFMFAGLCFKVSAVPFHMWTPDVYEGAPT 232

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F +  KI    LF+ +           WQ++ ++ +  S+  G+F A  Q   KR
Sbjct: 233 PVTAFFAVAPKIAGLALFVRVAVGPFAGAVEDWQQIIVLVSILSMAWGSFAALRQDNIKR 292

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYSSI HVGF ++ +++    G   ++ Y+ IY+++NLG FA +LS+R  RN   +  
Sbjct: 293 LMAYSSIGHVGFALVGLAAGTAEGVQGILVYLGIYLVMNLGTFAVILSMR--RN---DRM 347

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
           +  I++   L+KT P++A    I++FS++GIPP+AGFF K  VF   + + L +L +  +
Sbjct: 348 VEEITDLAGLAKTKPLMAAVTAILMFSMAGIPPLAGFFGKFYVFKAAVDAGLVTLAVIGL 407

Query: 434 TISCLATFYYIRIIKIIYFDNCNVWLIYVPM---DKSKA---FVLSFSVLLLTFFCLNPN 487
             S ++ +YY+RIIK++YFD         P+   DK+      +++ + ++L  F   PN
Sbjct: 408 VTSVVSAYYYLRIIKVMYFDE--------PVEAFDKNGTEMNVIMAVATVILLAFVFFPN 459

Query: 488 LIINSIYIIST 498
            +++S  + +T
Sbjct: 460 PLMDSAGVAAT 470

ref|ZP_09876539.1| NADH-quinone oxidoreductase chain N (NADH dehydrogenase I, chain N) (NDH-1, chain N) [Phaeospirillum molischianum DSM 120]
emb|CCG41351.1| NADH-quinone oxidoreductase chain N (NADH dehydrogenase I, chain N) (NDH-1, chain N) [Phaeospirillum molischianum DSM 120]
(483 aa)

Score: 278 bits (712), Expect: 3.66618e-72
Length: 447, Idn/Pos/Gap = 151/258/19 (33%/57%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIIN-TP  67
           DI   +PEL++ L   IL++ G+F S +        ++    L ++T    + L+    P
Sbjct:   6 DILPVLPELFVALCGLILVLIGVFRSGDP-------TRPIATLSIMTMVTAMLLVWALGP  58

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
           D   T F   F  +    + K + LL  I    L I  +  EK   FE+ +L + + L +
Sbjct:  59 D-RQTGFGGLFVADRFAAFAKQLILLGSILSTALAIPFLEREKTTRFEYPVLVLFATLGM 117

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            +++S  D +S+Y+ LE+ +L  YVLA   R S  + EAG+KYF+LG  ++GLLL+GI+L
Sbjct: 118 MVMVSANDFMSLYMGLELSSLPLYVLAAFHRDSPRAAEAGVKYFVLGALASGLLLYGISL 177

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           +YG  G T+F+ L+  F+ +    ++      +++GLVF+     FK+SAAPFHMW+PDV
Sbjct: 178 LYGFSGTTSFLGLARSFEDLSGPPAV-----GIVVGLVFVVAGLAFKVSAAPFHMWTPDV 232

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFA 307
           YEG  T +   F +  KI    L   +       + + W+++ +  A  S+ +G F A  
Sbjct: 233 YEGAPTPVTAFFSVAPKIAALCLLTRVMVEPFAAMTDQWRQVVVALAVISMLVGAFAALT 292

Query: 308 QTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRN 367
           Q+  KR +AYSSI H G+I++ +++ +  G  +++ Y+ IY+ +N+ +FA +LS+R    
Sbjct: 293 QSNIKRLMAYSSIGHAGYILVGLAAGSVLGVQAILIYLTIYLFMNIAVFAVILSMR---- 348

Query: 368 YKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYS 427
            +    +  I++   LSKT+P +AF + +++FS++GIPP+AGF+ K  VF+  +++ LY 
Sbjct: 349 -RMGRHVEGIADLAGLSKTNPAMAFVMAVLMFSMAGIPPLAGFWGKFYVFMAAIEAGLYP 407

Query: 428 LVIFAITISCLATFYYIRIIKIIYFDN 454
           L +  +  S +A +YY+RI+K++YFD 
Sbjct: 408 LAVVGLVTSVVAAYYYLRIVKVMYFDE 434

ref|ZP_05082933.1| NADH-ubiquinone oxidoreductase chain n protein [Pseudovibrio sp. JE062]
gb|EEA96558.1| NADH-ubiquinone oxidoreductase chain n protein [Pseudovibrio sp. JE062]
(480 aa)

Score: 278 bits (711), Expect: 4.78818e-72
Length: 490, Idn/Pos/Gap = 154/278/24 (31%/56%/4%)

Query:   4 IINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLI  63
           ++ I D+   +PE+ L L   +LL+ G F         P+++     + V   T    ++
Sbjct:   5 LLAIPDLMPVMPEILLVLGAMVLLMVGAFGGEKST---PLVTG----ICVALLTVAGLIL  57

Query:  64 INTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICY-VFLVISNISLEKLNVFEFFLLFIL 122
           + +P + +T+  +  F  ++      + +L+G  + + + ++    +  + FE+ +L ++
Sbjct:  58 LVSPHYGTTF--NGAFIQDAFSQYMKVLVLIGSGFAIAMSVAYARSQNFDRFEYPILIVI 115

Query: 123 SILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLL 182
           + + + L++S  DL+S+Y+ +E+ +L  YV+A+I R S  STEAGLKYF+LG  S+G+LL
Sbjct: 116 ATVGMMLMLSANDLISMYLGVELQSLALYVVASINRDSVRSTEAGLKYFVLGALSSGMLL 175

Query: 183 FGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHM 242
           +G++ IYG  G T+F  ++    ++ +E++ L     L+ G+VF+     FK+SA PFHM
Sbjct: 176 YGMSFIYGFTGHTDFAGIA---AALTEERASL----GLVFGIVFMLAGIAFKISAVPFHM 228

Query: 243 WSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGT 302
           W+PDVYEG  T +   F    KI  F + I +   +L ++   WQ++ +  A  S+ LG 
Sbjct: 229 WTPDVYEGAPTPVTAFFAAAPKIAAFGMLIRVLIEALGDVTTDWQQIVVFIAIASMALGA 288

Query: 303 FIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSL 362
           F A  Q   KR +AYSSI ++G+ ++ +++    G + LI +M  Y+ + LG FA +LS+
Sbjct: 289 FAAIGQKNIKRLMAYSSIGNMGYALVGLAAGTEAGVHGLIVFMTAYLAMTLGAFACILSM 348

Query: 363 RNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLK 422
           R     +    +  IS+   LSKT+  +A  + +I+FS++G+PP+ GFF K  VF+  + 
Sbjct: 349 R-----RKEGMVEEISDLAGLSKTNLPMAVLLAVIMFSLTGLPPLIGFFGKFYVFIAAMD 403

Query: 423 SSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFF 482
           + L  LV+  +  S +A +YY+R+IK+++FD+      ++PM      VL  S  ++  F
Sbjct: 404 AGLAPLVVIGLVTSVVAAYYYLRVIKVMFFDDATGE--FLPMSGEMKIVLGLSSAVVGLF 461

Query: 483 CLNPNLIINS 492
            + P  I+N+
Sbjct: 462 FIMPEPIMNA 471

ref|YP_003550481.1| proton-translocating NADH-quinone oxidoreductase subunit N [Candidatus Puniceispirillum marinum IMCC1322]
gb|ADE38397.1| Proton-translocating NADH-quinone oxidoreductase, chain N [Candidatus Puniceispirillum marinum IMCC1322]
(483 aa)

Score: 278 bits (710), Expect: 6.46579e-72
Length: 481, Idn/Pos/Gap = 159/268/18 (33%/55%/3%)

Query:   6 NISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIIN  65
            I+DI   +PE++L     +L++   +          + S   G +V+        ++  
Sbjct:   3 EINDILPALPEMFLACVALLLVLVAAYGGDGAVNAKRVCSIALGAIVIAAV-----MLWQ  57

Query:  66 TPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSIL 125
             D  +T F   F  ++   ++K + L+     +++ IS +  + +N  EF LL +L+++
Sbjct:  58 GGDIATTAFSGMFSADSFSAYMKLLVLMGSFAALYMSISPLEQDDINKPEFSLLVLLAVV 117

Query: 126 SIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGI 185
            + L+IS  DL+S+Y+++E+ +L  YV+A +R  S  S+EAGLKYF+LG  S+G+LL+G 
Sbjct: 118 GMMLMISANDLMSLYMAVELQSLPLYVVAAMRTNSLRSSEAGLKYFLLGALSSGMLLYGA 177

Query: 186 ALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +L+YG  G T+       F  I    +   +P   ++G+VF+     FK+SAAPFHMW+P
Sbjct: 178 SLVYGFAGTTS-------FDGISAAVATGALPVVFVIGMVFMICGIAFKISAAPFHMWTP 230

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIA 305
           DVYEG+ T +  LF I  K+    L + L   +   +   W ++ +  +  S+ +G F A
Sbjct: 231 DVYEGSPTPVTALFAIAPKVAAMALMMRLTYGAFGPIAVEWSQVLVALSIASMVIGAFGA 290

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
             QT  KR +AYSSI H+G+ +  +++ ++ G   +I YM  YI +  G FA +L +R  
Sbjct: 291 IMQTDIKRMMAYSSIAHMGYALAGLAAGSHAGVLGVIIYMTGYIFMGAGTFAIILMMR-- 348

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R  K   +   I +   LSKTHP+ A  +L+++FS++GIPP+AGFF K  VFL  + + L
Sbjct: 349 REGKSATK---IDDLRGLSKTHPLFAIGLLVMMFSMAGIPPLAGFFGKWYVFLAAVNAGL 405

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWL-IYVPMDKSKAFVLSFSVLLLTFFCL 484
             L +  + +S +  FYY+RII+++YF++ +  L   +PM       +S +V+LL F  L
Sbjct: 406 IPLAVIGVVMSVVGAFYYLRIIRMMYFEDSDDPLDADLPMSNRLVLTVSLAVVLLFFAGL 465

Query: 485 N 485
            
Sbjct: 466 G 466

ref|YP_005081952.1| proton-translocating NADH-quinone oxidoreductase, chain N [Pseudovibrio sp. FO-BEG1]
gb|AEV37930.1| proton-translocating NADH-quinone oxidoreductase, chain N [Pseudovibrio sp. FO-BEG1]
(480 aa)

Score: 277 bits (709), Expect: 7.70404e-72
Length: 490, Idn/Pos/Gap = 154/278/24 (31%/56%/4%)

Query:   4 IINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLI  63
           ++ I D+   +PE+ L L   +LL+ G F         P+++     + V   T    ++
Sbjct:   5 LLAIPDLMPVMPEILLVLGAMVLLMVGAFGGEKST---PLVTG----ICVALLTVAGLIL  57

Query:  64 INTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICY-VFLVISNISLEKLNVFEFFLLFIL 122
           + +P + +T+  +  F  ++      + +L+G  + + + ++    +  + FE+ +L ++
Sbjct:  58 LVSPHYGTTF--NGAFIQDAFSQYMKVLVLIGSGFAIAMSVAYARSQNFDRFEYPILIVI 115

Query: 123 SILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLL 182
           + + + L++S  DL+S+Y+ +E+ +L  YV+A+I R S  STEAGLKYF+LG  S+G+LL
Sbjct: 116 ATVGMMLMLSANDLISMYLGVELQSLALYVVASINRDSVRSTEAGLKYFVLGALSSGMLL 175

Query: 183 FGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHM 242
           +G++ IYG  G T+F  ++    ++ +E++ L     L+ G+VF+     FK+SA PFHM
Sbjct: 176 YGMSFIYGFTGHTDFAGIA---AALTEERASL----GLVFGIVFMLAGIAFKISAVPFHM 228

Query: 243 WSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGT 302
           W+PDVYEG  T +   F    KI  F + I +   +L ++   WQ++ +  A  S+ LG 
Sbjct: 229 WTPDVYEGAPTPVTAFFAAAPKIAAFGMLIRVLIEALGDVTTDWQQIIVFIAIASMALGA 288

Query: 303 FIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSL 362
           F A  Q   KR +AYSSI ++G+ ++ +++    G + LI +M  Y+ + LG FA +LS+
Sbjct: 289 FAAIGQKNIKRLMAYSSIGNMGYALVGLAAGTEAGVHGLIVFMTAYLAMTLGAFACILSM 348

Query: 363 RNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLK 422
           R     +    +  IS+   LSKT+  +A  + +I+FS++G+PP+ GFF K  VF+  + 
Sbjct: 349 R-----RKEGMVEEISDLAGLSKTNLPMAVLLAVIMFSLTGLPPLIGFFGKFYVFIAAMD 403

Query: 423 SSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFF 482
           + L  LV+  +  S +A +YY+R+IK+++FD+      ++PM      VL  S  ++  F
Sbjct: 404 AGLAPLVVIGLVTSVVAAYYYLRVIKVMFFDDATGE--FLPMSGEMKIVLGLSSAVVGLF 461

Query: 483 CLNPNLIINS 492
            + P  I+N+
Sbjct: 462 FIMPEPIMNA 471

ref|YP_004278511.1| NADH dehydrogenase I subunit N [Agrobacterium sp. H13-3]
gb|ADY64191.1| NADH dehydrogenase I chain N [Agrobacterium sp. H13-3]
(480 aa)

Score: 277 bits (708), Expect: 9.33388e-72
Length: 459, Idn/Pos/Gap = 157/255/25 (34%/55%/5%)

Query:   1 MVIIINISDIYIFIPELYLTLTVFILLIYGIF---YSTNKYYGYPILSKNFGYLVVITFT  57
           M   I ++ ++I  PEL L +    LL+ G+F    ST    G  +       L+++   
Sbjct:   1 MTAEILLASLHIATPELILAVGALALLMIGVFSGDKSTTTVMGLSV------ALLLVVGL  54

Query:  58 YILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFF 117
           +I+F   +   F   Y    F       ++K + L+  I  + L +     E +  FE+ 
Sbjct:  55 WIVFAPASGVAFGGVYVADAFG-----NFMKVLALIGSITAMILSVGQSRFEPVGRFEYP 109

Query: 118 LLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFS 177
           +L +L+ L I L+IS  +L+S+Y++LE+ +L  YV+  I R S  STEAGLKYF+LG  S
Sbjct: 110 VLLVLATLGILLMISANNLISLYMALELQSLALYVVCAINRESLRSTEAGLKYFVLGALS 169

Query: 178 TGLLLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSA 237
           +G+LL+G++L+YG  G T F +++   Q +  E   L     L+ GLVF+     FK+SA
Sbjct: 170 SGMLLYGMSLVYGFTGNTGFTEIA---QVLTAETRSL----GLVFGLVFVLAGLAFKISA 222

Query: 238 APFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFS 297
            PFHMW+PDVYEG  T +        KI    +F+ +   +   +F  WQ++ +  +  S
Sbjct: 223 VPFHMWTPDVYEGAPTPVTAFLSAAPKIGAMAIFVRIVVDAFQPVFADWQQIVVFISIAS 282

Query: 298 LFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFA 357
           + LG+F A  Q   KR +AYSSI H+G+ ++ +++    G   +I YM IY+++ LG FA
Sbjct: 283 MLLGSFAAIGQKNIKRLMAYSSIGHMGYALVGLAAGTEAGISGVILYMTIYMVMTLGTFA 342

Query: 358 SLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVF 417
            +LS+R     K    +  + +   LS T+P +A  + I++FS++GIPP+AGFF K  VF
Sbjct: 343 CILSMRR----KEIGNVENVEDLGGLSSTNPFMAVVLTILMFSLAGIPPLAGFFGKYYVF 398

Query: 418 LTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           L  +++ LY L +  +  S +  +YYIR++K+++FD   
Sbjct: 399 LAAIEAKLYPLAVIGVIGSVVGAYYYIRVVKVMWFDEAK 437

ref|YP_006398633.1| NADH-quinone oxidoreductase subunit N [Sinorhizobium fredii USDA 257]
gb|AFL51876.1| NADH-quinone oxidoreductase subunit N [Sinorhizobium fredii USDA 257]
(482 aa)

Score: 276 bits (707), Expect: 1.20891e-71
Length: 449, Idn/Pos/Gap = 153/262/19 (34%/58%/4%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           + + + +PEL L +   +LL+ G+ YS  +    P+++   G  V +     L+LI+NT 
Sbjct:  10 ASLQLSVPELILAVGALVLLMVGV-YSNER--ATPVVT---GLSVAVLVVAGLWLILNTD  63

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
           +     +   F  +   K++K + L+  +  + + I      +++ FEF +L +L+ L +
Sbjct:  64 N--GEAYAGAFLSDPFAKFMKVLALIGSVTVMVMTIGQARAAQIDRFEFPVLLLLATLGM 121

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS  DL+S+Y+SLE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L
Sbjct: 122 LLMISANDLISLYLSLELQSLALYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGMSL 181

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           +YG  G T F +++    ++  E   L     L+ GLVFI     FK+SA PFHMW+PDV
Sbjct: 182 VYGFTGHTGFDEIA---GALTAEGRSL----GLVFGLVFILAGLAFKISAVPFHMWTPDV 234

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFA 307
           YEG  T +   F    K+    + + +   +   +   W+++ +  +  S+ LG+F A  
Sbjct: 235 YEGAPTPVTAFFAAAPKVAAMAMLVRIVIEAFEPVVADWRQIIVFISIASMLLGSFAAIG 294

Query: 308 QTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRN 367
           Q   KR +AYSSI H+G+ ++ +++ +  G   +I YM+IY+++ LG FA +L++R    
Sbjct: 295 QRNIKRLMAYSSIGHMGYALVGLAAGSMAGVRGVILYMVIYMVMTLGTFACILAMRR--- 351

Query: 368 YKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYS 427
            +    +  I +   LS+T+P +A  + I++FS++GIPP+AGFF K  VF+  +++ LY 
Sbjct: 352 -RDGEHVEGIDDLAGLSQTNPFMATVLTILMFSLAGIPPLAGFFAKYFVFVAAIEAQLYG 410

Query: 428 LVIFAITISCLATFYYIRIIKIIYFDNCN 456
           L I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 LAIIGVLASVVGAYYYLRVIKVMWFDEAK 439

ref|ZP_12980119.1| NADH:ubiquinone oxidoreductase subunit N [Agrobacterium tumefaciens 5A]
gb|EHJ99616.1| NADH:ubiquinone oxidoreductase subunit N [Agrobacterium tumefaciens 5A]
(480 aa)

Score: 276 bits (707), Expect: 1.22926e-71
Length: 452, Idn/Pos/Gap = 155/252/25 (34%/55%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIF---YSTNKYYGYPILSKNFGYLVVITFTYILFLII  64
           + ++I  PEL L +    LL+ G+F    ST    G  +       L+++   +I+F   
Sbjct:   8 ASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLSV------ALLLVVGLWIVFAPA  61

Query:  65 NTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSI 124
           +   F   Y    F       ++K + L+  I  + L +     E +  FE+ +L +L+ 
Sbjct:  62 SGVAFGGVYVADAFG-----NFMKVLALIGSITAMILSVGQSRFEPVGRFEYPVLLVLAT 116

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           L I L+IS  +L+S+Y++LE+ +L  YV+  I R S  STEAGLKYF+LG  S+G+LL+G
Sbjct: 117 LGILLMISANNLISLYMALELQSLALYVVCAINRESLRSTEAGLKYFVLGALSSGMLLYG 176

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           ++L+YG  G T F +++   Q +  E   L     L+ GLVF+     FK+SA PFHMW+
Sbjct: 177 MSLVYGFTGNTGFTEIA---QVLTAETRSL----GLVFGLVFVLAGLAFKISAVPFHMWT 229

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +        KI    +F+ +   +   +F  WQ++ +  +  S+ LG+F 
Sbjct: 230 PDVYEGAPTPVTAFLSAAPKIGAMAIFVRIVVDAFQPVFADWQQIVVFISIASMLLGSFA 289

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  Q   KR +AYSSI H+G+ ++ +++    G   +I YM IY+++ LG FA +LS+R 
Sbjct: 290 AIGQKNIKRLMAYSSIGHMGYALVGLAAGTEAGISGVILYMTIYMVMTLGTFACILSMRR 349

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
               K    +  + +   LS T+P +A  + I++FS++GIPP+AGFF K  VFL  +++ 
Sbjct: 350 ----KEIGNVENVEDLAGLSSTNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLAAIEAK 405

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           LY L +  +  S +  +YYIR++K+++FD   
Sbjct: 406 LYPLAVIGVIGSVVGAYYYIRVVKVMWFDEAK 437

ref|YP_001923717.1| proton-translocating NADH-quinone oxidoreductase, chain N [Methylobacterium populi BJ001]
gb|ACB79182.1| proton-translocating NADH-quinone oxidoreductase, chain N [Methylobacterium populi BJ001]
(479 aa)

Score: 276 bits (707), Expect: 1.26041e-71
Length: 481, Idn/Pos/Gap = 156/269/27 (32%/55%/5%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE+ L++   +L++YG +       G      N G L+++ FT+  FL+++    ++T 
Sbjct:  15 LPEIVLSIGALLLVLYGAWRGERSSEGV-----NVGALILLIFTF--FLVVSQTGNVTT-  66

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
               F  +   + +K + L+     + L       E+++ FE+ +L +L  + + ++ S 
Sbjct:  67 LNGAFIADPFARVMKALILIGSAATILLSRDYFQRERIDRFEYPILIVLCTIGMLVMASA 126

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            DL+S+Y+ LE+ +L  YV+A   R    STEAGLKYF+LG  S+G+LL+G +L+YG  G
Sbjct: 127 NDLISLYLGLELQSLAAYVIAAFHRDDVKSTEAGLKYFVLGALSSGMLLYGASLVYGFTG 186

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPT--DLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGT 251
             +F  +           + L  PT   ++LG+VF++    FKL+A PFHMW+PDVYEG+
Sbjct: 187 TVSFPGIV----------TALNGPTSFGIVLGIVFVAAGVAFKLAAVPFHMWTPDVYEGS 236

Query: 252 LTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKF 311
            T +   F    K+    + + +F  +  ++  VWQ++ +  +  S+ LG+F A  Q   
Sbjct: 237 PTPVTAFFGSAPKVAAMAMTVRVFIGAFPDVTAVWQQIIVFISIASMALGSFAAIGQRNI 296

Query: 312 KRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFN 371
           KR +AYSSI +VG+ +I +++ +  G   ++ YM+IY+ + LG FA LLSLR     + +
Sbjct: 297 KRLMAYSSIGNVGYALIGLAAGSEEGVRGVVIYMVIYLAMTLGAFAVLLSLR-----RKD 351

Query: 372 HQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIF 431
                I + + LS+THP +AF +  ++FS++GIPP+AGFF K  VF   +++ L +L + 
Sbjct: 352 RMFETIDDLSGLSRTHPWLAFCLAAMMFSLAGIPPLAGFFAKFYVFSAAIQAGLVTLAVV 411

Query: 432 AITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLIIN 491
            +  S +  FYY+R++K++YFD        +P     A VL  S  ++  F L P  ++ 
Sbjct: 412 GVVTSVVGAFYYLRLVKVMYFDEAKAPYERIP--PGSAIVLGVSSAVVVLFFLIPAPLVA 469

Query: 492 S 492
           +
Sbjct: 470 A 470

emb|CAC50351.1| NADH dehydrogenase subunit 2 [Plagiochila asplenioides]
(417 aa)

Score: 276 bits (707), Expect: 1.26041e-71
Length: 431, Idn/Pos/Gap = 158/249/21 (36%/57%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L +N G+L +++    IL + + +P  ++    +    +N   + +   LL    
Sbjct:   2 YDYPPLVRNVGWLGLLSVLITILLVAVGSPLAVANLVYNNLIIDNFTYFCQIFLLLSTAS  61

Query:  98 YVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIR 157
            + + +     E  N FE  +L + S  S+  +IS +DL+++Y+++E+ +L FYV+A  +
Sbjct:  62 TMVMCLDYSKQESSNAFESIVLILFSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASK 121

Query: 158 RTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKSI 213
           R SEFS EAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S 
Sbjct: 122 RDSEFSAEAGLKYFILGAFSSGILLFGRSMIYGFTGVTNFEELAKIFTGYEITLFGAQS- 180

Query: 214 LEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFIN 273
               + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +     I  KI+I     N
Sbjct: 181 ----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTIVTAFSSIAPKISI---LAN 233

Query: 274 LFGTSLFELFN-VWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSS 332
           +    ++  ++  WQ+L   C+  S+ LG   A AQ K KR LAYSSI HVG+++I  S 
Sbjct: 234 MLRVLIYSFYDPTWQQLFFFCSIASMILGALAAMAQNKVKRLLAYSSIGHVGYLLIGFSC 293

Query: 333 INYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAF 392
               G  SL+    IY+ + +  FA +L+LR  R        +YI++   L+KT+PI+A 
Sbjct: 294 GTIEGIQSLLIGTFIYVSMTVNAFAMVLALRQNR-------FKYIADLGALAKTNPILAI 346

Query: 393 SILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYF 452
           +  I +F  +GIPP+AGF +K  +F   L    Y L +  +  S ++ FYYIR +KI+YF
Sbjct: 347 TPSITMFPYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYF 406

Query: 453 DNCNVWLIYVP 463
           D    W++Y P
Sbjct: 407 DTPETWILYKP 417

ref|YP_003288873.1| NADH dehydrogenase subunit 2 [Saccharina coriacea]
dbj|BAI48725.1| NADH dehydrogenase subunit 2 [Saccharina coriacea]
(496 aa)

Score: 276 bits (707), Expect: 1.27098e-71
Length: 482, Idn/Pos/Gap = 171/275/9 (35%/57%/1%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D   F+PEL+L +++ ++L++G F   +    Y  L+ +   L        L L++N P
Sbjct:   9 NDTAAFLPELFLAISILVILLHGSFLGVSAASLYTYLTPSMVRLTSTILFVSLLLVLNNP  68

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
               T + + F  +N   W K I  L  I  V +  S +   +   +EFF+  I   LS+
Sbjct:  69 VESQTLWNAIFVTDNIGTWSKAIVFLGLIFCVAISESYMFSARFRAYEFFVFVIGIGLSL 128

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS++DLLSIY+S+E L+LIFYVLA  ++ S FS EAGLKYFILG  ++   LFG +L
Sbjct: 129 CLLISSYDLLSIYLSMEFLSLIFYVLAAWKKNSYFSAEAGLKYFILGSVASIFFLFGASL 188

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           IY  +G TN   L+L  ++++     +       LGL+ + +A  FK+ AAP+HMW  DV
Sbjct: 189 IYFSMGTTNLGSLTLLTENLITSSPFIY------LGLICVVSALLFKIGAAPYHMWIADV 242

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIAF 306
           YEG  T +  +F +  K   F + + L  TS +  F ++W+    IC   SLF+G     
Sbjct: 243 YEGAPTLVGFIFAVIPKFAFFVVILRLSFTSFWSFFPSLWENFFCICGLLSLFIGCVCGL 302

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            +TK KR LA+SS+ HVGF+ + ++S N  G  +++FY+ IY++    ++  ++ L    
Sbjct: 303 GETKIKRLLAFSSVGHVGFLCLGLASGNIEGIQAVLFYLSIYMVTAAFLWVYIVHLD--L 360

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
           +      +   S+   L +++P++ F + +++FS++GIPP  GFF KL +F++ + SS Y
Sbjct: 361 SSTSGSTLLTFSDSIGLVRSNPLMGFGVALMIFSLAGIPPFGGFFAKLNIFVSLVDSSFY 420

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNP 486
            + IF +  S ++ FYYIR+IKI YF+    W  + P+ K  + VL  S L + FF L+P
Sbjct: 421 IIAIFVVITSVISAFYYIRLIKIFYFEKNKNWFFFTPLSKGASMVLVLSGLTIIFFMLSP 480

Query: 487 NL 488
           N+
Sbjct: 481 NI 482

ref|NP_354293.2| NADH ubiquinone oxidoreductase chain N [Agrobacterium fabrum str. C58]
gb|AAK87078.2| NADH ubiquinone oxidoreductase chain N [Agrobacterium fabrum str. C58]
(480 aa)

Score: 276 bits (706), Expect: 1.74516e-71
Length: 452, Idn/Pos/Gap = 154/251/25 (34%/55%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIF---YSTNKYYGYPILSKNFGYLVVITFTYILFLII  64
           + ++I  PEL L +    LL+ G+F    ST    G  +       L+++   +I+F   
Sbjct:   8 ASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLAV------ALLLVVGLWIIFAPA  61

Query:  65 NTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSI 124
           +   F   Y    F       ++K + L+  I  + L +     E +  FE+ +L +L+ 
Sbjct:  62 SGVAFGGVYIADAFG-----NFMKVLALIGSITAMILAVGQGRFEPIGRFEYPVLLVLAT 116

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           L I L+IS  +++S+Y++LE+ +L  YV+  I R S  STEAGLKYF+LG  S+G+LL+G
Sbjct: 117 LGILLMISANNMISLYMALELQSLALYVVCAINRESLRSTEAGLKYFVLGALSSGMLLYG 176

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           ++L+YG  G T F +++   Q +  E   L     L+ GLVF+     FK+SA PFHMW+
Sbjct: 177 MSLVYGFTGNTGFTEIA---QVLASETRSL----GLVFGLVFVLAGLAFKISAVPFHMWT 229

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +        KI    + + +   +   +F  WQ++ +  +  S+ LG+F 
Sbjct: 230 PDVYEGAPTPVTAFLSAAPKIGAMAILVRIVVEAFQPVFADWQQIVVFISIASMLLGSFA 289

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  Q   KR +AYSSI H+G+ ++ +++    G   +I YM IY+++ LG FA +LS+R 
Sbjct: 290 AIGQKNIKRLMAYSSIGHMGYALVGLAAGTEAGISGVILYMTIYMVMTLGTFACILSMRR 349

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
               K    +  + +   LS T+P +A  + I++FS++GIPP+AGFF K  VFL  +++ 
Sbjct: 350 ----KEIGNVENVEDLAGLSSTNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLAAIEAK 405

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           LY L I  +  S +  +YYIR++K+++FD   
Sbjct: 406 LYPLAIIGVIGSVVGAYYYIRVVKVMWFDEAK 437

ref|ZP_12505320.1| NADH dehydrogenase subunit N [Agrobacterium tumefaciens F2]
gb|EGP57296.1| NADH dehydrogenase subunit N [Agrobacterium tumefaciens F2]
(480 aa)

Score: 276 bits (705), Expect: 1.99441e-71
Length: 452, Idn/Pos/Gap = 155/252/25 (34%/55%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIF---YSTNKYYGYPILSKNFGYLVVITFTYILFLII  64
           + ++I  PEL L +    LL+ G+F    ST    G  +       L+++   +I+F   
Sbjct:   8 ASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLSV------ALLLVVGLWIVFAPA  61

Query:  65 NTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSI 124
           +   F   Y    F       ++K + L+  I  + L +     E +  FE+ +L +L+ 
Sbjct:  62 SGVAFGGVYVADAFG-----NFMKVLALIGSITAMILSVGQGRFEPVGRFEYPVLLVLAT 116

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           L I L+IS  +L+S+Y++LE+ +L  YV+  I R S  STEAGLKYF+LG  S+G+LL+G
Sbjct: 117 LGILLMISANNLISLYMALELQSLALYVVCAINRESLRSTEAGLKYFVLGALSSGMLLYG 176

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           ++L+YG  G T F +++   Q +  E   L     L+ GLVF+     FK+SA PFHMW+
Sbjct: 177 MSLVYGFTGNTGFTEIA---QVLTAETRSL----GLVFGLVFVLAGLAFKISAVPFHMWT 229

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +        KI    +F+ +   +   +F  WQ++ +  +  S+ LG+F 
Sbjct: 230 PDVYEGAPTPVTAFLSAAPKIGAMAIFVRIVIDAFQPVFADWQQIVVFISIASMLLGSFA 289

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  Q   KR +AYSSI H+G+ ++ +++    G   +I YM IY+++ LG FA +LS+R 
Sbjct: 290 AIGQKNIKRLMAYSSIGHMGYALVGLAAGTEAGVSGVILYMTIYMVMTLGTFACILSMRR 349

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
               K    +  + +   LS T+P +A  + I++FS++GIPP+AGFF K  VFL  +++ 
Sbjct: 350 ----KEIGNVETVEDLAGLSSTNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLAAIEAK 405

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           LY L +  +  S +  +YYIR++K+++FD   
Sbjct: 406 LYPLAVIGVIGSVVGAYYYIRVVKVMWFDEAK 437

ref|ZP_10587721.1| proton-translocating NADH-quinone oxidoreductase, chain N [Phyllobacterium sp. YR531]
gb|EJN03548.1| proton-translocating NADH-quinone oxidoreductase, chain N [Phyllobacterium sp. YR531]
(478 aa)

Score: 276 bits (705), Expect: 2.13208e-71
Length: 480, Idn/Pos/Gap = 171/264/26 (35%/55%/5%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           I+++ +  PEL L +    LL+ G F     Y       K    L V+     L L+   
Sbjct:   6 IANLTLMAPELLLAVGAMALLMVGAFSGEKSY-------KLVNGLSVVLLLLALALVAVF  58

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISN--ISLEKLNVFEFFLLFILSI 124
           P   + +  +F   N+S      +  LVG   V L++S+     EK + FEF +L +L+ 
Sbjct:  59 PQQGNAFGRAFI--NDSFSGFMKVLTLVG-SIVTLIMSSGFAKAEKFDKFEFPILILLAN 115

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           + + L+IS  D LS+Y+SLE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G
Sbjct: 116 VGMLLMISANDTLSLYLSLELQSLALYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYG 175

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           I+L+YG  G T F       + I    +  E    ++ GLVFI     FK+SA PFHMW+
Sbjct: 176 ISLVYGFTGHTGF-------EGIAHALAGPERQLGVVFGLVFIFAGLAFKISAVPFHMWT 228

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +   F    K+    L   +   +   + + WQ++ +  A  S+ LG F 
Sbjct: 229 PDVYEGAPTPVTAFFATAPKMAAMALLTRVSVDTFQPITHDWQQIVVFIAIASMILGAFA 288

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  Q   KR +AYSSI+H+G+ ++ +++    G   +  YM+IY++  LG FA +L++R 
Sbjct: 289 AIGQRNIKRLMAYSSISHMGYALVGLAAGTQVGVKGVAIYMLIYLVTTLGTFAFILAMR- 347

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
               + +  +  I +   LS+T+PI+A  + I++FS++GIPP+AGF+ K   FL  ++++
Sbjct: 348 ----RKDGNVEQIGDLAGLSRTNPIMATILTILMFSLAGIPPLAGFWGKWYTFLAAMQAN 403

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCL 484
           LY+L I  I  S +  FYY+RIIKI++FD       +VP+      VL  S LL+  + L
Sbjct: 404 LYALAIIGIVASVVGAFYYLRIIKIMWFDEPVGG--FVPVAGELRLVLGASGLLVLLYVL 461

ref|YP_469144.1| NADH dehydrogenase subunit N [Rhizobium etli CFN 42]
sp|Q2K9R9.1|NUON_RHIEC RecName: Full=NADH-quinone oxidoreductase subunit N; AltName: Full=NADH dehydrogenase I subunit N; AltName: Full=NDH-1 subunit N
gb|ABC90417.1| NADH-ubiquinone oxidoreductase chain N protein [Rhizobium etli CFN 42]
(481 aa)

Score: 276 bits (705), Expect: 2.31761e-71
Length: 448, Idn/Pos/Gap = 151/263/18 (33%/58%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++  PEL L +   +LL+ G+F  + +  G  +     G  +V+     L+L+    +
Sbjct:   9 SLHLSAPELILAVGALVLLMVGVF--SGERSGLVVT----GLAIVLLLASGLWLLFVPAE  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  F   +  +   +++K + L+  +  +F+ + +    +L+ FEF +L +L+ L I 
Sbjct:  63 GLA--FGGVYMADGFSRFMKLVALIGSLVALFMTMGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFTEIAQAL-SVEGARSL-----GLIFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +   F    K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFFAAAPKVAAMAMLTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVSGVMLYMVIYMIMTLGTFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  +++   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVEDVNDLAGLSATNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

emb|CAC50352.1| NADH dehydrogenase subunit 2 [Pellia epiphylla]
(418 aa)

Score: 275 bits (704), Expect: 2.6266e-71
Length: 381, Idn/Pos/Gap = 151/230/26 (39%/60%/6%)

Query:  97 CYVFLVISNIS----------LEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEML 146
           C +FL++S  S           E LN FE  +L +L   S+  +IS +D +++Y+++E+ 
Sbjct:  50 CQIFLLLSTASTMVMCLDYFKQESLNAFESIVLILLPTRSMLFMISAYDSIAMYLAIELQ 109

Query: 147 NLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ- 205
           +L FYV+A  +R SEFSTEAGLKY  LG FS+G+LL+G ++IYG  G+TNF +L+     
Sbjct: 110 SLCFYVIAASKRDSEFSTEAGLKYLNLGAFSSGILLYGCSMIYGFTGVTNFEELAKILTG 169

Query: 206 ---SIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIF 262
              ++   +S     + + +G++FI+  F FK++A PFHMW+PDVYEG+ T+    F I 
Sbjct: 170 YEITLFGAQS-----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTTATASFSIA 224

Query: 263 TKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINH 322
            KI+I    + +F  S ++    WQ+L    +  S+ LG   A AQ K KR LAYSSI H
Sbjct: 225 PKISILANMLRVFIYSSYD--PTWQQLFFFRSIASMILGALAAMAQNKVKRLLAYSSIGH 282

Query: 323 VGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTI 382
           VG++ I  S     G  SL+    IY+L+ + +FA +L+LR     + N  I+YI++   
Sbjct: 283 VGYLSIGFSCGTIEGIQSLLIGTFIYVLMTVNVFAMVLALR-----QQNRLIKYIADLGA 337

Query: 383 LSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFY 442
           L+KT+PI+A ++ I +FS +GIPP+AGF +K  +F   L    Y L +  +  S ++ FY
Sbjct: 338 LAKTNPILAITLSIAMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFY 397

Query: 443 YIRIIKIIYFDNCNVWLIYVP 463
           YIR +KI+YFD    W++Y P
Sbjct: 398 YIRFVKIMYFDTPKTWILYKP 418

pir||A42491 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 2 - evening primrose mitochondrion
gb|AAB18755.1| NADH dehydrogenase subunit 2 [Oenothera berteroana]
(488 aa)

Score: 275 bits (704), Expect: 2.90321e-71
Length: 482, Idn/Pos/Gap = 169/266/27 (35%/55%/5%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE+++     ILLI+G+ +ST+K   YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATSILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLK------WIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            +  F+NN  +      + + + LL     + +   +   E+ + FEF +L  L   S+ 
Sbjct:  68 -AHLFWNNLFRRDNFTYFCQILLLLSTAGTISMCFDSSEQERFDAFEFIVLIPLPTRSML 126

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
            +IS  D +++Y+++E  +L FYVLA  +R SEFSTEAG KY ILG F +G+LLFG ++I
Sbjct: 127 FMISAHDSIAMYLAIEPQSLCFYVLAASKRKSEFSTEAGSKYLILGAFPSGILLFGCSMI 186

Query: 189 YGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           YG  G T+F  L+  L    I   +S     + + +G++ I+  F FK++A PFHMW+PD
Sbjct: 187 YGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILSIAVGFLFKITAVPFHMWAPD 241

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIA 305
           +YEG+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A
Sbjct: 242 IYEGSPTPVTAFLSIAPKISI---SANISRVSIYGSYGATLQQIFFFCSIASMILGALAA 298

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
            AQTK KR LA+SSI HVG+I    S     G  SL+  + IY L  +  FA + +LR  
Sbjct: 299 MAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGLFIYALTTINAFAIVSALRQT 358

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R       ++YI++   L+KT+P  A +  I +FS +GIPP+AGF +K  +F   L    
Sbjct: 359 R-------VKYIADLGALAKTNPTSAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGA 411

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLN 485
           Y L    +  S +  FYYIR+ K ++FD    W++Y PMD++K+ +L+ +   +T   L 
Sbjct: 412 YFLAPVGVVTSVIGCFYYIRLAKRMFFDTPRTWILYEPMDRNKSLLLAMTSSFITSSFLY 471

Query: 486 PN 487
           P+
Sbjct: 472 PS 473

ref|YP_001532672.1| NADH dehydrogenase subunit N [Dinoroseobacter shibae DFL 12]
gb|ABV93071.1| proton-translocating NADH-quinone oxidoreductase [Dinoroseobacter shibae DFL 12]
(479 aa)

Score: 275 bits (704), Expect: 2.92753e-71
Length: 451, Idn/Pos/Gap = 155/243/22 (34%/53%/4%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
            DI I +PE+ L +     L+YG++  T K    P+L     +L    F  + F I  + 
Sbjct:   4 QDIAIVMPEIALAIFAMAGLMYGVY--TGKDRTAPLLV----WLTAAVFVGLAFWIGISA  57

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNV--FEFFLLFILSIL 125
           +     F   F  ++  ++ K   LL       LV+S   + KL +  FE+ +L  L+++
Sbjct:  58 EGDRVAFGGMFVDDSFARFAKITILLS--AAAILVMSLDHMSKLGILKFEYPILIALAVV 115

Query: 126 SIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGI 185
            + +++S  DL+++Y+ LE+ +L  YV+A+I R    STEAGLKYF+LG  S+G+LL+G 
Sbjct: 116 GMMMMVSAGDLMALYMGLELQSLALYVVASIHRDDSRSTEAGLKYFVLGALSSGMLLYGA 175

Query: 186 ALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +L YG  G T        F  I+   +  EI   LL GLVF++    FK+SAAPFHMW+P
Sbjct: 176 SLTYGYAGTT-------LFSGIITTATEGEISMGLLFGLVFLTAGLAFKVSAAPFHMWTP 228

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIA 305
           DVYEG+ T +  LF    K+    LF  +   +       WQ++    A  S+FLG+  A
Sbjct: 229 DVYEGSPTPVTALFATAPKVAAMALFARVVHDAFGNAIGDWQQIVAFLAVLSMFLGSIAA 288

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
             QT  KR +AYSSI H+GF ++ +++    G  +++ YM IY+ +N+G FA +LS+   
Sbjct: 289 IGQTDIKRLMAYSSIAHMGFALMGLAAGTVGGVQAMLIYMAIYVTMNIGTFAFILSME-- 346

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
              K    +  I+     +   P  A ++L+++FS++GIPP+ GFF K  V L  +   L
Sbjct: 347 ---KDGVAVTEIASLNQFASREPTKAMALLLLMFSLAGIPPLLGFFGKYTVLLAAVDGGL 403

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
             L I  +  S +  FYY+RI+  +YF   +
Sbjct: 404 TWLAIAGVMASVIGAFYYLRIVYYMYFGKAD 434

ref|YP_002544120.1| NADH dehydrogenase subunit N [Agrobacterium radiobacter K84]
ref|ZP_10535148.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. AP16]
gb|ACM26194.1| NADH-ubiquinone oxidoreductase chain N protein [Agrobacterium radiobacter K84]
gb|EJK87721.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. AP16]
(480 aa)

Score: 275 bits (703), Expect: 3.57659e-71
Length: 450, Idn/Pos/Gap = 153/261/19 (34%/58%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           ++ +++ IPEL L +   +LL+ G+F  + +  G  +       L V    +I+F+    
Sbjct:   7 LASLHLSIPELILAVGALVLLMIGVF--SGERSGPTVTGLAIAVLAVAGL-WIIFVPGEG  63

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
             +   Y    F      +++K + L+  I  +F+ +     ++L+ FEF +L +L+ L 
Sbjct:  64 LAYGGAYLADGFS-----RFMKIVALVGSIVAMFMSMGQAREQQLDRFEFPVLLLLATLG 118

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           I L+IS  DL+S+Y+SLE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++
Sbjct: 119 ILLMISAHDLISLYLSLELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMS 178

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G T F  ++    +  + +S+      L+ GLVF+     FK+SA PFHMW+PD
Sbjct: 179 LVYGFTGHTTFDAIATALSA--ETRSL-----GLVFGLVFVLAGLAFKISAVPFHMWTPD 231

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  T +   F    K+    +   +  T+   +   WQ++ +  +  S+ LG F A 
Sbjct: 232 VYEGAPTPVTAFFAAAPKVAAMAILTRIVITAFHPVLADWQQIIVFISIASMVLGAFAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q  FKR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG+FA ++++R   
Sbjct: 292 GQRNFKRLMAYSSIGHMGYALVGLAAGNQTGVSGVMLYMVIYMVMTLGVFAIIMAMRR-- 349

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             K   Q+  + +   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY
Sbjct: 350 --KDGRQVENVDDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFGKYFVFVAAIQAHLY 407

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           +L I  +  S +  +YY+R+IK+++FD   
Sbjct: 408 ALAIIGVLSSVVGAYYYLRVIKLMWFDEAK 437

ref|ZP_12907934.1| NADH:ubiquinone oxidoreductase subunit N [Agrobacterium tumefaciens CCNWGS0286]
gb|EHH08760.1| NADH:ubiquinone oxidoreductase subunit N [Agrobacterium tumefaciens CCNWGS0286]
(480 aa)

Score: 275 bits (703), Expect: 3.92039e-71
Length: 452, Idn/Pos/Gap = 154/251/25 (34%/55%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIF---YSTNKYYGYPILSKNFGYLVVITFTYILFLII  64
           + ++I  PEL L +    LL+ G+F    ST    G  +       L+++   +I+F   
Sbjct:   8 ASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLAV------ALLLVVGLWIIFAPA  61

Query:  65 NTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSI 124
           +   F   Y    F       ++K + L+  I  + L +     E +  FE+ +L +L+ 
Sbjct:  62 SGVAFGGVYIADAFG-----NFMKVLALIGSITAMILAVGQGRFEPIGRFEYPVLLVLAT 116

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           L I L+IS  +L+S+Y++LE+ +L  YV+  I R S  STEAGLKYF+LG  S+G+LL+G
Sbjct: 117 LGILLMISANNLISLYMALELQSLALYVVCAINRESLRSTEAGLKYFVLGALSSGMLLYG 176

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           ++L+YG  G T F +++   Q +  E   L     L+ GLVF+     FK+SA PFHMW+
Sbjct: 177 MSLVYGFTGNTGFTEIA---QVLAAETRSL----GLVFGLVFVLAGLAFKISAVPFHMWT 229

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +        KI    + + +   +   +F  WQ++ +  +  S+ LG+F 
Sbjct: 230 PDVYEGAPTPVTAFLSAAPKIGAMAILVRIVIEAFQPVFADWQQIVVFISIASMLLGSFA 289

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  Q   KR +AYSSI H+G+ ++ +++    G   +I YM IY+++ LG FA +LS+R 
Sbjct: 290 AIGQKNIKRLMAYSSIGHMGYALVGLAAGTEAGISGVILYMTIYMVMTLGTFACILSMRR 349

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
               K    +  + +   LS ++P +A  + I++FS++GIPP+AGFF K  VFL  +++ 
Sbjct: 350 ----KEIGNVETVEDLAGLSSSNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLAAIEAK 405

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           LY L I  +  S +  +YYIR++K+++FD   
Sbjct: 406 LYPLAIIGVIGSVVGAYYYIRVVKVMWFDEAK 437

ref|ZP_08528425.1| NADH dehydrogenase subunit N [Agrobacterium sp. ATCC 31749]
gb|EGL64867.1| NADH dehydrogenase subunit N [Agrobacterium sp. ATCC 31749]
(480 aa)

Score: 275 bits (703), Expect: 4.0874e-71
Length: 452, Idn/Pos/Gap = 153/251/25 (33%/55%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIF---YSTNKYYGYPILSKNFGYLVVITFTYILFLII  64
           + ++I  PEL L +    LL+ G+F    ST    G  +       L+++   +I+F   
Sbjct:   8 ASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLAV------ALLLVVGLWIIFAPA  61

Query:  65 NTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSI 124
           +   F   Y    F       ++K + L+  I  + L +     E +  FE+ +L +L+ 
Sbjct:  62 SGVAFGGVYIADAFG-----NFMKVLALIGSITAMILAVGQGRFEPIGRFEYPVLLVLAT 116

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           L I L+IS  +++S+Y++LE+ +L  YV+  I R S  STEAGLKYF+LG  S+G+LL+G
Sbjct: 117 LGILLMISANNMISLYMALELQSLALYVVCAINRESLRSTEAGLKYFVLGALSSGMLLYG 176

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           ++L+YG  G T F +++   Q +  E   L     L+ GLVF+     FK+SA PFHMW+
Sbjct: 177 MSLVYGFTGNTGFTEIA---QVLASETRSL----GLVFGLVFVLAGLAFKISAVPFHMWT 229

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +        KI    + + +   +   +F  WQ++ +  +  S+ LG+F 
Sbjct: 230 PDVYEGAPTPVTAFLSAAPKIGAMAILVRIVVEAFQPVFADWQQIVVFISIASMLLGSFA 289

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  Q   KR +AYSSI H+G+ ++ +++    G   +I YM IY+++ LG FA +LS+R 
Sbjct: 290 AIGQKNIKRLMAYSSIGHMGYALVGLAAGTEAGISGVILYMTIYMVMTLGTFACILSMRR 349

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
               K    +  + +   LS ++P +A  + I++FS++GIPP+AGFF K  VFL  +++ 
Sbjct: 350 ----KEIGNVENVEDLAGLSSSNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLAAIEAK 405

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           LY L I  +  S +  +YYIR++K+++FD   
Sbjct: 406 LYPLAIIGVIGSVVGAYYYIRVVKVMWFDEAK 437

ref|ZP_07657483.1| NADH-quinone oxidoreductase subunit n [Roseibium sp. TrichSKD4]
gb|EFO33628.1| NADH-quinone oxidoreductase subunit n [Roseibium sp. TrichSKD4]
(479 aa)

Score: 275 bits (702), Expect: 4.74977e-71
Length: 491, Idn/Pos/Gap = 163/269/22 (33%/54%/4%)

Query:   1 MVIIINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYIL  60
           M  +  + D+   +PE+ L +   +LL+ G+F    K   + I     G   +I  T ++
Sbjct:   1 MSDLTQMPDLMPVMPEIILAVGAMVLLMIGVF--GGKGISHQIFGGAMG---LIAATGLV  55

Query:  61 FLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLF 120
            L I T   L T F   F  +    ++K + L+     + +  +    +  + FE+ +L 
Sbjct:  56 MLFIPT---LGTTFGGSFVSDEYSYFLKLLVLIGSFFAIAMSWAYAKTQSFDKFEYPVLI 112

Query: 121 ILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGL 180
           +L+ L + L++S  D++++Y+ LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+
Sbjct: 113 VLATLGMMLMLSANDMIALYLGLELQSLALYVVAAINRDSIRSTEAGLKYFVLGALSSGM 172

Query: 181 LLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPF 240
           LL+G++L+YG  G   F ++S     ++ E         +++GLVFI     FK+SA PF
Sbjct: 173 LLYGMSLVYGFSGQIGFAEIS----EVLAENGA---SLGVIIGLVFILAGLVFKISAVPF 225

Query: 241 HMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFL 300
           HMW+PDVYEG  T +   F    K+    L + +   +   + + WQ++ +  +  S+ L
Sbjct: 226 HMWTPDVYEGAPTPVTAFFAAAPKVAAMGLLVRVVIDAFQPVTHDWQQVIVFVSIASMAL 285

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G F A  QT  KR +AYSSI H+G+ ++ +S+    G   +IFYM  Y+ + LG+FA +L
Sbjct: 286 GAFAAIGQTNIKRLMAYSSIGHMGYALVGLSAGTQAGVEGVIFYMTAYLGMTLGVFACIL 345

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           S+R     + +  +  I+E + LSKT+  +A  + ++L+S++GIPP  GFF K  VF   
Sbjct: 346 SMR-----RKDTMVEEINELSGLSKTNLPMAIILAMLLWSLAGIPPFVGFFGKWFVFSAA 400

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           +++ LY L I  +  S +  FYY+RIIK+++FD+      + PM     F+L  S L + 
Sbjct: 401 VEAGLYPLAIIGVLASVVGCFYYLRIIKVMFFDDAVEG--FDPMPVELRFILGLSGLFIV 458

Query: 481 FFCLNPNLIIN 491
            F L P  I+ 
Sbjct: 459 AFALVPGPIVT 469

ref|ZP_11197732.1| NADH:ubiquinone oxidoreductase subunit N [Rhizobium lupini HPC(L)]
gb|EKJ96495.1| NADH:ubiquinone oxidoreductase subunit N [Rhizobium lupini HPC(L)]
(480 aa)

Score: 274 bits (700), Expect: 7.96781e-71
Length: 452, Idn/Pos/Gap = 152/251/25 (33%/55%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIF---YSTNKYYGYPILSKNFGYLVVITFTYILFLII  64
           + ++I  PEL L +    LL+ G+F    ST    G  +       L+++   +I+F   
Sbjct:   8 ASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLAV------ALLLVVGLWIIFAPA  61

Query:  65 NTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSI 124
           +   F   Y    F       ++K + L+  I  + L +     E +  FE+ +L +L+ 
Sbjct:  62 SGVAFGGVYIADAFG-----NFMKVLALIGSITAMILAVGQGRFEPIGRFEYPVLLVLAT 116

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           L I L+IS  +L+S+Y++LE+ +L  YV+  I R S  STEAGLKYF+LG  S+G+LL+G
Sbjct: 117 LGILLMISANNLISLYMALELQSLALYVVCAINRESLRSTEAGLKYFVLGALSSGMLLYG 176

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           ++L+YG  G T F +++   Q +  E   L     L+ GLVF+     FK+SA PFHMW+
Sbjct: 177 MSLVYGFTGNTGFTEIA---QVLASETRSL----GLVFGLVFVLAGLAFKISAVPFHMWT 229

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +        KI    + + +   +   +F  WQ++ +  +  S+ LG+F 
Sbjct: 230 PDVYEGAPTPVTAFLSAAPKIGAMAILVRIVIEAFQPVFADWQQIVVFISIASMLLGSFA 289

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  Q   KR +AYSSI H+G+ ++ +++    G   +I YM +Y+++ LG FA +L++R 
Sbjct: 290 AIGQKNIKRLMAYSSIGHMGYALVGLAAGTQAGVAGVILYMAVYMVMTLGTFACILAMRR 349

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
               K    +  + +   LS ++P +A  + I++FS++GIPP+AGFF K  VFL  +++ 
Sbjct: 350 ----KEIGNVENVEDLAGLSSSNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLAAIEAK 405

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           LY L I  +  S +  +YYIR++K+++FD   
Sbjct: 406 LYPLAIIGVIGSVVGAYYYIRVVKVMWFDEAK 437

ref|ZP_18333520.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. viciae USDA 2370]
gb|EJA98696.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. viciae USDA 2370]
(480 aa)

Score: 274 bits (700), Expect: 7.96781e-71
Length: 452, Idn/Pos/Gap = 152/251/25 (33%/55%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIF---YSTNKYYGYPILSKNFGYLVVITFTYILFLII  64
           + ++I  PEL L +    LL+ G+F    ST    G  +       L+++   +I+F   
Sbjct:   8 ASLHIATPELILAIGALALLMIGVFSGDKSTTTVTGLAV------ALLLVVGLWIIFAPA  61

Query:  65 NTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSI 124
           +   F   Y    F       ++K + L+  I  + L +     E +  FE+ +L +L+ 
Sbjct:  62 SGVAFGGVYIADAFG-----NFMKVLALVGSITAMILAVGQGRFEPIGRFEYPVLLVLAT 116

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           L I L+IS  +L+S+Y++LE+ +L  YV+  I R S  STEAGLKYF+LG  S+G+LL+G
Sbjct: 117 LGILLMISANNLISLYMALELQSLALYVVCAINRESLRSTEAGLKYFVLGALSSGMLLYG 176

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           ++L+YG  G T F +++   Q +  E   L     L+ GLVF+     FK+SA PFHMW+
Sbjct: 177 MSLVYGFTGNTGFTEIA---QVLASETRSL----GLVFGLVFVLAGLAFKISAVPFHMWT 229

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +        KI    + + +   +   +F  WQ++ +  +  S+ LG+F 
Sbjct: 230 PDVYEGAPTPVTAFLSAAPKIGAMAILVRIVIEAFQPVFADWQQIVVFISIASMLLGSFA 289

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  Q   KR +AYSSI H+G+ ++ +++    G   +I YM +Y+++ LG FA +L++R 
Sbjct: 290 AIGQKNIKRLMAYSSIGHMGYALVGLAAGTQAGVAGVILYMAVYMVMTLGTFACILAMRR 349

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
               K    +  + +   LS ++P +A  + I++FS++GIPP+AGFF K  VFL  +++ 
Sbjct: 350 ----KEIGNVENVEDLAGLSSSNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLAAIEAK 405

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           LY L I  +  S +  +YYIR++K+++FD   
Sbjct: 406 LYPLAIIGVIGSVVGAYYYIRVVKVMWFDEAK 437

ref|ZP_16042200.1| NADH:ubiquinone oxidoreductase subunit N [Bradyrhizobium sp. CCGE-LA001]
gb|EJZ33377.1| NADH:ubiquinone oxidoreductase subunit N [Bradyrhizobium sp. CCGE-LA001]
(478 aa)

Score: 274 bits (700), Expect: 9.4937e-71
Length: 443, Idn/Pos/Gap = 155/252/25 (34%/56%/5%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PEL L +    LL+ G +            +K    L V+    +  L+   P      
Sbjct:  14 LPELVLAVGAMALLMLGAYRGQET-------TKTVTSLAVVLLIVVGALVYMQPAGKQVT  66

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISN--ISLEKLNVFEFFLLFILSILSIFLII 131
           F   F  ++  +++K I  L+G   V LV+S   +S     +FE+ +L +LS L + ++I
Sbjct:  67 FGGSFIVDDFARFMK-ILALIG-SAVTLVLSTEFLSDPSRRIFEYAILVLLSTLGMMVLI 124

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  DL+S+Y+ LE+++L  YV+A   R +  STEAGLKYF+LG  S+G+LL+G +L+YG 
Sbjct: 125 SAGDLISLYLGLELMSLALYVVAASNRDNAKSTEAGLKYFVLGALSSGMLLYGSSLVYGF 184

Query: 192 IGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGT 251
            G  +F         I    +I  +   L+ GLVF+     FK+SA PFHMW+PDVYEG 
Sbjct: 185 TGTVSF-------TGIASAATISNV--GLVFGLVFLLAGLCFKVSAVPFHMWTPDVYEGA 235

Query: 252 LTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKF 311
            T +   F    K+    +F  +  T+   + + WQ++ +  A  S+ LG+F A  QT  
Sbjct: 236 PTPVTAFFASAPKVAALAVFTRVTLTAFPGIVSQWQQILVFVAIASMALGSFAAIGQTNI 295

Query: 312 KRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFN 371
           KR +AYSSI H+GF ++ ++S    G   ++ Y++IY+ + LG F+ +L+++  RN    
Sbjct: 296 KRLMAYSSIGHMGFALVGLASGTVEGAQGVLMYIVIYVAMTLGSFSIILAMK--RN---G 350

Query: 372 HQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIF 431
             +  IS+F  LS+T+P++AF   ++LFS++GIPP+AGFF K  VF+  +K++L++L + 
Sbjct: 351 QAVEQISDFAGLSRTNPLLAFMFAMLLFSLAGIPPLAGFFAKWYVFVAAIKANLFTLAVI 410

Query: 432 AITISCLATFYYIRIIKIIYFDN 454
            +  S +  +YY+ I+K +YFD 
Sbjct: 411 GVLTSVVGAYYYLAIVKTMYFDE 433

ref|YP_003693772.1| proton-translocating NADH-quinone oxidoreductase subunit N [Starkeya novella DSM 506]
gb|ADH89153.1| proton-translocating NADH-quinone oxidoreductase, chain N [Starkeya novella DSM 506]
(475 aa)

Score: 273 bits (699), Expect: 1.09405e-70
Length: 416, Idn/Pos/Gap = 146/239/16 (35%/57%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
           +T F   F  +   +++K + LL     + + +  + +EK + FEF +L +LS L + ++
Sbjct:  61 ATLFGGSFQVDEYSRFLKVLALLGAGGTLAMSVEWLKVEKQSRFEFPILVLLSTLGMMML 120

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           IS  DL+++Y+ LE+++L  YV+A   R S  STEAGLKYF+LG  S+G+LL+G +LIYG
Sbjct: 121 ISAGDLIALYMGLELMSLALYVIAANNRDSVRSTEAGLKYFVLGALSSGMLLYGASLIYG 180

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G  NF  ++       +E S+      L+ G+VF+     FK+SA PFHMW+PDVYEG
Sbjct: 181 FTGSVNFERIA----EAAREPSL-----GLIFGIVFMFAGLCFKVSAVPFHMWTPDVYEG 231

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
           + T +   F    K+    +F+     +L  + + WQ++ +  A  S+ LG+F A  Q  
Sbjct: 232 SPTPVTAFFAAAPKVAAMAVFVRFAAEALPNVTHQWQQIVVFVAIASMALGSFAAIGQRN 291

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI H+G+ ++ +++    G   ++ YM IY+ + LG FA +LS+R       
Sbjct: 292 LKRLMAYSSIGHMGYALVGLAAGTEQGVRGVLVYMTIYMAMTLGTFACILSMRRKDGVVE 351

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           N++     +   L++T P++AF +  ++FS++GIPP+AGF  K  +FL  +++ LY+L +
Sbjct: 352 NYE-----DLAGLARTRPLMAFFLAALMFSLAGIPPLAGFLAKYYIFLAAIEAGLYTLAV 406

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNP 486
             +  S +  FYY+RI+K++YFD       + PM      VL  S L    F + P
Sbjct: 407 IGVLTSVVGAFYYLRIVKVMYFDEPAPG--FEPMPTELRMVLGVSGLFTLLFFVYP 460

ref|YP_001874784.1| NADH dehydrogenase subunit 2 [Hemiselmis andersenii]
gb|ACC78238.1| NADH dehydrogenase subunit 2 [Hemiselmis andersenii]
(501 aa)

Score: 273 bits (698), Expect: 1.48975e-70
Length: 472, Idn/Pos/Gap = 177/284/6 (37%/60%/1%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE++L   +  L+IYG+  +T+ Y  YPIL  N  +L +    ++  L    P   +  F
Sbjct:  12 PEIFLISIIQYLIIYGVICTTSSYLNYPILVNNLSWLSLQVLFFLGLLTSYNPLTYTLTF  71

Query:  75 PSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTF 134
                 +    +IKTI ++   C + + +     E++N FE  +L +L++  I L+IS+F
Sbjct:  72 NDLLILDEFSIFIKTIIIITTACTILISVKYNHFERINAFESIILLLLAVTGILLLISSF 131

Query: 135 DLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGI 194
           +L+SIY+++E+ +   Y+LA + RTSEFSTEAGLKYF+LG FS+GLLLFG++L+YG  GI
Sbjct: 132 NLISIYLAIELQSFCLYILAALNRTSEFSTEAGLKYFVLGAFSSGLLLFGLSLVYGFTGI 191

Query: 195 TNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTS 254
            N  DL   FQ +      L I   + L  +FI T   FKLSA PFH+W+PD+YEG  T+
Sbjct: 192 LNLGDL---FQFLCVNPYNLHIINGINLASLFILTGLLFKLSAVPFHLWAPDIYEGAPTT 248

Query: 255 IITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRF 314
           I   F    KI I  L         +++F  WQ+L +I A  S+ LGTF A  Q K KR 
Sbjct: 249 ITAFFASVPKIGILALLTRFAYLGFYDIFFSWQELFVISAICSILLGTFGALMQLKLKRL 308

Query: 315 LAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQI 374
           LAYS+I H+GF+++  S   + G ++   Y+++Y+++ +  F  LL +  +R  +   ++
Sbjct: 309 LAYSAIGHMGFMLMGFSCGCFEGIHATFVYIVLYMMMAVLSFTFLLGI--YRKKRLT-RL 365

Query: 375 RYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAIT 434
            Y+ + TIL+ ++P+I  SI +  FS++GIPP+AGFF+K+ +F+  ++SS+Y++ I  + 
Sbjct: 366 NYLKDLTILTNSNPLIGLSIALTFFSMAGIPPLAGFFSKMFLFIVAIQSSMYTIAIIVVI 425

Query: 435 ISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNP 486
            S ++ FYYIR+IK+++FD   +W+  V  D+ K+ ++S     L  F + P
Sbjct: 426 TSVISCFYYIRVIKLVFFDANYLWVTLVRFDREKSILVSVITTFLLCFAIYP 477

ref|ZP_08073231.1| proton-translocating NADH-quinone oxidoreductase, chain N [Methylocystis sp. ATCC 49242]
gb|EFX99148.1| proton-translocating NADH-quinone oxidoreductase, chain N [Methylocystis sp. ATCC 49242]
(478 aa)

Score: 273 bits (698), Expect: 1.52751e-70
Length: 486, Idn/Pos/Gap = 151/276/23 (31%/56%/4%)

Query:  13 FIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLST  72
           F+PE+ L + V +L++ G +       G+ ++ +     V +    IL ++++T     +
Sbjct:  11 FLPEIILAVGVMVLILIGAWRGER---GFSLVDE---MAVGLLGLAILAIVLSTKSVDQS  64

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIS 132
            F   F  +   +++K + L+  +  + + +  +    L  FE+ +L ILS L + L+IS
Sbjct:  65 AFDGAFMDDAFSRFMKVLTLVGALVSILMSVDWLQRNGLEKFEYPVLVILSTLGMMLLIS 124

Query: 133 TFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCI 192
             +L+++Y+ LE+++L  YV+A   R    S+EAGLKYF+LG  S+G++L+G +L+YG  
Sbjct: 125 ADNLIALYLGLELMSLALYVMAAFARDDGRSSEAGLKYFVLGALSSGMMLYGSSLLYGFA 184

Query: 193 GITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTL 252
           G  +F  ++     ++ +++    P  ++ GLVF+     FK+SAAPFHMW+PDVYEG  
Sbjct: 185 GTVSFSGIA----QVVSDQA----PIGVIFGLVFVLAGLAFKMSAAPFHMWTPDVYEGAP 236

Query: 253 TSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFK 312
           T +   F    K+    +   +  T+   + + W+++ +  A  S  LG+F A  Q   K
Sbjct: 237 TPVTAFFASAAKMAAVAITARIVITAFPGVTHQWRQIIVFLAIASTLLGSFAAIGQNNIK 296

Query: 313 RFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR-NFRNYKFN 371
           R +AYSSI H+GF +I +++ N  G   +  Y+ +Y+++ LG FA++L++R N RN    
Sbjct: 297 RLMAYSSIGHMGFALIGLAAGNEAGVKGVAIYLAVYLVMTLGSFAAILAMRVNGRN---- 352

Query: 372 HQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIF 431
             +  IS+   LS+T+ ++AF + +++FS++G+PP+AGFF K  V L  + + LY L + 
Sbjct: 353 --VENISDLAGLSRTNGLMAFFMAMLMFSLAGVPPLAGFFAKYYVLLAAVDAGLYPLAVI 410

Query: 432 AITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLIIN 491
            +  S +A FYY+R++K++YFD+        P+      VL+ S + L  F + P  +++
Sbjct: 411 GVLASAVAAFYYLRVVKVMYFDDPAPGFDRSPLAIRA--VLAVSTIALLGFWIYPAPVMD 468

Query: 492 SIYIIS 497
           +  + +
Sbjct: 469 AATVAA 474

ref|YP_665693.1| NADH dehydrogenase subunit 2 [Mesostigma viride]
gb|AAL36732.1|AF353999_12 NADH dehydrogenase subunit 2 [Mesostigma viride]
(497 aa)

Score: 273 bits (697), Expect: 1.73116e-70
Length: 473, Idn/Pos/Gap = 177/276/21 (37%/58%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           + D+  FIP+L+L + + ILL+ G   S    +   + +    +L   T    L L+  T
Sbjct:  11 VHDLVAFIPDLFLLVAILILLVVGSSISLKSVHEKTVWASTILWLSFWTLILTLVLMKET  70

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLL----VGICYVFLVISNISLEKLNVFEFFLLFIL 122
           P      F     FN++L      F+L    +G C + L ++ ++  + + FEF LLF+L
Sbjct:  71 P------FSHAILFNHALLLDPLSFVLKVSILGTCLLLLSLA-VNKPESHSFEFPLLFLL 123

Query: 123 SILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLL 182
           S   + L+  ++DL+S+Y+S+E+ +  F++LA  RR SEFSTEAGLKYF+LG FS+GL L
Sbjct: 124 SAWGMGLMAESYDLISMYLSIELQSFCFFLLAASRRNSEFSTEAGLKYFLLGAFSSGLFL 183

Query: 183 FGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTD-LLLGLVFISTAFFFKLSAAPFH 241
           FG + IYG  G T+  +L+   +S+   +S+    ++ L++G++F+S  F FK  AAPFH
Sbjct: 184 FGSSFIYGFTGQTSLEELAKATESLFALESVYNNESNGLIIGILFLSAGFLFKSGAAPFH 243

Query: 242 MWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLG 301
           MW+PDVYEG+ T++  LF I  KI +F +F+  F   L  LF  WQ L    +  S+ +G
Sbjct: 244 MWTPDVYEGSPTTVTALFSILPKIALFGMFLRFFFQGLSSLFIQWQTLFFFSSLLSMIVG 303

Query: 302 TFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLS 361
              A +QTK KR  AYSSI HVG+ +I  +  N  G  SL+F + IYI++ L IF  LL+
Sbjct: 304 -ITAISQTKLKRLFAYSSIGHVGYFLIGFAVANPQGVQSLLFALGIYIVMTLHIFTFLLA 362

Query: 362 LRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCL 421
                N K      Y ++ T  +K +P++A S+ +ILFS++GIPP+AGF +K  +F   L
Sbjct: 363 AAP-ENRK------YCADLTSFAKINPVVALSLALILFSMAGIPPLAGFLSKFYLFRIAL 415

Query: 422 KSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVW-LIYVPMDKSKAFVLS 473
            S   SL I  +  S + ++YYIR+++I+YF     +  ++ P+ K  + +L 
Sbjct: 416 ASQFTSLAILGVITSVITSYYYIRLVRIMYFGKPLEYNTMFSPIPKQHSLILG 468

ref|YP_002975197.1| NADH dehydrogenase subunit N [Rhizobium leguminosarum bv. trifolii WSM1325]
gb|ACS55658.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WSM1325]
(481 aa)

Score: 273 bits (697), Expect: 1.8818e-70
Length: 448, Idn/Pos/Gap = 150/262/18 (33%/58%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++ +PEL L +   +LL+ G+F  + +  G  +     G  +V+     L+L+    +
Sbjct:   9 SLHLSVPELILAVGALVLLMVGVF--SGERSGLVVT----GLAIVLLLASGLWLLFVPAE  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  +   +  +   +++K + L+  +  +F+ I +    +L+ FEF +L +L+ L I 
Sbjct:  63 GLA--YGGVYMADGFSRFMKLVALIGSLVAIFMSIGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFSEIAQAL-SVEGARSL-----GLIFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFLAAAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVTGVMLYMVIYMVMTLGTFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  + +   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVENVDDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

emb|CBJ18017.1| NADH dehydrogenase subunit 2 [Ectocarpus siliculosus]
(494 aa)

Score: 273 bits (697), Expect: 2.06269e-70
Length: 484, Idn/Pos/Gap = 172/280/15 (35%/57%/3%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D   F+PEL+L +++ ++L++G F        +  L+ +   L        L L+IN P
Sbjct:   9 NDTVAFLPELFLAISILVVLLHGSFLGVIAASLHSYLTSSMVRLTTAILFLSLLLVINNP  68

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLE-KLNVFEFFLLFILSI-L 125
               T + + F  ++   W K I + +G+ +   V  +     +   +EFF+ FIL I L
Sbjct:  69 VESQTLWNAIFIADHLSTWAKFI-IFIGLLFCVSVSESYMFSARFRAYEFFV-FILGIAL 126

Query: 126 SIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGI 185
           S+ L+IS++DLLSIY+S+E L+LIFYVLA  ++ S FS EAGLKYFILG  ++   LFG 
Sbjct: 127 SLCLLISSYDLLSIYLSMEFLSLIFYVLAAWKKNSYFSAEAGLKYFILGSVASIFFLFGS 186

Query: 186 ALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +LIY  +G TN   L+L  +++    + +        GLV + +A  FKL AAP+HMW  
Sbjct: 187 SLIYFSLGTTNLASLALLTENLYVSSAFIY------FGLVCLVSALLFKLGAAPYHMWIA 240

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFI 304
           DVYEG  T +  +F +  K+  F + + +  TS + LF  +W+    IC   SLF+G   
Sbjct: 241 DVYEGAPTLVSLIFALVPKVAFFVVVLRIAFTSFWSLFPTLWEDFFCICGLLSLFIGCLC 300

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
              +TK KR LA+SS+ HVGF+ + ++S +  G  +++FY++ Y+L    ++  +L L  
Sbjct: 301 GLGETKIKRILAFSSVGHVGFLCLGLASGSIEGIQAVLFYLVFYMLTASFLWVYVLHL-- 358

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
             +   N  +   ++   L +++P + F +++++FS++GIPP  GFF KL +F+  + SS
Sbjct: 359 --DLTSNSSLLTFADAIGLIRSNPFLGFGVVLMIFSLAGIPPFGGFFAKLNIFIGLIDSS 416

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCL 484
            + + +FA+  S ++ FYYIR+IKI YF+  N W  + P+ K  + VL  S L++ FF  
Sbjct: 417 FFIVAVFAVLTSVISAFYYIRLIKIFYFEKNNNWFFFAPLTKGASIVLVLSGLIIIFFLF 476

Query: 485 NPNL 488
           +PNL
Sbjct: 477 SPNL 480

ref|YP_002608350.1| NADH dehydrogenase subunit 2 [Vitis vinifera]
emb|CAQ77578.1| NADH dehydrogenase subunit 2 [Vitis vinifera]
(488 aa)

Score: 273 bits (697), Expect: 2.11498e-70
Length: 479, Idn/Pos/Gap = 167/263/21 (34%/54%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYL--VVITFTYILFLIINTPDFLST  72
           PE+++     ILLI+G+ +ST+K Y YP L  N G+L  + +  T +L         ++ 
Sbjct:  10 PEIFIINATSILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAH  69

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGIC-YVFLVISNISLEKLNVFEFFLLFILSILSIFLII 131
            F +  F  ++  +   I LL+     + +   +   E+ +  E  +L  L   S+  +I
Sbjct:  70 LFRNNLFRRDNFTYFCQILLLLSTAGTISMCFDSSEQERFDASESIVLIPLPTRSMLFMI 129

Query: 132 STFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGC 191
           S  D +++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG F +G+ LFG ++IYG 
Sbjct: 130 SAHDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGIFLFGCSMIYGS 189

Query: 192 IGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYE 249
            G T+F  L+  L    I   +S     + L +G++ I+  F FK++A PFHMW+PD+YE
Sbjct: 190 TGATHFDQLAKILTGYEITGARS-----SGLFMGILSIAVGFLFKITAVPFHMWAPDIYE 244

Query: 250 GTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIAFAQ 308
           G+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A AQ
Sbjct: 245 GSPTPVTAFLSIAPKISIS---ANISRVSIYGSYGATLQQIFFFCSIASMILGALAAMAQ 301

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
           TK KR LA+SSI HVG+I   +S     G  SL+  + IY  + +  FA +L+LR  R  
Sbjct: 302 TKVKRPLAHSSIGHVGYIRTGLSCGTIEGIQSLLIGIFIYASMTIDAFAIVLALRQTR-- 359

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
                ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    Y L
Sbjct: 360 -----VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFL 414

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPN 487
               +  S +  FYYIR  K ++FD    W++Y PMD+ K+ +L+ +   +T   L P+
Sbjct: 415 APVGVVTSVIGRFYYIRFAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSSFLYPS 473

ref|ZP_07373357.1| NADH-quinone oxidoreductase chain 14 [Ahrensia sp. R2A130]
gb|EFL90002.1| NADH-quinone oxidoreductase chain 14 [Ahrensia sp. R2A130]
(477 aa)

Score: 272 bits (696), Expect: 2.4783e-70
Length: 356, Idn/Pos/Gap = 136/221/15 (38%/62%/4%)

Query: 109 EKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGL 168
           E  + FE+ +L IL+ + + +++S  DL+++Y+ LEM  L  YV+A I R S  STEAGL
Sbjct: 100 ENFDRFEYPILVILATVGMLIMVSANDLITLYLGLEMQALALYVIAAINRDSLRSTEAGL 159

Query: 169 KYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFIS 228
           KYF+LG  S+G+LL+G++LIYG  G TNF  ++   +++  E+S+      L+ G+VF+ 
Sbjct: 160 KYFVLGALSSGMLLYGMSLIYGFTGHTNFAGIA---EAMTAERSL-----GLVFGIVFVL 211

Query: 229 TAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQK 288
               FK+SA PFHMW+PDVYEG  T +   F    KI    + + +   +       WQ+
Sbjct: 212 AGIAFKISAVPFHMWTPDVYEGAPTPVTAFFSAAPKIAAMAMLVRVVYGAFEPAVADWQQ 271

Query: 289 LTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIY 348
           +    A  S+ LG F A  QT  KR +AYSSI ++GF ++ +++ +  G   ++ YM+IY
Sbjct: 272 IITFIAIASMGLGAFAAIGQTNIKRLMAYSSIANMGFALVGLAAGSQEGVSGVVLYMIIY 331

Query: 349 ILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIA 408
           + + LG FA +L++R     + +  +  I++ + LS+++P++A ++ I +FS++GIPP+A
Sbjct: 332 MAMTLGTFACILAMR-----RTDGMVEDITDLSGLSRSNPMMALALTIFMFSLAGIPPLA 386

Query: 409 GFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPM 464
           GF+ K  VFL  ++S LY L +  +  S +  FYYIRI+KI++FD+      +VPM
Sbjct: 387 GFWAKYFVFLAAIQSELYILSVIGVLASVVGAFYYIRIVKIMWFDDGEP--AFVPM 440

ref|YP_448661.1| NADH dehydrogenase subunit 2 [Desmarestia viridis]
gb|AAS79047.1| NADH dehydrogenase subunit 2 (mitochondrion) [Desmarestia viridis]
(496 aa)

Score: 272 bits (696), Expect: 2.62736e-70
Length: 482, Idn/Pos/Gap = 167/279/9 (34%/57%/1%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D   F+PEL+L +++ ++L++G F   +    Y  L+ +   L  I     L L+IN P
Sbjct:   9 NDTAAFLPELFLAISLLVVLLHGSFLGVSAASLYTYLTPSIARLTSIILFLSLLLVINNP  68

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
               T + + F  ++   W K I  L  +  V +  + +   +   +E ++  I   LS+
Sbjct:  69 VESQTLWNALFVTDHLAIWAKFIVFLGLLFCVSVSEAYMFSARFRAYEIYVFIIGIGLSL 128

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS++DLLSIY+S+E L+LIFYVLA+ ++ S FS EAGLKYFILG  ++   LFG +L
Sbjct: 129 CLLISSYDLLSIYLSMEFLSLIFYVLASWKKNSYFSAEAGLKYFILGSVASLFFLFGASL 188

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           IY  +G TN    +L  ++++     L       LGL+ + +A  FKL AAP+HMW  DV
Sbjct: 189 IYFTMGTTNLGAFALLTENLVTSSPFLY------LGLICVVSALLFKLGAAPYHMWIADV 242

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIAF 306
           YEG+ T +  +F +  K +IF +   L  TS +  F ++W+    IC   SL +G     
Sbjct: 243 YEGSPTLVSFIFAVVPKFSIFVVISRLIFTSFWSFFPSLWEDFFCICGLLSLSIGCLCGL 302

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            +TK KR LA+SS+ HVGF+ + ++S +  G  +++FY++IY+L    ++  +L L    
Sbjct: 303 GETKIKRLLAFSSVGHVGFLCLGLASGSIEGLQAVLFYLLIYMLTAAFLWIYVLHLD--I 360

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
           +   N  +   ++   L++++P++   +++++FS++GIPP+ GFF KL +F++ + +S Y
Sbjct: 361 DSTSNKSLVTFADAIGLARSNPLLGLVVVLMIFSLAGIPPLGGFFAKLNIFISLVDASFY 420

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNP 486
            + +F +  S ++ FYYIR+IKI YF+    W  + P+ K  A VL  + L + FF  +P
Sbjct: 421 LIAVFTVLTSVISAFYYIRLIKIFYFEKNENWFFFAPLSKGSAIVLVLTALTICFFICSP 480

Query: 487 NL 488
           NL
Sbjct: 481 NL 482

emb|CAC48183.1| NADH dehydrogenase subunit 2 [Fossombronia pusilla]
(417 aa)

Score: 272 bits (696), Expect: 2.64938e-70
Length: 430, Idn/Pos/Gap = 159/249/19 (36%/57%/4%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L +N G+L +++    IL + + +P  ++    +    +N   + +   LL    
Sbjct:   2 YDYPPLVRNVGWLGLLSVLITILLVAVGSPLAVANSVYNNLIIDNFTYFCQIFLLLSAAS  61

Query:  98 YVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIR 157
            + + +     E LN FE  +L + S  S+  +IS +D +++Y+++E+ +L FYV+A  +
Sbjct:  62 TMVMCLDYFKQESLNAFESIVLILFSTCSMLFMISAYDSIAMYLAIELQSLCFYVIAASK 121

Query: 158 RTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQ----SIMKEKSI 213
           R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TNF +L+  F     ++   +S 
Sbjct: 122 RDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQS- 180

Query: 214 LEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFIN 273
               + + +G++FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI+I    + 
Sbjct: 181 ----SGIFMGILFIAVGFLFKITAVPFHMWAPDVYEGSPTIVTASFSIAPKISILANMLR 236

Query: 274 LFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSI 333
           +F  S ++     Q+L    +  S+ LG   A AQ K KR LAYSSI HVG+++I  S  
Sbjct: 237 VFIYSFYD--PTRQQLFFFRSIASMILGALAAVAQNKVKRLLAYSSIGHVGYLLIGFSCG 294

Query: 334 NYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFS 393
              G  SL+    IY+L+ +   A +L+LR  R        +YI++   L+KT+PI+A +
Sbjct: 295 TIEGIQSLLIGTFIYVLMTVNASAIVLALRQNR-------FKYIADLGALAKTNPILAIT 347

Query: 394 ILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFD 453
           + I  FS +GIPP+AGF +K  +F        Y L +  +  S ++ FYYIR +KI+YFD
Sbjct: 348 LSITTFSYAGIPPLAGFCSKFYLFFAASGCGAYLLALIGVVTSVISRFYYIRFVKIMYFD 407

Query: 454 NCNVWLIYVP 463
               W++Y P
Sbjct: 408 TPKTWILYKP 417

ref|YP_007333340.1| NADH-quinone oxidoreductase subunit n [Rhizobium tropici CIAT 899]
gb|AGB70794.1| NADH-quinone oxidoreductase subunit n [Rhizobium tropici CIAT 899]
(480 aa)

Score: 272 bits (696), Expect: 2.71653e-70
Length: 450, Idn/Pos/Gap = 155/260/19 (34%/57%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           ++ +++ IPEL L +   +LL+ G+F  + +  G  +       L V    +I+F+    
Sbjct:   7 LASLHLSIPELILAVGALVLLMIGVF--SGERSGPTVTGLAIAVLAVAGL-WIIFVPGEG  63

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
             +   Y    F      +++K + L+  I  +FL I      +L+ FEF +L +L+ L 
Sbjct:  64 LAYGGAYLADGFS-----RFMKIVALVGSIVAMFLSIGQARELQLDRFEFPVLLLLATLG 118

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           I L+IS  DL+S+Y+SLE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++
Sbjct: 119 ILLMISAHDLISLYLSLELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMS 178

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G T+F  ++    +  + +S+      L+ GLVF+     FK+SA PFHMW+PD
Sbjct: 179 LVYGFTGHTSFDAIATALSA--ETRSL-----GLVFGLVFVLAGLAFKISAVPFHMWTPD 231

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  T +   F    K+    +   +  T+   +   WQ++ +  +  S+ LG+F A 
Sbjct: 232 VYEGAPTPVTAFFAAAPKVAAMAILTRIVVTAFHPVLADWQQIIVFISIASMLLGSFAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q  FKR +AYSSI H+G+ ++ +++    G   ++ YM+IY+++ LG FA ++++R   
Sbjct: 292 GQRNFKRLMAYSSIGHMGYALVGLAAGTKTGVSGVMLYMVIYMVMTLGSFAIIMAMRR-- 349

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             K   Q+  I +   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY
Sbjct: 350 --KDGRQVENIDDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFGKYFVFVAAIQAHLY 407

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           +L I  +  S +  +YY+R+IK+++FD   
Sbjct: 408 ALAIIGVLASVVGAYYYLRVIKVMWFDEAK 437

ref|NP_659273.1| NADH dehydrogenase subunit 2 [Laminaria digitata]
emb|CAC87969.1| NADH dehydrogenase subunit 2 [Laminaria digitata]
(496 aa)

Score: 272 bits (695), Expect: 3.37465e-70
Length: 485, Idn/Pos/Gap = 176/275/15 (36%/56%/3%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D   F+PEL+L +++ ++L++G F        Y  L+ +   L  I     L L++N P
Sbjct:   9 NDTAAFLPELFLAISILVVLLHGSFLGVFAASLYTYLTPSMVRLTSIILFLSLLLVLNNP  68

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
               T + + F  +N   W K I  L  +  V +  S +   +   +EFF+  I   LS+
Sbjct:  69 VESQTLWNAIFVTDNIGTWSKLIVFLGLLFCVSVSESYMFSARFRAYEFFVFIIGIGLSL 128

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS++DLLSIY+S+E L+LIFYVLA  ++ S FS EAGLKYFILG  ++   LFG +L
Sbjct: 129 CLLISSYDLLSIYLSMEFLSLIFYVLAAWKKNSYFSAEAGLKYFILGSVASIFFLFGASL 188

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTD---LLLGLVFISTAFFFKLSAAPFHMWS 244
           IY  +G TN   L+L  +          +PT    + LGLV + +A  FK+ AAP+HMW 
Sbjct: 189 IYFAMGTTNLGSLTLLTE---------NLPTSSPFIYLGLVCVVSALLFKIGAAPYHMWI 239

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTF 303
            DVYEG  T +  +F +  K   F +   L  TS +  F ++W+    IC  FSLF+G  
Sbjct: 240 ADVYEGAPTLVGFIFAVIPKFAFFVVIFRLSFTSFWSFFPSLWENFFCICGLFSLFIGCV 299

Query: 304 IAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR 363
               +TK KR LA+SS+ HVGF+ + ++S N  G  +++FY+ +Y+L    ++  +L L 
Sbjct: 300 CGLGETKIKRLLAFSSVGHVGFLCLGLASGNIEGIQAVLFYLSVYMLTAAFLWVYILHLD 359

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
              +   +  +   S+   L +++P++ F + +++FS++GIPP  GFF KL +F++ + S
Sbjct: 360 --LSSTSSSTLLTFSDSIGLVRSNPLMGFGVALMIFSLAGIPPFGGFFAKLNIFVSLVDS 417

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFC 483
           S Y L +F +  S ++ FYYIR+IKI YF+    W  + P+ K  A VL  S L + FF 
Sbjct: 418 SFYILAVFVVITSVISAFYYIRLIKIFYFEKNKNWFFFAPLSKGAAVVLVLSGLTIIFFM 477

Query: 484 LNPNL 488
            +PN+
Sbjct: 478 FSPNI 482

ref|ZP_11035622.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. CF142]
gb|EJJ26101.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. CF142]
(481 aa)

Score: 271 bits (694), Expect: 3.76129e-70
Length: 448, Idn/Pos/Gap = 148/258/18 (33%/57%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +Y+  PE+ L +   +LL+ G+F         P++S     ++ I+  +++F+  +   
Sbjct:   9 SLYLSAPEIILAIGALLLLMIGVFSGERSG---PLVSALAMIVIAISGLWLIFIPGDGLA  65

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
           +   Y    F      +++K + L+  +  +F+ + +    +L+ FEF +L +L  L I 
Sbjct:  66 YGGVYLADGF-----ARFMKVLALIGSLVALFMSMGHARENQLDKFEFPVLLVLCTLGIM 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+++Y+ LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLIALYLGLELQSLAIYVIAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++   Q++  E +       L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFAEVA---QALTVEGAR---SLGLIFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFLASAPKVAAMAMMTRIVITAFEPVLTDWQQVIVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVTGVMLYMAIYMVMTLGSFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  +S+   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVENVSDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            +  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AVIGVLASVVGAYYYLRVIKLMWFDEAT 438

ref|YP_006291809.1| nad2 gene product (mitochondrion) [Daucus carota subsp. sativus]
gb|AEY81209.1| NADH dehydrogenase subunit 2 (mitochondrion) [Daucus carota subsp. sativus]
(488 aa)

Score: 271 bits (694), Expect: 4.71167e-70
Length: 482, Idn/Pos/Gap = 167/266/27 (34%/55%/5%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PE+++    FILLI+G+ +ST+K Y YP L  N G+L +++    L L+      L+   
Sbjct:  10 PEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTI--  67

Query:  75 PSFFFFNNSLK------WIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            +  F+NN  +      + + + LL     + +   +   E+ +  E  +L  L   S+ 
Sbjct:  68 -AHLFWNNLFRRDNFTYFCQILLLLSTAGTISMCFDSSEQERFDASESIVLIPLPTRSML 126

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
            +IS +D +++Y+++E  +L FYV+A  +R SEFSTEAG KY ILG F +G+LLFG ++I
Sbjct: 127 FMISAYDSIAMYLAIEPQSLCFYVIAASKRKSEFSTEAGSKYLILGAFPSGILLFGCSMI 186

Query: 189 YGCIGITNFIDLS--LFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           YG  G T+F  L+  L    I   +S     + + +G++ I+    FK++A PF+MW+PD
Sbjct: 187 YGSTGATHFDQLAKILTGYEITGARS-----SGIFMGILSIAVGSLFKITAVPFYMWAPD 241

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVW-QKLTLICAFFSLFLGTFIA 305
           +YEG+ T +     I  KI+I     N+   S++  +    Q++   C+  S+ LG   A
Sbjct: 242 IYEGSPTPVTAFLSIAPKISIS---ANISRVSIYGSYGATLQQIFFFCSIASMILGALAA 298

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
            AQTK KR LA+SSI HVG+I    S     G  SL+  + IY  + +  FA + +LR  
Sbjct: 299 MAQTKVKRLLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYASMTIDAFAIVSALRQT 358

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R       ++YI++   L+KT+PI A +  I +FS +GIPP+AGF +K  +F   L    
Sbjct: 359 R-------VKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGA 411

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLN 485
           Y L    I  S +  FYYIR+ K ++FD    W++Y PMD+ K+ +L+ +   +T F   
Sbjct: 412 YFLAPVGIVTSVIGRFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPY 471

Query: 486 PN 487
           P+
Sbjct: 472 PS 473

ref|YP_767318.1| NADH dehydrogenase subunit N [Rhizobium leguminosarum bv. viciae 3841]
emb|CAK07209.1| putative NADH-quinone oxidoreductase chain N [Rhizobium leguminosarum bv. viciae 3841]
(481 aa)

Score: 271 bits (693), Expect: 4.95356e-70
Length: 448, Idn/Pos/Gap = 151/257/18 (33%/57%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++  PEL L +   +LL+ G+F  + +  G  +     G L+      +LF+      
Sbjct:   9 SLHLSAPELILAVGALVLLMVGVF--SGERSGLLVTGLAIGLLLASGLW-LLFVPAEGLA  65

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
           +   Y    F      +++K + L+  +  +F+ I +    +L+ FEF +L +L+ L I 
Sbjct:  66 YGGVYMADGFS-----RFMKLVALIGSLVAIFMSIGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFSEIAQAL-SVEGARSL-----GLIFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFLAAAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVTGVMLYMVIYMVMTLGTFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  + +   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVENVDDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

gb|ADU04592.1| NADH dehydrogenase subunit 2 (mitochondrion) [Mesostigma viride]
(497 aa)

Score: 271 bits (693), Expect: 6.0518e-70
Length: 473, Idn/Pos/Gap = 176/275/21 (37%/58%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           + D+  FIP+L+L + + ILL+ G   S    +   I +    +L   T    L L+  T
Sbjct:  11 VHDLVAFIPDLFLLVAILILLVVGSSISLKSVHEKTIWASTILWLSFWTLILTLVLMKET  70

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLL----VGICYVFLVISNISLEKLNVFEFFLLFIL 122
           P      F     FN++L      F+L    +G C + L +S ++  + + FEF LLF+L
Sbjct:  71 P------FSHAILFNHALLLDPLSFVLKVSILGTCLLLLSLS-VNKPESHSFEFPLLFLL 123

Query: 123 SILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLL 182
           S   + L+  ++DL+S+Y+S+E+ +  F++LA  RR SEFSTEAGLKYF+LG FS+GL L
Sbjct: 124 SAWGMGLMAESYDLISMYLSIELQSFCFFLLAASRRNSEFSTEAGLKYFLLGAFSSGLFL 183

Query: 183 FGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTD-LLLGLVFISTAFFFKLSAAPFH 241
           FG + IYG  G T+  +L+   +S+   +S+    ++ L++G++F+S  F FK  AAPFH
Sbjct: 184 FGSSFIYGFTGQTSLEELAKATESLFALESVYNNESNGLIIGILFLSAGFLFKSGAAPFH 243

Query: 242 MWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLG 301
           MW+PDVYEG+ T++  LF I  KI +F +F+  F   L  LF  WQ L    +  S+ +G
Sbjct: 244 MWTPDVYEGSPTTVTALFSILPKIALFGMFLRFFFQGLSSLFIQWQTLFFFSSLLSMIVG 303

Query: 302 TFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLS 361
              A +QTK KR  AYSSI HVG+ +I  +  N  G  SL+F + IYI++ L IF  LL+
Sbjct: 304 -ITAISQTKLKRLFAYSSIGHVGYFLIGFAVANPQGVQSLLFALGIYIVMTLHIFTFLLA 362

Query: 362 LRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCL 421
                        +Y ++ T  +K +P++A S+ +ILFS++G+PP+AGF +K  +F   L
Sbjct: 363 -------GAPENRKYCADLTSFAKINPVVALSLALILFSMAGMPPLAGFLSKFYLFRIAL 415

Query: 422 KSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVW-LIYVPMDKSKAFVLS 473
            S   SL I  +  S + ++YYIR+++I+YF     +  ++ P+ K  + +L 
Sbjct: 416 ASQFTSLAILGVITSVITSYYYIRLVRIMYFGKPLEYNTMFSPIPKQHSLILG 468

emb|CAC48190.1| NADH dehydrogenase subunit 2 [Lycopodium annotinum]
(417 aa)

Score: 271 bits (692), Expect: 6.52375e-70
Length: 429, Idn/Pos/Gap = 157/244/17 (36%/56%/3%)

Query:  39 YGYPILSKNFGYLVVIT-FTYILFLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGIC  97
           Y YP L +N G+L +++    IL +    P  ++  F +    +N   + +   LL    
Sbjct:   2 YDYPPLVRNVGWLGLLSVLITILLVAAGAPPTVANLFYNTLIKDNFTYFCQIFLLLRTAS  61

Query:  98 YVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIR 157
            + + + +   E LN FE  +L +LS  S+  +I   DL+++Y+++E+ +L FYV+A  +
Sbjct:  62 TIAMCLDHFKQESLNAFETIVLILLSTGSMLFMIPAHDLIAMYLAIELQSLCFYVIAASK 121

Query: 158 RTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQSIMKEKSIL--- 214
           R SEFSTEAGLKYFILG FS+G+LLFG ++IYG  G+TN  +L+     I+    I    
Sbjct: 122 RDSEFSTEAGLKYFILGAFSSGILLFGCSMIYGFTGVTNSEELA----KILTGYEITLFG 177

Query: 215 EIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINL 274
              + + +G+ FI+  F FK++A PFHMW+PDVYEG+ T +   F I  KI I    + +
Sbjct: 178 AHSSGIFMGIPFIAVGFLFKITAVPFHMWAPDVYEGSPTLVTAFFSIAPKIAILANMLRV 237

Query: 275 FGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSIN 334
           F  + ++    WQ L  + +  S+ LG   A AQ K KR  AYSSI HVG+  I  S   
Sbjct: 238 FIYTFYD--PTWQPLFFLRSIASMILGALAAMAQNKVKRLSAYSSIGHVGYPCIGFSCGT 295

Query: 335 YNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSI 394
             G  SL+  + IY+L+ +  FA++L+LR  R        +Y+++   L+KT+P +A ++
Sbjct: 296 IEGIQSLLIGIFIYVLMTINAFATVLALRQTR-------FKYLADLGALAKTNPTLAITL 348

Query: 395 LIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDN 454
            I +FS +GIPP+AG  +K  +F   L    Y L    +  S ++ FYYIR++KI+Y D 
Sbjct: 349 SITMFSYAGIPPLAGSRSKFYLFFAALGCGAYLLASVGVVTSVISCFYYIRLVKIMYSDT 408

Query: 455 CNVWLIYVP 463
              W++Y P
Sbjct: 409 PKTWILYKP 417

ref|ZP_18298454.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. viciae WSM1455]
gb|EJC70540.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. viciae WSM1455]
(481 aa)

Score: 271 bits (692), Expect: 7.03251e-70
Length: 448, Idn/Pos/Gap = 150/261/18 (33%/58%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++  PEL L +   +LL+ G+F  + +  G  +     G  +V+     L+L+    +
Sbjct:   9 SLHLSAPELILAVGALVLLMVGVF--SGERSGLLVT----GLAIVLLLASGLWLLFVPAE  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  +   +  +   +++K + L+  +  +F+ I +    +L+ FEF +L +L+ L I 
Sbjct:  63 GLA--YGGVYMADGFSRFMKLVALIGSLVAIFMSIGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFSEIAQAL-SVEGARSL-----GLIFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFLAAAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVTGVMLYMVIYMVMTLGTFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  + +   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVENVDDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

ref|ZP_18318152.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WSM2297]
gb|EJC78844.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WSM2297]
(481 aa)

Score: 271 bits (692), Expect: 7.45548e-70
Length: 448, Idn/Pos/Gap = 149/261/18 (33%/58%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++  PEL L +   +LL+ G+F  + +  G  +     G  +V+     L+L+    +
Sbjct:   9 SLHLSAPELILAVGALVLLMVGVF--SGERSGLVVT----GLAIVLLLAAGLWLLFVPAE  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  +   +  +   +++K + L+  +  +F+ + +    +L+ FEF +L +L+ L I 
Sbjct:  63 GLA--YGGVYMADGFSRFMKLVALIGSLVALFMTMGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFSEIAQAL-SVEGARSL-----GLIFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFLAAAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVSGVMLYMVIYMVMTLGTFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  + +   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVENVDDLAGLSATNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

ref|ZP_10733635.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. CF122]
gb|EJL57414.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. CF122]
(481 aa)

Score: 271 bits (692), Expect: 7.70851e-70
Length: 453, Idn/Pos/Gap = 150/253/24 (33%/55%/5%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           ++ +++ IPEL L +   +LL+ G+F                G +V +    +L      
Sbjct:   7 LASLHLSIPELILAVGALVLLMVGVFSGERS-----------GRMVSVLALIVLAAAALW  55

Query:  67 PDFLSTY---FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILS 123
             F+ +    +   F  +   +++K   L+  +  +F+ +      +L+ FEF +L +L 
Sbjct:  56 LIFVPSEGVAYGGVFLSDGFGRFMKITALVGSMVALFMSLGLAGENQLDKFEFPVLLVLC 115

Query: 124 ILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLF 183
            L I L+IS  DL+S+Y+ LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+
Sbjct: 116 TLGILLMISANDLISLYLGLELQSLAIYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLY 175

Query: 184 GIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMW 243
           G++L+YG  G T F  ++    ++   +S+      L+ GLVFI     FK+SA PFHMW
Sbjct: 176 GMSLVYGFTGHTQFAAIAQAL-TVDGARSL-----GLIFGLVFILAGIAFKISAVPFHMW 229

Query: 244 SPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTF 303
           +PDVYEG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F
Sbjct: 230 TPDVYEGAPTPVTAFLASAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSF 289

Query: 304 IAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR 363
            A  Q   KR +AYSSI H+G+ ++ ++S    G   ++ YM+IY+++ LG FA ++S+R
Sbjct: 290 AAIGQRNIKRLMAYSSIGHMGYALVGLASGTQTGVSGVMLYMVIYMVMTLGSFAIIMSMR 349

Query: 364 NFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKS 423
                K    +  +++   LS T+P +A  + I++FS++GIPP+AGFF K  VF+  +++
Sbjct: 350 R----KDGTVVEEVNDLAGLSTTNPFMATVLTILMFSLAGIPPLAGFFAKYFVFVAAIEA 405

Query: 424 SLYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
            LY+L I  I  S +  +YY+R+IK+++FD   
Sbjct: 406 KLYALAIIGILASVVGAYYYLRVIKLMWFDEAT 438

ref|YP_002280794.1| NADH dehydrogenase subunit N [Rhizobium leguminosarum bv. trifolii WSM2304]
ref|ZP_18337907.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WSM597]
gb|ACI54568.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WSM2304]
gb|EJB03240.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WSM597]
(481 aa)

Score: 271 bits (692), Expect: 7.70851e-70
Length: 448, Idn/Pos/Gap = 149/262/18 (33%/58%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++  PEL L +   +LL+ G+F  + +  G  +     G  +V+     L+L+    +
Sbjct:   9 SLHLSAPELILAVGALVLLMVGVF--SGERSGLVVT----GLAIVLLLAAGLWLLFVPAE  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  +   +  +   +++K + L+  +  +F+ + +    +L+ FEF +L +L+ L I 
Sbjct:  63 GLA--YGGVYMADGFSRFMKLVALIGSLVALFMTMGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFSEIAQAL-SVEGARSL-----GLIFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFLAAAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVSGVMLYMVIYMVMTLGTFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  +++   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVEEVNDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

ref|YP_002363209.1| proton-translocating NADH-quinone oxidoreductase subunit N [Methylocella silvestris BL2]
gb|ACK51847.1| proton-translocating NADH-quinone oxidoreductase, chain N [Methylocella silvestris BL2]
(477 aa)

Score: 270 bits (691), Expect: 1.00676e-69
Length: 479, Idn/Pos/Gap = 152/267/22 (31%/55%/4%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE+ L + V  L++YG      K    P+     G L       IL +++   +  +  
Sbjct:  12 LPEVILAVGVLGLVLYGAL--RGKASDGPVTEIAVGLL----GAAILIILLGFKE-QAIL  64

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           F      +   +++K + L+  +  + +    ++ E+++ FEF +L +L+ L + ++IS 
Sbjct:  65 FDGAVIDDGFGRFMKVLALIGSLTALVMGQDFLARERIDKFEFPILVLLATLGMMVLISA 124

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            + +++Y+ LE+++L  YVLA   R +  ++EAGLKYF+LG  S+G+LL+G +LIYG  G
Sbjct: 125 QNFIAMYLGLELMSLALYVLAAFNRDNLRASEAGLKYFVLGALSSGMLLYGASLIYGFAG 184

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
             +F  ++   Q          +   ++ GLVF+ T   FK+SA PFHMW+PDVYEG  T
Sbjct: 185 TVDFAGVAAATQG--------HVSIGIIFGLVFLMTGLAFKMSAVPFHMWTPDVYEGAPT 236

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F    K+    + + +  T+       W+++ +  +  S+ LG F A  QT  KR
Sbjct: 237 PVTAFFGSAVKMAAVAITVRVLMTAFPGAETQWRQIIVFISILSMALGAFAAIGQTNIKR 296

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYS+I HVGF ++ +++   +G + ++ YM IY+++ LG FA++LS+R        H 
Sbjct: 297 LMAYSAIGHVGFALVGLAAGTQDGVFGVMVYMAIYLVMTLGSFAAILSMR-----VAGHA 351

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
           +  IS+   L+KT+P++AF   +++FS++GIPP+AGFF K  VF   +++ LY L +  +
Sbjct: 352 VEQISDLAGLAKTNPLMAFFFAMLMFSLAGIPPLAGFFAKWYVFNAAIQAHLYPLAVIGV 411

Query: 434 TISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLIINS 492
             S +A +YY+R++KI+YFD       + P   +   VL+ + L + F    P L I++
Sbjct: 412 LSSAVAAYYYLRVVKIMYFDEPAP--AFDPPTPALRVVLAITSLFVLFLFAYPALFIDA 468

ref|ZP_14748812.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. CF080]
gb|EJL41524.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium sp. CF080]
(480 aa)

Score: 270 bits (690), Expect: 1.16991e-69
Length: 443, Idn/Pos/Gap = 144/251/19 (32%/56%/4%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE+ L +    LL+ G+F S +K    P ++   G  V +     L+LI    + ++  
Sbjct:  14 MPEIILAVGALALLMIGVF-SGDKSA--PTVT---GLAVALLAVAGLWLIFMPGEGVA--  65

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           +   F  +   +++K + L+  I  + + + +   ++LN FEF +L +LS L + L+IS 
Sbjct:  66 YGGAFKLDAFGRFMKVLALVGSITAMVMSVGHAKSDQLNRFEFPVLLVLSTLGMLLLISA 125

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            DL++ Y++LE+++L  YV+A   R S  STEAGLKYF+LG  S+G++L+G++L+YG  G
Sbjct: 126 NDLIAFYLALELMSLALYVIAAFNRDSLRSTEAGLKYFVLGALSSGMMLYGMSLVYGFTG 185

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
            T F       + I K  S       L+ G+VF+     FK+SA PFHMW+PDVYEG  T
Sbjct: 186 NTGF-------EGIAKVLSAETRGLGLIFGMVFVLAGACFKISAVPFHMWTPDVYEGAPT 238

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F    K+    + + +   +   L   W+++ +  +  S+ LG+F A  Q   KR
Sbjct: 239 PVTAFFAAGPKVAAMAILVRIVSDAFLPLVADWRQIIVFVSIASMLLGSFAAIGQRNIKR 298

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYSSI H+G+ ++ +++ +  G   ++ YM IY+++ LG FA ++++R     K    
Sbjct: 299 LMAYSSIGHMGYALVGLAAGSETGVSGVVLYMTIYMVMTLGTFACIMAMRR----KDGEN 354

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
           +  + +   L  T P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L +  +
Sbjct: 355 VENVDDLAGLFSTKPFMAVVLTALMFSMAGIPPLAGFFAKYFVFVAAIEAKLYALAVIGV 414

Query: 434 TISCLATFYYIRIIKIIYFDNCN 456
             S +  +YY+RI+K+++FD   
Sbjct: 415 LSSVVGAYYYLRIVKLMWFDEAK 437

ref|YP_003288911.1| NADH dehydrogenase subunit 2 [Saccharina japonica]
ref|YP_003288949.1| NADH dehydrogenase subunit 2 [Saccharina religiosa]
ref|YP_003288987.1| NADH dehydrogenase subunit 2 [Saccharina ochotensis]
ref|YP_003289064.1| NADH dehydrogenase subunit 2 [Saccharina diabolica]
ref|YP_003289115.1| NADH dehydrogenase subunit 2 [Saccharina longipedalis]
ref|YP_004599011.1| NADH dehydrogenase subunit 2 [Saccharina japonica x latissima]
dbj|BAI48497.1| NADH dehydrogenase subunit 2 [Saccharina japonica]
dbj|BAI48535.1| NADH dehydrogenase subunit 2 [Saccharina religiosa]
dbj|BAI48573.1| NADH dehydrogenase subunit 2 [Saccharina ochotensis]
dbj|BAI48611.1| NADH dehydrogenase subunit 2 [Saccharina diabolica]
dbj|BAI48649.1| NADH dehydrogenase subunit 2 [Saccharina longipedalis]
gb|AEH43380.1| NADH dehydrogenase subunit 2 [Saccharina japonica x latissima]
(496 aa)

Score: 270 bits (690), Expect: 1.17971e-69
Length: 482, Idn/Pos/Gap = 173/273/9 (35%/56%/1%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D   F+PEL+L + + ++L++G F   +    Y  L+ +   L        L L++N P
Sbjct:   9 NDTAAFLPELFLAIAILVVLLHGSFLGVSAASLYTYLTPSMVRLTSTILFVSLLLVLNNP  68

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
               T + S F  +N   W K I  L  I  V +  S +   +   +EFF+  I   LS+
Sbjct:  69 VESQTLWNSVFVTDNIGTWSKAIVFLGLIFCVAVSESYMFSARFRAYEFFVFVIGIGLSL 128

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS++DLLSIY+S+E L+LIFYVLA  ++ S FS EAGLKYFILG  ++   LFG +L
Sbjct: 129 CLLISSYDLLSIYLSMEFLSLIFYVLAAWKKNSYFSAEAGLKYFILGSVASIFFLFGASL 188

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           IY  +G TN   L+L  +++      +       LGL+ + +A  FK+ AAP+HMW  DV
Sbjct: 189 IYFSMGTTNLGSLTLLTENLTTSSPFIY------LGLICVVSALLFKIGAAPYHMWIADV 242

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIAF 306
           YEG  T +  +F +  K   F + + L  TS +  F ++W+    IC   SLF+G     
Sbjct: 243 YEGAPTLVGFIFAVIPKFAFFVVILRLSFTSFWSFFPSLWENFFCICGLLSLFIGCICGL 302

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            +TK KR LA+SS+ HVGF+ + ++S N  G  +++FY+ IY+L    ++  ++ L    
Sbjct: 303 GETKIKRLLAFSSVGHVGFLCLGLASGNIEGIQAVLFYLSIYMLTAAFLWVYIVHLD--L 360

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
           +      +   S+   L +++P++ F + +++FS++GIPP  GFF KL +F++ + SSLY
Sbjct: 361 SSTSGSTLLTFSDSIGLVRSNPLMGFGVALMIFSLAGIPPFGGFFAKLNIFVSLVDSSLY 420

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNP 486
            + IF +  S ++ FYYIR+IKI YF+    W  + P+ K  + VL  S   + FF L+P
Sbjct: 421 IVSIFVVITSVISAFYYIRLIKIFYFEKNKNWFFFTPLSKGASMVLVLSGFTIIFFMLSP 480

Query: 487 NL 488
           N+
Sbjct: 481 NI 482

ref|ZP_10180024.1| proton-translocating NADH-quinone oxidoreductase, chain N [Microvirga sp. WSM3557]
gb|EIM29663.1| proton-translocating NADH-quinone oxidoreductase, chain N [Microvirga sp. WSM3557]
(479 aa)

Score: 270 bits (690), Expect: 1.24027e-69
Length: 479, Idn/Pos/Gap = 157/266/22 (32%/55%/4%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE+ + + V +L+++G F      YG  I++     L+ +TF  +L L    P      
Sbjct:  14 LPEILMAVGVLVLVLFGAFRGERPGYGMSIIALA---LLAVTFVAVLML----PGERVET  66

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
               F  +   K++K + LL     + L +  +  E +  FE+ +L ILS + + ++IS 
Sbjct:  67 MAGSFVIDGFAKFMKALTLLASAGGIILSLDYMRREGIYRFEYPILIILSTIGMMMVISA 126

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            DL+++Y+ LE+L+L  YV+A   R +  STEAGLKYF+LG  S+G+LL+G +L+YG  G
Sbjct: 127 NDLIALYLGLELLSLSSYVIAAFDRDNARSTEAGLKYFVLGALSSGMLLYGASLVYGFAG 186

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
             +F  ++   Q          +    ++GLVF++    FK+SA PFHMW+PDVYEG+ T
Sbjct: 187 SVSFPVIATVLQG--------NVGIGAIVGLVFVTAGIAFKISAVPFHMWTPDVYEGSPT 238

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F    K+    +   +F      +   WQ++ +  +  S+ LG+F A  Q   KR
Sbjct: 239 PVTAFFAAAPKMAGMAMATRVFIDCFPGILVQWQQIIVFISIASMALGSFAAIGQRNLKR 298

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYSSI +VG+ +I +++    G   ++ YM IY+ + LG FA +L +R     + N  
Sbjct: 299 LMAYSSIGNVGYALIGLAAGTPEGIQGVVIYMAIYLAMTLGTFAVILGMR-----RGNVM 353

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
              I + + L++THP +AF + +++FS++GIPP+AGFF K  VF   ++++L +L +  +
Sbjct: 354 FESIDDLSGLARTHPALAFCLAMMMFSLAGIPPLAGFFAKFYVFAAAIQANLVALAVIGV 413

Query: 434 TISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLIINS 492
             S +  +YY+RI+K++YFD       +  M    +FVL+ S  ++  F L P  I+N+
Sbjct: 414 VTSVVGAYYYLRIVKVMYFDAPVER--FERMSPGVSFVLAVSSAVVLLFWLVPAPIVNA 470

ref|YP_006591839.1| NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I subunit N) [Methylocystis sp. SC2]
emb|CCJ07188.1| NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I subunit N) [Methylocystis sp. SC2]
(477 aa)

Score: 270 bits (689), Expect: 1.4778e-69
Length: 479, Idn/Pos/Gap = 147/265/22 (30%/55%/4%)

Query:  13 FIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLST  72
           F+PE  L + V  L++ G F       G+ ++ +    + ++    +   + +TPD  ++
Sbjct:  11 FLPETILAVGVMALILIGAFRGER---GFGLVDEM--AVAILGLALVAIALSSTPD--TS  63

Query:  73 YFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIS 132
            F   +  +   +++K + L+  I  + L +  +    L  FE+ +L +LS L + L+IS
Sbjct:  64 VFDGAYVDDGFSRFMKALTLVGAIASILLSVDWLQRNGLEKFEYPVLIMLSTLGMLLLIS 123

Query: 133 TFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCI 192
             +L+++Y+ LE+++L  YV+A   R    S+EAGLKYF+LG  S+G++L+G +L+YG  
Sbjct: 124 ADNLIALYLGLELMSLALYVMAAFARDDGRSSEAGLKYFVLGALSSGMMLYGASLLYGFA 183

Query: 193 GITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTL 252
           G  +F  ++    +          P  ++ GLVF+  A  FK+SAAPFHMW+PDVY+G  
Sbjct: 184 GTVSFAGIAAVVST--------SAPIGVIFGLVFVLAALAFKMSAAPFHMWTPDVYQGAP 235

Query: 253 TSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFK 312
           T +   F    K+    + + +  T+     + W+++ +  +  S+ LG+F A  Q   K
Sbjct: 236 TPVTAFFASAAKMAAVAITVRIVITAFPGAKDQWRQIIIFISIASMLLGSFAAIGQENIK 295

Query: 313 RFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNH 372
           R +AYSSI H+GF +I +++ +  G   +  Y+ IY+++ LG FA++L++R    Y  N 
Sbjct: 296 RLMAYSSIGHMGFALIGLAAGDEAGVRGVAIYLTIYLIMTLGTFAAILAMRVEGRYVEN- 354

Query: 373 QIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFA 432
               +S+   LS+T+  +AF + +++FS++G+PP+AGFF K  V L  + + L+ L +  
Sbjct: 355 ----VSDLAGLSRTNGWMAFFLAMLMFSLAGVPPLAGFFAKYYVLLAAVDAGLFGLAVVG 410

Query: 433 ITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLIIN 491
           +  S +A +YY+R++K++YFD         PM      VL  + L L  F + P  +++
Sbjct: 411 VLASAVAAYYYLRVVKVMYFDEPAPAFDRAPMALRA--VLGATTLALLGFWVYPTPVMD 467

ref|YP_673597.1| NADH dehydrogenase subunit N [Chelativorans sp. BNC1]
gb|ABG62432.1| NADH dehydrogenase subunit N [Chelativorans sp. BNC1]
(479 aa)

Score: 270 bits (689), Expect: 1.59304e-69
Length: 480, Idn/Pos/Gap = 163/265/26 (33%/55%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           S + +  PE+ L +   +LL+ G+F            +   G  V +    I ++++   
Sbjct:   7 SSLALAFPEVALAVGAMVLLMIGVFSGERAN------ATVTGLAVALFLAAIAWIVVFPA  60

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
           D     F   F  +   +++K + L+     + + +     EK + FE+ +L +LS L +
Sbjct:  61 D--GEAFGGAFISDPFSRFMKLLTLIGAAVTLVMSVGFAKAEKFDKFEYPVLIMLSTLGM 118

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS  D++S+Y+ LE+ +L  YV+A I R S  +TEAGLKYF+LG  S+G+LL+G++L
Sbjct: 119 LLMISANDMISLYLGLELQSLALYVVAAINRDSVRATEAGLKYFVLGALSSGMLLYGVSL 178

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           +YG  G T F  ++    S   E+ +      L+ GLVF+     FK+SA PFHMW+PDV
Sbjct: 179 VYGFTGNTGFEAIATALSS-GGERQL-----GLVFGLVFVLAGLAFKISAVPFHMWTPDV 232

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNV-WQKLTLICAFFSLFLGTFIAF 306
           YEG  T +   F    K+    L I +     FE   V WQ++ +  +  S+ LG+F A 
Sbjct: 233 YEGAPTPVTAFFAAAPKMAAIALLIRVT-MQAFEPIAVDWQQIVVFISIASMLLGSFAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q   KR +AYSSI H+GF ++ +++ +  G   +I YM+IY+ + LG FA +L++R  R
Sbjct: 292 GQRNIKRLMAYSSIGHMGFALVGLAANSEAGVRGVIIYMLIYLAMTLGTFAFILAMR--R 349

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
           N   +  +  I +   L+ T+P++A  + I++FS++GIPP+AGF+ K  VFL  + + L 
Sbjct: 350 N---DTNVEQIDDLAGLASTNPMMATIMTILMFSMAGIPPLAGFWAKWYVFLAAINAGLV 406

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFS---VLLLTFFC 483
           +L +  +  S +A +YY+RIIK+++FD       + PM      VL+ S   VLL  FF 
Sbjct: 407 ALAVIGVLASVVAAYYYLRIIKVMWFDESVG--AFQPMAGELRLVLTLSGAFVLLYVFFG 464

ref|YP_001977842.1| NADH dehydrogenase subunit N [Rhizobium etli CIAT 652]
gb|ACE90664.1| NADH-ubiquinone oxidoreductase protein, chain N [Rhizobium etli CIAT 652]
(481 aa)

Score: 270 bits (689), Expect: 1.63342e-69
Length: 448, Idn/Pos/Gap = 149/261/18 (33%/58%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++ +PEL L +   +LL+ G+F  + +  G  +     G  +V+     L+L+    +
Sbjct:   9 SLHLSVPELILAVGALVLLMVGVF--SGERSGLVVT----GLAIVLLLAPALWLLFVPAE  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  +   +  +   +++K + L+  +  +F+ + +    +L+ FEF +L +L+ L I 
Sbjct:  63 GLA--YGGVYMADGFSRFMKLVALIGSLVALFMTMGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFAEIAQAL-SVEGARSL-----GLVFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFLAAAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 RNIKRLMAYSSIGHMGYALVGLAAGNQTGVSGVMLYMVIYMVMTLGTFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  + +   LS T+P +A  +  ++FS++GIPP+AGFF K  VF   +++ LY+L
Sbjct: 351 KDGTVVEDVYDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFFAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

ref|ZP_18304703.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WU95]
gb|EIW42166.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WU95]
(481 aa)

Score: 270 bits (689), Expect: 1.64711e-69
Length: 448, Idn/Pos/Gap = 150/262/18 (33%/58%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++  PEL L +   +LL+ G+F  + +  G  +     G  +V+     L+L+    +
Sbjct:   9 SLHLSAPELILAVGALVLLMVGVF--SGERSGLLVT----GLAIVLLLASGLWLLFVPAE  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  +   +  +   +++K + L+  +  +F+ I +    +L+ FEF +L +L+ L I 
Sbjct:  63 GLA--YGGVYMADGFSRFMKLVALIGSLVAIFMSIGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLSLYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFSEIAQAL-SVEGARSL-----GLIFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFLAAAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVTGVMLYMVIYMVMTLGSFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  +++   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVEEVNDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

ref|ZP_10832974.1| NADH:ubiquinone oxidoreductase subunit N [Rhizobium sp. CCGE 510]
gb|EJT07128.1| NADH:ubiquinone oxidoreductase subunit N [Rhizobium sp. CCGE 510]
(481 aa)

Score: 269 bits (688), Expect: 2.02914e-69
Length: 448, Idn/Pos/Gap = 149/259/18 (33%/57%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++  PEL L +   +LL+ G+F  + +  G  +     G  +V+     L+L+    +
Sbjct:   9 SLHLSAPELILAVGALVLLMVGVF--SGERSGLVVT----GLAIVLLLAAGLWLLFVPAE  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  +   +  +   +++K + L+  +  +F+   +    +L+ FEF +L +L+ L I 
Sbjct:  63 GLA--YGGVYMADGFSRFMKLVALIGSLVALFMTTGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFSEIAQAL-SVEGARSL-----GLIFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG F A  Q
Sbjct: 235 EGAPTPVTAFLAAAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGAFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVSGVMLYMVIYMVMTLGTFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  + +   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVENVDDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

ref|ZP_01547428.1| NADH dehydrogenase subunit N [Stappia aggregata IAM 12614]
gb|EAV44158.1| NADH dehydrogenase subunit N [Stappia aggregata IAM 12614]
(473 aa)

Score: 269 bits (688), Expect: 2.11559e-69
Length: 487, Idn/Pos/Gap = 156/266/24 (32%/54%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           + D+   +PE+ L L   +LL+ G F    K   Y +     G L+  TF  +LF+    
Sbjct:   1 MPDLKPVLPEIILALGAMVLLMIGAF--GGKRVSYAVFGGAMG-LLGGTFLVLLFV----  53

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICY-VFLVISNISLEKLNVFEFFLLFILSIL 125
           P F  T+  SF    +   ++  + +L G  + + +  +    +  + FE+ +L +L+ L
Sbjct:  54 PAFGETFGGSFIL--DDFAYLLKLLVLAGSFFAIAMSWAYAKSQSFDHFEYPILIVLATL 111

Query: 126 SIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGI 185
            + L++S  D++++Y+ LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G+
Sbjct: 112 GMMLMLSANDMIALYLGLELQSLALYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGM 171

Query: 186 ALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +L+YG  G        + F  I +  S       L++GL FI     FK+SA PFHMW+P
Sbjct: 172 SLVYGFSG-------QIAFDGIAEALSHDGASIGLVIGLTFILAGLAFKISAVPFHMWTP 224

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIA 305
           DVYEG  T +        K+    + + +   +   + N WQ++ +  +  S+ LG F A
Sbjct: 225 DVYEGAPTPVTAFLAAAPKVAAMGMLVRIVIEAFQPVTNDWQQIIVFVSIASMVLGAFAA 284

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
             Q   KR +AYSSI H+G+ ++ +++    G   +IFYM+ Y+ + LG+FA +LS+R  
Sbjct: 285 IGQHNLKRLMAYSSIGHMGYALVGLAAGTQTGVEGVIFYMIAYMGMTLGVFACILSMR-- 342

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
              + +  +  +S+   LS+T+  +A  + +++FS++GIPP+ GFF K  VF   +++ L
Sbjct: 343 ---RKDGMVEEVSDLAGLSQTNLPMAILLGLLMFSLAGIPPLVGFFGKWYVFSAAVEAGL 399

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLN 485
           + L +  +  S +  +YY+RI+K+++FD        +PM+     VL  S L + FF L 
Sbjct: 400 FPLAVIGVVASVVGAYYYLRIVKVMFFDEPVEGFEAMPMELR--VVLGLSSLFVIFFWLA 457

Query: 486 PNLIINS 492
           P  I+ +
Sbjct: 458 PGQIVGA 464

ref|YP_003288822.1| NADH dehydrogenase subunit 2 [Saccharina angustata]
dbj|BAI48687.1| NADH dehydrogenase subunit 2 [Saccharina angustata]
(496 aa)

Score: 269 bits (687), Expect: 3.05402e-69
Length: 482, Idn/Pos/Gap = 172/274/9 (35%/56%/1%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D   F+PEL+L +++ ++L++G F   +    Y  L+ +   L        L L++N P
Sbjct:   9 NDTAAFLPELFLAISILVVLLHGSFLGASAASLYTYLTPSMVRLTSTILFVSLLLVLNNP  68

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
               T + + F  +N   W K I  L  I  V +  S +   +   +EFF+  I   LS+
Sbjct:  69 VESQTLWNAIFVTDNIGTWSKAIVFLGLIFCVSISESYMFSARFRAYEFFVFVIGIGLSL 128

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            L+IS++DLLSIY+S+E L+LIFYVLA  ++ S FS EAGLKYFILG  ++   LFG +L
Sbjct: 129 CLLISSYDLLSIYLSMEFLSLIFYVLAAWKKNSYFSAEAGLKYFILGSVASIFFLFGASL 188

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           IY  +G T+   L+L  +++            + LGLV + +A  FK+ AAP+HMW  DV
Sbjct: 189 IYFSMGTTSLGSLTLLTENLTTSSPF------IYLGLVCVVSALLFKIGAAPYHMWIADV 242

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIAF 306
           YEG  T +  +F +  K   F + + L  TS +  F ++W+    IC   SLF+G     
Sbjct: 243 YEGAPTLVGFIFAVIPKFAFFVVILRLSFTSFWSFFPSLWENFFCICGLLSLFIGCVCGL 302

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            +TK KR LA+SS+ HVGF+ + ++S N  G  +++FY+ IY+L    ++  ++ L    
Sbjct: 303 GETKIKRLLAFSSVGHVGFLCLGLASGNIEGIQAVLFYLSIYMLTAAFLWVYIVHLD--L 360

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
           +      +   S+   L +++P++ F + +++FS++GIPP  GFF KL +F++ + SS Y
Sbjct: 361 SSTSGSTLLTFSDSIGLVRSNPLMGFGVALMIFSLAGIPPFGGFFAKLNIFVSLVDSSFY 420

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNP 486
            + IF +  S ++ FYYIR+IKI YF+    W  + P+ K  + VL  S L + FF L+P
Sbjct: 421 IVAIFVVITSVISAFYYIRLIKIFYFEKNKNWFFFTPLSKGASIVLVLSGLTIIFFMLSP 480

Query: 487 NL 488
           N+
Sbjct: 481 NI 482

ref|ZP_11963784.1| NADH-ubiquinone oxidoreductase protein, chain N [Rhizobium etli CNPAF512]
gb|EGE55715.1| NADH-ubiquinone oxidoreductase protein, chain N [Rhizobium etli CNPAF512]
(481 aa)

Score: 268 bits (686), Expect: 3.26483e-69
Length: 448, Idn/Pos/Gap = 149/261/18 (33%/58%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++  PEL L +   +LL+ G+F  + +  G  +     G  +V+     L+L+    +
Sbjct:   9 SLHLSAPELILAVGALVLLMVGVF--SGERSGLVVT----GLAIVLLLASGLWLLFVPAE  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  +   +  +   +++K + L+  +  +F+ + +    +L+ FEF +L +L+ L I 
Sbjct:  63 GLA--YGGVYMADGFSRFMKLVALIGSLVALFMTMGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFAEIAQAL-SVEGARSL-----GLVFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFLAAAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVSGVMLYMVIYMVMTLGSFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  + +   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVEDVYDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

ref|ZP_18314434.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WSM2012]
gb|EJC73098.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhizobium leguminosarum bv. trifolii WSM2012]
(481 aa)

Score: 268 bits (686), Expect: 3.54893e-69
Length: 448, Idn/Pos/Gap = 148/260/18 (33%/58%/4%)

Query:   9 DIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPD  68
            +++  PEL L +   +LL+ G+F  + +  G  +     G  +V+     L+L+    +
Sbjct:   9 SLHLSAPELILAVGALVLLMVGVF--SGERSGLVVT----GLAIVLLLAAGLWLLFVPAE  62

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIF 128
            L+  +   +  +   +++K + L+  +  + + + +    +L+ FEF +L +L+ L I 
Sbjct:  63 GLA--YGGVYMADGFSRFMKLVALIGSLVALVMTMGHARENQLDKFEFPVLLVLATLGIL 120

Query: 129 LIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALI 188
           L+IS  DL+S+Y++LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+
Sbjct: 121 LMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLLYGMSLV 180

Query: 189 YGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVY 248
           YG  G T+F +++    S+   +S+      L+ GLVFI     FK+SA PFHMW+PDVY
Sbjct: 181 YGFTGHTHFSEIAQAL-SVEGARSL-----GLIFGLVFILAGIAFKISAVPFHMWTPDVY 234

Query: 249 EGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQ 308
           EG  T +        K+    +   +  T+   +   WQ++ +  +  S+ LG+F A  Q
Sbjct: 235 EGAPTPVTAFLAAAPKVAAMAMMTRIVITAFQPVLADWQQVVVFISIASMLLGSFAAIGQ 294

Query: 309 TKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNY 368
              KR +AYSSI H+G+ ++ +++ N  G   ++ YM+IY+++ LG FA ++S+R     
Sbjct: 295 KNIKRLMAYSSIGHMGYALVGLAAGNQTGVSGVMLYMVIYMVMTLGTFAIIMSMRR---- 350

Query: 369 KFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSL 428
           K    +  + +   LS T+P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY+L
Sbjct: 351 KDGTVVENVDDLAGLSTTNPFMAVVLTALMFSLAGIPPLAGFFAKYFVFVAAIEAKLYAL 410

Query: 429 VIFAITISCLATFYYIRIIKIIYFDNCN 456
            I  +  S +  +YY+R+IK+++FD   
Sbjct: 411 AIIGVLASVVGAYYYLRVIKLMWFDEAT 438

ref|ZP_01225742.1| NADH dehydrogenase I, N subunit [Aurantimonas manganoxydans SI85-9A1]
gb|EAS51153.1| NADH dehydrogenase I, N subunit [Aurantimonas manganoxydans SI85-9A1]
(477 aa)

Score: 268 bits (686), Expect: 3.92266e-69
Length: 471, Idn/Pos/Gap = 162/262/23 (34%/55%/4%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           S + I  PEL L +   ILL+ G+F           LS     L++I   +++F+   TP
Sbjct:   4 SSLPIIGPELILAVGSMILLMIGVFLGEKSAQTVTGLSVA---LIIIAGLWMVFV---TP  57

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
                 F   F  +    ++K + L+     V + +     E+ N FEF +L +LS   +
Sbjct:  58 --YGVAFGGSFVLDPFAGFMKVLVLIGAAAAVIMSVGYAESERFNRFEFPVLVLLSTTGM 115

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            +++S+ D++++Y+ LE+ +L  YVLA I R S  STEAGLKYF+LG  S+G+LL+G +L
Sbjct: 116 MVMVSSGDMIALYLGLELQSLSIYVLAAINRDSVRSTEAGLKYFVLGALSSGMLLYGASL 175

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           +YG  G   +  ++    +   E+SI      +++GLVFI     FK+SA PFHMW+PDV
Sbjct: 176 VYGFTGQIEYTAIAEVVAT--SERSI-----GIVVGLVFILCGLAFKISAVPFHMWTPDV 228

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNV-WQKLTLICAFFSLFLGTFIAF 306
           YEG  T I        K+    L I  F    FE   V WQ++ +  +  S+ LG F A 
Sbjct: 229 YEGAPTPITAFLAGAPKVAAIAL-ITRFTVQGFEPLAVDWQQVIIFISIASMALGAFAAI 287

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q   KR +AYSSI H+GF ++ +++ N++G   ++ YM IY+ + LG FA +L++R   
Sbjct: 288 GQRNIKRLMAYSSIGHMGFALVGLAAANFSGVRGVLLYMAIYLAMTLGTFAVILAMR--- 344

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             + +  +  I +   LSKT+P++A  + +++ S++G+PP+AGFF K  VF+  +++ LY
Sbjct: 345 --RKDGVVEEIDDLAGLSKTNPVMALMLTMLMLSLAGLPPLAGFFAKYFVFMAAVQAGLY 402

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVL 477
            L +  +  S +  FYY+RI+K+++FD+      +VPM      VL  + L
Sbjct: 403 GLAVIGVLASVVGLFYYLRIVKVMWFDD-QPSSEFVPMATELRVVLGAAAL 452

ref|YP_001771179.1| proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium sp. 4-46]
gb|ACA18745.1| proton-translocating NADH-quinone oxidoreductase, chain N [Methylobacterium sp. 4-46]
(482 aa)

Score: 268 bits (686), Expect: 3.98867e-69
Length: 383, Idn/Pos/Gap = 135/224/14 (35%/58%/3%)

Query: 110 KLNVFEFFLLFILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLK 169
           ++  FE+ +L +LS + + ++ S  DL+ +Y+ LE+ +L  YV+A+  R    STEAGLK
Sbjct: 105 RIARFEYPILIVLSSIGMLIMASANDLIGLYLGLELQSLAAYVIASFHRDDVRSTEAGLK 164

Query: 170 YFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFIST 229
           YF+LG  S+G+LL+G +L+YG  G       S+ F  I+      ++   L+LG+VF++ 
Sbjct: 165 YFVLGALSSGMLLYGASLVYGFTG-------SVSFPGIVTALRETQVNLGLVLGIVFVAA 217

Query: 230 AFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKL 289
              FKL+A PFHMW+PDVYEG  T +   F    K+    + + +F  +   +   W+++
Sbjct: 218 GVAFKLAAVPFHMWTPDVYEGAPTPVTAFFASAPKMAAMAMTVRVFVGAFPGVVEEWRQI 277

Query: 290 TLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYI 349
            +  A  S+ LG+F A  Q   KR +AYSSI +VG+ +I +++    G   ++ YM IY+
Sbjct: 278 MVFIAIASMLLGSFAAIGQRNLKRLMAYSSIGNVGYALIGLAAGTEEGVRGVVIYMAIYL 337

Query: 350 LINLGIFASLLSLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAG 409
            + LG FA +L+LR     + N     I + + LS+THP +AF + +++FS++GIPP+AG
Sbjct: 338 AMTLGAFAIILALR-----RGNRMFDTIDDLSGLSRTHPWLAFCLAMMMFSLAGIPPLAG 392

Query: 410 FFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKA 469
           FF K  VF   +K+ L +L +  +  S +  +YY+RI+K++YFD       Y PM     
Sbjct: 393 FFAKFYVFAAAIKAGLVTLAVIGVVTSVVGAYYYLRIVKVMYFDEPQE--SYEPMAPGLR 450

Query: 470 FVLSFSVLLLTFFCLNPNLIINS 492
            VL+ S +++  F + P  ++ +
Sbjct: 451 IVLAASSVVVILFWIVPAPLVAA 473

ref|YP_001754724.1| proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium radiotolerans JCM 2831]
gb|ACB24041.1| proton-translocating NADH-quinone oxidoreductase, chain N [Methylobacterium radiotolerans JCM 2831]
(481 aa)

Score: 268 bits (686), Expect: 4.02209e-69
Length: 442, Idn/Pos/Gap = 148/254/21 (33%/57%/4%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PEL L + V +L++YG +            ++      ++     L ++I+ P      
Sbjct:  15 LPELILGVGVMVLILYGAWRGDRS-------AETVSVGALVLLLVALSVVISQPVHGRVT  67

Query:  74 FPSFFFFNNSL-KWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIS 132
             S  F +++  K +K++ LL     + L       E+++ FEF +L +L  + + +++S
Sbjct:  68 TLSGAFVSDAFSKVMKSLVLLGSSATILLAHDFFKRERIDRFEFPVLIVLCTIGMMVMVS 127

Query: 133 TFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCI 192
             DL+++Y+ LE+ +L  YV+A   R    STEAGLKYF+LG  S+G+LL+G +L+YG  
Sbjct: 128 ANDLIALYLGLELQSLAAYVIAAFHRDDVKSTEAGLKYFVLGALSSGMLLYGASLVYGFT 187

Query: 193 GITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTL 252
           G  +F  +     S + E +   I    +LG+VF++    FKL+A PFHMW+PDVYEG+ 
Sbjct: 188 GTVSFPGI----VSALNENAGFGI----VLGIVFLAAGVCFKLAAVPFHMWTPDVYEGSP 239

Query: 253 TSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFK 312
           T +   F    K+    + + +F  ++ ++  +WQ++ +  +  S+ LG+F A  QT  K
Sbjct: 240 TPVTAFFASAPKMAAVAMTVRVFIGAMPDVTAIWQQIFIFVSVVSMALGSFAAIGQTSIK 299

Query: 313 RFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNH 372
           R +AYSSI ++G+ +I ++  +  G   L+ YM+IY+ + LG FA +LSLR  R+  F  
Sbjct: 300 RLMAYSSIANIGYALIGLACGSEEGISGLVTYMIIYLAMTLGTFAIILSLRR-RDVMFEK 358

Query: 373 QIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFA 432
               I + + LS+THP +AF +  ++FS++GIPP+AGFF K  VF   +K+ L +L +  
Sbjct: 359 ----IEDLSGLSRTHPWLAFCLAAMMFSLAGIPPLAGFFAKFYVFAAAIKAGLVTLAVIG 414

Query: 433 ITISCLATFYYIRIIKIIYFDN 454
           +  S +  +YY+R+++I+YFD 
Sbjct: 415 VVTSVVGAYYYLRVVRIMYFDE 436

ref|NP_540062.1| NADH dehydrogenase subunit N [Brucella melitensis bv. 1 str. 16M]
ref|ZP_05834334.1| NADH dehydrogenase subunit N [Brucella melitensis bv. 1 str. 16M]
ref|ZP_06103475.1| proton-translocating NADH-quinone oxidoreductase [Brucella melitensis bv. 1 str. Rev.1]
ref|ZP_06107313.1| proton-translocating NADH-quinone oxidoreductase [Brucella melitensis bv. 3 str. Ether]
gb|AAL52326.1| NADH-quinone oxidoreductase chain n [Brucella melitensis bv. 1 str. 16M]
gb|EEW88956.1| NADH dehydrogenase subunit N [Brucella melitensis bv. 1 str. 16M]
gb|EEZ11658.1| proton-translocating NADH-quinone oxidoreductase [Brucella melitensis bv. 3 str. Ether]
gb|EEZ14277.1| proton-translocating NADH-quinone oxidoreductase [Brucella melitensis bv. 1 str. Rev.1]
(478 aa)

Score: 268 bits (685), Expect: 4.29973e-69
Length: 403, Idn/Pos/Gap = 144/228/14 (35%/56%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
            T F   F  +   +++K + LL  I  + + +     EK + FEF +L +++ L + L+
Sbjct:  62 GTVFGGAFVIDGFSRFMKVLTLLGSIVALIMSVGFAKAEKFDKFEFPVLIVIATLGMLLM 121

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           +S   +L++Y+ LE+ +L  YVLA   R S  STEAGLKYF+LG  S+G+LL+GI+L+YG
Sbjct: 122 VSANSMLTLYLGLELQSLALYVLAAFNRDSVRSTEAGLKYFVLGSLSSGMLLYGISLVYG 181

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G   F++++       +E         L+ GL+FI     FK+SA PFHMW+PDVYEG
Sbjct: 182 YTGHIGFVEIAQAVSGGQRE-------LGLVFGLIFILAGLVFKISAVPFHMWTPDVYEG 234

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
             T +   F    K+    L I +   +   + + WQ++ +  A  S+ LG F A  Q  
Sbjct: 235 APTPVTAFFAGAPKMAAMALIIRVVTEAFAPVTHDWQQVIIFVALASMVLGAFAAIGQRN 294

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI+H+G+ ++ +++    G   ++ YM IY+ + LG FA +L++R       
Sbjct: 295 VKRLMAYSSISHMGYALVGLAAGTVIGVKGVMIYMAIYLAMTLGSFAFILAMRT-----K 349

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +  +  I +   LS+T+P++A  + I LFS++GIPP+AGFF K   FL  +++ LY L I
Sbjct: 350 DGNVENIDDLAGLSRTNPVLATVMTIFLFSLAGIPPLAGFFGKWYTFLAAVEAGLYPLAI 409

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             I  S +  FYY+R+IKI++FD       +VP+      VL 
Sbjct: 410 IGIVASVVGAFYYLRMIKIMWFDEPAAG--FVPVAGELRLVLG 450

ref|YP_221557.1| NADH dehydrogenase subunit N [Brucella abortus bv. 1 str. 9-941]
ref|YP_414266.1| NADH dehydrogenase subunit N [Brucella melitensis biovar Abortus 2308]
ref|YP_001934777.1| NADH dehydrogenase subunit N [Brucella abortus S19]
ref|ZP_04594249.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus str. 2308 A]
ref|ZP_05821227.1| NADH dehydrogenase subunit N [Brucella abortus NCTC 8038]
ref|ZP_05866917.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus bv. 6 str. 870]
ref|ZP_05870138.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus bv. 4 str. 292]
ref|ZP_05873958.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus bv. 2 str. 86/8/59]
ref|ZP_05895210.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus bv. 9 str. C68]
ref|ZP_05928100.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus bv. 3 str. Tulya]
ref|ZP_06931887.1| NADH dehydrogenase I subunit N [Brucella abortus bv. 5 str. B3196]
ref|ZP_17153763.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI435a]
ref|ZP_17157239.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI474]
ref|ZP_17160026.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI486]
ref|ZP_17164005.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI488]
ref|ZP_17166636.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI010]
ref|ZP_17169764.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI016]
ref|ZP_17172545.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI021]
ref|ZP_17175681.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI259]
gb|AAX74196.1| NuoN, NADH dehydrogenase I, N subunit [Brucella abortus bv. 1 str. 9-941]
emb|CAJ10791.1| NADH/Ubiquinone/plastoquinone (complex I):NADH-ubiquinone oxidoreductase, chain 5:NADH-ubiquinone oxidoreductase, chain 2 [Brucella melitensis biovar Abortus 2308]
gb|ACD72303.1| NADH dehydrogenase subunit N [Brucella abortus S19]
gb|EEP64298.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus str. 2308 A]
gb|EEW80768.1| NADH dehydrogenase subunit N [Brucella abortus NCTC 8038]
gb|EEX55048.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus bv. 4 str. 292]
gb|EEX58868.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus bv. 2 str. 86/8/59]
gb|EEX61498.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus bv. 6 str. 870]
gb|EEX80193.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus bv. 9 str. C68]
gb|EEX82287.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus bv. 3 str. Tulya]
gb|EFH34685.1| NADH dehydrogenase I subunit N [Brucella abortus bv. 5 str. B3196]
gb|EHR12112.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI474]
gb|EHR13438.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI435a]
gb|EHR14171.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI486]
gb|EHR21282.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI010]
gb|EHR21798.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI016]
gb|EHR22079.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI488]
gb|EHR30122.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI259]
gb|EHR30707.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella abortus bv. 1 str. NI021]
(478 aa)

Score: 268 bits (685), Expect: 4.79235e-69
Length: 403, Idn/Pos/Gap = 144/228/14 (35%/56%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
            T F   F  +   +++K + LL  I  + + +     EK + FEF +L +++ L + L+
Sbjct:  62 GTVFGGAFVIDGFSRFMKVLTLLGSIVALIMSVGFAKAEKFDKFEFPVLIVIATLGMLLM 121

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           +S   +L++Y+ LE+ +L  YVLA   R S  STEAGLKYF+LG  S+G+LL+GI+L+YG
Sbjct: 122 VSANSMLTLYLGLELQSLALYVLAAFNRDSVRSTEAGLKYFVLGSLSSGMLLYGISLVYG 181

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G   F++++       +E         L+ GL+FI     FK+SA PFHMW+PDVYEG
Sbjct: 182 YTGHIGFVEIAQAVSGGQRE-------LGLVFGLIFILAGLVFKISAVPFHMWTPDVYEG 234

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
             T +   F    K+    L I +   +   + + WQ++ +  A  S+ LG F A  Q  
Sbjct: 235 APTPVTAFFAGAPKMAAMALIIRVVTEAFAPVTHDWQQVIIFVALASMVLGAFAAIGQRN 294

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI+H+G+ ++ +++    G   ++ YM IY+ + LG FA +L++R       
Sbjct: 295 VKRLMAYSSISHMGYALVGLAAGTVIGVKGVMIYMAIYLAMTLGSFAFILAMRT-----K 349

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +  +  I +   LS+T+P++A  + I LFS++GIPP+AGFF K   FL  +++ LY L I
Sbjct: 350 DGNVENIDDLAGLSRTNPVLATVMTIFLFSLAGIPPLAGFFGKWYTFLAAVEAGLYPLAI 409

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             I  S +  FYY+R+IKI++FD       +VP+      VL 
Sbjct: 410 IGIVASVVGAFYYLRMIKIMWFDEPAAG--FVPVAGELRLVLG 450

ref|YP_004676670.1| NADH-quinone oxidoreductase subunit N [Hyphomicrobium sp. MC1]
emb|CCB66102.1| NADH-quinone oxidoreductase chain N (NADH dehydrogenase I, chain N) [Hyphomicrobium sp. MC1]
(487 aa)

Score: 268 bits (685), Expect: 5.03837e-69
Length: 483, Idn/Pos/Gap = 153/264/22 (31%/54%/4%)

Query:   4 IINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLI  63
           +I+ + + + +PEL L L    LL+ G+F    +  G  +     G LVV+       + 
Sbjct:   1 MIDSTVLQVVLPELILALGAIALLMVGVFMKNGEAAGRVVSWLAIGLLVVVA------IA  54

Query:  64 INTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILS 123
           +      +T F   F  ++  +++K + L+     + +   N +  KL +FE+ +L +L+
Sbjct:  55 VFEQGGSATVFNGAFVSDSFTRFLKIVILVGAALTLLMTFDNFTRAKLLLFEYPVLVLLA 114

Query: 124 ILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLF 183
            L + +++S  DL+++Y+ LE+ +L  YV+A   R    S+EAGLKYF+LG  S+G+LL+
Sbjct: 115 TLGMLMMVSANDLIALYLGLELQSLALYVVAAFNRDDVRSSEAGLKYFVLGALSSGMLLY 174

Query: 184 GIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLL--GLVFISTAFFFKLSAAPFH 241
           G +++YG  G T++        SI     + E+ T++ L  GLVF+     FK++A PFH
Sbjct: 175 GASILYGVTGSTSY-------ASIASAAGLPEMATNVGLTFGLVFVLVGIAFKIAAVPFH 227

Query: 242 MWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLG 301
           MW+PDVY+G+ T +   F    KI    L +     ++      WQ++ +  +  S+ LG
Sbjct: 228 MWTPDVYQGSPTPVTAFFAGAPKIAAMALLLRFTQAAMPAAAPQWQQIVIFLSIASMALG 287

Query: 302 TFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLS 361
            F A  QT  KR LAYSSI HVGF ++ +++ +  G   ++ Y+ IY+ + LG FA +LS
Sbjct: 288 AFAAIGQTNIKRLLAYSSIGHVGFSLVGLAANSPEGTSGVLIYLAIYVAMTLGAFACVLS 347

Query: 362 LRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCL 421
           +R    Y     +  IS+   L+++    A  + I++FS +GIPP+AGF+ K  VFL  +
Sbjct: 348 MRRGDRY-----VESISDLAGLARSDLTFATILAILMFSFAGIPPLAGFWAKWYVFLPAI 402

Query: 422 KSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTF 481
           K+ LY L +  +  S ++ +YY+RI+K+++FD       + P +   + V++ S +    
Sbjct: 403 KAGLYPLSVIGMVSSVISAYYYLRIVKVMFFDEPAE--AFSPREGRTSAVMALSAVFAAA 460

Query: 482 FCL 484
           F L
Sbjct: 461 FVL 463

ref|YP_005152035.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus A13334]
gb|AEW18033.1| proton-translocating NADH-quinone oxidoreductase [Brucella abortus A13334]
(452 aa)

Score: 268 bits (685), Expect: 5.34141e-69
Length: 403, Idn/Pos/Gap = 144/228/14 (35%/56%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
            T F   F  +   +++K + LL  I  + + +     EK + FEF +L +++ L + L+
Sbjct:  36 GTVFGGAFVIDGFSRFMKVLTLLGSIVALIMSVGFAKAEKFDKFEFPVLIVIATLGMLLM  95

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           +S   +L++Y+ LE+ +L  YVLA   R S  STEAGLKYF+LG  S+G+LL+GI+L+YG
Sbjct:  96 VSANSMLTLYLGLELQSLALYVLAAFNRDSVRSTEAGLKYFVLGSLSSGMLLYGISLVYG 155

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G   F++++       +E         L+ GL+FI     FK+SA PFHMW+PDVYEG
Sbjct: 156 YTGHIGFVEIAQAVSGGQRE-------LGLVFGLIFILAGLVFKISAVPFHMWTPDVYEG 208

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
             T +   F    K+    L I +   +   + + WQ++ +  A  S+ LG F A  Q  
Sbjct: 209 APTPVTAFFAGAPKMAAMALIIRVVTEAFAPVTHDWQQVIIFVALASMVLGAFAAIGQRN 268

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI+H+G+ ++ +++    G   ++ YM IY+ + LG FA +L++R       
Sbjct: 269 VKRLMAYSSISHMGYALVGLAAGTVIGVKGVMIYMAIYLAMTLGSFAFILAMRT-----K 323

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +  +  I +   LS+T+P++A  + I LFS++GIPP+AGFF K   FL  +++ LY L I
Sbjct: 324 DGNVENIDDLAGLSRTNPVLATVMTIFLFSLAGIPPLAGFFGKWYTFLAAVEAGLYPLAI 383

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             I  S +  FYY+R+IKI++FD       +VP+      VL 
Sbjct: 384 IGIVASVVGAFYYLRMIKIMWFDEPAAG--FVPVAGELRLVLG 424

ref|YP_004899100.1| NADH-ubiquinone oxidoreductase subunit N [Pelagibacterium halotolerans B2]
gb|AEQ51350.1| NADH-ubiquinone oxidoreductase chain N [Pelagibacterium halotolerans B2]
(481 aa)

Score: 268 bits (684), Expect: 6.52564e-69
Length: 380, Idn/Pos/Gap = 136/219/13 (35%/57%/3%)

Query:  76 SFFFFNNSLKWIKTIFLLVGICYVF-LVISNISLEKLNVFEFFLLFILSILSIFLIISTF 134
           S  F N+       + +L G  +   L +S+ S   LN FE+ +L +L+ L + +++S  
Sbjct:  68 SGGFINDGFARFMKVLILAGSAFALVLSVSSASDNGLNKFEYPVLVLLATLGMMMMVSAN 127

Query: 135 DLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGI 194
           DL+S+Y+ LE+ +L  YVLA  +R S  +TEAGLKYF+LG  S+G+LL+G +L+YG  G 
Sbjct: 128 DLMSLYVGLELQSLALYVLAAFKRDSGKATEAGLKYFVLGALSSGMLLYGASLVYGFTGH 187

Query: 195 TNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTS 254
           T           I +  ++ E    ++ GLVF+     FK+SA PFHMW+PDVYEG  T 
Sbjct: 188 TQL-------DQIAQAVALGERTPGIVFGLVFLLAGIAFKISAVPFHMWTPDVYEGAPTP 240

Query: 255 IITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRF 314
           +   F    K+    L I +   +   + + WQ++ +  +  S+ L +F A  Q   KR 
Sbjct: 241 VTAFFASAPKVAAMALLIRIVFDAFEPIASDWQQVVIFISIASMVLASFAAIGQNNLKRL 300

Query: 315 LAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQI 374
           LAYSSI HVGF ++ +S+ N  G   +  YM +Y+ + +G FA +L+L+N   Y     +
Sbjct: 301 LAYSSIGHVGFALVGLSAGNIVGVEGVAIYMAVYLTMTIGTFACILALKNDDGY-----V 355

Query: 375 RYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAIT 434
             I +   L+++ P +A  + + +FS+ G+PP+AGFF K  VFL  +++ L+ L +  + 
Sbjct: 356 ETIDDLAGLARSRPFVAAILALFMFSLVGLPPLAGFFAKWQVFLAAIEAQLFVLAVIGML 415

Query: 435 ISCLATFYYIRIIKIIYFDN 454
            S ++ FYY+R+IK++YFD 
Sbjct: 416 ASAVSAFYYLRVIKVMYFDE 435

ref|ZP_11155223.1| NADH:ubiquinone oxidoreductase subunit N [Nitratireductor indicus C115]
gb|EKF42678.1| NADH:ubiquinone oxidoreductase subunit N [Nitratireductor indicus C115]
(478 aa)

Score: 267 bits (683), Expect: 8.17451e-69
Length: 441, Idn/Pos/Gap = 149/247/20 (33%/56%/4%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PEL L +    LL+ G+F  +         S   G  V +    I  ++I   D     
Sbjct:  13 MPELLLAVGAMALLMIGVFSGSRAN------STVTGLAVALMVAVIALMLIFPSD--GRA  64

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           F   F  +   +++K + +L  +  + + +     EK + FE+ +L +L+ L + L++S 
Sbjct:  65 FGGAFVSDAFARFMKILTVLGSVVTLIMSVGFAKAEKFDKFEYPVLIMLATLGMMLMVSA 124

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            D+LS+Y+ +E+ +L  YV+A   R S  STEAGLKYF+LG  S+G++L+GI+L+YG  G
Sbjct: 125 NDMLSLYLGVELQSLALYVVAAFNRDSARSTEAGLKYFVLGALSSGMMLYGISLVYGYTG 184

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
            T        F  I    S  E    L+ GLVF+     FK+SA PFHMW+PDVYEG  T
Sbjct: 185 NTG-------FDVIAASLSGAERQLGLVFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPT 237

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F    K+    L + +   +   +   WQ++ +  +  S+ LG F A  Q   KR
Sbjct: 238 PVTAFFAAAPKMAAMALLVRVTMGAFEPIALDWQQIIVFVSIASMVLGAFAAIGQRNIKR 297

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYSSI H+G+ ++ +++ +  G + +  YM+IY+++ LG FA +L++R  RN      
Sbjct: 298 LMAYSSIGHMGYALVGLAANSEAGIHGVAIYMLIYLVMTLGTFAVILAMR--RN---EGN 352

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
           +  I +   LS T+P++A  + I++FS++GIPP+AGF+ K  VFL  + ++LY+L +  +
Sbjct: 353 VEQIDDLAGLSATNPMMATIMTILMFSLAGIPPLAGFWGKWYVFLAAIDANLYALAVIGV 412

Query: 434 TISCLATFYYIRIIKIIYFDN 454
             S ++ +YY+R+IKI++FD 
Sbjct: 413 LASVVSAYYYLRVIKIMWFDE 433

ref|YP_002549245.1| NADH dehydrogenase subunit N [Agrobacterium vitis S4]
gb|ACM36239.1| NADH ubiquinone oxidoreductase chain N [Agrobacterium vitis S4]
(479 aa)

Score: 267 bits (683), Expect: 8.243e-69
Length: 384, Idn/Pos/Gap = 129/222/11 (33%/57%/2%)

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           F   +  +   +++K + L+  I  + +         L+ FEF +L +L+ L I L+IS 
Sbjct:  64 FGGAYISDGYARFMKVLALIGSITTMVMAFGQARANDLDKFEFPVLLVLATLGILLMISA 123

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
             L+S+Y+SLE+ +L  YV+A + R S  S+EAGLKYF+LG  S+G+LL+G++L+YG  G
Sbjct: 124 NSLISLYMSLELQSLALYVIAAMNRDSARSSEAGLKYFVLGALSSGMLLYGMSLVYGFTG 183

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
              F  ++    +             L+ GLVF+     FK+SA PFHMW+PDVYEG  T
Sbjct: 184 NVEFDKIAAVLAAGHTN-------LGLIFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPT 236

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +        K+    + + +   +   +   WQ++ +  A  S+ LG+  A  Q   KR
Sbjct: 237 PVTAFLAAAPKVGAMAILVRIVIDAFQPITAEWQQIVVFIAIASMVLGSVAAIGQRNIKR 296

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYSSI H+G+ ++ +++ +  G   ++ YM+IY+++NLG FA ++++R     K    
Sbjct: 297 LMAYSSIGHMGYALVGLAAGSKQGIEGVLLYMLIYLIMNLGTFACIMAMRT----KEGEA 352

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
           +  + +   LS+T P +AF +  ++FS++GIPP+AGFF K  VFL  +++ LY+L I  +
Sbjct: 353 LETVDDLAGLSQTRPFMAFVLTALMFSLAGIPPLAGFFGKYFVFLAAIEAHLYALAIIGV 412

Query: 434 TISCLATFYYIRIIKIIYFDNCNV 457
             S +  +YY+R++K+++FD+  +
Sbjct: 413 LASVIGAYYYLRLVKVMWFDDAKI 436

ref|YP_007020049.1| NADH-quinone oxidoreductase subunit N [Candidatus Endolissoclinum patella L2]
gb|AFX98781.1| NADH-quinone oxidoreductase subunit N [Candidatus Endolissoclinum patella L2]
(484 aa)

Score: 267 bits (683), Expect: 8.31206e-69
Length: 467, Idn/Pos/Gap = 164/277/20 (35%/59%/4%)

Query:  16 ELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYFP  75
           E++L ++  ILL+ G+F + N      I+S +   ++++T T +L   I + + L+  F 
Sbjct:  16 EIFLAISGLILLMAGLFINKNTL---KIISYSTIAILLVTATLVL---IQSENALA--FQ  67

Query:  76 SFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFD 135
           + F  ++  ++IK + ++  I  + +    +   + N+FE+ +L + + L + L++S+ +
Sbjct:  68 ALFISDSFARFIKVLIIIGVIFSIIMSFDYLKRSENNLFEYPILILFATLGMMLMVSSNN 127

Query: 136 LLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGIT 195
           L+ +Y+S+E+ ++  YVLATI+R +  STEAGLKYF+LG FS+G+LL+G ++IYG  G T
Sbjct: 128 LILLYMSMELQSIALYVLATIQRNTLKSTEAGLKYFVLGAFSSGILLYGCSIIYGFTGTT 187

Query: 196 NFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSI 255
           +F  ++    S  +  S+      L++GL+F+ +   FK+S  PFHMW+PDVYEG  T +
Sbjct: 188 SFNGIATVV-STSRSTSV-----GLIIGLIFLFSGLAFKVSIVPFHMWAPDVYEGAPTPV 241

Query: 256 ITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFL 315
             LF +  KI    LF+ +      +L   WQ L +  +  S+ +G   A  QT  KR +
Sbjct: 242 TALFTLAPKIAALALFLRVMLDPFRDLLISWQPLIVFLSIASVLVGGLAAIMQTNIKRLI 301

Query: 316 AYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIR 375
           AYSSI H+G+ +I ++S N  G   ++ Y+  Y   ++GIF+ +L +R  RN   +  + 
Sbjct: 302 AYSSIAHMGYSLIGLASGNETGVTGILMYLTTYTFTSIGIFSFILCMR--RN---DSPVE 356

Query: 376 YISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITI 435
            IS+ T LS THP++A +++I + S+SGIPP+AGFF K  VF++ + + LY L    I  
Sbjct: 357 NISDLTGLSDTHPMMALALMIFMLSMSGIPPLAGFFGKWFVFISAIDAGLYVLATIGILS 416

Query: 436 SCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFF 482
           S ++ FYY+RIIKI+YF+     L  +  DK     L  S +++ FF
Sbjct: 417 SVISAFYYLRIIKIMYFEKAAQPLDAI-RDKKLQLTLCGSAMIIVFF 462

ref|ZP_10234881.1| NADH:ubiquinone oxidoreductase subunit N [Nitratireductor aquibiodomus RA22]
gb|EIM75872.1| NADH:ubiquinone oxidoreductase subunit N [Nitratireductor aquibiodomus RA22]
(478 aa)

Score: 267 bits (683), Expect: 8.31206e-69
Length: 458, Idn/Pos/Gap = 157/250/22 (34%/54%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PEL L +    LL+ G+F            S   G  V +    I  ++I   D     F
Sbjct:  14 PELILAVGAMALLMVGVFSGPRAN------STVTGLAVALLVAVIALMVIFPAD--GRAF  65

Query:  75 PSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTF 134
              F  +   +++K + L+  +  + + +     EK + FEF +L +L+ L + L+IS  
Sbjct:  66 GGAFVSDAFARFMKILTLVGSVVTLVMSVGFAKAEKFDKFEFPVLIMLATLGMMLMISAN 125

Query: 135 DLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGI 194
           D++++Y+ LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G++L+GI+L+YG  G 
Sbjct: 126 DMIALYLGLELQSLALYVVAAINRDSARSTEAGLKYFVLGALSSGMMLYGISLVYGYTGN 185

Query: 195 TNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTS 254
           T F         I    +  E    L+ GLVF+     FK+SA PFHMW+PDVYEG  T 
Sbjct: 186 TGF-------DVIAATLTGAERQLGLVFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPTP 238

Query: 255 IITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRF 314
           +   F    K+    L + +   +   + + WQ++ +  A  S+ LG F A  Q   KR 
Sbjct: 239 VTAFFAAAPKMAAMALLVRVTMGAFEPIASDWQQIIVFVAIASMILGAFAAIGQRNIKRL 298

Query: 315 LAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQI 374
           +AYSSI HVG+ ++ +++ +  G   +  YM+IY+ + LG FA +L++R  RN   +  +
Sbjct: 299 MAYSSIGHVGYALVGLAANSEAGVKGVAIYMLIYLAMTLGTFAVILAMR--RN---DANV 353

Query: 375 RYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAIT 434
             I +   LS T+P++A  + I++FS++GIPP+AGF+ K  VFL  + + LY+L +  + 
Sbjct: 354 EQIDDLAGLSSTNPMMATIMTILMFSLAGIPPLAGFWGKWYVFLAAIDAKLYALAVIGVV 413

Query: 435 ISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVL 472
            S +  FYY+R+IKI++FD       + PM     FV+
Sbjct: 414 SSVVGAFYYLRVIKIMWFDESAGG--FQPMAGELRFVM 449

ref|YP_486201.1| NADH dehydrogenase subunit N [Rhodopseudomonas palustris HaA2]
gb|ABD07290.1| Proton-translocating NADH-quinone oxidoreductase, chain N [Rhodopseudomonas palustris HaA2]
(478 aa)

Score: 267 bits (683), Expect: 8.31206e-69
Length: 480, Idn/Pos/Gap = 164/267/25 (34%/55%/5%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PEL L +   +LL+ G  Y   +  G  +++     L+V+T    L L    P      
Sbjct:  14 MPELVLVIGSMLLLMVGA-YGGQRTTG--LVTTLAVALLVLTGALELML----PAGRLVT  66

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNI-SLEKLNVFEFFLLFILSILSIFLIIS 132
           F   F  ++  +++K +  L+G     ++ S I S     +FE+ +L +LS + + L+IS
Sbjct:  67 FGGSFIVDDFARFLK-VLALIGSAVTLILSSEIMSNPSRRMFEYSILVLLSSVGMMLLIS 125

Query: 133 TFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCI 192
             DL+ +Y+ LE+++L  YV+A   R    S EAG+KYFILG  S+G+LL+G +LIYG  
Sbjct: 126 AGDLIMLYLGLELMSLALYVVAASNREDAKSNEAGMKYFILGALSSGMLLYGCSLIYGFT 185

Query: 193 GITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTL 252
           G   F  ++    +  K+ SI      L+ GLVF+     FK+SA PFHMW+PDVYEG  
Sbjct: 186 GTVQFAGIA----AAAKDGSI-----GLIFGLVFLLAGLCFKVSAVPFHMWTPDVYEGAP 236

Query: 253 TSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFK 312
           T +   F    K+    +F  +  T+  E+   WQ++ +  A  S+ LG+F A  Q   K
Sbjct: 237 TPVTAFFASAPKVAGLAVFTRVTLTAFPEIVPQWQQIVVFVAIASMALGSFAAIGQKNIK 296

Query: 313 RFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNH 372
           R +AYS+I H+GF ++ +S+    G   +I Y+ IY+ + LG F+ +L++R  RN     
Sbjct: 297 RLMAYSAIGHIGFALVGLSAGTVEGAQGVIVYISIYVAMTLGAFSVILAMR--RN---GL 351

Query: 373 QIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFA 432
            +  IS+F  LS+T+P +AF   ++LFS++GIPP+AGFF K  VF+  +K+ L++L +  
Sbjct: 352 HVENISDFAGLSRTNPALAFFFAMLLFSMAGIPPLAGFFAKFYVFMAAIKAGLFALAVIG 411

Query: 433 ITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLIINS 492
           +  S +  +YY+ IIK++YFD     +  + ++     VL+ + L    F L P  ++N+
Sbjct: 412 VVTSVVGAYYYLLIIKVMYFDEPAPGIDRMRLELRG--VLAVAGLFNMLFFLYPAPLVNA 469

ref|YP_002732564.1| NADH dehydrogenase subunit N [Brucella melitensis ATCC 23457]
ref|ZP_05466702.1| NADH dehydrogenase subunit N [Brucella melitensis bv. 2 str. 63/9]
gb|ACO00610.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella melitensis ATCC 23457]
gb|EEZ18233.1| NADH dehydrogenase subunit N [Brucella melitensis bv. 2 str. 63/9]
(478 aa)

Score: 266 bits (681), Expect: 1.26151e-68
Length: 403, Idn/Pos/Gap = 144/228/14 (35%/56%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
            T F   F  +   +++K + LL  I  + + +     EK + FEF +L +++ L + L+
Sbjct:  62 GTVFGGAFVIDGFSRFMKVLTLLGSIVALIMSVGFAKAEKFDKFEFPVLIVIATLGMLLM 121

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           +S   +L++Y+ LE+ +L  YVLA   R S  STEAGLKYF+LG  S+G+LL+GI+L+YG
Sbjct: 122 VSANSMLTLYLGLELQSLALYVLAAFNRDSVRSTEAGLKYFVLGSLSSGMLLYGISLVYG 181

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G   F++++       +E         L+ GL+FI     FK+SA PFHMW+PDVYEG
Sbjct: 182 YTGHIGFVEIAQAVSGGQRE-------LGLVFGLIFILAGLVFKISAVPFHMWTPDVYEG 234

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
             T +   F    K+    L I +   +   + + WQ++ +  A  S+ LG F A  Q  
Sbjct: 235 APTPVTAFFAGAPKMAAMALIIRVVTEAFAPVTHDWQQVIIFVALASMVLGAFAAIGQRN 294

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI+H+G+ ++ +++    G   ++ YM IY+ + LG FA +L++R       
Sbjct: 295 VKRLMAYSSISHMGYALVGLAAGTVIGVKGVMIYMAIYLAMTLGSFAFILAMR-----IK 349

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +  +  I +   LS+T+P++A  + I LFS++GIPP+AGFF K   FL  +++ LY L I
Sbjct: 350 DGNVENIDDLAGLSRTNPVLATVMTIFLFSLAGIPPLAGFFGKWYTFLAAVEAGLYPLAI 409

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             I  S +  FYY+R+IKI++FD       +VP+      VL 
Sbjct: 410 IGIVASVVGAFYYLRMIKIMWFDEPAAG--FVPVAGELRLVLG 450

ref|YP_001627492.1| NADH dehydrogenase subunit N [Brucella suis ATCC 23445]
gb|ABY37922.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella suis ATCC 23445]
(478 aa)

Score: 266 bits (681), Expect: 1.28274e-68
Length: 403, Idn/Pos/Gap = 144/230/14 (35%/57%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
            T F      +   +++K + LL  I  + + +     EK + FEF +L +++ L + L+
Sbjct:  62 GTVFGGALVIDGFSRFMKVLTLLGSIVALIMSVGFAKAEKFDKFEFLVLIVIATLGMLLM 121

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           +S   +L++Y+ LE+ +L  YVLA   R S  STEAGLKYF+LG  S+G+LL+GI+L+YG
Sbjct: 122 VSANSMLTLYLGLELQSLALYVLAAFNRDSVRSTEAGLKYFVLGSLSSGMLLYGISLVYG 181

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G   F++++   Q++   +  L     L+ GL+FI     FK+SA PFHMW+PDVYEG
Sbjct: 182 YTGHIGFVEIA---QAVSGGQHEL----GLVFGLIFILAGLVFKISAVPFHMWTPDVYEG 234

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
             T +   F    K+    L I +   +   + + WQ++ +  A  S+ LG F A  Q  
Sbjct: 235 APTPVTAFFAGAPKMAAMALIIRVVTEAFAPVTHDWQQVIIFVALASMVLGAFAAIGQRN 294

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI+H+G+ ++ +++    G   ++ YM IY+ + LG FA +L++R       
Sbjct: 295 VKRLMAYSSISHMGYALVGLAAGTVIGVKGVMIYMAIYLAMTLGSFAFILAMRT-----K 349

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +  +  I +   LS+T+P++A  + I LFS++GIPP+AGFF K   FL  +++ LY L I
Sbjct: 350 DGNVENIDDLAGLSRTNPVLATVMTIFLFSLAGIPPLAGFFGKWYTFLAAVEAGLYPLAI 409

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             I  S +  FYY+R+IKI++FD       +VP+      VL 
Sbjct: 410 IGIVASVVGAFYYLRMIKIMWFDEPAAG--FVPVAGELRLVLG 450

ref|YP_005600273.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella melitensis M5-90]
ref|YP_005596912.1| NADH dehydrogenase subunit N [Brucella melitensis M28]
ref|YP_005603615.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella melitensis NI]
gb|ADZ65903.1| NADH dehydrogenase subunit N [Brucella melitensis M28]
gb|ADZ86769.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella melitensis M5-90]
gb|AEQ08433.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella melitensis NI]
(452 aa)

Score: 266 bits (681), Expect: 1.37128e-68
Length: 403, Idn/Pos/Gap = 144/228/14 (35%/56%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
            T F   F  +   +++K + LL  I  + + +     EK + FEF +L +++ L + L+
Sbjct:  36 GTVFGGAFVIDGFSRFMKVLTLLGSIVALIMSVGFAKAEKFDKFEFPVLIVIATLGMLLM  95

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           +S   +L++Y+ LE+ +L  YVLA   R S  STEAGLKYF+LG  S+G+LL+GI+L+YG
Sbjct:  96 VSANSMLTLYLGLELQSLALYVLAAFNRDSVRSTEAGLKYFVLGSLSSGMLLYGISLVYG 155

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G   F++++       +E         L+ GL+FI     FK+SA PFHMW+PDVYEG
Sbjct: 156 YTGHIGFVEIAQAVSGGQRE-------LGLVFGLIFILAGLVFKISAVPFHMWTPDVYEG 208

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
             T +   F    K+    L I +   +   + + WQ++ +  A  S+ LG F A  Q  
Sbjct: 209 APTPVTAFFAGAPKMAAMALIIRVVTEAFAPVTHDWQQVIIFVALASMVLGAFAAIGQRN 268

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI+H+G+ ++ +++    G   ++ YM IY+ + LG FA +L++R       
Sbjct: 269 VKRLMAYSSISHMGYALVGLAAGTVIGVKGVMIYMAIYLAMTLGSFAFILAMR-----IK 323

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +  +  I +   LS+T+P++A  + I LFS++GIPP+AGFF K   FL  +++ LY L I
Sbjct: 324 DGNVENIDDLAGLSRTNPVLATVMTIFLFSLAGIPPLAGFFGKWYTFLAAVEAGLYPLAI 383

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             I  S +  FYY+R+IKI++FD       +VP+      VL 
Sbjct: 384 IGIVASVVGAFYYLRMIKIMWFDEPAAG--FVPVAGELRLVLG 424

ref|ZP_05114208.1| proton-translocating NADH-quinone oxidoreductase, chain N subfamily [Labrenzia alexandrii DFL-11]
gb|EEE44807.1| proton-translocating NADH-quinone oxidoreductase, chain N subfamily [Labrenzia alexandrii DFL-11]
(469 aa)

Score: 266 bits (681), Expect: 1.44168e-68
Length: 474, Idn/Pos/Gap = 151/269/22 (31%/56%/4%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE+ L +   +LL+ G F   N  Y     +   G + ++  T+++ L++  P F  T+
Sbjct:   4 LPEIILAIGAMVLLMVGAFGGRNISY-----AVFGGAMGLLGGTFLVLLLV--PSFGETF  56

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
             SF   ++   ++K + L+     + +  +    +  + FE+ +L IL+ L + L++S 
Sbjct:  57 GGSFIL-DDYAYFLKLVVLVGSFFAIAMSWAYAKSQSFDHFEYPILIILATLGMMLMLSA 115

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            D++++Y+ LE+ +L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G++L+YG  G
Sbjct: 116 NDMIALYMGLELQSLSLYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGMSLVYGFTG 175

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
             +F  ++   + + +E + +     L++GL FI     FK+SA PFHMW+PDVYEG  T
Sbjct: 176 QISFAAIA---ELLSQEGASI----GLIIGLTFILAGLAFKISAVPFHMWTPDVYEGAPT 228

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F    K+    + + +   +   + + WQ++ +  +  S+ LG F A  QT  KR
Sbjct: 229 PVTAFFAAAPKVAAMGMLVRIVIDAFHPVTSDWQQIIVFVSIASMALGAFAAIGQTNLKR 288

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYSSI H+G+ ++ +++    G   +IFYM+ Y+ + LG+FA +LS+R     + +  
Sbjct: 289 LMAYSSIGHMGYALVGLAAGTQTGVEGVIFYMVAYLGMTLGVFACILSMR-----RQDGM 343

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
           +  IS+ + LS+T+  +A  + +++FS++GIPP+ GFF K  VF   +++ LY L +  +
Sbjct: 344 VEEISDLSGLSQTNLPMAVILGLLMFSLAGIPPLIGFFGKWFVFAAAVEAGLYPLAVIGV 403

Query: 434 TISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPN 487
             S +  +YY+RI+K+++FD       + PM      VL  S + + FF + P 
Sbjct: 404 LASVVGCYYYLRIVKVMFFDEPAE--AFQPMPTELKVVLGLSGVFVVFFWVMPG 455

ref|YP_001833485.1| proton-translocating NADH-quinone oxidoreductase subunit N [Beijerinckia indica subsp. indica ATCC 9039]
sp|B2IHV3.1|NUON_BEII9 RecName: Full=NADH-quinone oxidoreductase subunit N; AltName: Full=NADH dehydrogenase I subunit N; AltName: Full=NDH-1 subunit N
gb|ACB95996.1| proton-translocating NADH-quinone oxidoreductase, chain N [Beijerinckia indica subsp. indica ATCC 9039]
(477 aa)

Score: 266 bits (681), Expect: 1.44168e-68
Length: 486, Idn/Pos/Gap = 157/270/26 (32%/55%/5%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PEL L   V +L++ G      K    P+     G L +     IL L++ T    +  
Sbjct:  12 LPELILAGGVLLLILIGAIR--GKDSDGPMTELAVGLLGIA----ILTLVLGT-KTQAVL  64

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           F   F  +   +++K + L+  +  + +  + ++ EK++ FEF +L +LS L + ++IS 
Sbjct:  65 FDGSFIDDAFGRFMKVLVLIGSLVSLIMGQTYLAREKIDKFEFPILILLSTLGMLMLISA 124

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
             L+++Y+ LE+++L  YV+A   R    ++EAGLKYF+LG  S+G+LL+G +LIYG  G
Sbjct: 125 TGLIALYLGLELMSLALYVIAAFHRDDVKASEAGLKYFVLGALSSGMLLYGASLIYGFAG 184

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
             NF  ++    ++  E S+      ++ GLVF++    FK+S  PFHMW+PDVYEG  T
Sbjct: 185 TVNFTGIA---TALHGETSL-----GVVFGLVFLTAGLAFKMSTVPFHMWTPDVYEGAPT 236

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F    K+    + + +  T+   +   WQ++ +  +  S+ LG+F A  QT  KR
Sbjct: 237 PVTAFFASAPKLAAIAITMRIMITAFAGIKPQWQQIIVFISILSMALGSFAAIGQTNIKR 296

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLR-NFRNYKFNH 372
            +AYSSI H+GF ++ +++    G   ++ YM IY+++ LG FA++LS+R N  N     
Sbjct: 297 LMAYSSIGHMGFALVGLAAGTETGIQGVLAYMAIYLVMTLGTFAAILSMRVNGVN----- 351

Query: 373 QIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFA 432
            +  IS+   L++T   +AF + I++FS++GIPP+AGFF K  VF   +++ LY L +  
Sbjct: 352 -VEQISDLAGLARTRGSMAFFLAIMMFSLAGIPPLAGFFAKWYVFNAAIQAHLYPLAVIG 410

Query: 433 ITISCLATFYYIRIIKIIYFDN-CNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLIIN 491
           +  S +  +YY+RI+K++YFD+    +    P   +   V   +VLLL   C+ P   + 
Sbjct: 411 VLCSTVGAYYYLRIVKVMYFDDPAPAFDRPTPTLAAVLIVTGLAVLLL---CVYPGSFVE 467

Query: 492 SIYIIS 497
           +  + +
Sbjct: 468 ATTVAA 473

ref|YP_003495128.1| NADH dehydrogenase subunit 2 [Pycnococcus provasolii]
gb|ACV72088.1| NADH dehydrogenase subunit 2 [Pycnococcus provasolii]
(502 aa)

Score: 266 bits (681), Expect: 1.46594e-68
Length: 490, Idn/Pos/Gap = 174/270/26 (35%/55%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D+   +PE++L   + + L++G+ +S        ILS N   L ++   ++  L+  +P
Sbjct:  18 NDLVSLLPEIFLVCCICLFLVHGVVFSKTGR----ILSTNVANLSILALVFVCILLCCSP  73

Query:  68 --DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSIL 125
             ++L+ Y  S FF ++ ++ IK   LL  I  V L +  I LEK N FE+ +L ++S+ 
Sbjct:  74 GGNYLAAY--SCFFEDDFIRIIKVFLLLTCIFCVTLSLFYIQLEKSNTFEYSVLLLISLF 131

Query: 126 SIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGI 185
            I  ++   D LS+Y+ LE+  L FY LA   R SEF+TEAGLKYF++G  ++G  LFG 
Sbjct: 132 GIIAVLGANDFLSLYLGLELQALSFYTLAANVRVSEFATEAGLKYFVIGAVASGFYLFGA 191

Query: 186 ALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSP 245
           +L+YG  G   F D SL    I   +        + L      ++F FK+ A PFH W P
Sbjct: 192 SLLYGFTGCVRFSDFSLLLSHIAPAEV-----EGIFLAFFIFFSSFLFKVGAVPFHAWVP 246

Query: 246 DVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIA 305
           DVYEGT  ++  +F +  K+ +F +   L     F LF+VWQ   ++CA FS   G+  A
Sbjct: 247 DVYEGTSLNVTAIFALLPKLALFGVITRLLFCYFFSLFDVWQFPFVLCAVFSFVWGSLAA 306

Query: 306 FAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNF 365
             Q + KR LAY  I+H G+++  V S    G   ++ Y++ YIL  + IF SL+ LR  
Sbjct: 307 LGQGRIKRLLAYGGISHSGYLLFGVCSGTVYGAQGVVIYLLSYILSGVTIFCSLVGLRFS 366

Query: 366 RNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSL 425
           R       +RYI++F  LS   P +AF+I   L S +GIPP+ GFF KL +FL+ L  SL
Sbjct: 367 R-------VRYIADFAGLSLFSPGVAFAIAASLLSAAGIPPVVGFFGKLSIFLSALAGSL 419

Query: 426 YSLVIFAITISCLATFYYIRIIKIIYFDNCNVWL------IYVPMDKSKAFVLSFSVLLL 479
           Y   +F +  S ++TFYY+RI++ I+F+N +  L            K  +F++ F  +LL
Sbjct: 420 YVGALFGVLCSVISTFYYLRILRTIFFENGSRPLGAFFSFFGSYFSKELSFLVGFCAVLL 479

Query: 480 TFFCLNPNLI 489
            +  +NP ++
Sbjct: 480 FWIPINPRIL 489

ref|YP_570001.1| NADH dehydrogenase subunit N [Rhodopseudomonas palustris BisB5]
gb|ABE40100.1| Proton-translocating NADH-quinone oxidoreductase, chain N [Rhodopseudomonas palustris BisB5]
(478 aa)

Score: 266 bits (680), Expect: 1.5935e-68
Length: 441, Idn/Pos/Gap = 152/247/21 (34%/56%/4%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PEL L +   +LL+ G  Y   +  G   L      L+++  T  L L++     ++  
Sbjct:  14 MPELVLVIGAMLLLMLGA-YRGERTTG---LITTLAVLLLVA-TGALELMLPAGKLVT--  66

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           F   F  ++  +++K + L+     + L    +S     +FE+ +L +LS   + L+IS 
Sbjct:  67 FGGSFIVDDFARFLKVLALIGSAVTLILSAEILSNPSRRIFEYAILVLLSSAGMMLLISA 126

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            DL+ +Y+ LE+++L  YV+A   R    S EAG+KYF+LG  S+G+LL+G +LIYG  G
Sbjct: 127 GDLIMLYLGLELMSLALYVVAASNREDAKSNEAGMKYFVLGALSSGMLLYGASLIYGFTG 186

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
              F  ++    +  K+ S+      L+ GLVF+     FK+SA PFHMW+PDVYEG  T
Sbjct: 187 TVQFAGIA----AAAKDGSV-----GLVFGLVFLLAGLCFKVSAVPFHMWTPDVYEGAPT 237

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F    K+    +F  +  T+   +   WQ++ +  A  S+ LG+F A  Q   KR
Sbjct: 238 PVTAFFASAPKVAGLAVFTRVTLTAFPGIVPQWQQIVVFVAIASMALGSFAAIGQKNIKR 297

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYS+I H+GF ++ +S+    G   +I Y+ IY+ + LG FA +L++R  RN      
Sbjct: 298 LMAYSAIGHIGFALVGLSAGTVEGAQGVIIYISIYVAMTLGAFAVILAMR--RN---GLH 352

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
           +  IS+F  LS+T P +AF   ++LFS++GIPP+AGFF K  VF+  +K+ L++L +  +
Sbjct: 353 VENISDFAGLSRTKPALAFFFAMLLFSMAGIPPLAGFFAKFYVFMAAIKAGLFALAVIGV 412

Query: 434 TISCLATFYYIRIIKIIYFDN 454
             S +  +YY+ IIK++YFD 
Sbjct: 413 VTSVVGAYYYLAIIKVMYFDE 433

ref|ZP_10354623.1| proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium sp. GXF4]
gb|EIZ85747.1| proton-translocating NADH-quinone oxidoreductase subunit N [Methylobacterium sp. GXF4]
(481 aa)

Score: 266 bits (680), Expect: 1.62032e-68
Length: 370, Idn/Pos/Gap = 136/223/13 (36%/60%/3%)

Query:  85 KWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTFDLLSIYISLE 144
           K +K++ LL     + L       E ++ FEF +L +L  + + +++S  DL+++Y+ LE
Sbjct:  80 KVMKSLVLLGSAATILLAHDFFKREHIDRFEFPVLIVLCTIGMMVMVSANDLIALYLGLE 139

Query: 145 MLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGITNFIDLSLFF 204
           + +L  YV+A   R    STEAGLKYF+LG  S+G+LL+G +L+YG  G  +F  +    
Sbjct: 140 LQSLAAYVIAAFHRDDARSTEAGLKYFVLGALSSGMLLYGASLVYGFTGTVSFPGI---- 195

Query: 205 QSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTSIITLFIIFTK 264
            S + E + L I    +LG+VF++    FK++A PFHMW+PDVYEG+ T +   F    K
Sbjct: 196 VSALNETAGLGI----VLGIVFLAAGVCFKMAAVPFHMWTPDVYEGSPTPVTAFFATAPK 251

Query: 265 ITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRFLAYSSINHVG 324
           +    + + +F  ++ ++  +WQ++ +  A  S+ LG+F A  Q   KR +AYSSI ++G
Sbjct: 252 MAAVAMTVRVFIGAMPDVTAIWQQIFIFVAVVSMALGSFAAIGQRSIKRLMAYSSIANIG 311

Query: 325 FIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQIRYISEFTILS 384
           + +I ++  +  G   L+ YM+IY+ + LG FA +LSLR  R   F      I + + LS
Sbjct: 312 YALIGLACGSEEGISGLVTYMIIYLAMTLGTFAIILSLRR-REVMFES----IDDLSGLS 366

Query: 385 KTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAITISCLATFYYI 444
           +THP +AF +  ++FS++GIPP+AGFF K  VF   +K+ L +L +  +  S +  +YY+
Sbjct: 367 RTHPWLAFCLAAMMFSLAGIPPLAGFFAKFYVFAAAIKAGLVTLAVIGVVTSVVGAYYYL 426

Query: 445 RIIKIIYFDN 454
           R++KI+YFD 
Sbjct: 427 RLVKIMYFDE 436

emb|CCF19003.1| NADH-quinone oxidoreductase chain N (NADH dehydrogenase I, chain N) (NDH-1, chain N) [Rhizobium sp.]
(480 aa)

Score: 266 bits (680), Expect: 1.89867e-68
Length: 450, Idn/Pos/Gap = 143/255/19 (31%/56%/4%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           ++ + + +PE+ L +    LL+ G+F         P ++   G  V +     L+L++  
Sbjct:   7 LASLQLSMPEIILAVGALALLMIGVFSGDRSA---PTVT---GLAVALLIAAGLWLVLAP  60

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILS 126
            +     +   F  +   +++K + L+  +  + + + +   E+L+ FEF +L +L+ L 
Sbjct:  61 GE--GEAYGGAFLLDPFARFMKVVALIGSVTAMIMTVGHARSEQLDRFEFPVLMVLATLG 118

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           + L+IS  DLL++Y+ LE+++L  YV A I R S  STE+GLKYF+LG  S+G+LL+G +
Sbjct: 119 MMLLISANDLLALYLGLELMSLSLYVCAAINRDSLRSTESGLKYFVLGSLSSGMLLYGCS 178

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G T F +++    +  + +S+      L+ GLVF+     FK+SA PFHMW+PD
Sbjct: 179 LVYGFTGNTGFDEIAAVLSA--ETRSL-----GLVFGLVFVLAGVCFKISAVPFHMWTPD 231

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  T +   F    K+    + + +   +   +   WQ++ +  +  S+ LG+F A 
Sbjct: 232 VYEGAPTPVTAFFAAGPKVAGMAILVRVVSEAFMPIVADWQQILVFVSIASMLLGSFAAI 291

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q   KR +AYSSI H+GF ++ +++    G   +I YM+IY+++ LG FA ++++R   
Sbjct: 292 GQRNIKRLMAYSSIGHMGFALVGLAAGTETGVSGVILYMLIYMVMTLGTFACIMAMRR-- 349

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
             K    +  + +   L+ T P +A  +  ++FS++GIPP+AGFF K  VF+  +++ LY
Sbjct: 350 --KEGENVENVDDLAGLASTKPFMAVVLTALMFSMAGIPPLAGFFAKYFVFIAAIEAKLY 407

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           +L I  +  S +  +YY+RI+K+++FD   
Sbjct: 408 ALAIIGVLTSVVGAYYYLRIVKLMWFDEAT 437

ref|YP_448699.1| NADH dehydrogenase subunit 2 [Dictyota dichotoma]
gb|AAS79084.1| NADH dehydrogenase subunit 2 (mitochondrion) [Dictyota dichotoma]
(495 aa)

Score: 266 bits (680), Expect: 1.89867e-68
Length: 482, Idn/Pos/Gap = 167/269/12 (34%/55%/2%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D+   +PE++L LT  ++L+YG F   N    Y  L      L +++     FL++N P
Sbjct:  11 ADVVALLPEVFLALTFLVILVYGSFQVANATELYTYLLPFVSRLTLLSLVLSFFLVLNNP  70

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
              +  + + F  +    W K   +      V L    + L ++  +E F+ FI   LS+
Sbjct:  71 IIDTVVWNATFVLDYLSSWSKLFVIFSVFLCVLLSEEYLFLARIRPYEVFVFFIGITLSL 130

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
           FL++S++DLLS+Y+S+E L+LIFY LA  +R S FS EAGLKYFILG  ++   LFG +L
Sbjct: 131 FLLVSSYDLLSVYLSIEFLSLIFYTLAAWKRDSGFSAEAGLKYFILGSLASVFFLFGSSL 190

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           +Y   G TN   L+L F + + + SIL       +G++ +++A  FKL +AP+HMW  DV
Sbjct: 191 LYLVTGTTNLGSLTLLFNN-LSDFSILGC-----VGMLCVASALLFKLGSAPYHMWVIDV 244

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELF-NVWQKLTLICAFFSLFLGTFIAF 306
           YEG  T +  LF    K+ IF + + L     + LF +VW+    IC   SLF G     
Sbjct: 245 YEGAPTIVSLLFAAVPKLAIFIVLLRLVFLGSWSLFSSVWENFFFICGLLSLFFGCLGGL 304

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            + KFKR L YS++ H+GF+ + V   +  G  ++ FY+ IY   ++ ++A L+ L    
Sbjct: 305 GEIKFKRVLGYSAVGHIGFLCLGVGCGSVEGSQAVFFYLFIYTFTSIYVWAYLMHLGPIS 364

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
                + +  +    I+ +++P +     ++ FS++GIPP  GFF K++VF+  +    Y
Sbjct: 365 ----KNWLSLVDSVGIV-QSNPTLGLLTCLMFFSLAGIPPFGGFFAKMVVFVALVDGYFY 419

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNP 486
            + + A+  S +A FYY+RIIKI+YF+  N W  +  + KS +FVLS + L++  F +NP
Sbjct: 420 IVCVVAVITSSIAAFYYLRIIKILYFEKSNTWAFFDTISKSHSFVLSLTSLIVLLFAVNP 479

Query: 487 NL 488
           N+
Sbjct: 480 NI 481

ref|YP_001258793.1| NADH dehydrogenase subunit N [Brucella ovis ATCC 25840]
ref|ZP_03785349.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella ceti str. Cudo]
ref|YP_003106755.1| NADH dehydrogenase subunit N [Brucella microti CCM 4915]
ref|ZP_05933106.1| proton-translocating NADH-quinone oxidoreductase [Brucella ceti M13/05/1]
ref|ZP_05936286.1| proton-translocating NADH-quinone oxidoreductase [Brucella ceti B1/94]
ref|ZP_05953629.1| proton-translocating NADH-quinone oxidoreductase [Brucella pinnipedialis M163/99/10]
ref|ZP_05956666.1| proton-translocating NADH-quinone oxidoreductase [Brucella pinnipedialis B2/94]
ref|ZP_05960873.1| proton-translocating NADH-quinone oxidoreductase [Brucella ceti M644/93/1]
ref|ZP_05964124.1| proton-translocating NADH-quinone oxidoreductase [Brucella neotomae 5K33]
ref|ZP_05995845.1| proton-translocating NADH-quinone oxidoreductase [Brucella suis bv. 5 str. 513]
ref|ZP_06001732.1| NADH dehydrogenase subunit N [Brucella sp. F5/99]
ref|ZP_06096646.1| proton-translocating NADH-quinone oxidoreductase [Brucella sp. 83/13]
ref|ZP_06101062.1| proton-translocating NADH-quinone oxidoreductase [Brucella pinnipedialis M292/94/1]
ref|ZP_06110526.1| proton-translocating NADH-quinone oxidoreductase [Brucella ceti M490/95/1]
ref|ZP_06792845.1| NADH dehydrogenase I subunit N [Brucella sp. NVSL 07-0026]
ref|ZP_07471080.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella sp. NF 2653]
ref|ZP_07474625.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella sp. BO2]
ref|ZP_07476351.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella inopinata BO1]
ref|YP_004755911.1| NADH dehydrogenase subunit N [Brucella pinnipedialis B2/94]
gb|ABQ60243.1| NADH dehydrogenase I, N subunit [Brucella ovis ATCC 25840]
gb|EEH14362.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella ceti str. Cudo]
gb|ACU47806.1| NADH dehydrogenase subunit N [Brucella microti CCM 4915]
gb|EEX87242.1| proton-translocating NADH-quinone oxidoreductase [Brucella ceti B1/94]
gb|EEX90482.1| proton-translocating NADH-quinone oxidoreductase [Brucella ceti M13/05/1]
gb|EEX97862.1| proton-translocating NADH-quinone oxidoreductase [Brucella ceti M644/93/1]
gb|EEY00189.1| proton-translocating NADH-quinone oxidoreductase [Brucella pinnipedialis B2/94]
gb|EEY04404.1| proton-translocating NADH-quinone oxidoreductase [Brucella neotomae 5K33]
gb|EEY06955.1| proton-translocating NADH-quinone oxidoreductase [Brucella pinnipedialis M163/99/10]
gb|EEY26003.1| NADH dehydrogenase subunit N [Brucella sp. F5/99]
gb|EEY29815.1| proton-translocating NADH-quinone oxidoreductase [Brucella suis bv. 5 str. 513]
gb|EEZ08427.1| proton-translocating NADH-quinone oxidoreductase [Brucella ceti M490/95/1]
gb|EEZ30963.1| proton-translocating NADH-quinone oxidoreductase [Brucella pinnipedialis M292/94/1]
gb|EEZ32764.1| proton-translocating NADH-quinone oxidoreductase [Brucella sp. 83/13]
gb|EFG37760.1| NADH dehydrogenase I subunit N [Brucella sp. NVSL 07-0026]
gb|EFM57656.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella inopinata BO1]
gb|EFM59388.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella sp. BO2]
gb|EFM62899.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella sp. NF 2653]
gb|AEK54143.1| NADH dehydrogenase, subunit N [Brucella pinnipedialis B2/94]
(478 aa)

Score: 266 bits (680), Expect: 2.01287e-68
Length: 403, Idn/Pos/Gap = 143/227/14 (35%/56%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
            T F      +   +++K + LL  I  + + +     EK + FEF +L +++ L + L+
Sbjct:  62 GTVFGGALVIDGFSRFMKVLTLLGSIVALIMSVGFAKAEKFDKFEFPVLIVIATLGMLLM 121

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           +S   +L++Y+ LE+ +L  YVLA   R S  STEAGLKYF+LG  S+G+LL+GI+L+YG
Sbjct: 122 VSANSMLTLYLGLELQSLALYVLAAFNRDSVRSTEAGLKYFVLGSLSSGMLLYGISLVYG 181

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G   F++++       +E         L+ GL+FI     FK+SA PFHMW+PDVYEG
Sbjct: 182 YTGHIGFVEIAQAVSGGQRE-------LGLVFGLIFILAGLVFKISAVPFHMWTPDVYEG 234

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
             T +   F    K+    L I +   +   + + WQ++ +  A  S+ LG F A  Q  
Sbjct: 235 APTPVTAFFAGAPKMAAMALIIRVVTEAFAPVTHDWQQVIIFVALASMVLGAFAAIGQRN 294

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI+H+G+ ++ +++    G   ++ YM IY+ + LG FA +L++R       
Sbjct: 295 VKRLMAYSSISHMGYALVGLAAGTVIGVKGVMIYMAIYLAMTLGSFAFILAMRT-----K 349

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +  +  I +   LS+T+P++A  + I LFS++GIPP+AGFF K   FL  +++ LY L I
Sbjct: 350 DGNVENIDDLAGLSRTNPVLATVMTIFLFSLAGIPPLAGFFGKWYTFLAAVEAGLYPLAI 409

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             I  S +  FYY+R+IKI++FD       +VP+      VL 
Sbjct: 410 IGIVASVVGAFYYLRMIKIMWFDEPAAG--FVPVAGELRLVLG 450

ref|YP_001592666.1| NADH dehydrogenase subunit N [Brucella canis ATCC 23365]
ref|ZP_05837091.1| NADH dehydrogenase subunit N [Brucella suis bv. 4 str. 40]
ref|ZP_05998505.1| proton-translocating NADH-quinone oxidoreductase [Brucella suis bv. 3 str. 686]
gb|ABX61895.1| proton-translocating NADH-quinone oxidoreductase, chain N [Brucella canis ATCC 23365]
gb|EEW91219.1| NADH dehydrogenase subunit N [Brucella suis bv. 4 str. 40]
gb|EEY32475.1| proton-translocating NADH-quinone oxidoreductase [Brucella suis bv. 3 str. 686]
(478 aa)

Score: 266 bits (679), Expect: 2.45914e-68
Length: 403, Idn/Pos/Gap = 144/230/14 (35%/57%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
            T F      +   +++K + LL  I  + + +     EK + FEF +L +++ L + L+
Sbjct:  62 GTVFGGALVIDGFSRFMKVLTLLGSIVALIMSVGFAKAEKFDKFEFPVLIVIATLGMLLM 121

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           +S   +L++Y+ LE+ +L  YVLA   R S  STEAGLKYF+LG  S+G+LL+GI+L+YG
Sbjct: 122 VSANSMLTLYLGLELQSLALYVLAAFNRDSVRSTEAGLKYFVLGSLSSGMLLYGISLVYG 181

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G   F++++   Q++   +  L     L+ GL+FI     FK+SA PFHMW+PDVYEG
Sbjct: 182 YTGHIGFVEIA---QAVSGGQHEL----GLVFGLIFILAGLVFKISAVPFHMWTPDVYEG 234

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
             T +   F    K+    L I +   +   + + WQ++ +  A  S+ LG F A  Q  
Sbjct: 235 APTPVTAFFAGAPKMAAMALIIRVVTEAFAPVTHDWQQVIIFVALASMVLGAFAAIGQRN 294

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI+H+G+ ++ +++    G   ++ YM IY+ + LG FA +L++R       
Sbjct: 295 VKRLMAYSSISHMGYALVGLAAGTVIGVKGVMIYMAIYLAMTLGSFAFILAMRT-----K 349

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +  +  I +   LS+T+P++A  + I LFS++GIPP+AGFF K   FL  +++ LY L I
Sbjct: 350 DGNVENIDDLAGLSRTNPVLATVMTIFLFSLAGIPPLAGFFGKWYTFLAAVEAGLYPLAI 409

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             I  S +  FYY+R+IKI++FD       +VP+      VL 
Sbjct: 410 IGIVASVVGAFYYLRMIKIMWFDEPAAG--FVPVAGELRLVLG 450

ref|NP_697829.1| NADH dehydrogenase subunit N [Brucella suis 1330]
ref|YP_005154501.1| NADH dehydrogenase subunit N [Brucella suis VBI22]
ref|YP_005615653.1| NADH dehydrogenase subunit N [Brucella suis 1330]
gb|AAN29744.1| NADH dehydrogenase I, N subunit [Brucella suis 1330]
gb|AEM18161.1| NADH dehydrogenase subunit N [Brucella suis 1330]
gb|AEU05829.1| NADH dehydrogenase subunit N [Brucella suis VBI22]
(478 aa)

Score: 265 bits (678), Expect: 2.71811e-68
Length: 403, Idn/Pos/Gap = 144/230/14 (35%/57%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
            T F      +   +++K + LL  I  + + +     EK + FEF +L +++ L + L+
Sbjct:  62 GTVFGGALVIDGFSRFMKVLTLLGSIVALIMSVGFAKAEKFDKFEFPVLIVIATLGMLLM 121

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           +S   +L++Y+ LE+ +L  YVLA   R S  STEAGLKYF+LG  S+G+LL+GI+L+YG
Sbjct: 122 VSANSMLTLYLGLELQSLALYVLAAFNRDSVRSTEAGLKYFVLGSLSSGMLLYGISLVYG 181

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G   F++++   Q++   +  L     L+ GL+FI     FK+SA PFHMW+PDVYEG
Sbjct: 182 YTGHIGFVEIA---QAVSGGQHEL----GLVFGLIFILAGLVFKISAVPFHMWTPDVYEG 234

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
             T +   F    K+    L I +   +   + + WQ++ +  A  S+ LG F A  Q  
Sbjct: 235 APTPVTAFFAGAPKMAAMALIIRVVTEAFAPVTHDWQQVIIFVALASMVLGAFAAIGQRN 294

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI+H+G+ ++ +++    G   ++ YM IY+ + LG FA +L++R       
Sbjct: 295 VKRLMAYSSISHMGYALVGLAAGTVIGVKGVMIYMAIYLAMTLGSFAFILAMR-----AK 349

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +  +  I +   LS+T+P++A  + I LFS++GIPP+AGFF K   FL  +++ LY L I
Sbjct: 350 DGNVENIDDLAGLSRTNPVLATVMTIFLFSLAGIPPLAGFFGKWYTFLAAVEAGLYPLAI 409

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             I  S +  FYY+R+IKI++FD       +VP+      VL 
Sbjct: 410 IGIVASVVGAFYYLRMIKIMWFDEPAAG--FVPVAGELRLVLG 450

ref|YP_004303809.1| Proton-translocating NADH-quinone oxidoreductase, chain N [Polymorphum gilvum SL003B-26A1]
gb|ADZ70507.1| Proton-translocating NADH-quinone oxidoreductase, chain N [Polymorphum gilvum SL003B-26A1]
(480 aa)

Score: 265 bits (678), Expect: 3.29314e-68
Length: 492, Idn/Pos/Gap = 154/264/21 (31%/53%/4%)

Query:   1 MVIIINISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYIL  60
           M  +  + D+   +PE++L +   +LL+ G+F       G+ +   + G L+  T  ++L
Sbjct:   1 MTDVTQLPDLLPVLPEIFLAVGALVLLMIGVF--GGPRIGFLVNGMSMG-LIAATGLFVL  57

Query:  61 FLIINTPDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLF 120
                    L   F   F  +    ++K + L      + +  +    +  + FE+ +L 
Sbjct:  58 PFGAQ----LGETFGGAFLLDGFAYYMKLLVLTGSFFAIAMSWAYAKSQAFDRFEYPVLI 113

Query: 121 ILSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGL 180
           +L+ L + L++S  D++++Y+ LE+ +L  YV+A I R S  STE+GLKYF+LG  S+G+
Sbjct: 114 VLATLGMLLMLSANDMIALYLGLELQSLALYVVAAINRDSVRSTESGLKYFVLGSLSSGM 173

Query: 181 LLFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPF 240
           LL+G++L+YG  G   F  ++   + + +E + L     L+ GLVF+     FK+SA PF
Sbjct: 174 LLYGMSLVYGFSGQVGFPQIA---EVLTREGASL----GLVFGLVFVLAGLAFKISAVPF 226

Query: 241 HMWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFL 300
           HMW+PDVYEG  T +        K+    L + +   +   +   WQ++ +  A  S+ L
Sbjct: 227 HMWTPDVYEGAPTPVTAFLAAAPKVAAMGLTVRVVIDAFQPVTADWQQIIVFVAIASMLL 286

Query: 301 GTFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLL 360
           G F A  QT  KR +AYSSI H+G+ ++ +++    G   ++FYM  Y+ + LG FA +L
Sbjct: 287 GAFAAIGQTNIKRLMAYSSIGHMGYALVGLAAGTVAGVEGVLFYMTAYLAMTLGTFACIL 346

Query: 361 SLRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTC 420
           S+R     + +  +  ISE   LS+T+  +A  + I+L+S++GIPP  GFF K  VF   
Sbjct: 347 SMR-----RKDGMVEEISELAGLSRTNLPMAILLAILLWSLAGIPPFIGFFGKWFVFSAA 401

Query: 421 LKSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLT 480
           +++ LY L I  +  S +  +YY+R+IK+++FD        +PM+     VL  S L + 
Sbjct: 402 VEAGLYPLAIIGVLASVVGAYYYLRVIKVMFFDEPAEKFEAMPMELR--VVLGLSSLFVI 459

Query: 481 FFCLNPNLIINS 492
           FF   P  ++ +
Sbjct: 460 FFAAVPGPVVEA 471

ref|YP_005114879.1| proton-translocating NADH-quinone oxidoreductase [Brucella canis HSK A52141]
gb|AEW13302.1| proton-translocating NADH-quinone oxidoreductase [Brucella canis HSK A52141]
(452 aa)

Score: 265 bits (678), Expect: 3.32073e-68
Length: 403, Idn/Pos/Gap = 144/230/14 (35%/57%/3%)

Query:  71 STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLI 130
            T F      +   +++K + LL  I  + + +     EK + FEF +L +++ L + L+
Sbjct:  36 GTVFGGALVIDGFSRFMKVLTLLGSIVALIMSVGFAKAEKFDKFEFPVLIVIATLGMLLM  95

Query: 131 ISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYG 190
           +S   +L++Y+ LE+ +L  YVLA   R S  STEAGLKYF+LG  S+G+LL+GI+L+YG
Sbjct:  96 VSANSMLTLYLGLELQSLALYVLAAFNRDSVRSTEAGLKYFVLGSLSSGMLLYGISLVYG 155

Query: 191 CIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEG 250
             G   F++++   Q++   +  L     L+ GL+FI     FK+SA PFHMW+PDVYEG
Sbjct: 156 YTGHIGFVEIA---QAVSGGQHEL----GLVFGLIFILAGLVFKISAVPFHMWTPDVYEG 208

Query: 251 TLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTK 310
             T +   F    K+    L I +   +   + + WQ++ +  A  S+ LG F A  Q  
Sbjct: 209 APTPVTAFFAGAPKMAAMALIIRVVTEAFAPVTHDWQQVIIFVALASMVLGAFAAIGQRN 268

Query: 311 FKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKF 370
            KR +AYSSI+H+G+ ++ +++    G   ++ YM IY+ + LG FA +L++R       
Sbjct: 269 VKRLMAYSSISHMGYALVGLAAGTVIGVKGVMIYMAIYLAMTLGSFAFILAMRT-----K 323

Query: 371 NHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVI 430
           +  +  I +   LS+T+P++A  + I LFS++GIPP+AGFF K   FL  +++ LY L I
Sbjct: 324 DGNVENIDDLAGLSRTNPVLATVMTIFLFSLAGIPPLAGFFGKWYTFLAAVEAGLYPLAI 383

Query: 431 FAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLS 473
             I  S +  FYY+R+IKI++FD       +VP+      VL 
Sbjct: 384 IGIVASVVGAFYYLRMIKIMWFDEPAAG--FVPVAGELRLVLG 424

ref|NP_771544.1| NADH dehydrogenase subunit N [Bradyrhizobium japonicum USDA 110]
dbj|BAC50169.1| NADH ubiquinone oxidoreductase chain N [Bradyrhizobium japonicum USDA 110]
(478 aa)

Score: 265 bits (676), Expect: 4.67523e-68
Length: 448, Idn/Pos/Gap = 151/250/35 (33%/55%/7%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT-----PD  68
           +PEL L +    LL+ G +                    V T   +L +++       P 
Sbjct:  14 LPELVLAVGAMALLMLGAYRGQETTK------------TVTTLAILLLIVVGVLEYMLPA  61

Query:  69 FLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISN--ISLEKLNVFEFFLLFILSILS 126
                F   F  ++  +++K I  L+G   V LV+S   +S     +FE+ +L +LS L 
Sbjct:  62 GKQVTFGGSFIVDDFARFMK-ILALIG-SAVTLVLSTEFLSDPSRRIFEYAILVLLSTLG 119

Query: 127 IFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIA 186
           + ++IS  DL+S+Y+ LE+++L  YV+A+  R +  STEAGLKYF+LG  S+G+LL+G +
Sbjct: 120 MMVLISAGDLISLYLGLELMSLALYVVASSNRDNAKSTEAGLKYFVLGALSSGMLLYGSS 179

Query: 187 LIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPD 246
           L+YG  G  +F  ++                  L+ GLVF+     FK+SA PFHMW+PD
Sbjct: 180 LVYGFTGTVSFTGIAAT---------ATTANVGLVFGLVFLLAGLCFKVSAVPFHMWTPD 230

Query: 247 VYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAF 306
           VYEG  T +   F    K+    +F  +  T+   + + WQ++ +  A  S+ LG+F A 
Sbjct: 231 VYEGAPTPVTAFFASAPKVAALAVFTRVTLTAFPGIVSQWQQILVFVAIASMALGSFAAI 290

Query: 307 AQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFR 366
            Q+  KR +AYSSI H+GF ++ ++S    G   ++ Y++IY+ + LG F+ +L+++  R
Sbjct: 291 GQSNIKRLMAYSSIGHMGFALVGLASGTVEGAQGVLMYIVIYVAMTLGSFSIILAMK--R 348

Query: 367 NYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLY 426
           N      +  IS+F  LS+T+P++AF   ++LFS++GIPP+AGFF K  VF+  +K++L+
Sbjct: 349 N---GQAVEQISDFAGLSRTNPLLAFMFAMLLFSLAGIPPLAGFFAKWYVFVAAIKANLF 405

Query: 427 SLVIFAITISCLATFYYIRIIKIIYFDN 454
           +L +  +  S +  +YY+ I+K +YFD 
Sbjct: 406 TLAVIGVLSSVVGAYYYLAIVKTMYFDE 433

ref|YP_005609634.1| NADH ubiquinone oxidoreductase chain N [Bradyrhizobium japonicum USDA 6]
dbj|BAL10046.1| NADH ubiquinone oxidoreductase chain N [Bradyrhizobium japonicum USDA 6]
(478 aa)

Score: 265 bits (676), Expect: 4.8744e-68
Length: 390, Idn/Pos/Gap = 144/233/18 (36%/59%/4%)

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISN--ISLEKLNVFEFFLLFILSI 124
           P      F   F  ++  +++K I  L+G   V LV+S   +S     +FE+ +L +LS 
Sbjct:  60 PAGKHVTFGGSFIVDDFARFMK-ILALIG-SAVTLVLSTEFLSDPSRRIFEYAILVLLST 117

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           L + ++IS  DL+S+Y+ LE+++L  YV+A   R +  STEAGLKYF+LG  S+G+LL+G
Sbjct: 118 LGMMVLISAGDLISLYLGLELMSLALYVVAASNRDNAKSTEAGLKYFVLGALSSGMLLYG 177

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
            +L+YG  G  +F         I    ++  I   L+ GLVF+     FK+SA PFHMW+
Sbjct: 178 SSLVYGFTGTVSFT-------GIAAAATVSNI--GLVFGLVFLLAGLCFKVSAVPFHMWT 228

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +   F    K+    +F  +  T+   + + WQ++ +  A  S+ LG+F 
Sbjct: 229 PDVYEGAPTPVTAFFASAPKVAALAVFTRVTLTAFPGIVSQWQQILVFVAIASMALGSFA 288

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  QT  KR +AYSSI H+GF ++ ++S    G   ++ Y++IY+ + LG F+ +L+++ 
Sbjct: 289 AIGQTNIKRLMAYSSIGHMGFALVGLASGTVEGAQGVLMYIVIYVAMTLGSFSIILAMK- 347

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            RN      +  IS+F  LS+T+P++AF   ++LFS++GIPP+AGFF K  VF+  +K++
Sbjct: 348 -RN---GQAVEQISDFAGLSRTNPLLAFMFAMLLFSLAGIPPLAGFFAKWYVFVAAIKAN 403

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDN 454
           L++L +  +  S +  +YY+ I+K +YFD 
Sbjct: 404 LFTLAVIGVLTSVVGAYYYLSIVKTMYFDE 433

ref|YP_001524597.1| NADH dehydrogenase subunit N [Azorhizobium caulinodans ORS 571]
sp|A8I421.1|NUON_AZOC5 RecName: Full=NADH-quinone oxidoreductase subunit N; AltName: Full=NADH dehydrogenase I subunit N; AltName: Full=NDH-1 subunit N
dbj|BAF87679.1| proton-translocating NADH-quinone oxidoreductase chain N protein [Azorhizobium caulinodans ORS 571]
(476 aa)

Score: 265 bits (676), Expect: 5.16758e-68
Length: 417, Idn/Pos/Gap = 145/237/22 (34%/56%/5%)

Query:  80 FNNSL------KWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
           FN S+      +++K + LL     + + +  ++  +   FE+ +L +L+ L I ++IS 
Sbjct:  65 FNGSMLVDPFARFMKVVALLGAAVSLIMSVDWLNRAQQAKFEYAVLVVLASLGICILISA 124

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            DL+++Y+ LE+++L  YV+A I R S  STEAGLKYF+LG  S+G+LL+G +LIYG  G
Sbjct: 125 GDLIALYLGLELMSLSLYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGASLIYGFTG 184

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
             NF  ++         K      T L+ G+VF+     FK+SA PFHMW+PDVYEG  T
Sbjct: 185 TVNFAGIA---------KVATAPTTGLVFGIVFLFAGLCFKVSAVPFHMWTPDVYEGAPT 235

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F    K+    +F+ +   +L  + + WQ++    +  S+ LG F A  Q   KR
Sbjct: 236 PVTAFFATAPKVAAMAVFVRVAVEALPHVTHSWQQIVTFVSIASMALGAFAAIGQRNIKR 295

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            LAYSSI H+GF ++ +++    G   ++ YM IY+++ LG F  +L++R     +    
Sbjct: 296 LLAYSSIGHMGFALVGLAAGTEQGVTGVLLYMAIYVVMTLGSFTCVLAMR-----RDGRS 350

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
           +  I +   L++T P++A ++  ++FS++GIPP+AGF  K  VFL  +++ LY L +  +
Sbjct: 351 VETIEDLAGLARTKPLMALALAALMFSLAGIPPLAGFVAKYYVFLAAIQAGLYGLAVIGV 410

Query: 434 TISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLII 490
             S +  +YY+R++KI+YFD        +P +     VL+ S L  TFF L P  +I
Sbjct: 411 VASVVGAYYYLRVVKIMYFDEPAEAFDGMPGELKA--VLAVSGLFTTFFFLAPTPLI 465

ref|YP_005418303.1| Proton-translocating NADH-quinone oxidoreductase, chain N [Rhodospirillum photometricum DSM 122]
emb|CCG09333.1| Proton-translocating NADH-quinone oxidoreductase, chain N [Rhodospirillum photometricum DSM 122]
(502 aa)

Score: 264 bits (675), Expect: 6.1572e-68
Length: 503, Idn/Pos/Gap = 159/273/35 (31%/54%/6%)

Query:   7 ISDIYIFIPELYLTLTVFI---LLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLI  63
           ++D    +P L   L  F+   LL+ G+F   +     P + +     V++    +  L+
Sbjct:   2 MTDPLALMPALPEVLMAFLGMGLLMVGVFRKGDTA---PYVCRA----VLVGLALVAALV  54

Query:  64 INTPDFLST--YFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFI 121
           ++ P +      F   F  +   ++ K + L      + L +  +  EK   FEF +L +
Sbjct:  55 VSQPGWREPMLAFGGLFINDGFARFAKLLTLAGAAATLLLALGWLQREKDLRFEFPILVV 114

Query: 122 LSILSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLL 181
            + L + ++IS  DL+++Y+ +E+ +L  YV+A  +R +  STEAG+KYF+LG  ++GLL
Sbjct: 115 FATLGMMIMISAHDLMTLYLGVELQSLALYVIAAYQRDNTRSTEAGVKYFVLGALASGLL 174

Query: 182 LFGIALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFH 241
           L+G+ L+YG  G TNF  L+   ++      +       ++GLVFI     FK+SA PFH
Sbjct: 175 LYGMTLVYGFAGTTNFDGLAEVAKAGPASMGV-------VIGLVFIIAGLAFKVSAVPFH 227

Query: 242 MWSPDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLG 301
           MW+PDVYEG  T +   F +  K+    LF  +           WQ++ ++ A  S+ LG
Sbjct: 228 MWTPDVYEGAPTPVTAFFAVAPKVAALALFARVLMDPFGAYVADWQRILVLIALLSMGLG 287

Query: 302 TFIAFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLS 361
           +F A AQT  KR +AYSSI HVGF ++ +++    G   L+ Y+ IY+++N+G FA ++S
Sbjct: 288 SFAAIAQTNIKRMMAYSSIGHVGFALVGLAAGTTEGIRGLLIYLGIYVVMNVGTFALIVS 347

Query: 362 LRNFRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCL 421
           +R     +    +  I++   L++T P+ A ++ + +FS++GIPP+AGFF K  VF+  +
Sbjct: 348 MR-----RQGQMVESINDLKGLARTQPLNALAMSLFMFSMAGIPPLAGFFGKFYVFMAAI 402

Query: 422 KSSLYSLVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMD-----KSKAFVLSFSV 476
            S LY+L I  +  S +  FYY+RI+K++YFD      +  P+D       ++ +L  + 
Sbjct: 403 NSGLYTLAILGVLASVVGAFYYLRIVKLMYFDE-----VVEPLDVITGVVPRSMILGGAT 457

Query: 477 LLLTFFCLNPNLIINSIYIISTI 499
            +L FF L PN+++      + +
Sbjct: 458 AMLLFF-LVPNILLAGAQRAAEV 479

ref|ZP_09517599.1| NADH:ubiquinone oxidoreductase subunit N [Oceanicola sp. S124]
(478 aa)

Score: 264 bits (675), Expect: 6.58223e-68
Length: 465, Idn/Pos/Gap = 146/254/24 (31%/54%/5%)

Query:   8 SDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTP  67
           +D+ I +PE+ L +   + L+  ++   +K      L+    ++  + F  +L L + + 
Sbjct:   4 ADLNIILPEIILAIFAMLALVGAVYTGKDK------LTAPLTWITALVFV-LLALWVGSR  56

Query:  68 DFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSI 127
           +   T F   F  +   ++ K   LL     + +    ++  ++  FE+ +L  L+++ +
Sbjct:  57 EVGQTAFGGTFNADGFARFAKVAILLSAAAVLVMGQEYLARRQVANFEYPVLVTLAVVGM 116

Query: 128 FLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIAL 187
            +++S  DL+ +Y+ LE+++L  YV+A++RR S  STE+GLKYF+LG  S+G+LL+G +L
Sbjct: 117 MVMVSAGDLIVLYMGLELMSLSLYVVASLRRDSIKSTESGLKYFVLGSLSSGMLLYGASL 176

Query: 188 IYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDV 247
           +YG  G T        F  I++       P  LL GLVF+ +   FK+SA PFHMW+PDV
Sbjct: 177 VYGFSGTT-------LFSGIIEAAGEGHAPLGLLFGLVFMISGLAFKVSAVPFHMWTPDV 229

Query: 248 YEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFA 307
           YEG  T I   F    K+    LF  +  ++   +   WQ++  + +  S+FLG+  A  
Sbjct: 230 YEGAPTPITAFFATAPKVAAMALFARVVHSAFGGITADWQQVIALISVLSMFLGSIAAIG 289

Query: 308 QTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRN 367
           QT  KR +AYSSI H+GF ++ ++S    G  +++ YM IYI++NLG+FA +LS+     
Sbjct: 290 QTNIKRLMAYSSITHMGFALMGLASGTAFGVQAMLIYMAIYIVMNLGVFAFILSME---- 345

Query: 368 YKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYS 427
            +    +  ++   + S  +P  A ++LI++FS++G+PP+ GFF K  V      + L  
Sbjct: 346 -RDGQPVTDLAALNMYSTAYPGRALALLILMFSLAGVPPLVGFFGKFYVLRAAYDAGLVW 404

Query: 428 LVIFAITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVL 472
           L +  +  S +  FYY+RI+  +YF          P+DK ++ +L
Sbjct: 405 LAVLGVIASVIGAFYYLRIVFYMYFGEAG-----EPLDKPRSPLL 444

ref|ZP_11251509.1| NADH-quinone oxidoreductase subunit N [Acidocella sp. MX-AZ02]
gb|EKM99343.1| NADH-quinone oxidoreductase subunit N [Acidocella sp. MX-AZ02]
(474 aa)

Score: 264 bits (675), Expect: 6.69299e-68
Length: 452, Idn/Pos/Gap = 152/252/24 (33%/55%/5%)

Query:   7 ISDIYIFIPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINT  66
           ++++Y  +P L L L   +LL  G+     K    P ++  FG +V++    ++ L+   
Sbjct:   1 MTELYALLPALVLGLGGMVLLTGGVL--AKKSETTPAVT--FGAVVLLAVAAVVNLLA--  54

Query:  67 PDFL--STYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSI 124
           PD L  +  F +  F     ++  T+  L  I  + L +     E +  FE+ +L + ++
Sbjct:  55 PDTLIWNGLFKTSLF----TRFADTLVYLGAIAALILSVDYNKREGIARFEYPILVLFAV 110

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           + +  +IS  D+L++Y+  E+ +L  Y+ A + R +  STEAGLKYF+LG  ++GLL++G
Sbjct: 111 IGMIAMISAADMLTLYLGFELQSLALYICAALARDNLRSTEAGLKYFVLGALASGLLVYG 170

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
           I+L+YG  G TNF  L   F+S              + G+VF+     FK+SAAPFHMW+
Sbjct: 171 ISLVYGFAGTTNFAALGEVFRSGTAG-------VGTIAGVVFVLVGIAFKISAAPFHMWA 223

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  TS+  LF    K     LF+++       L   W  L  I A  S+ +G   
Sbjct: 224 PDVYEGAPTSVTALFATAPKAAAMALFLSVMAGPFGHLTGQWSALIQILAVLSMVIGALA 283

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  Q+  KR LAYSSI+H+G+ ++ +++   +G  + + Y+ IY++++ G+F  ++++R 
Sbjct: 284 AIGQSNIKRLLAYSSISHMGYALMGLATGTVDGIQASLVYIAIYVVMSFGVFGCVVAMR- 342

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            RN      +  IS+   L+  HP  AF++ + ++S++GIPP+AGFF KL VF T   + 
Sbjct: 343 -RN---GQSVEKISDLAGLASEHPGFAFAMAVFMWSMAGIPPLAGFFAKLYVFATAFNAG 398

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDNCN 456
           L +L I  I  S ++ FYY+R+IK++YFD   
Sbjct: 399 LDTLTIIGIVASVVSAFYYLRVIKVMYFDKGQ 430

ref|ZP_09648931.1| proton-translocating NADH-quinone oxidoreductase, chain N [Bradyrhizobium sp. WSM471]
gb|EHR03689.1| proton-translocating NADH-quinone oxidoreductase, chain N [Bradyrhizobium sp. WSM471]
(478 aa)

Score: 264 bits (675), Expect: 6.97812e-68
Length: 390, Idn/Pos/Gap = 144/234/18 (36%/60%/4%)

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISN--ISLEKLNVFEFFLLFILSI 124
           P      F   F  ++  +++K I  L+G   V LV+S   +S     +FE+ +L +LS 
Sbjct:  60 PAGKHVTFGGSFIVDDFARFMK-ILALIG-SAVTLVLSTEFLSDPSRRIFEYAILVLLST 117

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           L + ++IS  DL+S+Y+ LE+++L  YV+A   R +  STEAGLKYF+LG  S+G+LL+G
Sbjct: 118 LGMMVLISAGDLISLYLGLELMSLALYVVAASNRDNAKSTEAGLKYFVLGALSSGMLLYG 177

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
            +LIYG  G       ++ F  I    +I  +   L+ GLVF+     FK+SA PFHMW+
Sbjct: 178 SSLIYGFTG-------TVAFTGIAAAATISNV--GLVFGLVFLLAGLCFKVSAVPFHMWT 228

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +   F    K+    +F  +  T+   + + WQ++ +  A  S+ LG+F 
Sbjct: 229 PDVYEGAPTPVTAFFASAPKVAALAVFTRVTLTAFPGIVSQWQQILVFVAIASMALGSFA 288

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  Q+  KR +AYSSI H+GF ++ +++    G   ++ Y++IY+ + LG FA +L+++ 
Sbjct: 289 AIGQSNIKRLMAYSSIGHMGFALVGLAAGTVEGAQGVLMYIVIYVAMTLGSFAIILAMK- 347

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            RN      +  IS+F  LS+T+P++AF   ++LFS++GIPP+AGFF K  VF+  +K++
Sbjct: 348 -RN---GQPVEQISDFAGLSRTNPLLAFMFAMLLFSLAGIPPLAGFFAKWYVFVAAIKAN 403

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFDN 454
           L++L +  +  S +  +YY+ I+K +YFD 
Sbjct: 404 LFTLAVIGVLTSVVGAYYYLSIVKTMYFDE 433

ref|ZP_10897797.1| NADH-ubiquinone oxidoreductase chain N [Rhodovulum sp. PH10]
gb|EJW11840.1| NADH-ubiquinone oxidoreductase chain N [Rhodovulum sp. PH10]
(478 aa)

Score: 264 bits (675), Expect: 7.15499e-68
Length: 480, Idn/Pos/Gap = 151/256/25 (31%/53%/5%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PE+ L +    L++ G +               F  +++I    ++FL+   PD     
Sbjct:  14 MPEIVLAVGALCLIVIGAYRGNRATSAL----SGFAVMLLIAAGVLVFLM---PDERVET  66

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISN-ISLEKLNVFEFFLLFILSILSIFLIIS 132
           F   F  +   ++ K +  LVG     L+  + +   +   FE+ +L +LS   + ++IS
Sbjct:  67 FGGSFVVDAYARYFK-LLALVGSAVAILMSGDFLDSPERQRFEYPVLIVLSTTGMLMLIS 125

Query: 133 TFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCI 192
             DL+++Y+ LE+++L  YV+A I R    STEAGLKYF+LG  S+G+LL+G +L+YG  
Sbjct: 126 AADLIALYLGLELMSLALYVVAAIDRDRVKSTEAGLKYFVLGALSSGMLLYGASLVYGST 185

Query: 193 GITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTL 252
           G  +F  ++         +        +  GLVF+     FK+SA PFHMW+PDVYEG  
Sbjct: 186 GTVSFAGIA---------QGAATGGLGVTFGLVFLLAGLCFKVSAVPFHMWTPDVYEGAP 236

Query: 253 TSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFK 312
           T I   F    KI    +F+ L  T+   +   WQ++ +  +  S+ LG+F A  QT  K
Sbjct: 237 TPITAFFAAAPKIAAMAVFVRLAVTAFPTIVPQWQQIVVFVSIASMALGSFAAIGQTNIK 296

Query: 313 RFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNH 372
           R +AYSSI H+G+ +I +++    G   ++ YM IY+ + LG FA ++S++     +   
Sbjct: 297 RLMAYSSIGHMGYALIGLAAGTAEGVQGVMVYMAIYVAMTLGTFAVIISMK-----RDGV 351

Query: 373 QIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFA 432
            +  IS+ + L  T P + F + +++FS++GIPP+AGFF K  VFL  + + LY+L +  
Sbjct: 352 ALEKISDLSGLGWTKPGVGFLLAMMMFSLAGIPPLAGFFAKFYVFLAAVNAGLYTLAVIG 411

Query: 433 ITISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCLNPNLIINS 492
           +  S +  +YY+ I+K++YFD     L   PM      VL+ + + +  F + P  ++++
Sbjct: 412 VLTSVVGAYYYLAIVKVMYFDEPAPAL--APMRGELGVVLAVTGVFVLLFWVWPAPLVDA 469

ref|YP_007305307.1| proton-translocating NADH-quinone oxidoreductase, chain N [Mesorhizobium australicum WSM2073]
gb|AGB45931.1| proton-translocating NADH-quinone oxidoreductase, chain N [Mesorhizobium australicum WSM2073]
(478 aa)

Score: 264 bits (675), Expect: 7.52231e-68
Length: 470, Idn/Pos/Gap = 156/257/22 (33%/54%/4%)

Query:  15 PELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTYF  74
           PEL L +    LL+ G +  +N        +   G  V +      +LI +      + +
Sbjct:  14 PELILAIGALALLMVGAYSRSNT------ANTVTGLAVAVLVIAGAWLIFHAGQ--GSAY  65

Query:  75 PSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIISTF 134
            + F  ++  +++K + L+     + + +     E+ + FE+ +L +L  L + L+IS  
Sbjct:  66 GNAFIQDSFARFMKVLALIGSAVTLIMSMRFAKAERFDKFEYPVLILLCTLGMMLMISAN 125

Query: 135 DLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIGI 194
            ++ +Y+ LE+ +L  YVLA I R +  STEAGLKYF+LG  S+G+LL+GI+L+YG  G 
Sbjct: 126 GMIGLYLGLELQSLAIYVLAAINRDNLRSTEAGLKYFVLGALSSGMLLYGISLVYGYTGN 185

Query: 195 TNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLTS 254
           T F       Q I       E    L++GLVF+     FK+SA PFHMW+PDVYEG  T 
Sbjct: 186 TGF-------QEIATALGGGERQLGLVVGLVFVLAGLAFKISAVPFHMWTPDVYEGAPTP 238

Query: 255 IITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKRF 314
           +        K+    L + +   +   + + WQ++ +  +  S+ LG+F A  QT  KR 
Sbjct: 239 VTAFLAAAPKMAAMALIVRVTMGAFKPIASDWQQIIVFISIASMALGSFAAIGQTNIKRL 298

Query: 315 LAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQI 374
           +AYSSI H+G+ ++ +++ +  G   +  YM+IY+++ LG FA +L++R     +    +
Sbjct: 299 MAYSSIGHMGYALVGLAANSQAGVRGVAIYMLIYLVMTLGTFAFILAMR-----RKEGNV 353

Query: 375 RYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAIT 434
             IS+   LS T+PI+A  + I++FS++GIPP+AGF+ K  VFL  + ++LY+L I  + 
Sbjct: 354 EQISDLAGLSSTNPIMATILTILMFSLAGIPPLAGFWGKWYVFLAAINANLYALAIIGVL 413

Query: 435 ISCLATFYYIRIIKIIYFDNCNVWLIYVPMDKSKAFVLSFSVLLLTFFCL 484
            S +  +YY+RIIKI++FD       +VPM      VL  S   + F+ L
Sbjct: 414 ASVVGAYYYLRIIKIMWFDEPVGG--FVPMASELRVVLGVSGAFVLFYVL 461

ref|YP_005450590.1| NADP ubiquinone oxidoreductase chain N [Bradyrhizobium sp. S23321]
dbj|BAL76478.1| NADP ubiquinone oxidoreductase chain N [Bradyrhizobium sp. S23321]
(478 aa)

Score: 264 bits (675), Expect: 7.71298e-68
Length: 389, Idn/Pos/Gap = 142/233/18 (36%/59%/4%)

Query:  67 PDFLSTYFPSFFFFNNSLKWIKTIFLLVGICYVFLVISN--ISLEKLNVFEFFLLFILSI 124
           P      F   F  ++  +++K I  L+G   V L++S   +S     +FE+ +L +LS 
Sbjct:  60 PAGKQVTFGGSFIVDDFARFMK-ILALIG-SGVTLILSTEFLSDPSRRIFEYAILVLLST 117

Query: 125 LSIFLIISTFDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFG 184
           L + ++IS  DL+S+Y+ LE+++L  YV+A   R +  STEAGLKYF+LG  S+G+LL+G
Sbjct: 118 LGMMVLISAGDLISLYLGLELMSLALYVVAASNRDNAKSTEAGLKYFVLGALSSGMLLYG 177

Query: 185 IALIYGCIGITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWS 244
            +LIYG  G  +F         I    ++  +   L+ GLVF+     FK+SA PFHMW+
Sbjct: 178 SSLIYGFTGTVSFT-------GIAAAATVSNV--GLVFGLVFLLAGLCFKVSAVPFHMWT 228

Query: 245 PDVYEGTLTSIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFI 304
           PDVYEG  T +   F    K+    +F  +  T+   + + WQ++ +  A  S+ LG+F 
Sbjct: 229 PDVYEGAPTPVTAFFASAPKVAALAVFTRVTLTAFPGIVSQWQQILVFVAIASMALGSFA 288

Query: 305 AFAQTKFKRFLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRN 364
           A  QT  KR +AYSSI H+GF ++ ++S    G   ++ Y++IY+ + LG F+ +L+++ 
Sbjct: 289 AIGQTNIKRLMAYSSIGHMGFALVGLASGTLEGAQGVVMYIVIYVAMTLGSFSIILAMK- 347

Query: 365 FRNYKFNHQIRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSS 424
            RN      +  IS+F  LS+T+P++AF   ++LFS++G+PP+AGFF K  VF+  +K++
Sbjct: 348 -RN---GQAVEQISDFAGLSRTNPLLAFMFAMLLFSLAGVPPLAGFFGKWYVFVAAIKAN 403

Query: 425 LYSLVIFAITISCLATFYYIRIIKIIYFD 453
           L++L +  +  S +  +YY+ I+K +YFD
Sbjct: 404 LFTLAVIGVLTSVVGAYYYLSIVKTMYFD 432

ref|YP_004108888.1| proton-translocating NADH-quinone oxidoreductase subunit N [Rhodopseudomonas palustris DX-1]
gb|ADU44155.1| proton-translocating NADH-quinone oxidoreductase, chain N [Rhodopseudomonas palustris DX-1]
(479 aa)

Score: 263 bits (673), Expect: 1.06793e-67
Length: 441, Idn/Pos/Gap = 151/246/20 (34%/55%/4%)

Query:  14 IPELYLTLTVFILLIYGIFYSTNKYYGYPILSKNFGYLVVITFTYILFLIINTPDFLSTY  73
           +PEL L +   +LL+ G F          +L+     ++++  T  L L    P  L T+
Sbjct:  14 LPELVLVVGAMLLLMLGAFRGPKSTGTITVLA-----ILLLLATGALELFALPPGRLVTF  68

Query:  74 FPSFFFFNNSLKWIKTIFLLVGICYVFLVISNISLEKLNVFEFFLLFILSILSIFLIIST 133
             SF   ++  +++K + L+     + L +  ++     +FE+ +L +LS   + L+IS 
Sbjct:  69 GGSFIV-DDFARFLKVLALIGSAVTLILSLEVLTDPSRRMFEYAILVLLSSAGMLLLISA 127

Query: 134 FDLLSIYISLEMLNLIFYVLATIRRTSEFSTEAGLKYFILGVFSTGLLLFGIALIYGCIG 193
            DL+ +Y+ LE+++L  YV+A   R    S EAG+KYF+LG  S+G+LL+G +LIYG  G
Sbjct: 128 GDLIMLYLGLELMSLALYVVAASNRKDAKSNEAGMKYFVLGALSSGMLLYGASLIYGFTG 187

Query: 194 ITNFIDLSLFFQSIMKEKSILEIPTDLLLGLVFISTAFFFKLSAAPFHMWSPDVYEGTLT 253
              F  ++    +  K+ +I      L+ GLVF+     FK+SA PFHMW+PDVYEG  T
Sbjct: 188 TVEFAGIA----AAAKDGNI-----GLVFGLVFLLAGLCFKVSAVPFHMWTPDVYEGAPT 238

Query: 254 SIITLFIIFTKITIFFLFINLFGTSLFELFNVWQKLTLICAFFSLFLGTFIAFAQTKFKR 313
            +   F    K+    +F  +  T+   +   WQ++ +  A  S+ LG+F A  Q   KR
Sbjct: 239 PVTAFFASAPKVAGLAIFTRVTLTAFPGIVPQWQQIVVFVAIASMALGSFAAIGQKNIKR 298

Query: 314 FLAYSSINHVGFIMIAVSSINYNGFYSLIFYMMIYILINLGIFASLLSLRNFRNYKFNHQ 373
            +AYS+I H+GF ++ +S+    G   +I Y+ IY+ + LG FA +L++R  RN      
Sbjct: 299 LMAYSAIGHIGFALVGLSAGTVEGAQGVIVYISIYVAMTLGAFAVILAMR--RN---GMH 353

Query: 374 IRYISEFTILSKTHPIIAFSILIILFSISGIPPIAGFFTKLIVFLTCLKSSLYSLVIFAI 433
           +  I +F  LS+T+P +AF   ++LFS++GIPP+AGFF K  VF+  +K+ L+ L +  +
Sbjct: 354 VETIGDFAGLSRTNPPLAFFFAMLLFSLAGIPPLAGFFAKFYVFMAAIKAGLFVLAVIGV 413

Query: 434 TISCLATFYYIRIIKIIYFDN 454
             S +  +YY+ IIK +YFD 
Sbjct: 414 VCSVVGAYYYLAIIKTMYFDE 434

Cyanidioschyzon merolae Genome Project v3