CMW028C (620 aa)
by blastp 2.2.20 [Feb-08-2009] against nr [Jan-30-2013] (XML result)
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cytochrome C-type biogenesis protein CCMF [Cyanidioschyzon merolae] |
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cytochrome c-type synthesis protein cycK [Mesorhizobium alhagi CCNWXJ12-2] |
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cytochrome c-type biogenesis protein [gamma proteobacterium HdN1] |
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cytochrome c-type biogenesis protein CcmF [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] |
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cytochrome c-type biogenesis protein CcmF [gamma proteobacterium NOR51-B] |
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cytochrome c-type biogenesis protein CcmF [Legionella longbeachae D-4968] |
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cytochrome C-type biogenesis protein CcmF [Legionella longbeachae NSW150] |
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cytochrome c-type biogenesis transmembrane protein [Hoeflea phototrophica DFL-43] |
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cytochrome C biogenesis protein CcmF [Haemophilus somnus 2336] |
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Cytochrome c heme lyase subunit CcmF [gamma proteobacterium IMCC1989] |
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cytochrome c-type biogenesis protein F [Haemophilus somnus 129PT] |
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cytochrome c-type biogenesis protein CcmF [Ochrobactrum intermedium M86] |
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cytochrome c-type biogenesis protein CcmF [Colwellia psychrerythraea 34H] |
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cytochrome c-type biogenesis protein ccmF [Pseudoalteromonas tunicata D2] |
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cytochrome C biogenesis protein ccmF [Pseudoalteromonas spongiae UST010723-006] |
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cytochrome c-type biogenesis protein CcmF [Rickettsiella grylli] |
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cytochrome c-type biogenesis protein CcmF [Bartonella sp. DB5-6] |
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cytochrome C-type biogenesis protein [Bartonella rochalimae ATCC BAA-1498] |
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cytochrome c-type biogenesis protein CcmF [Kangiella koreensis DSM 16069] |
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cytochrome c-type biogenesis protein CcmF [Thiocapsa marina 5811] |
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Cytochrome C-type biogenesis protein CcmF [gamma proteobacterium HIMB30] |
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cytochrome c-type biogenesis protein CcmF [Simiduia agarivorans SA1 = DSM 21679] |
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cytochrome c-type biogenesis protein CcmF [Ochrobactrum intermedium LMG 3301] |
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cytochrome c-type biogenesis protein CcmF [Bartonella tamiae Th239] |
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cytochrome c-type biogenesis protein CcmF [Bartonella taylorii 8TBB] |
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Cytochrome c-type biogenesis protein CcmF [Neptuniibacter caesariensis] |
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cytochrome c-type biogenesis heme lyase CycK [Hyphomicrobium sp. MC1] |
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cytochrome c-type biogenesis protein CcmF [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] |
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Cytochrome c heme lyase subunit CcmF [Caenispirillum salinarum AK4] |
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cytochrome c-type biogenesis protein CcmF [Legionella drancourtii LLAP12] |
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cytochrome c-type biogenesis protein CycK [Dinoroseobacter shibae DFL 12] |
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cytochrome c-type biogenesis protein CcmF [Nitratireductor indicus C115] |
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cytochrome c-type biogenesis protein CcmF [Salinisphaera shabanensis E1L3A] |
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cytochrome C-type biogenesis protein [Bartonella sp. 1-1C] |
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cytochrome c-type biogenesis protein CcmF [Mesorhizobium opportunistum WSM2075] |
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c-type cytochrome biogenesis protein CcmF [Beggiatoa alba B18LD] |
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cytochrome c-type biogenesis protein CcmF [Polynucleobacter necessarius subsp. necessarius STIR1] |
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cytochrome c-type biogenesis protein CcmF [Alcanivorax sp. W11-5] |
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cytochrome c-type biogenesis protein CcmF [marine gamma proteobacterium HTCC2143] |
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cytochrome c-type biogenesis protein CcmF [Alcanivorax sp. DG881] |
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cytochrome c-type biogenesis protein CcmF [Paracoccus sp. TRP] |
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cytochrome c-type biogenesis protein CcmF [Alcanivorax dieselolei B5] |
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cytochrome C biogenesis protein CcmF [Teredinibacter turnerae T7901] |
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hypothetical protein IMCC14465_04350 [alpha proteobacterium IMCC14465] |
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cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20311] |
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cytochrome C biogenesis protein ccmF [Pseudoalteromonas rubra ATCC 29570] |
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cytochrome c-type biogenesis protein CcmF [Pseudomonas sp. S9] |
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cytochrome c-type biogenesis protein CcmF [Stappia aggregata IAM 12614] |
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cytochrome c-type biogenesis protein CcmF [Allochromatium vinosum DSM 180] |
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cytochrome C biogenesis protein ccmF [Pseudoalteromonas marina mano4] |
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cytochrome C-type biogenesis protein [Bartonella sp. AR 15-3] |
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cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20480] |
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c-type cytochrome biogenesis protein CcmF [Mesorhizobium australicum WSM2073] |
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cytochrome c-type biogenesis protein CcmF [Brucella sp. NVSL 07-0026] |
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cytochrome c-type biogenesis protein CcmF [Bartonella birtlesii LL-WM9] |
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hypothetical protein ROS217_02975 [Roseovarius sp. 217] |
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cytochrome c-type biogenesis protein cyck [Bartonella henselae str. Houston-1] |
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cytochrome c-type biogenesis protein CcmF [Bartonella washoensis Sb944nv] |
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cytochrome c-type biogenesis protein ccmF [Marinobacter hydrocarbonoclasticus ATCC 49840] |
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heme lyase subunit CcmF [Providencia sneebia DSM 19967] |
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c-type cytochrome biogenesis protein CcmF [Enterobacteriaceae bacterium strain FGI 57] |
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cytochrome c-type biogenesis protein CcmF [Aggregatibacter aphrophilus NJ8700] |
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cytochrome c-type biogenesis protein CcmF [Rhizobium sp. PDO1-076] |
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cytochrome c-type biogenesis protein CcmF [gamma proteobacterium NOR5-3] |
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cytochrome c-type biogenesis protein CcmF [Marinobacter aquaeolei VT8] |
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cytochrome c-type biogenesis protein CcmF [Bartonella washoensis 085-0475] |
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cytochrome c-type biogenesis protein CcmF [Marinobacter algicola DG893] |
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cytochrome c-type biogenesis protein CcmF [Pseudomonas stutzeri DSM 10701] |
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cytochrome c-type biogenesis protein CcmF [Bartonella vinsonii subsp. arupensis Pm136co] |
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cytochrome c-type biogenesis protein CcmF [Legionella pneumophila 2300/99 Alcoy] |
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CcmF [Legionella pneumophila 130b] |
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cytochrome C-type biogenesis protein CcmF [Mesorhizobium ciceri biovar biserrulae WSM1271] |
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cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20429] |
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cytochrome c-type biogenesis protein CcmF [Roseovarius nubinhibens ISM] |
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cytochrome c-type biogenesis protein CcmF [Pseudomonas sp. M47T1] |
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cytochrome C biogenesis protein CcmF [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
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cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. Anand1_goat] |
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protein CcmF [Pasteurella multocida subsp. multocida str. Pm70] |
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cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. P52VAC] |
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cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20652] |
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cytochrome c biogenesis factor [Idiomarina xiamenensis 10-D-4] |
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cytochrome C-type biogenesis protein [Bartonella clarridgeiae 73] |
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cytochrome C-type biogenesis protein [Bartonella tribocorum CIP 105476] |
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cytochrome c-type biogenesis protein CcmF [Yokenella regensburgei ATCC 43003] |
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cytochrome C biogenesis protein CcmF [Pseudoxanthomonas suwonensis 11-1] |
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cytochrome C-type biogenesis protein CcmF [Congregibacter litoralis KT71] |
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heme lyase, CcmF subunit [Escherichia fergusonii ATCC 35469] |
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cytochrome C biogenesis protein ccmF [Pseudoalteromonas arctica A 37-1-2] |
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Cytochrome c assembly protein [Beggiatoa sp. PS] |
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c-type cytochrome biogenesis protein CcmF [gamma proteobacterium HIMB55] |
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cytochrome c assembly protein [Maricaulis maris MCS10] |
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cytochrome c-type biogenesis protein CcmF [Rahnella sp. Y9602] |
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cytochrome c-type biogenesis protein CcmF [Methylomonas methanica MC09] |
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cytochrome c-type biogenesis protein CcmF [endosymbiont of Tevnia jerichonana (vent Tica)] |
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cytochrome c-type biogenesis protein CcmF [Rubrivivax benzoatilyticus JA2] |
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cytochrome c-type biogenesis protein ccmf [Haemophilus influenzae F3031] |
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Cytochrome c heme lyase subunitcmF [Pasteurella multocida subsp. gallicida P1059] |
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cytochrome C biogenesis protein ccmF [Pseudoalteromonas citrea NCIMB 1889] |
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Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M19501] |
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Cytochrome c biogenesis factor [Roseovarius sp. TM1035] |
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cytochrome c-type biogenesis protein CcmF [Bartonella doshiae NCTC 12862] |
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cytochrome C-type biogenesis protein [Haemophilus influenzae 7P49H1] |
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heme lyase, CcmF subunit [Legionella pneumophila subsp. pneumophila] |
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cytochrome C-type biogenesis protein [Haemophilus influenzae PittEE] |
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putative cytochrome c-type biogenesis protein [Yersinia enterocolitica subsp. enterocolitica 8081] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12E] |
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cytochrome C-type biogenesis protein [Haemophilus influenzae 22.1-21] |
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cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae 86-028NP] |
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cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. HN06] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli 97.0259] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE147] |
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cytochrome C-type biogenesis protein CcmF [Legionella pneumophila str. Lens] |
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cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-272] |
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cytochrome c-type biogenesis protein [Escherichia coli SE15] |
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cytochrome c-type biogenesis protein CcmF [Yersinia enterocolitica subsp. enterocolitica WA-314] |
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cytochrome c-type biogenesis protein CycK [Bartonella bacilliformis KC583] |
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cytochrome c-type biogenesis protein CcmF [Legionella pneumophila subsp. pneumophila ATCC 43290] |
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cytochrome c maturation heme lyase subunit CcmF [Haemophilus influenzae R2846] |
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cytochrome c-type biogenesis protein CcmF [Rhodoferax ferrireducens T118] |
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c-type cytochrome biogenesis protein CcmF [Rahnella aquatilis CIP 78.65 = ATCC 33071] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli 3030-1] |
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hypothetical protein MED193_02350 [Roseobacter sp. MED193] |
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cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae PittHH] |
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cytochrome C-type biogenesis protein CcmF [Fluoribacter dumoffii Tex-KL] |
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cytochrome c heme lyase subunit CcmF [Pelagibacterium halotolerans B2] |
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cytochrome c-type biogenesis protein CcmF [Legionella pneumophila str. Corby] |
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cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. Bsw20308] |
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cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae R3021] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12B] |
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cytochrome C-type biogenesis protein [Haemophilus influenzae PittAA] |
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cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20495] |
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cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae NT127] |
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Cytochrome c-type biogenesis protein ccmF [Pseudomonas fluorescens WH6] |
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cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae 3655] |
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cytochrome c-type biogenesis protein CcmF [Shigella flexneri 1485-80] |
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hypothetical protein A936_16077 [Enterobacter sp. Ag1] |
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cytochrome c-type biogenesis protein CcmF [Pasteurella dagmatis ATCC 43325] |
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heme lyase, CcmF subunit, partial [Escherichia coli O157:H43 str. T22] |
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cytochrome c-type biogenesis protein CcmF [Agrobacterium vitis S4] |
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cytochrome c-type biogenesis protein CcmF [Glaciecola punicea DSM 14233 = ACAM 611] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli E24377A] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli 1827-70] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8B] |
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cytochrome C biogenesis protein CcmF [Pseudoalteromonas sp. SM9913] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli HS] |
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Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M21127] |
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cytochrome C biogenesis protein CcmF [Haemophilus influenzae F3047] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli 99.0741] |
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cytochrome c-type biogenesis protein CcmF [SAR86 cluster bacterium SAR86A] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli B185] |
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cytochrome c-type biogenesis protein CycK [Bartonella grahamii as4aup] |
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cytochrome c-type biogenesis protein [Shigella sonnei Ss046] |
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cytochrome c-type biogenesis protein CcmF [Shigella sonnei str. Moseley] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli TW10509] |
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Cytochrome c-type biogenesis protein ccmF [Escherichia coli P12b] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5A] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE216] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli 5412] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli UMNK88] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 146-1] |
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heme lyase, CcmF subunit [Escherichia coli NC101] |
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cytochrome c-type biogenesis protein CcmF [Serratia sp. AS12] |
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cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20439] |
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heme lyase, CcmF subunit [Haemophilus influenzae 10810] |
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Cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H- str. 493-89] |
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cytochrome c-type biogenesis protein CcmF [Pasteurella multocida 36950] |
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cytochrome C-type biogenesis protein [Haemophilus influenzae Rd KW20] |
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cytochrome c-type biogenesis protein [Shigella sonnei 53G] |
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cytochrome c-type biogenesis protein CcmF [Brucella ceti M13/05/1] |
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cytochrome C biogenesis protein [Escherichia coli O157:H7 str. EDL933] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli TA280] |
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Cytochrome c-type bioproteinsis protein ccmF [Yersinia frederiksenii ATCC 33641] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli O103:H25 str. CVM9340] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 69-1] |
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cytochrome c-type biogenesis protein [Escherichia coli O157:H7 str. Sakai] |
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Cytochrome c-type biogenesis protein CcmF precursor [Laribacter hongkongensis HLHK9] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1D] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3B] |
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c-type cytochrome biogenesis protein CcmF [SAR116 cluster alpha proteobacterium HIMB100] |
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cytochrome C biogenesis protein ccmF [Pseudoalteromonas piscicida JCM 20779] |
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c-type cytochrome biogenesis protein CcmF [Rhizobium sp. CF142] |
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hypothetical protein SOD_c05180 [Serratia odorifera 4Rx13] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE75] |
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Cytochrome c-type bioproteinsis protein ccmF [Yersinia kristensenii ATCC 33638] |
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cytochrome c-type biogenesis protein cycK [Bartonella quintana RM-11] |
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cytochrome c-type biogenesis protein CcmF [Shigella boydii 5216-82] |
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Cytochrome c-type biogenesis protein CcmF [Rhodospirillum photometricum DSM 122] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE94] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE144] |
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Cytochrome c-type biogenesis protein ccmF [Escherichia coli LF82] |
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cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-315] |
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heme lyase, CcmF subunit [Escherichia coli str. K-12 substr. MG1655] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_7v] |
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Cytochrome c heme lyase subunit CcmF [Escherichia coli WV_060327] |
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Cytochrome c heme lyase subunit CcmF [Shigella boydii ATCC 9905] |
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cytochrome c-type biogenesis protein CcmF [Pseudomonas syringae pv. aceris str. M302273] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli W26] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 196-1] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli 53638] |
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c-type cytochrome biogenesis protein CcmF, partial [Rhizobium sp. CF080] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE146] |
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cytochrome C biogenesis protein ccmF [Pseudoalteromonas flavipulchra JG1] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli B354] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE50] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli N1] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli 4_1_47FAA] |
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cytochrome c-type biogenesis protein CcmF [Shigella flexneri J1713] |
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cytochrome c-type biogenesis protein CcmF [Actinobacillus succinogenes 130Z] |
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cytochrome c-type biogenesis protein CcmF, partial [Escherichia coli MS 45-1] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli B093] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 185-1] |
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cytochrome c-type biogenesis protein CcmF [Pseudomonas sp. M1] |
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cytochrome c-type biogenesis protein [Shigella flexneri 2a str. 301] |
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cytochrome C-type biogenesis protein [Escherichia coli 042] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli 07798] |
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cytochrome c-type biogenesis protein CcmF [Serratia sp. M24T3] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 124-1] |
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heme lyase, CcmF subunit [Escherichia coli UMN026] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_C165-02] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE45] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli 3431] |
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heme lyase CcmF [Escherichia coli IAI39] |
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c-type cytochrome biogenesis protein CcmF [Thiorhodovibrio sp. 970] |
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heme lyase, CcmF subunit [Escherichia sp. TW09308] |
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cytochrome c-type biogenesis protein ccmF [Escherichia coli CFT073] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_MHI813] |
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cytochrome c-type biogenesis protein CcmF, partial [Escherichia coli MS 16-3] |
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cytochrome c-type biogenesis protein CcmF, partial [Escherichia coli MS 57-2] |
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cytochrome c-type biogenesis protein [Klebsiella pneumoniae subsp. pneumoniae DSM 30104] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE192] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE56] |
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cytochrome c-type biogenesis protein CcmF [Pseudomonas syringae pv. maculicola str. ES4326] |
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Cytochrome c heme lyase subunit CcmF [Shigella dysenteriae CDC 74-1112] |
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cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus HK386] |
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cytochrome c-type biogenesis protein CcmF, partial [Escherichia coli MS 153-1] |
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cytochrome C-type biogenesis protein [Haemophilus influenzae 6P18H1] |
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cytochrome c-type biogenesis protein cycK [Bartonella quintana str. Toulouse] |
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cytochrome c-type biogenesis protein CcmF [Pseudomonas mendocina DLHK] |
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Cytochrome c biogenesis factor [Pelagibaca bermudensis HTCC2601] |
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cytochrome C-type biogenesis protein CcmF [Mesorhizobium amorphae CCNWGS0123] |
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Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M21621] |
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Cytochrome c-type biogenesis protein cycK [Rhizobium sp.] |
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Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M21639] |
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cytochrome c-type biogenesis protein CcmF [Citrobacter youngae ATCC 29220] |
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cytochrome c-type biogenesis protein CcmF [Shigella flexneri VA-6] |
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cytochrome c-type biogenesis protein CcmF [Pseudomonas mendocina NK-01] |
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cytochrome C biogenesis protein [Pseudomonas fluorescens SBW25] |
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cytochrome c-type biogenesis protein [Shigella dysenteriae Sd197] |
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cytochrome c-type biogenesis protein CcmF [Escherichia coli RN587/1] |
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cytochrome c-type biogenesis protein [Klebsiella pneumoniae subsp. pneumoniae HS11286] |
ref|NP_059365.1| cytochrome C-type biogenesis protein CCMF [Cyanidioschyzon merolae] dbj|BAA36527.1| cytochrome C-type biogenesis protein CCMF [Cyanidioschyzon merolae strain 10D] (620 aa) Score: 1162 bits (3005), Expect: 0.0 Length: 620, Idn/Pos/Gap = 620/620/0 (100%/100%/0%) Query: 1 MFGYVLHFLLIFIFIYSCNFFFLDSFYKYKKVTTLLEIVHHYYFYFNYIYNIIIIIIWLI 60 MFGYVLHFLLIFIFIYSCNFFFLDSFYKYKKVTTLLEIVHHYYFYFNYIYNIIIIIIWLI Sbjct: 1 MFGYVLHFLLIFIFIYSCNFFFLDSFYKYKKVTTLLEIVHHYYFYFNYIYNIIIIIIWLI 60 Query: 61 GIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINK 120 GIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINK Sbjct: 61 GIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINK 120 Query: 121 LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIH 180 LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIH Sbjct: 121 LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIH 180 Query: 181 PPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL Sbjct: 181 PPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV Sbjct: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF 360 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF Sbjct: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF 360 Query: 361 LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWKL 420 LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWKL Sbjct: 361 LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWKL 420 Query: 421 IFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLL 480 IFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLL Sbjct: 421 IFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLL 480 Query: 481 ITIYGEEFILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENI 540 ITIYGEEFILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENI Sbjct: 481 ITIYGEEFILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENI 540 Query: 541 QNVLFSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLG 600 QNVLFSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLG Sbjct: 541 QNVLFSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLG 600 Query: 601 GIFLLDSIIFSLFRCIKNFQ 620 GIFLLDSIIFSLFRCIKNFQ Sbjct: 601 GIFLLDSIIFSLFRCIKNFQ 620
ref|ZP_09296544.1| cytochrome c-type synthesis protein cycK [Mesorhizobium alhagi CCNWXJ12-2] gb|EHK53523.1| cytochrome c-type synthesis protein cycK [Mesorhizobium alhagi CCNWXJ12-2] (664 aa) Score: 207 bits (528), Expect: 9.78606e-51 Length: 586, Idn/Pos/Gap = 158/262/65 (26%/44%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 SDFS+ V E S +P LYK+ W N+EGS+ L + L +++ + F + L Sbjct: 63 SDFSVANVWENSHSLKPMLYKVTGTWGNHEGSMLL-WVLILMLFGALVAVFGSNL----P 117 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNF--TVLEGNELNFLLQDINILIHPPLI 184 T NV + I + LL I + F +EG +LN +LQDI + +HPP++ Sbjct: 118 ATLRANVLAVQGWIG--AAFLLFILATSNPFVRIVDPPIEGRDLNPILQDIGLAVHPPML 175 Query: 185 YISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELGW 242 Y+ Y +S+ FS + LI + + + +R L W + I +GS WAY ELGW Sbjct: 176 YLGYVGFSVCFSFAVAALI-EGRIDAAWARWVRPWTLAAWMFLTGGIAMGSYWAYYELGW 234 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GGFWFWD VE S +PWL ALLHS ++ K +++ +L L + + + ++G LVRS Sbjct: 235 GGFWFWDPVENASFMPWLAGTALLHSAIVMEKRSALKIWTLLLAILTFSLSLLGTFLVRS 294 Query: 303 GLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYI 359 G+L SVH F P+ F++ L F+ L I T ++ V Sbjct: 295 GVLTSVHAFATDPSRGVFILCILTLFIGGSLALFAIRAGSLTAGGVFHPISREGALVLNN 354 Query: 360 FLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN----------------------- 396 L L+ LY P +++ + + FFN Sbjct: 355 LFLTTATATVLVGTLY-PLVVEAVTGDKISVGAPFFNLTFGPLMVPLLVVVPFGPVLAWK 413 Query: 397 ---------KILLLFIGILLTLIIIFLINSWKLIFIFLGI-----IIIGGIRGFPEIFLA 442 +++ F G LL ++++ + +F LGI +I+G + ++ L Sbjct: 414 RGDLYGAGQRLMAAFAGALLAVLVVMMFVDGASVFAALGIGLAVWLILGALT---DLALK 470 Query: 443 LYFFI---YLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLL 499 F +++L L+ + + F + HF L L+ + + +E IL G+T+ Sbjct: 471 SGFGRVSGHVMLHRLVGLPRSVFGTALAHFGVGLTTLGLVGVLSFEQEKILAMRPGETME 530 Query: 500 LNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 + + ++F L NY G F + D ++ L S KRFY + + T Sbjct: 531 IA-GYTLLFDGLTPARGPNYTEERGRFELIDADG-----EAESELVSSKRFYTARQMPTT 584 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 ++ I T S +Y+ LGD + G R+ + P ++ W GG+ ++ Sbjct: 585 EAGIKTIWPSQLYVSLGDPTADGGVVVRVWWKPLVTLIWTGGLVMM 630
ref|YP_003812068.1| cytochrome c-type biogenesis protein [gamma proteobacterium HdN1] emb|CBL46425.1| Cytochrome c-type biogenesis protein [gamma proteobacterium HdN1] (664 aa) Score: 203 bits (517), Expect: 1.84557e-49 Length: 600, Idn/Pos/Gap = 159/267/69 (26%/44%/11%) Query: 53 IIIIIWLIGIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL-GYFLQFIIYF 111 + + I +G L +DF++ +V S+ P YK+ +W +EGSL L G+ L ++ Sbjct: 50 MALAIACLGAAFLQNDFTVQYVARNSNTLLPFWYKISAIWGGHEGSLLLWGFVLS--VWT 107 Query: 112 TFINYFINKLTLIVKLTFFYNVYFIL--FNISFLSLTLLLIFLRFDFFFNFT--VLEGNE 167 + F + V I+ + F S ++F F N EG + Sbjct: 108 AAVALFSRS----IPEPMIARVLAIMGWIGVGFYSF---MLFTSNPFLRNLPDFPAEGAD 160 Query: 168 LNFLLQDINILIHPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIAS 226 LN LLQD+ +++HPP++Y+ Y +S+ F+ + L+ + R + W + Sbjct: 161 LNPLLQDVGLILHPPMLYMGYVGFSVAFAFAIAGLLSGRMDSAWARWSRPWTTVAWCFLT 220 Query: 227 FSILLGSRWAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLG 286 I LGS WAY ELGWGG+WFWD VE S +PWL+ AL+HSL K + + ++ L Sbjct: 221 GGIALGSWWAYYELGWGGWWFWDPVENASFMPWLVGTALIHSLAATEKRGVFKPWTVLLA 280 Query: 287 MAIYFVIIIGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSI 346 + + + ++G LVRSG+L SVH F + P Y+ LVF+ +I L + ++ Sbjct: 281 ILAFSLSLLGTFLVRSGVLTSVHAFASDP----ARGYYILVFLVAVIGGSLTLFAARANV 336 Query: 347 FDLNNHYN-FVYYIFLLV-----ILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILL 400 FD + Y F +FLL+ ++ Y+L P + FFN + Sbjct: 337 FDTESRYETFSREMFLLINNILLMVAAGYVLLGTLAPIFADVLGLGKISIGEPFFNTVAG 396 Query: 401 LFIGILLTLIIIFLINSWK----------LIFIFLGIIIIG-------GIRGFPEIFLAL 443 +L+ L + + +WK L+ F+G I G P + LA Sbjct: 397 PLAALLMLLTGVGPLLNWKRHSVSALLRLLMVAFVGSAIAGVVLVWLLAQEMAPYVVLAT 456 Query: 444 YFFIYLLLFTLILIIKQKF-------------------SFIVYHFNFFFIMLSLLLITIY 484 F +Y + L++ +K +V H F ML + ++ + Sbjct: 457 AFCVYAAVL-LVVDCGRKMRTAKAGLWAGWQRLPRSYRGMLVAHAGFIVSMLGITWVSAF 515 Query: 485 GEEFILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVL 544 E + + G+++++ D + F ++ I NY+ST G F + + + L Sbjct: 516 DVEKDVRLAPGESVVVQD-YRYAFDEVRDIQGPNYVSTEGAFTVYKG------DRVVARL 568 Query: 545 FSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 EKR YL Q + T++ I L D+Y+ LG+ + W RI + P + W W GG+ + Sbjct: 569 TPEKRRYLAQGSVMTEAAIDGGLWRDLYVALGEPLGDGSWAVRIYYKPLMRWVWGGGLIM 628
ref|YP_903525.1| cytochrome c-type biogenesis protein CcmF [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gb|ABL02054.1| cytochrome c-type biogenesis protein CcmF [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] (634 aa) Score: 202 bits (515), Expect: 2.92033e-49 Length: 587, Idn/Pos/Gap = 167/287/62 (28%/48%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+ DFS+ +V S+ P+++K+ +W +EGSL L + L + ++ F +L Sbjct: 62 LVDDFSVKYVANNSNTQLPNIFKMSAVWGAHEGSLLL-WALILTAWSVAVSIFSRRLPDE 120 Query: 125 V-----KLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 V + ++ F+LF LLL F+ + ++G ELN LLQD ++I Sbjct: 121 VLNHILIILGLISIGFLLF--------LLLTSNPFERL-DMVPIQGRELNPLLQDFGLII 171 Query: 180 HPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 HPP++Y+ Y ++ F+ + LI + L R LI W +F I LGS WAY Sbjct: 172 HPPMLYMGYVGMAVPFAFVLSSLIRGQLDSTWLRWSRPWTLIAWAFLTFGITLGSWWAYY 231 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE S +PWL++ AL+HSL ++ K + + ++ L ++ + + ++G Sbjct: 232 ELGWGGWWFWDPVENASFMPWLVATALVHSLSVSEKRGVFKHWTVLLAISGFSLSLLGTF 291 Query: 299 LVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 LVRSG+L SVH+F P + F L+F+ I++ L Y + S+ NN ++F+ Sbjct: 292 LVRSGILTSVHSFAADPARGL----FILIFLVIVVGGSLVLYAWRASLMQSNNTFSFLSR 347 Query: 359 I-------FLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 LLV L LY P L+ + +F+ + + + + L +++ Sbjct: 348 ESGLLVNNVLLVAAMSSVFLGTLY-PLLLDALGLGKISVGAPYFSAVFVPIMILALLVMV 406 Query: 412 IFLINSWK----------LIFIFLGI----IIIGGIRGFPEIFLALYFFIYLLLFTLILI 457 I WK L ++++G+ +I + + LA++ FI++++ +L+L+ Sbjct: 407 IAPFLRWKKDTTQRVAGLLKWVWIGVGLLFVISALLTDNTSVLLAVFLFIWIVMHSLVLL 466 Query: 458 ---IKQKFS-------FIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFIII 507 + QK S I H +L + T YG E + I K + + + I Sbjct: 467 FQRLNQKGSMSFAFIGMIFAHIGIAVFLLGATVTTQYGVEKDIKMDIDKPITIA-GYDFI 525 Query: 508 FRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQ-NVLFSEKRFYLYQSLINTKSIIYTN 566 F+ + H++ NY G H + +EN + + L EKR Y+ + T++ I + Sbjct: 526 FKGVTHLFGQNYQGNKG-------HVEVYFENEKISDLRPEKRQYV-TGMPMTEAAIDPS 577 Query: 567 LMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSLF 613 L D+YI+LG+ + W RI + P I W WLGG+ + + + F Sbjct: 578 LYRDIYIVLGESLENDSWSLRIYYKPLIRWIWLGGLLITLGALLAAF 624
ref|ZP_04956578.1| cytochrome c-type biogenesis protein CcmF [gamma proteobacterium NOR51-B] gb|EED34162.1| cytochrome c-type biogenesis protein CcmF [gamma proteobacterium NOR51-B] (657 aa) Score: 202 bits (513), Expect: 4.98132e-49 Length: 609, Idn/Pos/Gap = 161/275/81 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L DFS+ V S+ PS+YK +W N+EGSL L + L + T + +F L L Sbjct: 62 LQDDFSVKVVASNSNSLLPSVYKFSAVWGNHEGSLLL-WVLILSGWMTAVAFFSRGLPLP 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 V L+ V L + F++ +L F+ + +EGN+LN LLQD ++IHPPL+ Sbjct: 121 V-LSRVLGV-MGLVAVGFIAFSLF-TSNPFERLLPGSPVEGNDLNPLLQDPGLIIHPPLL 177 Query: 185 YISYASYSIIFSISFTILIIKC--KFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGW 242 Y+ Y +S+ F+ + L+ + + + N + W S I+LGS WAY ELGW Sbjct: 178 YMGYVGFSVPFAFAIAALLGGRLDAAWARWSRPWTN-VAWGFLSLGIMLGSWWAYYELGW 236 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GG+WFWD VE S +PWL AL+HSL + K + R ++ L +A + + ++G LVRS Sbjct: 237 GGWWFWDPVENASFMPWLTGTALVHSLAVTEKRGLFRSWTVLLAIAAFSLSLLGTFLVRS 296 Query: 303 GLLQSVHTFVNSPNF-LIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFL 361 G+L SVH F + P L I ++ +V L++ L+ T + + HY + L Sbjct: 297 GVLTSVHAFASDPERGLFILIFLGVVVGGSLVLYALRAPTVASRV-----HYGPLSREAL 351 Query: 362 LV------ILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLI 415 L+ + L +L FP ++ +FN + + + +LL + I + Sbjct: 352 LLFNNLVFCVATLTVLLGTLFPLVMDAAGQGKYSVGPPYFNAVFVPLMALLLPFMGIGPL 411 Query: 416 NSWKLIFIFLGIIIIGGIRGFPEIFLA-------------------LYFFIYLLLFTLIL 456 + WK + R + E+ L L+ + +LL ++ Sbjct: 412 SRWKRDTV---------ARWWQELLLPAVTVVLLAALLPLFGREYNLWIALAVLLAGWVV 462 Query: 457 I---------------IKQKFS--------FIVYHFNFFFIMLSLLLITIYGEEFILNFS 493 + I+ K + ++ H F ++L +++T E L Sbjct: 463 LSLARDLRNRTAVVRGIRAKLARLSPSYLGMVMGHCGFAAMVLGAVVVTQLSIERDLKMV 522 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 +G + ++ + F L+ + N+ + F + D + L +KR Y+ Sbjct: 523 VGDSQTVS-GYRFDFERLDRVDGPNFSADQATFSVWDGDTQIA------TLTPQKRRYIA 575 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLG----GIFLLDSII 609 + I T++ I LM D+Y+ +G+ +GW R+ + P I W WLG GI L + + Sbjct: 576 SNQIMTEAAIDAGLMRDLYVAMGEPVGNDGWAIRLQYKPMIRWIWLGALVIGIGGLVTAL 635 Query: 610 FSLFRCIKN 618 +R ++ Sbjct: 636 DKRYRAQRS 644
ref|ZP_06188615.1| cytochrome c-type biogenesis protein CcmF [Legionella longbeachae D-4968] gb|EEZ94553.1| cytochrome c-type biogenesis protein CcmF [Legionella longbeachae D-4968] (649 aa) Score: 201 bits (510), Expect: 1.22659e-48 Length: 589, Idn/Pos/Gap = 164/271/77 (27%/46%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGS-----LFLGYFLQFIIYFT-FINYFI 118 L DFS+++VV SS++ P YKL +W +EGS L LG++ + +F+ ++ + Sbjct: 62 LQDDFSVIYVVSNSSISLPWFYKLCAVWGGHEGSMLLWVLILGFWTLLVAFFSSGLDREM 121 Query: 119 NKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVL--EGNELNFLLQDIN 176 L+V + ++ FILF L+ F F VL +G +LN LLQD Sbjct: 122 RTRVLVV--LGWLSIGFILF----------LLXTSNPFLRQFQVLNTQGRDLNPLLQDPG 169 Query: 177 ILIHPPLIYISYASYSIIFSISFTIL-IIKCKFYVLYILRFLNLIGWFIASFSILLGSRW 235 L HPP++Y+ Y +S+ F+ + L K + R L W + I LGS W Sbjct: 170 FLFHPPMLYMGYVGFSVAFAFAIAALWAGKVESSWSKWTRPWTLAAWCCLTAGITLGSWW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ ALLHSL + + + ++ L +A + + +I Sbjct: 230 AYRELGWGGWWFWDPVENASFMPWLVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSLSLI 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFL-VFIFILIVILLKKYTYFTSIFDLNNHYN 354 G LVRSG+L SVH F P + L F L V L++ L + T + NN Sbjct: 290 GTFLVRSGVLTSVHAFAVDPQRGLYILGFLLFVIGGSLVLFLFRAQTLHSE----NNPSP 345 Query: 355 FVYY-------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILL 407 F +FL+VI+ L +L +P LI+ L +FN + F+ +++ Sbjct: 346 FSRESALLLNNVFLVVIM--LTVLMGTVYPLLIEGLGLGKLSVGAPYFNSV---FVPLMV 400 Query: 408 TLIIIFLI--------NSWKLIF-IFLG----------IIIIGGIRGFPEIFLALYFFIY 448 ++++ + ++W+++ FLG ++++G + ++ L + Sbjct: 401 PMLLLMGVGIHLKWNKDNWRVVLKKFLGTAALSLLIPFVLLMGTKKFDASAYMGLCLSFW 460 Query: 449 LLLFTLILIIKQK------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGK 496 ++L T K+ + ++ H ++ + + T YG E + + GK Sbjct: 461 VILSTAQAAYKRVTERGLSHVGQAYWGMVLAHLGVAATVIGIAVSTAYGVEDDVQMAPGK 520 Query: 497 TLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 + L + I F + NY T F I++ V++ EKR Y + Sbjct: 521 KVYLL-GYSIEFMHQEPLIGPNYKGTRAQFKISN-------NGKARVIYPEKRLYTVGQM 572 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 T+S I D+Y+ LG+ + W R+ + PFI W W GG +L Sbjct: 573 AMTESAIDVTPFRDIYVALGEPLSNDSWSVRLYYKPFIRWIWFGGFMIL 621
ref|YP_003455435.1| cytochrome C-type biogenesis protein CcmF [Legionella longbeachae NSW150] emb|CBJ12348.1| cytochrome C-type biogenesis protein CcmF [Legionella longbeachae NSW150] (649 aa) Score: 200 bits (509), Expect: 1.58866e-48 Length: 589, Idn/Pos/Gap = 164/271/77 (27%/46%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGS-----LFLGYFLQFIIYFT-FINYFI 118 L DFS+++VV SS++ P YKL +W +EGS L LG++ + +F+ ++ + Sbjct: 62 LQDDFSVIYVVSNSSISLPWFYKLCAVWGGHEGSMLLWVLILGFWTLLVAFFSSGLDREM 121 Query: 119 NKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVL--EGNELNFLLQDIN 176 L+V + ++ FILF L+ F F VL +G +LN LLQD Sbjct: 122 RTRVLVV--LGWLSIGFILF----------LLITSNPFLRQFQVLNTQGRDLNPLLQDPG 169 Query: 177 ILIHPPLIYISYASYSIIFSISFTIL-IIKCKFYVLYILRFLNLIGWFIASFSILLGSRW 235 L HPP++Y+ Y +S+ F+ + L K + R L W + I LGS W Sbjct: 170 FLFHPPMLYMGYVGFSVAFAFAIAALWAGKVESSWSKWTRPWTLAAWCCLTAGITLGSWW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ ALLHSL + + + ++ L +A + + +I Sbjct: 230 AYRELGWGGWWFWDPVENASFMPWLVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSLSLI 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFL-VFIFILIVILLKKYTYFTSIFDLNNHYN 354 G LVRSG+L SVH F P + L F L V L++ L + T + NN Sbjct: 290 GTFLVRSGVLTSVHAFAVDPQRGLYILGFLLFVIGGSLVLFLFRAQTLHSE----NNPSP 345 Query: 355 FVYY-------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILL 407 F +FL+VI+ L +L +P LI+ L +FN + F+ +++ Sbjct: 346 FSRESALLLNNVFLVVIM--LTVLMGTVYPLLIEGLGLGKLSVGAPYFNSV---FVPLMV 400 Query: 408 TLIIIFLI--------NSWKLIF-IFLG----------IIIIGGIRGFPEIFLALYFFIY 448 ++++ + ++W+++ FLG ++++G + ++ L + Sbjct: 401 PMLLLMGVGIHLKWNKDNWRVVLKKFLGTAALSLLIPFVLLMGTKKFDASAYMGLCLSFW 460 Query: 449 LLLFTLILIIKQK------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGK 496 ++L T K+ + ++ H ++ + + T YG E + + GK Sbjct: 461 VILSTAQAAYKRVTERGLSHVGQAYWGMVLAHLGVAATVIGIAVSTAYGVEDDVQMAPGK 520 Query: 497 TLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 + L + I F + NY T F I++ V++ EKR Y + Sbjct: 521 KVYLL-GYSIEFMHQEPLIGPNYKGTRAQFKISN-------NGKARVIYPEKRLYTVGQM 572 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 T+S I D+Y+ LG+ + W R+ + PFI W W GG +L Sbjct: 573 AMTESAIDVTPFRDIYVALGEPLSNDSWSVRLYYKPFIRWIWFGGFMIL 621
ref|ZP_02166177.1| cytochrome c-type biogenesis transmembrane protein [Hoeflea phototrophica DFL-43] gb|EDQ33780.1| cytochrome c-type biogenesis transmembrane protein [Hoeflea phototrophica DFL-43] (664 aa) Score: 200 bits (508), Expect: 2.18137e-48 Length: 595, Idn/Pos/Gap = 171/266/66 (28%/44%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+ VVE S +P LYK+ +W N+EGS+ L + L +++ + F L Sbjct: 62 VVSDFSVQNVVENSHSLKPMLYKITGVWGNHEGSMLL-WILILVLFSGLVALFGRNLPDT 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFTVLEGNELNFLLQDINILIHPP 182 +K +I ++FL LL FLR D EGN+LN +LQDI + IHPP Sbjct: 121 LKANVLGVQAWI--TVAFLLFVLLTSNPFLRLDP----APAEGNDLNPILQDIGLAIHPP 174 Query: 183 LIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTEL 240 L+Y+ Y +SI FS + LI + + + +R L W + I +GS WAY EL Sbjct: 175 LLYLGYVGFSISFSFAIAALI-EGRIDAAWARWVRPWTLAAWVFLTAGISMGSYWAYYEL 233 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL+ ALLHS L+ K +++ ++ L + + ++G LV Sbjct: 234 GWGGWWFWDPVENASFMPWLVGTALLHSALVMEKREALKIWTVLLAILTFSFSLLGTFLV 293 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFDLNNHYN 354 RSG+L SVH F P+ + L +VFI F L LK F I + Sbjct: 294 RSGVLTSVHAFATDPSRGVFILGILVVFIGGALALFGLRAASLKAGGMFAPI---SREGA 350 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN------KILLLFI---GI 405 V L L+ LY P L++ + FFN I LL G Sbjct: 351 LVLNNLFLTTAAATVLIGTLY-PLLLESVTGTKISVGPPFFNLTFGPLMIPLLMAVPFGP 409 Query: 406 LLTLIIIFLINSWKLIFIFLGIIIIGGI------RGFP---EIFLALYFFIYLLLFT--- 453 LL L + ++ +GI ++ G+ G P + +AL F+ L T Sbjct: 410 LLAWKRADLAGAAHRLYFAIGISLLVGLGVVFLQTGAPVLAGLGIALGAFLILGAITDIA 469 Query: 454 ----------------LILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 L+ + + F H ++ ++ ++I+ E ++ G T Sbjct: 470 LRSGIGRVATGVAWSRLVGLPRSAFGTAFAHMGLGVTVIGVVAVSIFSTETVVGMKPGDT 529 Query: 498 LLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 +L + + F + NY S G F I M + + S KRFY + + Sbjct: 530 VLAG-GYEVRFEGIRDYAGPNYTSQSGEFTI------MRGDEVVASTASAKRFYAARGMP 582 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 T++ I T S +YI LGD G R+ + ++++ W G + ++ + SL Sbjct: 583 TTEAGIVTFGASQLYIALGDPEANGGLVVRVWWKSWVTFIWYGTVLMMIGGVLSL 637
ref|YP_001784061.1| cytochrome C biogenesis protein CcmF [Haemophilus somnus 2336] gb|ACA32389.1| cytochrome c-type biogenesis protein CcmF [Haemophilus somnus 2336] (649 aa) Score: 199 bits (505), Expect: 4.21694e-48 Length: 589, Idn/Pos/Gap = 171/271/72 (29%/46%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINK 120 L +DFS+ +VV S+ N P Y+L +W ++EGSL L +L + F Sbjct: 62 LTNDFSVQYVVNNSNTNLPLQYRLSAVWGSHEGSLLLWIWLLTLWSAAVAFLSKQLPQEA 121 Query: 121 LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIH 180 + ++ + + F+LF + F S FD F +EG ELN LLQDI ++ H Sbjct: 122 VARVLAIMGIITIGFLLF-VMFTSNP-------FDRTFPDFPVEGRELNPLLQDIGLIFH 173 Query: 181 PPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PPL+Y+ Y +S+ F+ + L+ K R + W + I+LGS WAY E Sbjct: 174 PPLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE SL+PWL ALLHSL + K + ++ L + + + ++G L Sbjct: 234 LGWGGWWFWDPVENASLMPWLAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYY 358 VRSG+L SVH F + P + + L ++ ++I L Y Y + I NN + Sbjct: 294 VRSGILVSVHAFASDPTRGL----YILAYLIVVIGGSLALYAYKGNLIRTRNNAERYSRE 349 Query: 359 IFLLV----ILYFLYLLFV-LYFPFLIKCYNDNALLFSFGFFNKILLL------------ 401 LL+ ++ L ++F+ P + K + FF+++ LL Sbjct: 350 TMLLINNILLMTALSVVFLGTLLPLVHKQLGLGTISIGSPFFDQMFLLIMIPLSLLLGVG 409 Query: 402 ---------FIGILLTLII---IFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYL 449 F I L +II I LI + L + I + + G + +A+ F + L Sbjct: 410 PLVKWRRDQFCAIRLPVIISLVIMLITGFVLPYFLQDRITVSAVLG---VMMAM-FILLL 465 Query: 450 LLFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN- 501 L+ L K SF + H+ L + + TI+G F N+SI + + +N Sbjct: 466 ALYELQQRATHKHSFWIGITKLSRSHWGMVLAHLGVAM-TIWGIAFSQNYSIERDVRMNV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 ++ F+ ++ + NYL I+ + LF+EKRFY Sbjct: 525 GDTVKIADYEFTFQGISDVNGVNYLGGKAQIDISR------NGKFETTLFAEKRFYTVSK 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ + W R+ + PFI W WLGGIF+ Sbjct: 579 MTMTEAAIDWGLSRDLYVALGESLNDGSWALRLYYKPFIRWIWLGGIFM 627
ref|ZP_08330730.1| Cytochrome c heme lyase subunit CcmF [gamma proteobacterium IMCC1989] gb|EGG93119.1| Cytochrome c heme lyase subunit CcmF [gamma proteobacterium IMCC1989] (667 aa) Score: 198 bits (503), Expect: 7.81893e-48 Length: 589, Idn/Pos/Gap = 171/271/67 (29%/46%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+ DFS+ +V S+ P +YK+ +W +EGSL L ++ + +TF ++ I Sbjct: 62 LVDDFSVAYVANNSTTLLPDMYKVSAVWGGHEGSLLL--WVLILATWTFAVSVFSRHLPI 119 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 L +V I+ I FL TLL FD F EG++LN LLQD ++IHPP++ Sbjct: 120 DMLARVLSVMGII-GIGFLLFTLL-TSNPFDRILPFAPQEGSDLNPLLQDPGLIIHPPML 177 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y+ Y +S++F+ + L+ + R + W + I LGS WAY ELGWG Sbjct: 178 YMGYVGFSVVFAFAIAALMSGRLDSAWARWSRPWTTVAWSFLTAGIALGSWWAYYELGWG 237 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE S +PWL+ AL+HSL + K + + ++ L + + + ++G LVRSG Sbjct: 238 GWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTILLAIFAFSLSLLGTFLVRSG 297 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSI--FD-LNNHYNFVYYIF 360 +L SVH F N P + L F L+ + +++ + S+ FD L+ + Sbjct: 298 VLTSVHAFANDPERGLFILIFLLLVVGGSLLLYAVRAPAVKSMASFDWLSRELFLLGNNI 357 Query: 361 LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWK- 419 +LV++ LL LY P L +FN + +G+L LI I + WK Sbjct: 358 VLVVITLTVLLGTLY-PLFSDALGWGKLSVGPPYFNAFFVPLMGVLCLLIGIGPLTLWKK 416 Query: 420 ---------LIFIFLGIIIIGGIRGFPEIFLALY-FFIYLLLFT-------LILIIKQK- 461 L + ++G + FP + Y FF L +FT L++ I QK Sbjct: 417 TNREKLLNFLKRPLIASTVLGAV--FPLFYGEEYSFFAALTVFTATWVVAALVVDIHQKV 474 Query: 462 -----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN--D 502 + ++ H +L L TIY ++ L G+ L L + Sbjct: 475 RNAKSLQSGFSRLTRSYYGMVLAHVGVAVTVLGTCLNTIYSDQRDLRMEEGERLSLGRYE 534 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQ--NVLFSEKRFYLYQSLINTK 560 ++ R +N NY + G + YE+ + + L EKR YL I T+ Sbjct: 535 YHLVAIRPVN---GPNYRAQQGQIDV--------YEDGKLISSLLPEKRQYLSGGNIMTE 583 Query: 561 SIIYTNLMSDVYILLGD--GNFENG---WYSRILFMPFISWFWLGGIFL 604 + I + + D+Y+ LG+ G G W R+ PF+SW WLG + + Sbjct: 584 AGIDSGMFGDIYVALGESLGTNTEGKASWAVRLHDKPFVSWIWLGALLM 632
ref|YP_718608.1| cytochrome c-type biogenesis protein F [Haemophilus somnus 129PT] gb|ABI24676.1| cytochrome c-type biogenesis protein F [Haemophilus somnus 129PT] (649 aa) Score: 198 bits (503), Expect: 8.42869e-48 Length: 589, Idn/Pos/Gap = 171/270/72 (29%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINK 120 L +DFS+ +VV S+ N P Y+L +W ++EGSL L +L + F Sbjct: 62 LTNDFSVQYVVNNSNTNLPLQYRLSAVWGSHEGSLLLWIWLLTLWSAAVAFLSKQLPQEA 121 Query: 121 LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIH 180 + ++ + + F+LF + F S FD F +EG ELN LLQDI ++ H Sbjct: 122 VARVLAIMGIITIGFLLF-VMFTSNP-------FDRTFPDFPVEGRELNPLLQDIGLIFH 173 Query: 181 PPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PPL+Y+ Y +S+ F+ + L+ K R + W + I+LGS WAY E Sbjct: 174 PPLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE SL+PWL ALLHSL + K + ++ L + + + ++G L Sbjct: 234 LGWGGWWFWDPVENASLMPWLAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYY 358 VRSG+L SVH F + P + + L ++ ++I L Y Y + I NN + Sbjct: 294 VRSGILVSVHAFASDPTRGL----YILAYLIVVIGGSLALYAYKGNLIRTRNNAERYSRE 349 Query: 359 IFLLV----ILYFLYLLFV-LYFPFLIKCYNDNALLFSFGFFNKILLL------------ 401 LL+ ++ L ++F+ P + K + FF+++ LL Sbjct: 350 TMLLINNILLMTALSVVFLGTLLPLVHKQLGLGTISIGSPFFDQMFLLIMIPLSLLLGVG 409 Query: 402 ---------FIGILLTLI---IIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYL 449 F I L +I II LI + L + I + + G + +A+ F + L Sbjct: 410 PLVKWRRDQFCAIRLPVIISSIIMLITGFVLPYFLQDRIAVSAVLG---VMMAM-FILLL 465 Query: 450 LLFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN- 501 L+ L K SF + H+ L + + TI+G F N+SI + + +N Sbjct: 466 ALYELQQRATHKHSFWIGITKLSRSHWGMVLAHLGVAM-TIWGIAFSQNYSIERDVRMNV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 ++ F+ ++ NYL I+ + LF+EKRFY Sbjct: 525 GDTVKIADYEFTFQGISDANGVNYLGGKAQIDISR------NGKFETTLFAEKRFYTVSK 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ + W R+ + PFI W WLGGIF+ Sbjct: 579 MTMTEAAIDWGLSRDLYVALGESLNDGSWALRLYYKPFIRWIWLGGIFM 627
ref|ZP_21147744.1| cytochrome c-type biogenesis protein CcmF [Ochrobactrum intermedium M86] gb|ELT47308.1| cytochrome c-type biogenesis protein CcmF [Ochrobactrum intermedium M86] (663 aa) Score: 197 bits (501), Expect: 1.30074e-47 Length: 657, Idn/Pos/Gap = 170/291/76 (25%/44%/11%) Query: 7 HFLLIFIFIYSCNFFFLDSFYKYKKVTTLLEIVHHYYFYFNYIYNIIIIIIWLIGIILLL 66 HF L+ S + +++ T L+ + ++ +I + ++ ++ Sbjct: 7 HFALVLALALSIVQSIMPVVGAHRRDTQLMSVAAPTAIA---VFALICLASAVLVHAYVV 63 Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 SDFS+L VVE S +P LYK+ +W N+EGS+ L F+ TF + + + + Sbjct: 64 SDFSVLNVVENSHSQKPLLYKITGVWGNHEGSMLLWVFI-----LTFFSALVAAFSGNLP 118 Query: 127 LTFFYNVYFIL--FNISFLSLTLLLIFLRFDFFFNFTV-LEGNELNFLLQDINILIHPPL 183 T NV + ++FL+ ++F F F +EG +LN +LQDI + IHPPL Sbjct: 119 ETLRANVLAVQGWIGVAFLAF---IVFTSNPFTRIFPAPMEGGDLNPILQDIGLAIHPPL 175 Query: 184 IYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ FS + L+ + + + +R L+ W + I +GS WAY ELG Sbjct: 176 LYLGYVGFSVCFSFAVAALL-EGRLDAAWARWVRPWALVAWMFLTGGIAMGSYWAYYELG 234 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE S +PWL+ ALLHS L+ K +++ ++ L + + + ++G LVR Sbjct: 235 WGGWWFWDPVENASFMPWLVGTALLHSALVMEKRSALKIWTVLLAILTFSLSLLGTFLVR 294 Query: 302 SGLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 SG+L SVH+F P F++ L F+ L + ++ T ++ V+ Sbjct: 295 SGVLTSVHSFATDPGRGLFILAILAIFIGGSLSLFALRVQSLTAGGIFHPISREGALVFN 354 Query: 359 IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN------KILLLFI--------- 403 L L+ LY P L++ + + FFN I LLF Sbjct: 355 NLFLTTAAATVLIGTLY-PLLLEVMTGDKISVGAPFFNMTFGPLMIPLLFAVPFGPLLAW 413 Query: 404 ------GILLTLIIIFLIN-----------SWKLIFIFLGI-----IIIGGI------RG 435 G+ L+ +F ++ S K + GI +I G + G Sbjct: 414 KRGDLYGVSQRLMTVFALSLVAAAIVLWSTSAKSVLAACGIGLAAWLIFGSLTDLVLKAG 473 Query: 436 FPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIG 495 ++ + F + L + F + H +L ++ +T +G E +L G Sbjct: 474 IGKVSASKAFARFKGL------PRSVFGTALAHIGLGVTLLGIVSVTTFGTENVLIMRPG 527 Query: 496 KTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 T + D + + F L + +N+ G F + D + I+ KRF+ + Sbjct: 528 DTARVQD-YTLRFEGLRPLTGSNFTENRGTFTLLDSSS-RSLGQIE----PSKRFFPARQ 581 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 + T+S I T S VY+ LGD + RI + P ++ W G + ++ +FSL Sbjct: 582 MPTTESGIKTLWFSQVYVALGDEPGDGSVVVRIWWKPDVTLIWYGALVMMVGALFSL 638
ref|YP_267784.1| cytochrome c-type biogenesis protein CcmF [Colwellia psychrerythraea 34H] gb|AAZ26741.1| cytochrome c-type biogenesis protein CcmF [Colwellia psychrerythraea 34H] (679 aa) Score: 197 bits (500), Expect: 1.64305e-47 Length: 592, Idn/Pos/Gap = 159/269/64 (26%/45%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++ DFSI ++ S+ + P +K+ +W +EGSL L ++ T + + + Sbjct: 69 VVDDFSIKYIAGHSNTHLPYYFKISAVWGGHEGSLLL-----WVFSLTAWTAAVARFSKG 123 Query: 125 VKLTFFYNVYFIL--FNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPP 182 ++ F V ++ I F++ TLL FD + +EG +LN LLQDI ++IHPP Sbjct: 124 IEEEFISRVLAVMGMIAIGFIAFTLL-TSNPFDRLWPNVPMEGRDLNPLLQDIGLIIHPP 182 Query: 183 LIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELG 241 L+Y+ Y +++ F+ + L+ K R + W + I LGS WAY ELG Sbjct: 183 LLYLGYVGFAVAFAFAVAALMAGKMDAAWARWSRPWTVGAWVCLTLGIALGSWWAYYELG 242 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE S +PWL+ AL+HSL + K R ++ L + + + ++G LVR Sbjct: 243 WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGTFRNWTILLAIFAFGLSLLGTFLVR 302 Query: 302 SGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYI-- 359 SG++ SVH+F P+ I F LV + I I L Y + S + + F +Y Sbjct: 303 SGVITSVHSFAADPSRGI----FILVILAIAIGGSLTLYAFRAST--VASFSRFAFYSRE 356 Query: 360 -------FLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIII 412 +LV+ LL LY P L+ + +FN + + + IL ++ I Sbjct: 357 TALLLCNVILVVAAVTVLLGTLY-PLLVDALGYGKISVGPPYFNAVFVPIMSILFIIMGI 415 Query: 413 FLINSWK------------------LIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTL 454 + WK + F L +I GG E + I L + Sbjct: 416 GPLIRWKKAKQGELRKRLLSSSVFSIAFGLLFPVIYGG-----EFNALVAMGITLATWVF 470 Query: 455 ILIIKQ--------------KFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL 500 ++++K+ H ++ + ++++Y E + ++ + + + Sbjct: 471 LVVVKEVKNQFQTVGKLTTSHIGMATAHAGIAITIVGVTIVSMYESETNVKMALNERVTI 530 Query: 501 NDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTK 560 + + I F+ + H+ NY + G I P E + ++L E+R Y Q++ T+ Sbjct: 531 S-GYQIEFKGIKHVEGPNYSAEQGQINIYKVTGPNESEFV-SLLKPERRTYRVQTMGMTE 588 Query: 561 SIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 + I L DVY+ LGD W R+ + PF+ W WLG IF+ I S+ Sbjct: 589 AGIDPGLFRDVYVALGDPLPGGAWAIRVHYKPFVRWIWLGAIFMGAGGILSM 640
ref|ZP_01132715.1| cytochrome c-type biogenesis protein ccmF [Pseudoalteromonas tunicata D2] gb|EAR29503.1| cytochrome c-type biogenesis protein ccmF [Pseudoalteromonas tunicata D2] (661 aa) Score: 196 bits (499), Expect: 2.29402e-47 Length: 587, Idn/Pos/Gap = 169/274/68 (28%/46%/11%) Query: 63 ILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLT 122 + L DF++ +V SS + P YK+ W N+EG++ + +Q I + + L Sbjct: 60 VSLHDDFTVAYVANNSSSSLPWYYKVTATWGNHEGAMLVWVLMQSI-WTALVAVLSKSLP 118 Query: 123 LIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPP 182 +++ + F+ + F+S TLLL F+ + +EG +LN LLQD ++IHPP Sbjct: 119 WLLRARVLGVLGFL--GVGFMSYTLLLSS-PFELLLPYYPVEGRDLNPLLQDPGMIIHPP 175 Query: 183 LIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELG 241 L+Y+ Y S+ F+ + L+ K R + W + I +GS WAY+ELG Sbjct: 176 LLYMGYVGLSVSFAFAIAALMTGKLDNTWAKWSRPWTMAAWGFLTLGITIGSWWAYSELG 235 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE SL+PWL++ ALLHSL K + + ++ L +A + + ++G +VR Sbjct: 236 WGGWWFWDPVENASLMPWLVATALLHSLSATEKRGVFKSWTVLLAIAAFSLSLLGTFIVR 295 Query: 302 SGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLK---KYTYFTSIFD--LN 350 SG++ SVH F P + L F L + ++L V +K +Y +F+ LN Sbjct: 296 SGIIVSVHAFATDPARGVFILGFLLTVVGGSLLLYVLKVSDVKSEGRYQFFSREVALWLN 355 Query: 351 NHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILLLFIGILL 407 N LLV+ + LL L P + K ++ FFN+ ILL+ +LL Sbjct: 356 N--------ILLVVATLIVLLGTL-LPLVHKELGLGSISIGTPFFNQMFSILLVPFVVLL 406 Query: 408 TLIIIFLINSWKLIFIFLG-------IIIIGGIRGFPE-------IFLALYFFIYLLLFT 453 L + +L F+F +IIG F F+A+ ++++L + Sbjct: 407 ALGPMLRWKQNQLKFVFNKYAFALVLSVIIGAAWLFSSYETVAVMTFVAVVSALWIVLTS 466 Query: 454 LILI-IKQK----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGK 496 LI I +K K ++ I H F F++ + L + Y E + G+ Sbjct: 467 LIDIALKFKGTVNFAEGWKKLTLSYWAMIAGHVGFAFVISGVALTSAYSVERSVKMEPGE 526 Query: 497 TLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 ++ LN + F + + NY G + + + +L +EKR Y + Sbjct: 527 SVYLNQ-YEYRFNGVYALNGPNYTGHAGEVTV------LKDQKFVEILHAEKRLYTVGNQ 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGI 602 T++ I D+Y+ LG+ F NG W RI PF+ W WLGGI Sbjct: 580 FMTEAAIDAGFTRDLYLALGE-QFSNGAWSLRIYHKPFVRWIWLGGI 625
ref|ZP_10299129.1| cytochrome C biogenesis protein ccmF [Pseudoalteromonas spongiae UST010723-006] (653 aa) Score: 196 bits (499), Expect: 2.37188e-47 Length: 590, Idn/Pos/Gap = 160/268/73 (27%/45%/12%) Query: 63 ILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINK-- 120 + L+ DF++ +V SS P YK+ + W +EG++ L +Q +T I F +K Sbjct: 60 VTLIDDFTVAYVASHSSTTLPWYYKVTSTWGGHEGAVLLWVLMQ--TGWTAIVAFASKSL 117 Query: 121 ----LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDIN 176 ++ + F + FIL+ LL+ F+ + +EG++LN LLQD Sbjct: 118 PWQLRARVLSILGFLGLGFILYT--------LLMSSPFERLLPYFPIEGHDLNPLLQDPG 169 Query: 177 ILIHPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRW 235 ++IHPPL+Y+ Y S+ F+ + L++ K R + W + I +GS W Sbjct: 170 MIIHPPLLYMGYVGLSVSFAFAIAALLMGKLDNTWAKWSRPWTMAAWLFLTLGITIGSWW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE SL+PWL++ AL+HSL + K + + ++ L +A + + ++ Sbjct: 230 AYAELGWGGWWFWDPVENASLMPWLVATALIHSLAVTEKRGVFKSWTVLLAIAAFSLTLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNF 355 G +VRSG++ SVH F P F L F+ I++ L Y + + Y F Sbjct: 290 GTFIVRSGIIVSVHAFTTDPG----RGSFILSFLAIVVGGSLLLYALRAGTVESTSRYKF 345 Query: 356 ------VYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---LLLFIGIL 406 ++ LL+ + L +L P + K + FFN++ LL+ +L Sbjct: 346 FSREVALWLNNLLLCVSMLIVLLGTLLPMVHKELGMGTISIGVPFFNQMFFYLLMPFSLL 405 Query: 407 LTLIIIFLINSWK------LIFIFLGIIIIGGIRGFP---------------EIFLALYF 445 L L + WK ++ +G +++ + F +F AL+ Sbjct: 406 LGLGPML---RWKQNKFSHVMKKLVGALVVTAVVTFAWLYSSYENVSTTTLVGVFFALWV 462 Query: 446 FIYLLLFTLILIIKQKFSFI----------VYHFNFFFIMLSLLLITIYGEEFILNFSIG 495 + + + + K+ S H F F++L + L + Y E + + G Sbjct: 463 CLTVAIDLFEKLSKEGMSLTKLGNSFWAMHTAHLGFAFVVLGVTLTSAYSVEKQVKVNPG 522 Query: 496 KTLLLND-NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQ 554 + + LND N+ F + I NY G ++T F + L++EKR Y Sbjct: 523 EQVQLNDYNY--RFDGVKAIVGPNYKGHAG--VVTVFKD----NQKVTELYAEKRQYDVG 574 Query: 555 SLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ W RI PF+ W WLGGI + Sbjct: 575 MQVMTEAAIDAKLSRDLYLALGEQLSNGAWALRIYEKPFVRWMWLGGILM 624
ref|ZP_02062045.1| cytochrome c-type biogenesis protein CcmF [Rickettsiella grylli] gb|EDP46050.1| cytochrome c-type biogenesis protein CcmF [Rickettsiella grylli] (638 aa) Score: 196 bits (499), Expect: 2.47292e-47 Length: 587, Idn/Pos/Gap = 170/274/73 (28%/46%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L++DFS ++VV+ S+ + P Y+L +W+ +EGS+ L F+ + +T N+ + Sbjct: 62 LVNDFSFIYVVQNSNTHLPWFYRLSAVWAGHEGSILLWVFI--LNLWTVSVLVFNESMEL 119 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFT---VLEGNELNFLLQDINILIHP 181 +LT +V + F+S LL L FN T + +G +LN LLQD ++IHP Sbjct: 120 ERLTSVLSV------LGFISAGFLLFLLTLSNPFNLTSELIQDGRDLNPLLQDPGLIIHP 173 Query: 182 PLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTE 239 PL+Y+ Y +S+ FS + L+ +F + +R L W ++ I+ GS WAY Sbjct: 174 PLLYMGYVGFSVSFSFAIAALL-SGRFEKKWAAAMRPWTLAAWCFLTWGIVSGSWWAYRV 232 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE +SLLPWL AL+HSL + + +++ + L + + +IG + Sbjct: 233 LGWGGWWFWDPVENVSLLPWLSGTALIHSLFVVERQELLKTWVILLAIITFAFSLIGTFI 292 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFIL-------IVILLKKYTYF-----TSIF 347 VRSG+L SVH F P + L F+VFI I + T F T++ Sbjct: 293 VRSGVLISVHAFAVDPWRGVFMLGLFVVFIGSALSLYAFRIQCFQQSMTAFHWFSRTTLL 352 Query: 348 DLNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILL 407 LNN LL ++ F LL LY P +I+ L +FN +L F LL Sbjct: 353 ILNN--------VLLSVMVFTILLGTLY-PLIIEVLGLGKLSVGAPYFNLVLAPFAVFLL 403 Query: 408 TLIIIFLINSW---------KLIFIFLGIIIIGGI------RGFP-EIFLALYFFIYLLL 451 + + + SW K+ LG + I I R FP ++F+ L I+++L Sbjct: 404 FFMGLSSLTSWKHQTHYHLKKIPNRLLGSVSISIILMSLLSRKFPWQVFIGLTLAIWIVL 463 Query: 452 FTLIL-------------IIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTL 498 T+ L I+K + + ++ H + + +LL + Y E + SIG +L Sbjct: 464 NTIPLLVESFKKKLSVRTILKTQGAMMIAHSGVVIVAIGILLSSYYSRERNVGMSIGDSL 523 Query: 499 LLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 LL + + + NY + + PM + R+Y +++ Sbjct: 524 LL-AGYHFKLHHVESLQGPNYTGAVAHIQMNHQKKPMLQPQL--------RYYPITNVMI 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 +K I D Y+ L + + W R + PF+ W W+GGI +L Sbjct: 575 SKPAIAAGFWRDWYVSLAEPKGKQTWVLRFYYKPFVRWIWMGGIVML 621
ref|ZP_10446151.1| cytochrome c-type biogenesis protein CcmF [Bartonella sp. DB5-6] gb|EJF77645.1| cytochrome c-type biogenesis protein CcmF [Bartonella sp. DB5-6] (660 aa) Score: 196 bits (499), Expect: 2.59987e-47 Length: 607, Idn/Pos/Gap = 178/281/89 (29%/46%/14%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL--- 121 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L + L + T + F L Sbjct: 62 IVSDFSVLNVVENSHSEKPMLYKITGVWGNHEGSMLL-WVLSLAFFSTLLASFSQHLPEQ 120 Query: 122 --TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 LI+ + F+LF I F+S FLR N L+G +LN LLQDI + I Sbjct: 121 FTALILICQSWITSAFLLF-ILFMSNP----FLRV----NPPALQGKDLNPLLQDIALAI 171 Query: 180 HPPLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAY 237 HPPL+Y+ Y +S+ FS + L++ + ++ +L L+ W + I++GS WAY Sbjct: 172 HPPLLYLGYVGFSLCFSFAVAALVMGYVDGLWARWVRPWL-LLAWCFLTLGIMVGSYWAY 230 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+W WD VE +S +PWL A LHS L+ K ++ +LFL + + + ++G Sbjct: 231 YELGWGGYWLWDPVENVSFMPWLSGTAFLHSALVLEKRETLKSWTLFLALLTFSLSLMGT 290 Query: 298 ILVRSGLLQSVHTFVNSP---NFLIIFLYFF---LVFIFILIVILLKKYTYFTSIFDLNN 351 LVRSGLL SVH+F P ++ L+FF + +F L V +L YF I + Sbjct: 291 FLVRSGLLISVHSFAVDPARGRAILALLFFFTGGALLLFALRVPVLTTGKYFQPI----S 346 Query: 352 HYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN--------------- 396 F+ LL+ +L +P+ I+ + FFN Sbjct: 347 REGFIVLNNLLLTTIIATVLIGTLYPYFIEALTGQRISVGAAFFNLTCGPLMVLLLLLAP 406 Query: 397 -----------------KILLLFIGILLTLIIIFLINSWKLIFIFLGIIIIGGIRGFPEI 439 ++ ++F + IIF + SW+ IF LGI G+ F + Sbjct: 407 FGSMMAWKRGDFLAVFERLWVVFALVCAVCFIIFYVTSWRDIFAALGI----GLSAF--V 460 Query: 440 FLALYFFIYLLL--FTLILIIKQK---------FSFIVYHFNFFFIMLSLLLITIYGEEF 488 FL ++ L L+I+ K F V H I+ ++ + +G+E Sbjct: 461 FLGSLADLWGKSGHRKLALLIRVKRLIGLPWSVFGAAVAHMGLGVILFGIICVASFGQER 520 Query: 489 ILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLF--S 546 IL IG + + + ++ + NY + NF I YEN +V + + Sbjct: 521 ILTMHIGDKVAIAGK-TLYLNEIRNSAGPNYSAIEFNFTI--------YENKNSVRYVTA 571 Query: 547 EKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLD 606 KRFY Q+ T+ I ++ +S +YI+ G + + G I + P++ WLG + + Sbjct: 572 SKRFYSSQNTSTTEVGIQSHGLSQLYIVPGRID-DRGLVLHIWWKPYVMCVWLGALMMAM 630 Query: 607 SIIFSLF 613 SLF Sbjct: 631 GGCLSLF 637
emb|CBI77476.1| cytochrome C-type biogenesis protein [Bartonella rochalimae ATCC BAA-1498] (650 aa) Score: 196 bits (498), Expect: 2.89774e-47 Length: 603, Idn/Pos/Gap = 187/293/83 (31%/48%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+L VVE S +P LYK++ +W N+EGS+ L + L + T I F +L Sbjct: 58 IVSDFSVLNVVENSHSEKPMLYKIVGVWGNHEGSMLL-WVLLLAFFSTLIALFSPQLQEQ 116 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFF-FNFTVLEGNELNFLLQDINILIHPPL 183 K +I+ +FL L ++F+ F + VL+GN+LN +LQDI++ IHPPL Sbjct: 117 FKALVLSCQSWII--SAFL---LFILFMSNPFVRVHSPVLQGNDLNPVLQDISLAIHPPL 171 Query: 184 IYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ FS + LII K + +I ++ L+ W + I +GS WAY ELG Sbjct: 172 LYLGYVGFSVCFSFAIAALIIGYINKIWACWIRPWV-LLAWIFLTIGITVGSYWAYYELG 230 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWDSVE +SL+PWL ALLHS+++ K ++R +LFL + + + ++G LVR Sbjct: 231 WGGYWFWDSVENVSLMPWLSGTALLHSVIVFEKRNLLRSWTLFLAILTFSLSLMGTFLVR 290 Query: 302 SGLLQSVHTFVNSP---NFLIIFLYFFLVFIFILIVI---LLKKYTYFTSIFDLNNHYNF 355 SGLL SVH+F P ++ L+FF F+L VI +LK F I + F Sbjct: 291 SGLLMSVHSFAVDPARGKAILAILFFFTGGAFLLFVIRMPILKTGGLFHPI----SREGF 346 Query: 356 VYYIFLLVILYFLYLLFVLYFPFLIKCYNDN-----ALLF--SFGFFNKILLLFI--GIL 406 + LL+ +L +P+ + AL F +FG +LLLF+ G + Sbjct: 347 IILNNLLLTTATATVLIGTLYPYFFEALTGQKISVGALFFNLTFGSLMIVLLLFVPFGTM 406 Query: 407 L-----------------------TLIIIFLINSWKLIFIFLGI-----IIIGGI----- 433 + I F ++S + IF LGI + +GG+ Sbjct: 407 MAWKRSDFFAVFERLWCVFALACVACFITFYVDSLRDIFAALGIGLAVFVFLGGLADLWN 466 Query: 434 -RGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNF 492 G+ ++ + +L L + F + H + ++ + +G+E IL Sbjct: 467 KSGYHKVSFRVRVKRFLGLPLSV------FGAALAHMGLGVTLFGIIWVATFGQERILIM 520 Query: 493 SIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYEN---IQNVLFSEKR 549 +G+T+ + D I F ++++I +NY + +F I YEN I NV S KR Sbjct: 521 QVGETVTIADK-TIRFDEVHNIAGSNYSAIQFDFKI--------YENKNVISNVTAS-KR 570 Query: 550 FYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSII 609 FY Q+ T+ I + S YI G N + G I + P++ W G + Sbjct: 571 FYSSQNRSTTEVGIQNHGFSQFYIAPGRIN-DQGLVVHIWWKPYVICIWFGAFMMAIGGG 629 Query: 610 FSL 612 FSL Sbjct: 630 FSL 632
ref|YP_003146171.1| cytochrome c-type biogenesis protein CcmF [Kangiella koreensis DSM 16069] gb|ACV26403.1| cytochrome c-type biogenesis protein CcmF [Kangiella koreensis DSM 16069] (662 aa) Score: 196 bits (497), Expect: 3.69101e-47 Length: 587, Idn/Pos/Gap = 156/269/58 (26%/45%/9%) Query: 62 IILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL 121 I + +DFS+ +V S+ P Y++ +W ++EGSL L +++ T + ++K Sbjct: 59 IAFIQNDFSVAYVANHSNTQLPIYYRISAVWGSHEGSLLL-----WVLILTGWIFAVSKF 113 Query: 122 TLIVKLTFFYNVYFI--LFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 + + V + L + F+S TL F+ F ++G +LN LLQD +++ Sbjct: 114 SKSLPDEMTARVLGVMGLIAVGFVSFTLF-TSNPFERALPFIPIDGADLNPLLQDFGLIV 172 Query: 180 HPPLIYISYASYSIIFSISFTILI-IKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 HPP++Y+ Y +S++F+ + L+ + + R ++ W + I LGS WAY Sbjct: 173 HPPMLYMGYVGFSVVFAFAIAGLLHGELDHHWAKWSRPWTVVAWIFMTIGIALGSWWAYY 232 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE S LPWL AL+HSL K + + ++ L + + + ++G Sbjct: 233 ELGWGGWWFWDPVENASFLPWLAGTALIHSLAATEKRGVFKSWTVLLAILTFSLSLLGTF 292 Query: 299 LVRSGLLQSVHTFVNSP---NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNF 355 LVRSG+L SVH F N P F+++FL + +L I K ++ ++ Sbjct: 293 LVRSGVLTSVHAFANDPVRGKFILVFLAIVVGASLLLYAIQSSKIRSKSNFTLVSREVAL 352 Query: 356 VYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLI 415 ++ LL + F+ LL L+ P +I+ + D +FN + +F +L L+ Sbjct: 353 LFNNALLAVSTFVVLLGTLH-PLMIEAFTDGKSSVGPPYFNLMFSVFFIPILLLMPFGQQ 411 Query: 416 NSWKL----------IFIFLGIIIIG-----GIRGF------PEIFLALYFFIYLLLFTL 454 WK I+ F II+ G+ GF P + ++++ T+ Sbjct: 412 IKWKKDDLPALLKKYIWWFSSCIILAFILTFGLNGFTFDELEPMAVIGTILGLWVIAGTV 471 Query: 455 ILIIKQK-----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 I Q + I H L ++L + Y E + I +T Sbjct: 472 KYIQLQSEKGQTRWAGMRKISRSYWGMIFAHIGVAVTTLGVVLTSYYSIEKDIRIEITET 531 Query: 498 LLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + + + + F+D +I NY+S+ F ++ + + L EKR Y ++ Sbjct: 532 VEV-EGLSVQFKDFKNIQGPNYISSKAIFEVSKSGDFIAE------LKPEKRRYNASQMV 584 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I L DVYI +G+ W R+ + PF+ W WLG IF+ Sbjct: 585 MTEAAIDPGLFRDVYIAMGEPLDNGAWAIRVYYKPFVRWIWLGAIFM 631
ref|ZP_08771669.1| cytochrome c-type biogenesis protein CcmF [Thiocapsa marina 5811] gb|EGV17376.1| cytochrome c-type biogenesis protein CcmF [Thiocapsa marina 5811] (661 aa) Score: 196 bits (497), Expect: 4.07971e-47 Length: 593, Idn/Pos/Gap = 164/262/77 (27%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTL- 123 L DFS+ +V S+ P++YK+ +W +EGSL L + L + + F L L Sbjct: 62 LTDDFSVEYVASHSNSLMPAIYKVSAVWGGHEGSLLL-WALMLAGWGAAVAAFSKNLPLA 120 Query: 124 ----IVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 +V + + F+LF +LL FD F LEG +LN LLQD + I Sbjct: 121 MVARVVSVLGMVAIGFLLF--------MLLTSNPFDRLFP-APLEGRDLNPLLQDPGLAI 171 Query: 180 HPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAY 237 HPP++Y+ Y +S+ F+ +I K + R W + I LGS WAY Sbjct: 172 HPPMLYMGYVGFSVAFAF-AIAALIGGKLDSAWARWSRPWTTAAWVFLTIGIALGSWWAY 230 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE S +PWL+ AL+HSL + K + ++ L ++ + + ++G Sbjct: 231 YELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRAAFKSWTVLLAISAFSLSLLGT 290 Query: 298 ILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSI------FDLNN 351 LVRSG+L SVH F P F L+F+ ++I L Y + FD+ + Sbjct: 291 FLVRSGVLTSVHAFATDPARGT----FILIFLCVVIGGSLALYAWRAPTIAGGGRFDVLS 346 Query: 352 HYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 +F+ LL + +LF P + + + F +FNK+ + L+ + Sbjct: 347 RESFLLVNNLLFATLTVLVLFGTLAPLIYEAAGWGKISVGFPWFNKMFVSLSPFLIVAMG 406 Query: 412 IFLINSWK-----------LIFIFLGII--IIGGIRGFPEIFLALYFFIYLL-------L 451 I + WK I + LGI I+ F + LA+ F + + L Sbjct: 407 IGPLTRWKHDEPMRLVRSLWIALALGIAVFIVALQPVFEDGGLAMAFGLSMSAWLVATHL 466 Query: 452 FTLILIIKQKFSFIV-----------------YHFNFFFIMLSLLLITIYGEEFILNFSI 494 L +K K F H ++ + +++I+G E + S Sbjct: 467 VALAERLKNKGGFRALAADINARNLSYYGMWTAHVGIAVFIVGVTMVSIHGSETDVRMSP 526 Query: 495 GKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQN--VLFSEKRFYL 552 G + + + F I NYL+ G F++ Y+ + VL+ EKR Y Sbjct: 527 GD-VHEDSGYRFQFNGAQAITGPNYLAQQGEFIV--------YKGERQIAVLYPEKRSYF 577 Query: 553 YQSLINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 + T++ I + D+Y+ LG+ +G W R+ + PF+ W WLG IF+ Sbjct: 578 SGGMPMTEAAINAGFLRDLYVSLGEPVGTDGDWALRVYYKPFVRWIWLGAIFM 630
ref|ZP_09993115.1| Cytochrome C-type biogenesis protein CcmF [gamma proteobacterium HIMB30] (658 aa) Score: 196 bits (497), Expect: 4.28914e-47 Length: 584, Idn/Pos/Gap = 154/256/70 (26%/43%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL--- 121 L DFS+ +V + S+++ P +++ +W +EGSL L + L + + F + Sbjct: 62 LTHDFSVKYVADNSNLDLPWHFRMSAVWGAHEGSLLL-WALILAFWGVAVALFSRGIPDH 120 Query: 122 --TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 L++ + +V F+ F +L F F G +LN LLQD ++ Sbjct: 121 MSALVLSVMGMISVGFLAF--------MLFTSNPFVRILPFAPGNGADLNPLLQDPGLIF 172 Query: 180 HPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAY 237 HPP++Y+ Y S+ F+ + LI + + R + W + I LGS WAY Sbjct: 173 HPPMLYMGYVGLSVAFAFAMASLI-SGQLDATWARWSRPWTTVAWAFLTLGIALGSWWAY 231 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE SL+PWL++ AL+HSL + K + R +L L +A + + ++G Sbjct: 232 YELGWGGWWFWDPVENASLIPWLVATALMHSLAVTEKRGLFRSWTLLLAIAAFSLSLLGT 291 Query: 298 ILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFI---FILIVILLKKYTYFTSIFDLNNHYN 354 LVRSG+L SVH F N P + L F +V I L + K + ++ Sbjct: 292 FLVRSGVLTSVHAFANDPERGVFILGFLVVVIGGSLTLYALRAGKVSEPGEFAWISRESF 351 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 ++ +L ++ LL LY P L+ + FFN + + IL++ + Sbjct: 352 LLFNNLVLTVMAVSVLLGTLY-PLLVDAVGGGKVSVGPPFFNAVFVPLTAILVSGMAFGP 410 Query: 415 INSWK----------LIFIFLGIIIIGGIRGFPE-------------IFLALYFFIYL-- 449 + W+ LI + +++G G+P + LAL+ I Sbjct: 411 LAKWRKSDDPKLYRPLIVTLIVSVLVG--LGWPSLLAGSYSIGTAIGVTLALWLAIATVV 468 Query: 450 -----------LLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTL 498 L TL + K HF ++L ++++ + E L +G Sbjct: 469 DFQKKVGLYGGLATTLARVEKGMIGMWFAHFGLAVMILGVVMVENHTEHRDLRMGVGDAQ 528 Query: 499 LLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQ--NVLFSEKRFYLYQSL 556 L N+ + DL I NY++ F I YE+ Q + +KR Y + Sbjct: 529 RLG-NYDVRMTDLAVINGPNYVADQATFEI--------YEDDQLFKTVTPQKRRYNASGM 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLG 600 + T++ I + L D+YI +G+ + W R+ PF+ W W G Sbjct: 580 VMTEASIDSGLTRDLYIAMGEPLGDGDWAVRLSVKPFVDWIWAG 623
ref|YP_006915020.1| cytochrome c-type biogenesis protein CcmF [Simiduia agarivorans SA1 = DSM 21679] gb|AFU97290.1| cytochrome c-type biogenesis protein CcmF [Simiduia agarivorans SA1 = DSM 21679] (663 aa) Score: 195 bits (496), Expect: 4.82061e-47 Length: 591, Idn/Pos/Gap = 151/266/61 (25%/45%/10%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 DFS+ +V S+ P YKL +W +EGSL L + + F + + ++ Sbjct: 64 DDFSVAYVANNSNSLLPWYYKLSAVWGGHEGSLLLWVLILTLWTFAVA---VKSHHMPIE 120 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLIYI 186 + + + F+S TLL FD EG++LN LLQD ++IHPP++Y+ Sbjct: 121 MRARVLAVMGMVAVGFISFTLLTTSNPFDRLLPSVPSEGSDLNPLLQDFGLIIHPPMLYM 180 Query: 187 SYASYSIIFSISFTILIIKC--KFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWGG 244 Y +S+ F+ + LI + + + NL W + I LGS WAY ELGWGG Sbjct: 181 GYVGFSVSFAFAIATLISGKLDSAWARWSRPWTNLA-WAFLTIGIALGSWWAYYELGWGG 239 Query: 245 FWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSGL 304 +WFWD VE S +PWL AL+HSL + K + + +L L + + + ++G LVRSG+ Sbjct: 240 WWFWDPVENASFMPWLAGTALMHSLAVTEKRGVFKSWTLLLAIFTFSLSLLGTFLVRSGV 299 Query: 305 LQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFDLNNHYNFVYY 358 L SVH F P + L F LV I + L +K T F I + F+ Sbjct: 300 LTSVHAFATDPERGLFILAFLLVVIGGSLTLYALRAPAVKSATSFVGI----SREWFLLA 355 Query: 359 IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSW 418 +L+++ +L +P + + +FNK + +G+L L+ + + ++ Sbjct: 356 NNILLVVVLATVLLGTLYPLIADALGWGKISVGPPYFNKFFIPLMGVLCILLAVGPLTNY 415 Query: 419 K----------LIFIFLGIIIIGGIRGFPEIFLALY--------FFIYLLLFTLILIIKQ 460 K L + F+ +++G + P ++ Y F ++ ++ Sbjct: 416 KRSSEKELFQWLRWPFVAAVVLGAL--VPWLYETPYVWQASIAVFIASWMVLAAARDLRN 473 Query: 461 K------------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 K F+ + H ++ + +++Y EE + S GK+L + + Sbjct: 474 KTRHSATLWAGLKKLSVSYFAMHLAHLGMAVTLIGVAFVSLYAEERDVRMSAGKSLDI-E 532 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + ++ + NYL+ L++ +++ + +KR YL + T++ Sbjct: 533 GYHFELTEIRQVRGPNYLADEAVILVSKG------DDLIAEMRPQKRKYLSGGNLMTEAA 586 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSLF 613 I L D+Y+ +G+ + W R+ F PF+ W WLG IF+ + I +L+ Sbjct: 587 IDAGLFRDLYVAMGEPLGDGDWAMRVHFKPFVRWIWLGAIFMTLAGIATLW 637
ref|ZP_04679782.1| cytochrome c-type biogenesis protein CcmF [Ochrobactrum intermedium LMG 3301] gb|EEQ95288.1| cytochrome c-type biogenesis protein CcmF [Ochrobactrum intermedium LMG 3301] (663 aa) Score: 195 bits (496), Expect: 5.02597e-47 Length: 599, Idn/Pos/Gap = 159/267/73 (26%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L F+ TF + + + Sbjct: 62 VVSDFSVLNVVENSHSQKPLLYKITGVWGNHEGSMLLWVFI-----LTFFSALVAAFSGN 116 Query: 125 VKLTFFYNVYFIL--FNISFLSLTLLLIFLRFDFFFNFTV-LEGNELNFLLQDINILIHP 181 + T NV + ++FL+ ++F F F +EG +LN +LQDI + IHP Sbjct: 117 LPETLRANVLAVQGWIGVAFLAF---IVFTSNPFTRIFPAPMEGGDLNPILQDIGLAIHP 173 Query: 182 PLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTE 239 PL+Y+ Y +S+ FS + L+ + + + +R L+ W + I +GS WAY E Sbjct: 174 PLLYLGYVGFSVCFSFAVAALL-EGRLDAAWARWVRPWALVAWMFLTGGIAMGSYWAYYE 232 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL+ ALLHS L+ K +++ ++ L + + + ++G L Sbjct: 233 LGWGGWWFWDPVENASFMPWLVGTALLHSALVMEKRSALKIWTVLLAILTFSLSLLGTFL 292 Query: 300 VRSGLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFV 356 VRSG+L SVH+F P F++ L F+ L + ++ T ++ V Sbjct: 293 VRSGVLTSVHSFATDPGRGLFILAILAIFIGGSLSLFALRVQSLTAGGIFHPISREGALV 352 Query: 357 YYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN-------------------- 396 + L L+ LY P L++ + + FFN Sbjct: 353 FNNLFLTTAAATVLIGTLY-PLLLEVMTGDKISVGAPFFNMTFGPLMIPLLFAVPFGPLL 411 Query: 397 ------------KILLLFIGILLTLIIIFLINSWKLIFIFLGI-----IIIGGI------ 433 +++ F L+ I+ S K + GI +I G + Sbjct: 412 AWKRGDLYGVSQRLMTAFALSLVAAAIVLWSTSAKSVLAACGIGLAAWLIFGSLTDLVLK 471 Query: 434 RGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFS 493 G ++ + F + L + F + H +L ++ +T +G E +L Sbjct: 472 AGIGKVSASKAFARFKGL------PRSVFGTALAHIGLGVTLLGIVSVTTFGTENVLIMR 525 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 G T + D + + F L + +N+ G F + D + I+ KRF+ Sbjct: 526 PGDTARVQD-YTLRFEGLRPLTGSNFTENRGTFTLLDSSS-RSLGQIE----PSKRFFPA 579 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 + + T+S I T S VY+ LGD + RI + P ++ W G + ++ +FSL Sbjct: 580 RQMPTTESGIKTLWFSQVYVALGDEPGDGSVVVRIWWKPDVTLIWYGALVMMVGALFSL 638
ref|ZP_10465667.1| cytochrome c-type biogenesis protein CcmF [Bartonella tamiae Th239] ref|ZP_17691356.1| cytochrome c-type biogenesis protein CcmF [Bartonella tamiae Th307] gb|EJF90584.1| cytochrome c-type biogenesis protein CcmF [Bartonella tamiae Th239] gb|EJF94038.1| cytochrome c-type biogenesis protein CcmF [Bartonella tamiae Th307] (678 aa) Score: 195 bits (495), Expect: 5.98848e-47 Length: 603, Idn/Pos/Gap = 170/278/83 (28%/46%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL--- 121 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L + L + T + +F +L Sbjct: 62 IVSDFSVLNVVENSHSEKPLLYKITGVWGNHEGSMLL-WVLIVSFFSTLVGFFGRELPAR 120 Query: 122 --TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 LI+ + F+LF I F S F R D L+GN+LN +LQDI + I Sbjct: 121 LKALILGCQAWVTSAFLLF-ILFTSNP----FQRVDP----PALQGNDLNPILQDIGLAI 171 Query: 180 HPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 HPPL+Y+ Y +S+ FS + LI + +R L+ W + I++GS WAY Sbjct: 172 HPPLLYLGYVGFSVCFSFAIAALIDGRVDAAWARWVRPWTLVSWLFLTGGIMVGSYWAYY 231 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE SL+PWL ALLHS ++ K +++ +LFL + + + ++G Sbjct: 232 ELGWGGYWFWDPVENASLMPWLAGTALLHSAIVLEKRGALKIWTLFLAILTFSLSLMGTF 291 Query: 299 LVRSGLLQSVHTFVNSP---NFLIIFLYFFL---VFIFILIVILLKKYTYFTSIFDLNNH 352 LVRSG+L SVH+F P ++ L+FF+ +F+F L LK +F ++ Sbjct: 292 LVRSGILTSVHSFAVDPLRGRAILAILFFFIGAALFLFALRASSLKTGGFFRP---MSRE 348 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIII 412 V+ L + LY P L++ + FFN L F +++ L+I+ Sbjct: 349 GLLVFNNLFLTTATATVFVGTLY-PLLLETLTGQKISVGAPFFN---LTFGPLMIPLLIL 404 Query: 413 FLIN---SWK----------------LIFIFLGIIIIGG-IRGFPEIFLALYFFIYLLLF 452 +WK L FI +G+++ +R EI AL + +F Sbjct: 405 VSFGPMIAWKRGDFFAVAEKLWFAFGLAFIMIGVVLYKTYLR---EILAALGIGLATFVF 461 Query: 453 -----------------------TLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFI 489 L + + + + H + ++ + +G+E I Sbjct: 462 FGGITDLWYKSGLGSTSLRVRFKRLCGLPRSAYGTALAHMGLGVTLFGIIAVATFGQERI 521 Query: 490 LNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKR 549 L G + + + ++ + ++ NY T F I + + +V+ + KR Sbjct: 522 LIMQTGDKIEIAER-LVTLKGARNVNGPNYTETQFEFGIENGQ-----RKVGDVM-AAKR 574 Query: 550 FYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSII 609 FY Q + T++ I + +S +YI GD + G I + P++ WLG I ++ Sbjct: 575 FYPSQKMPTTEAGIQSRGLSQLYIAPGD-ITDQGLILHIWWKPYVICIWLGAIMMMLGGC 633 Query: 610 FSL 612 SL Sbjct: 634 MSL 636
ref|ZP_10469782.1| cytochrome c-type biogenesis protein CcmF [Bartonella taylorii 8TBB] gb|EJF92858.1| cytochrome c-type biogenesis protein CcmF [Bartonella taylorii 8TBB] (660 aa) Score: 195 bits (495), Expect: 6.45549e-47 Length: 606, Idn/Pos/Gap = 176/283/87 (29%/46%/14%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L + + + + T + +F L Sbjct: 62 IVSDFSVLNVVENSHSEKPMLYKITGVWGNHEGSMLL-WVVSLVFFSTLMAFFSQHLPEQ 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL--IFLRFDFF-FNFTVLEGNELNFLLQDINILIHP 181 K IL S+++ T LL +F+ F + L+G +LN LLQDI + IHP Sbjct: 121 FK-------ALILICQSWITSTFLLFILFMSNPFLRVHPPALQGKDLNPLLQDIALAIHP 173 Query: 182 PLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PL+Y+ Y +S+ FS + LII + + ++ +L L+ W + I++GS WAY E Sbjct: 174 PLLYLGYVGFSLCFSFAVAALIIGHVDRLWARWVRPWL-LLSWCFLTLGIMVGSYWAYYE 232 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE +S +PWL A LHS L+ K ++ +LFL + + + ++G L Sbjct: 233 LGWGGYWFWDPVENVSFMPWLSGTAFLHSALVLEKRETLKSWTLFLALLTFSLSLMGTFL 292 Query: 300 VRSGLLQSVHTFVNSPN---FLIIFLYFF---LVFIFILIVILLKKYTYFTSIFDLNNHY 353 VRSGLL SVH+F P ++ L+FF + +F L V +LK +F I + Sbjct: 293 VRSGLLTSVHSFAVDPERGRAILALLFFFTGGALLLFALRVPVLKTGKFFQPI----SRE 348 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN----------------- 396 F+ LL+ +L +P+ + + FFN Sbjct: 349 GFIVLNNLLLTTIIATVLIGTLYPYFVDALTGQRISVGAAFFNLTCGPLMVLLLLLAPFG 408 Query: 397 ---------------KILLLFIGILLTLIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFL 441 ++ L+F + I F S + IF LGI G+ F +FL Sbjct: 409 SMMAWKRGDFHAVFERLWLVFALVCAVCFITFYAKSLRDIFAALGI----GLSAF--VFL 462 Query: 442 A----LYFFIYLLLFTLILIIKQ-------KFSFIVYHFNFFFIMLSLLLITIYGEEFIL 490 L+ +L++ +K+ F + H + ++ + +G+E IL Sbjct: 463 GSLADLWGKSGHRKLSLLIRVKRLIGLPWSVFGAAMAHMGLGVTLFGIICVASFGQERIL 522 Query: 491 NFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYEN---IQNVLFSE 547 IG + + + F ++ + NY + NF I YEN ++NV S Sbjct: 523 TMHIGDKVAIAGK-TLHFDEVRNGAGPNYSAIEFNFTI--------YENEDAVRNVTAS- 572 Query: 548 KRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDS 607 KRFY Q++ T+ I + +S +YI+ G + + G I + P+I WLG + + Sbjct: 573 KRFYSSQNISTTEVGIQRHGLSQLYIVPGRID-DRGLVLHIWWKPYIMCVWLGALMMAMG 631 Query: 608 IIFSLF 613 SLF Sbjct: 632 GCLSLF 637
ref|ZP_01167361.1| Cytochrome c-type biogenesis protein CcmF [Neptuniibacter caesariensis] gb|EAR60545.1| Cytochrome c-type biogenesis protein CcmF [Oceanospirillum sp. MED92] (651 aa) Score: 194 bits (494), Expect: 7.75621e-47 Length: 590, Idn/Pos/Gap = 149/265/64 (25%/44%/10%) Query: 60 IGIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL-----GYFLQFIIYFTFI 114 +G + DFS+++V S+ P YK+ +W +EGSL L G + + + Sbjct: 57 LGYAFVTDDFSVVYVATNSNTALPIYYKISAIWGGHEGSLLLWVVILGAW-TWAVAVKSD 115 Query: 115 NYFINKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQD 174 N ++ + ++ + +V FILF LL F+ EG +LN LLQD Sbjct: 116 NLPLDIVARVLSVMGIISVGFILFT--------LLTSSPFERHLPRFPQEGGDLNPLLQD 167 Query: 175 INILIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLG 232 I +++HPP++Y+ Y +S+ F+ ++ + + R ++ W + I LG Sbjct: 168 IGLILHPPMLYMGYVGFSVAFAF-AIAALLSGRLDAAWARWSRPWTVVAWAFLTLGIALG 226 Query: 233 SRWAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFV 292 S WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L + + + Sbjct: 227 SWWAYYELGWGGWWFWDPVENASFMPWLVGTALVHSLAVTEKRGVFKSWTVLLAIFAFSL 286 Query: 293 IIIGIILVRSGLLQSVHTFVNSP--NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLN 350 ++G LVRSG+L SVH F P + I+ L + +L+ + + S F L Sbjct: 287 SLLGTFLVRSGVLTSVHAFATDPERGYFILALLAITIGGSLLLYAIKAAHVKSESSFQLL 346 Query: 351 NHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLI 410 + F+ +L+ + L +L +P LI + +FN + + + I++ + Sbjct: 347 SRETFLLGNNILLFIAALMVLLGTLYPLLIDALGQGKISVGPPYFNALFIPIMSIMVGFM 406 Query: 411 IIFLINSWK----------LIFIFLGIIIIGGIRGFPEIF-----------LALYFFIYL 449 +++ W+ L+ F+G +I+G GF ++ + L F+I L Sbjct: 407 GFGIVSRWRKTKGDFLVKQLLMPFVGCLILGA--GFSVVYGGEFDWYVTLGMVLVFWISL 464 Query: 450 ---------------LLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSI 494 + L + + ++ ++ H ++ + L++IY EE L + Sbjct: 465 VSIRDIWNKVGHRSSIAAGLRGLSRSYYAMVLAHIGVAVTIVGMTLVSIYNEERDLRMAP 524 Query: 495 GKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQ 554 G L + IF + + NY+S + + Y L EKR Y + Sbjct: 525 GDKLSFK-QYEFIFDGASKVQGPNYVSDQARIRV--LKDGEAYGE----LLPEKRLYTAR 577 Query: 555 SLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ + D+Y+ LG+ W RI PF+ W WLGG+ + Sbjct: 578 GNVMTEAALDPGFTRDLYVALGEPLPGGAWAVRIQHKPFVRWLWLGGLLM 627
ref|YP_004676154.1| cytochrome c-type biogenesis heme lyase CycK [Hyphomicrobium sp. MC1] emb|CCB65586.1| cytochrome c-type biogenesis protein CycK; heme lyase [Hyphomicrobium sp. MC1] (659 aa) Score: 194 bits (494), Expect: 8.71727e-47 Length: 582, Idn/Pos/Gap = 157/255/60 (26%/43%/10%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 SDFS+L V E S +P +YK+ +W N+EGS+ L + L ++ + F N L +K Sbjct: 64 SDFSVLNVAENSHSTKPLIYKMAGVWGNHEGSMLL-WVLILALFGAAVALFGNNLPPTLK 122 Query: 127 LTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 I ++FL +LL F+R D + +GN LN +LQD + HPP + Sbjct: 123 ARVLSVQASIA--VAFLLFSLLTSNPFVRLDPAPS----DGNGLNPILQDPALAFHPPFL 176 Query: 185 YISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELGW 242 Y Y +SI FS + LI + + + +R L W + I +GS WAY ELGW Sbjct: 177 YTGYVGFSIAFSFAIAALI-EGRIDAAWARWVRPWTLAAWMFLTIGISMGSWWAYYELGW 235 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GG+WFWD VE S +PWL ALLHS L+ K +++ ++ L + + + ++G +VRS Sbjct: 236 GGWWFWDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAILTFSLSLMGTFIVRS 295 Query: 303 GLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYI 359 G+L SVH+F P F++ L FF L + K ++ + V Sbjct: 296 GVLTSVHSFAVDPARGVFILAILVFFTGGGLALFALRAKDMQAGGLFQPISREGSLVLNN 355 Query: 360 FLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN----------------------- 396 LLV L+ LY P ++ + FFN Sbjct: 356 LLLVTATATVLVGTLY-PMALEGLTGEKISVGPPFFNMTFGPLMIPLLIALPFGPMLAWK 414 Query: 397 ---------KILLLFIGILLTLIIIFLI---NSWKLIF-IFLGI-IIIGGIRGFPEIFLA 442 ++ F+ L+T++ +F + W F I LG+ +++G I + Sbjct: 415 RGDLLGAMQRLAFAFLAALVTIVAVFAVEHRGPWLAPFGIALGVYVMVGAIVEWANRVKL 474 Query: 443 LYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 ++ + + + + HF +M+ ++ + Y EE IL G +++ D Sbjct: 475 GSAGRDEVMRRASNLPRSAYGTLFAHFGVGMLMVGIVATSAYREEHILAMKPGDKVMV-D 533 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + + F + NY I DF+ E I L KR Y T++ Sbjct: 534 GYEVTFAKVERGRGPNYTED-----IADFNVKRNGETIAT-LQPAKRLYDAPPQPTTEAG 587 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 I+ D+Y+++GDG G+ R F P + + WLG +F+ Sbjct: 588 IHAAWRGDLYVVIGDGQPGGGYAVRAYFNPLVRFIWLGALFM 629
ref|YP_001156291.1| cytochrome c-type biogenesis protein CcmF [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP34727.1| cytochrome c-type biogenesis protein CcmF [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] (639 aa) Score: 194 bits (494), Expect: 9.79741e-47 Length: 585, Idn/Pos/Gap = 165/271/75 (28%/46%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+L+V E S+ P +Y+L +W +EGSL L FL + +T L+ Sbjct: 63 VNDFSVLYVAEHSNSQLPVIYRLGAVWGGHEGSLLLWIFL--LSTWTI---------LVA 111 Query: 126 KLTFFYNVYFILFNISFLSL---TLLLIFLRFDFFFNF---TVLEGNELNFLLQDINILI 179 +L+ + + + I L L LLL L F +G LN LLQD ++ Sbjct: 112 QLSKALDEFMVARVIGVLGLVASGLLLFVLTTSNPFERLLPAAQDGRSLNPLLQDPGLVF 171 Query: 180 HPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAY 237 HPP++Y+ Y +S+ F+ + L+ + + R W + I LGS WAY Sbjct: 172 HPPMLYMGYVGFSVAFAFAIASLL-SGRLDAAWARWSRPWTTAAWVFLTLGIALGSWWAY 230 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE S +PWL+ ALLHSL + K + ++ L + + + ++G Sbjct: 231 YELGWGGWWFWDPVENASFIPWLVGTALLHSLAVTEKRGGFKSWTVLLAITAFSLSLLGT 290 Query: 298 ILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVY 357 LVRSG+L SVH F P I F L+F+ +++ L Y + L +N Sbjct: 291 FLVRSGVLTSVHAFATDPRRGI----FILIFLSLVVGSSLTLYAWRAPKSSLGGKFNLSS 346 Query: 358 ---YIFL----LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLI 410 +I L LV+ LL LY P LI + + +FN + F+ I++ L+ Sbjct: 347 RETFILLGNVFLVVSAGSVLLGTLY-PLLIDALHLGKISVGPPYFNSV---FVPIMVPLL 402 Query: 411 IIFLINSW------------KLIFIFLGIIIIGGIRGFPEI---FLALYFFIYLLLFTLI 455 ++ I W K +++ + +I G+ P I F L +LL F +I Sbjct: 403 VLMGIGPWTNWKNTNLILVIKRLWLAGLVAVIAGVL-IPLIMGQFTWLAGLGFLLAFWVI 461 Query: 456 L-----IIKQK------FSFI---VYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN 501 I++Q SFI + H ++ + ++ Y EE + G+++ + Sbjct: 462 ASGCMQIVRQAKAGKPTRSFIGMQIAHLGIAIFVIGVTMVGAYQEEKDVRMLAGESVTVG 521 Query: 502 DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENI-QNVLFSEKRFYLYQSLINTK 560 + I + +N + NY + G+FL++ + + Q L EKR Y ++ T+ Sbjct: 522 -GYQIQLQGVNPVAGPNYKAIRGSFLLSK-------DGVAQATLNPEKRSYFSSTMPMTE 573 Query: 561 SIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 + I L D+Y+ LG+ + W R+ + PF+ W W GG L+ Sbjct: 574 AAINAGLTRDIYVSLGEELDDKSWAVRVYYKPFVDWIW-GGCLLM 617
ref|ZP_18917661.1| Cytochrome c heme lyase subunit CcmF [Caenispirillum salinarum AK4] gb|EKV32219.1| Cytochrome c heme lyase subunit CcmF [Caenispirillum salinarum AK4] (667 aa) Score: 194 bits (494), Expect: 1.00458e-46 Length: 591, Idn/Pos/Gap = 157/262/79 (26%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS++ V + S ++P LYK+ +W N+EGSL L + + Y + +F L Sbjct: 62 VVSDFSVINVAQNSHTDKPMLYKISGVWGNHEGSLLL-WITILVTYSVAVAFFGRNLPPA 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFTVLEGNELNFLLQDINILIHPP 182 ++ I FL LL FLR D ++GN LN LLQD + HPP Sbjct: 121 LRARTLAVQGMITGG--FLLFILLTSNPFLRLDP----APIDGNGLNPLLQDPGLAFHPP 174 Query: 183 LIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTEL 240 ++Y+ Y +S+ FS + LI + K + +R L+ W + I LGS WAY EL Sbjct: 175 MLYLGYVGFSMAFSFAVAALI-EGKVDAAWARWVRPWTLLAWTFLTLGIALGSWWAYYEL 233 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+W+WD VE S +PWL ALLHS ++ K ++ ++ L + + + ++G LV Sbjct: 234 GWGGWWYWDPVENASFMPWLAGTALLHSAVVVEKRDALKSWTILLAILTFGLSLLGTFLV 293 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVIL------LKKYTYFTSIFDLNNHYN 354 RSG++ SVH F + P + L V + +++ LK F I + + Sbjct: 294 RSGIITSVHAFASDPTRGMFILLLMGVSLGGALLLYALRAPDLKGGGLFAPI---SREGS 350 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 + L+ LL LY P N + FFN + F+ +++ L+I Sbjct: 351 LLLNNLLMATATATVLLGTLY-PVFADALNLGKVTVGPPFFNAV---FVPLMIPLVIAMG 406 Query: 415 IN---SWKLIFIFLGI------------------IIIGGIRGFPEIFLALYF--FIYLLL 451 SWK + + ++ GG ++ A F ++LL+ Sbjct: 407 FGPMLSWKRGDLAGALSRLKAAAGAALLAFGLAWVLAGGA--LDDVLAAFGFGLAVWLLV 464 Query: 452 FTLILIIKQ---------------------KFSFIVYHFNFFFIMLSLLLITIYGEEFIL 490 TL+ + ++ F + H FI+ + + Y +E + Sbjct: 465 ATLVELAERVKLFKAPLAESGRRFARLPRAAFGMTLAHLGMAFIVAGVTAASAYKQESVQ 524 Query: 491 NFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRF 550 G+T+ + + F+ + NY + G+F +T P+ L EKR Sbjct: 525 VMVAGQTITVA-GYEFTFQGAERVEGPNYSAVKGHFGVTKDGEPIAQ------LDPEKRE 577 Query: 551 YLYQSLINTKSIIYTNLMSDVYILLGDGNFEN-GWYSRILFMPFISWFWLG 600 Y + T++ I+TN +D+Y ++GD N + G+ +RI F P + + W G Sbjct: 578 YTSPPMPTTEAAIHTNGWADLYAVVGDPNEDGPGFVTRIYFEPLVPFLWYG 628
ref|ZP_09620137.1| cytochrome c-type biogenesis protein CcmF [Legionella drancourtii LLAP12] gb|EHL31452.1| cytochrome c-type biogenesis protein CcmF [Legionella drancourtii LLAP12] (647 aa) Score: 194 bits (492), Expect: 1.39093e-46 Length: 598, Idn/Pos/Gap = 157/274/81 (26%/45%/13%) Query: 59 LIGIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFT-FINYF 117 L+ + L DFS+++V+ SS+ P YKL +W +EGS+ L ++ + ++T + +F Sbjct: 56 LLTVCFLKDDFSVIYVMSNSSLALPWFYKLCAVWGGHEGSMLL--WVAILSFWTLMVAFF 113 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFD--FFFNFTVL--EGNELNFLLQ 173 + L ++ +L + +LS+ +L L F F +L G +LN LLQ Sbjct: 114 SSGLDKEMRTR-------VLVVLGWLSIGFILFLLTTSNPFLRQFQILNTPGRDLNPLLQ 166 Query: 174 DINILIHPPLIYISYASYSIIFSISFTIL-IIKCKFYVLYILRFLNLIGWFIASFSILLG 232 D L HPP++Y+ Y +S+ F+ + L K + R L W + I LG Sbjct: 167 DPGFLFHPPMLYMGYVGFSVAFAFAIAALWAGKVETSWSKWTRPWTLAAWCCLTAGITLG 226 Query: 233 SRWAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFV 292 S WAY ELGWGG+WFWD VE S +PW++ ALLHSL + + + ++ L +A + + Sbjct: 227 SWWAYRELGWGGWWFWDPVENASFMPWVVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSL 286 Query: 293 IIIGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSI 346 +IG LVRSG+L SVH F P + L F L+ I F+ L+ T + + Sbjct: 287 SLIGTFLVRSGVLTSVHAFAVDPQRGLYILGFLLLVIGGSLLLFLFRAQTLQTTTSPSPV 346 Query: 347 FD-----LNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLL 401 LNN +FL+VI+ L +L +P L++ L +FN + Sbjct: 347 SRESALLLNN-------VFLVVIM--LTVLMGTVYPLLVEGLGLGKLSVGAPYFNAV--- 394 Query: 402 FIGILLTLIIIFLI--------NSWKLIFIFLGIIIIGGIRGFP-------------EIF 440 F+ +++ ++++ + ++W+++F L + + I P Sbjct: 395 FVPLMIPMLLLMGLGIHLKWNNDNWRVLFKNLSRVALLSIV-LPVALLLLTHHEFAASAL 453 Query: 441 LALYFFIYLLLFTLILIIKQK-------------FSFIVYHFNFFFIMLSLLLITIYGEE 487 + L +++L T + K+ + ++ HF ++ + + T YG + Sbjct: 454 IGLILATWIILSTTRAVAKRAKDRGGLIHVGQSYWGMVLAHFGVAATVIGIAVSTTYGVQ 513 Query: 488 FILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSE 547 + G + L + + I F + + NY T F I+ +++ V++ E Sbjct: 514 DDVQMEPGSKIDL-EGYSIEFVNQKPLVGPNYKGTQAQFKIS-------HQDQTKVIYPE 565 Query: 548 KRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 KR Y + T+S I D+Y+ LG+ + W R+ + PF+ W W GG +L Sbjct: 566 KRLYTIGQMAMTESAIDVTPFRDIYVALGEPLSNDSWSVRLYYKPFVRWIWAGGFMIL 623
ref|YP_001534745.1| cytochrome c-type biogenesis protein CycK [Dinoroseobacter shibae DFL 12] gb|ABV95144.1| cytochrome c-type biogenesis protein CycK [Dinoroseobacter shibae DFL 12] (664 aa) Score: 193 bits (491), Expect: 1.78654e-46 Length: 600, Idn/Pos/Gap = 168/273/73 (28%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDF+++ VV S +P +YK+ W ++EGSL L + L I+ + + Sbjct: 62 IVSDFTVVNVVANSHSLKPMIYKVAATWGSHEGSLLL-WVLILAIFGAGVAVLGKNIPAE 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLR--FDFFFNFTVLEGNELNFLLQDINILIHPP 182 ++ +I ++ FLS +IF FD F L GN+LN LLQDI + +HPP Sbjct: 121 LRARTLSVQAWI--SVGFLSF---MIFTSNPFDRMFP-APLNGNDLNPLLQDIGLALHPP 174 Query: 183 LIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELG 241 L+Y+ Y +SI+FS + LI + +R L W + I LGS WAY ELG Sbjct: 175 LLYLGYVGFSIVFSFAVAALIEGRVDPAWARWVRPWTLAAWVSLTGGIALGSWWAYYELG 234 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE +S +PWLL ALLHS ++ K + ++ L + + + ++G +VR Sbjct: 235 WGGWWFWDPVENVSFMPWLLGTALLHSAIVTEKRDTFKSWTILLAILTFSLSLLGTFIVR 294 Query: 302 SGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF- 360 SGLL SVH F P + + L +F+ I L Y + + + + Sbjct: 295 SGLLTSVHAFAVDPERGV----YILGLLFVSIGGSLALYAWRAPQLEGGGLFTPISREAG 350 Query: 361 -----LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLI 415 LL+ +LF +P ++ + + FFN FI I+L L+ + I Sbjct: 351 LLINNLLLATATAAVLFGTLYPLFLEAVTGDKISVGPPFFNAS---FIPIMLPLVFMMGI 407 Query: 416 N---SWKLI-----------FIFLGI-----------------IIIGGIRGFPEIFLALY 444 SWK I LG+ II G+ G+ + A Sbjct: 408 GPFLSWKRADLPGVMSRLKFAIGLGLIAALWAWWMDTDGPVLAIIAMGVAGWLLVASARE 467 Query: 445 FFIYLLLFTLIL---------IIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIG 495 + + + L + + + H ++L ++ + + E IL S G Sbjct: 468 WLSRIKAGEVPLAESLRRAKNLPRAAHGMTIAHMGVAVLILGMVGSSAWKTEQILFASPG 527 Query: 496 KTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 T++ + + F + + NY+S G +T F + E + VL E+R+Y Sbjct: 528 -TVVEIAGYEVRFDRVERVRGPNYVSDMGT--LTAFRD---GEQVA-VLQPERRWYPVAE 580 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFE---NGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 + T+S I + L D+Y+ +G+ + N W RILF PF+++ W+G +FL+ FSL Sbjct: 581 MQTTESAIRSTLAGDLYVTIGEPAADRASNEWTLRILFEPFVNFIWIGTVFLVIGGTFSL 640
ref|ZP_11157511.1| cytochrome c-type biogenesis protein CcmF [Nitratireductor indicus C115] gb|EKF40652.1| cytochrome c-type biogenesis protein CcmF [Nitratireductor indicus C115] (666 aa) Score: 193 bits (491), Expect: 1.86265e-46 Length: 595, Idn/Pos/Gap = 161/264/65 (27%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +LSDFS+L V E S +P LYK+ W N+EGS+ L +++ F + Sbjct: 62 VLSDFSVLNVWENSHSAKPLLYKITGTWGNHEGSMLL-----WVLILAFFGALVALFGRN 116 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFF--FNFTVLEGNELNFLLQDINILIHPP 182 + LT NV + I S LL I + + F + ++G +LN +LQD+ + +HPP Sbjct: 117 LPLTLRANVLGVQGAIG--SAFLLFILMTSNPFTRLDPAPMQGRDLNPILQDVGLAVHPP 174 Query: 183 LIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTEL 240 L+Y+ Y +S+ FS + LI + + + +R L W + I +GS WAY EL Sbjct: 175 LLYLGYVGFSVSFSFAIAALI-EGRIDAAWARWVRPWTLAAWMFLTGGIAMGSYWAYYEL 233 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGGFWFWD VE SLLPWL ALLHS L+ K +++ ++ L + + + ++G LV Sbjct: 234 GWGGFWFWDPVENASLLPWLGGTALLHSALVMEKRSALKIWTVLLAILTFSLSLLGTFLV 293 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIF---DLNNHYNFVY 357 RSG+L SVH F P + L ++FI + + + T+ ++ V Sbjct: 294 RSGVLTSVHAFATDPARGVFILGILMLFIGGSLALFAWRAGSLTAGGLFQPISREGALVL 353 Query: 358 YIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLIN- 416 +L L+ LY P LI+ + FFN L F ++L L+ I Sbjct: 354 NNLILTTATATVLIGTLY-PLLIEALLGEKISVGPPFFN---LTFGPLMLPLLAIVPFGP 409 Query: 417 --SWK----------LIFIFLGIIIIG----------GIRGFPEIFLALYFFIYLLL--- 451 +WK L F F +++ + G I L + + Sbjct: 410 LLAWKRGDLWAASQRLFFAFGAALLVAMLAYVVIDPSSVLGAAGIGLGAWLVLGAATDIV 469 Query: 452 --------------FTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 LI + + F + H M+ + ++ EE I+ G+T Sbjct: 470 LKSGFGKATGAVAWRRLIGLPRSVFGTALAHAGLGLTMIGIAAVSTQQEERIVALQPGET 529 Query: 498 LLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + ++ F++ F L NY +F++ N + + + V+ S KR Y + + Sbjct: 530 VEIH-GFVLRFESLRPFTGPNYTEDQAHFVL----NRVTGKPLGAVV-SAKRLYQARQMP 583 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 T++ I T +S +Y+ LGD R+ + PF++ WLG + ++ SL Sbjct: 584 TTEAGIRTLGLSQLYVSLGDRTPNGALVVRVWWKPFVTLIWLGALVMMAGGAVSL 638
ref|ZP_08553142.1| cytochrome c-type biogenesis protein CcmF [Salinisphaera shabanensis E1L3A] ref|ZP_08553475.1| cytochrome c-type biogenesis protein CcmF [Salinisphaera shabanensis E1L3A] gb|EGM27443.1| cytochrome c-type biogenesis protein CcmF [Salinisphaera shabanensis E1L3A] gb|EGM28684.1| cytochrome c-type biogenesis protein CcmF [Salinisphaera shabanensis E1L3A] (656 aa) Score: 193 bits (491), Expect: 1.97468e-46 Length: 569, Idn/Pos/Gap = 150/248/50 (26%/43%/8%) Query: 68 DFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVKL 127 DFS+ +V S+ P Y+L +W +EGSL L ++ + ++ ++ TL ++ Sbjct: 65 DFSVAYVAANSNTQLPWFYRLAAIWGAHEGSLLL--WMTLLACWSLAVALASR-TLPREV 121 Query: 128 TFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTV-LEGNELNFLLQDINILIHPPLIYI 186 ++ FL TL F F F +EG +LN LLQD +++HPP++Y+ Sbjct: 122 ASCVLAVMGAVSVGFLLFTL---FTSNPFERQFPAPVEGRDLNPLLQDPGLVVHPPMLYM 178 Query: 187 SYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWGGF 245 Y +++ F+ + T LI + R W + + LGS WAY ELGWGG+ Sbjct: 179 GYVGFAVAFAFAITALITGRVDSAWTRWTRPWTTAAWVFLTIGVTLGSWWAYNELGWGGW 238 Query: 246 WFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSGLL 305 WFWD VE S +PWL+ AL+HSL + K I + ++ L + + + ++G LVRSG+L Sbjct: 239 WFWDPVENASFMPWLVGTALIHSLAVTEKRGIFKSWTVLLAITAFALSLLGTFLVRSGVL 298 Query: 306 QSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFL---- 361 SVH F P I L FF V + +++ + F S + + + L Sbjct: 299 ISVHAFATDPTRGIYILTFFAVVVGGSLLLYALRAAQFESGREPVAALSREGLLLLNNIF 358 Query: 362 LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWK-- 419 LV+ LL LY P L + +FNK+ + L+ LI + +WK Sbjct: 359 LVVAAAGVLLGTLY-PILADSLGMGRISVGPPYFNKVFIPLTAPLVVLIGAAAVMAWKRT 417 Query: 420 -------------LIFIFLG-------------IIIIGGIRGFPEIFLALYFFIYLLLFT 453 LI I +G + + G + G I A + Sbjct: 418 RADVLRSRLWAPLLISIAVGVALPLLTVGTGALVAVAGCVLGCWAIATAFEDIVRRSRGR 477 Query: 454 LILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGK-TLLLNDNFIIIFRDLN 512 +++ + + H ++ + L++ +G E + + G+ T ++ +F F Sbjct: 478 RVMLPRNVVGMALSHAGVGIFVIGVSLVSGFGSEHDVRLAPGESTEMVGYDF--TFVGTR 535 Query: 513 HIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSIIYTNLMSDVY 572 H+ N+ + G+F++ E I L+ KR Y T+S I D+Y Sbjct: 536 HVDGPNFTAEIGDFIVRKDG-----EQIAE-LYPAKRRYNAAGQTMTESGIDIGFTRDLY 589 Query: 573 ILLGDGNFENGWYSRILFMPFISWFWLGG 601 + LG+ + W RI PF+ W W GG Sbjct: 590 VSLGEPLSGDAWSVRIYHRPFVRWIWAGG 618
emb|CBI80536.1| cytochrome C-type biogenesis protein [Bartonella sp. 1-1C] (650 aa) Score: 193 bits (491), Expect: 1.97468e-46 Length: 603, Idn/Pos/Gap = 184/291/83 (30%/48%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+L VVE S +P LYK++ +W N+EGS+ L + L + T I F +L Sbjct: 58 IVSDFSVLNVVENSHSEKPMLYKIVGVWGNHEGSMLL-WVLLLAFFSTLIALFSPQLQEQ 116 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFF-FNFTVLEGNELNFLLQDINILIHPPL 183 K +I+ +FL L ++F+ F + VL+GN+LN +LQDI++ IHPPL Sbjct: 117 FKALVLSCQSWII--SAFL---LFILFMSNPFVRVHSPVLQGNDLNPVLQDISLAIHPPL 171 Query: 184 IYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ FS + LII K + +I ++ L+ W + I +GS WAY ELG Sbjct: 172 LYLGYVGFSVCFSFAIAALIIGYLNKIWACWIRPWV-LLAWIFLTIGITVGSYWAYYELG 230 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE +SL+PWL ALLHS+++ K ++R +LFL + + + ++G LVR Sbjct: 231 WGGYWFWDPVENVSLMPWLSGTALLHSVIVFEKRNLLRSWTLFLAILTFSLSLMGTFLVR 290 Query: 302 SGLLQSVHTFVNSP---NFLIIFLYFFLVFIFILIVI---LLKKYTYFTSIFDLNNHYNF 355 SGLL S+H+F P ++ L+FF F+L VI +LK F I + F Sbjct: 291 SGLLMSMHSFAVDPARGKAILAILFFFTGGAFLLFVIRMPILKTGGLFHPI----SREGF 346 Query: 356 VYYIFLLVILYFLYLLFVLYFPFLIKCYNDN-----ALLF--SFGFFNKILLLFI--GIL 406 + LL+ +L +P+ + AL F +FG +LLLF+ G + Sbjct: 347 IILNNLLLTTATATVLIGTLYPYFFEALTGQKISVGALFFNLTFGSLMIVLLLFVPFGTM 406 Query: 407 L-----------------------TLIIIFLINSWKLIFIFLGI-----IIIGGI----- 433 + I F ++S + IF LG+ + +GG+ Sbjct: 407 MAWKRSDFFAVFERLWCVFALACVACFITFYVDSLRDIFAALGVGLAVFVFLGGLADLWS 466 Query: 434 -RGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNF 492 G+ ++ + +L L + F + H + ++ + +G+E IL Sbjct: 467 KSGYHKVSFRVRVKRFLGLPLSV------FGAALAHMGLGVTLFGIIWVATFGQERILTM 520 Query: 493 SIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYEN---IQNVLFSEKR 549 +G+T+ + I F ++++I +NY + NF I YEN I NV S KR Sbjct: 521 QVGETVTIAGK-TIRFDEVHNIAGSNYSAIKFNFKI--------YENKNVISNVTAS-KR 570 Query: 550 FYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSII 609 FY Q+ T+ I + S YI G N + G I + P++ W G + Sbjct: 571 FYSSQNKSTTEVGIQNHGFSQFYIAPGRIN-DQGLVVHIWWKPYVICIWFGAFMMAVGGG 629 Query: 610 FSL 612 FSL Sbjct: 630 FSL 632
ref|YP_004613885.1| cytochrome c-type biogenesis protein CcmF [Mesorhizobium opportunistum WSM2075] gb|AEH89791.1| cytochrome c-type biogenesis protein CcmF [Mesorhizobium opportunistum WSM2075] (661 aa) Score: 193 bits (491), Expect: 2.09345e-46 Length: 595, Idn/Pos/Gap = 162/260/67 (27%/43%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 SDFS+ V E S QP +YK+ W N+EGS+ L +++ TF + + Sbjct: 63 SDFSVASVWENSHSLQPLIYKITGTWGNHEGSMLL-----WVLILTFFGALVAAFGSNLP 117 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFFF---NFTVLEGNELNFLLQDINILIHPPL 183 T NV + I T L L F N +EG +LN +LQD+ + IHPPL Sbjct: 118 ATLRANVLAVQGAIG---ATFFLFILATSNPFIRLNPAPIEGRDLNPVLQDLGLAIHPPL 174 Query: 184 IYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +SI FS S LI + + + +R L+ W + I +GS WAY ELG Sbjct: 175 LYLGYVGFSICFSFSVAALI-EGRIDASWARWVRPWTLVAWMFLTGGIAMGSYWAYYELG 233 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGGFWFWD VE S +PWL ALLHS ++ K +++ +L L + + + ++G LVR Sbjct: 234 WGGFWFWDPVENASFMPWLAGTALLHSAIVMEKRSALKIWTLLLAILTFSLSLLGTFLVR 293 Query: 302 SGLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 SG+L SVH F P F++ L F+ L + K T ++ V Sbjct: 294 SGVLTSVHAFATDPTRGIFILCILTLFIGGSLSLFALRASKLTAGGLFHPISREGALVLN 353 Query: 359 IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN---------------------- 396 L L+ LY P +++ ++ + + FFN Sbjct: 354 NLFLTTATATVLVGTLY-PLVVEAFSSDKISVGAPFFNLTFAPLMVPLLVMVPFGPLLAW 412 Query: 397 ----------KILLLFIGILLTLII--IFLINSWKLIFIFLGI---IIIGGIRGFPEIFL 441 ++++ F G LLT ++ +F+ + L I +G+ +I+G + +I + Sbjct: 413 KRGDVFAVAQRLMVAFAGALLTALVTTLFIDGASVLAAIGVGLAVWLILGALT---DIAV 469 Query: 442 ALYFF---IYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTL 498 F ++ L+ + + F H L ++ +G E IL+ G+T+ Sbjct: 470 KAGFGNVTTGNMVRRLLGLPRSVFGTAFAHLGLGLTTLGIVGTLCFGTEKILSMHAGETV 529 Query: 499 LLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 L+ + + F L NY G F + E + S KRF+ + Sbjct: 530 ELSGH-TLRFVGLYPAQGPNYSEDRGRFELIGVSGSPIGE-----ISSAKRFFPVRQTTT 583 Query: 559 TKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSLF 613 T+S I T +S +YI LGD + R+ + P ++ W GG+ ++ SL Sbjct: 584 TESGIKTLGLSQLYISLGDEGKDGSVVVRLWWKPLVTLIWGGGLMMMAGAAMSLM 638
ref|ZP_10115705.1| c-type cytochrome biogenesis protein CcmF [Beggiatoa alba B18LD] gb|EIJ43310.1| c-type cytochrome biogenesis protein CcmF [Beggiatoa alba B18LD] (663 aa) Score: 193 bits (490), Expect: 2.35285e-46 Length: 585, Idn/Pos/Gap = 168/257/69 (28%/43%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 +DFS+ +V + S+ P +Y+++++W +EGSL L + L + + F L + Sbjct: 64 NDFSVSYVAQNSNSQLPLIYRIVSVWGGHEGSLLL-WVLTLGFWTVAVASFSRNLPPV-- 120 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNF---TVLEGNELNFLLQDINILIHPPL 183 V +L + F+S+ LL + F G +LN LLQD ++IHPP+ Sbjct: 121 -----TVARVLSVMGFISVGFLLFLIATSNPFERLADAPANGRDLNPLLQDPGLIIHPPM 175 Query: 184 IYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGW 242 +Y+ Y +S+ FS + L+ + R LI W + I LGS WAY ELGW Sbjct: 176 LYMGYVGFSVAFSFAIAALLSGQLDSAWARWSRPWTLIAWVFLTIGIALGSWWAYYELGW 235 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GG+WFWD VE S +PWL+ ALLHSL + K + ++ L + + + ++G LVRS Sbjct: 236 GGWWFWDPVENASFMPWLVGTALLHSLAVTEKRSAFKSWTVLLAIIAFSLSLLGTFLVRS 295 Query: 303 GLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFL- 361 G+L SVH F P F L+F+ I+I I L Y + H+ L Sbjct: 296 GVLTSVHAFATDPTRGT----FILIFLGIVIGISLFLYAWRAPSMGQGGHFELFSKETLL 351 Query: 362 ------LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLI 415 LV+ L+ LY P + N L +FNK+ + LL L+ I + Sbjct: 352 LLNNIFLVVTTACILIGTLY-PLFLDALNLGKLSVGPPYFNKVFFFLMAPLLILLGIGSL 410 Query: 416 NSWK---------------LIFIFLGIIII------GGIRGFPEIFLALYFFIYL-LLFT 453 WK L+ I LGI + G+ FP LA+ F+I L ++ Sbjct: 411 TRWKSDKPQRLIKQLWFLLLLSIVLGIAVPVFYLGEAGLIVFPG--LAVAFWILLTIVKD 468 Query: 454 LILIIKQKFSF--------------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLL 499 L+ K K SF + HF ++ + L Y E + L Sbjct: 469 LLEKTKHKPSFWQGLRDLPRSFYGMSIAHFGVAVFVVGVTLTNAYSVEEDVRLEPNVELD 528 Query: 500 LNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 + F IF HI +NY + + + VL EKR YL +++ T Sbjct: 529 VA-GFHFIFEKTEHIQGSNYTAERATVRVQKDGKDVT------VLHPEKRMYLVRTMPMT 581 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 ++ I L D+Y+ +G+ W RI + PFI W WLG + + Sbjct: 582 EAGIDAGLFRDIYVSMGEPLGGGAWSVRIYYKPFIRWIWLGALLM 626
ref|YP_001798098.1| cytochrome c-type biogenesis protein CcmF [Polynucleobacter necessarius subsp. necessarius STIR1] gb|ACB44484.1| cytochrome c-type biogenesis protein CcmF [Polynucleobacter necessarius subsp. necessarius STIR1] (639 aa) Score: 193 bits (490), Expect: 2.73413e-46 Length: 578, Idn/Pos/Gap = 161/262/61 (27%/45%/10%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+L+V E S+ P +Y+L +W +EGSL L FL + +T L+ Sbjct: 63 VNDFSVLYVAEHSNSQLPVIYRLGAVWGGHEGSLLLWIFL--LATWTI---------LVA 111 Query: 126 KLTFFYNVYFILFNISFLSL---TLLLIFLRFDFFFNF---TVLEGNELNFLLQDINILI 179 +L+ + + + I L L LLL L F +G LN LLQD ++ Sbjct: 112 QLSKALDDFMVARVIGVLGLVTSGLLLFVLTTSNPFERLLPAAQDGRSLNPLLQDPGLVF 171 Query: 180 HPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAY 237 HPP++Y+ Y +S+ F+ + L+ + + R W + I LGS WAY Sbjct: 172 HPPMLYMGYVGFSVAFAFAIASLL-SGRLDAAWARWSRPWTTAAWVFLTLGIALGSWWAY 230 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE S +PWL+ ALLHSL + K + ++ L + + + ++G Sbjct: 231 YELGWGGWWFWDPVENASFIPWLVGTALLHSLAVTEKRGGFKSWTVLLAITAFSLSLLGT 290 Query: 298 ILVRSGLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYN 354 LVRS +L SVH F P F++I L + +L K T F L++ Sbjct: 291 FLVRSDVLTSVHAFATDPKRGIFILILLSLVVGSSLLLYAWRAPKST-MGGKFSLSSREI 349 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 F+ + +++ +L +P LI + + +FN + + + LLTL+ I Sbjct: 350 FILLGNIFLVVSAGSVLLGTLYPLLIDALHLGKISVGPPYFNSVFVPIMVPLLTLMGIGP 409 Query: 415 INSWK---------------LIFIFLGI---IIIGGIRGFPEIFLALYFFIYLLLFTLIL 456 SWK + + GI +I+G + L F+I + + Sbjct: 410 WASWKQSNLLAIIKRLWLAAAVAVVAGIAIPLIMGQFTWLAGMGFMLAFWI--IASGCMQ 467 Query: 457 IIKQK------FSFI---VYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFIII 507 II+Q SFI V H ++ + ++ Y EE + S G T+ + + I Sbjct: 468 IIRQAKAGKPTRSFIGMQVAHLGIAVFVIGVTMVGAYQEEKDVRMSAGDTVTVG-GYQIQ 526 Query: 508 FRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSIIYTNL 567 + +N NY + G F ++ +P Q L+ EKR Y ++ T++ I L Sbjct: 527 LQSVNAERGPNYQAMRGTFFLSRDGSP------QISLYPEKRSYFSSTMPMTEAAIDAGL 580 Query: 568 MSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 D+Y+ LG+ + W R+ + PF+ W W GG L+ Sbjct: 581 TRDIYVSLGEELGDQSWVVRVYYKPFVDWIW-GGCLLM 617
ref|ZP_11149695.1| cytochrome c-type biogenesis protein CcmF [Alcanivorax sp. W11-5] gb|EKE34764.1| cytochrome c-type biogenesis protein CcmF [Alcanivorax sp. W11-5] (664 aa) Score: 192 bits (489), Expect: 3.28503e-46 Length: 580, Idn/Pos/Gap = 154/261/60 (26%/45%/10%) Query: 68 DFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVKL 127 DF++ +V S+ P Y+L +W +EGSL L ++ + L+ V Sbjct: 65 DFTLAYVANHSNSAMPWGYRLSAIWGGHEGSLLL-----WVWMLAAWGAAVALLSRSVPT 119 Query: 128 TFFYNVYFIL--FNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLIY 185 V ++ I FLS +L FD + L+G +LN LLQD +++HPP++Y Sbjct: 120 EMVARVLAVMGMVGIGFLSF-MLFTSNPFDRILPWFPLDGADLNPLLQDPGLIVHPPMLY 178 Query: 186 ISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWGG 244 + Y +S+ FS + L+ K R I W + I LGS WAY ELGWGG Sbjct: 179 MGYVGFSVAFSFAVAGLLAGKLDPVWARWARPWTTIAWACLTIGIALGSWWAYYELGWGG 238 Query: 245 FWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSGL 304 +WFWD VE SL+PWL AL+HSL + K + R ++ L + + + ++G LVRSG+ Sbjct: 239 WWFWDPVENASLMPWLAGTALIHSLAVAEKRNLFRAWTVLLAILTFSLSLLGTFLVRSGI 298 Query: 305 LQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFL 361 L SVH F N P F++IFL L I K T+ F L + F+ L Sbjct: 299 LTSVHAFANDPERGTFVLIFLALVAGGSLTLFAIRAPKLKN-TAGFRLLSRETFLLGNNL 357 Query: 362 LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWK-- 419 L++ +L FP + N + S +FNK + +L+ L+++ +I++WK Sbjct: 358 LLLTATFVVLLGTLFPLIGDALNLR-ISISAPYFNKFFVPLTLVLMALLVLGVISNWKSH 416 Query: 420 -------LIFIFLGIIIIGGI------RGFPEIF-LALYFFIYLLLFTLILIIKQKFSF- 464 + + I+GG+ G P + L L ++++ L ++++ +F Sbjct: 417 RADQFRRRVLPLIPAAIVGGLFAAWLPGGTPWLGTLGLIAVAWVVIGHLDDVVRKALAFR 476 Query: 465 -----------------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFIII 507 ++ H ++ ++L++ + E + G T + + Sbjct: 477 AGLLRGIGRLSNGYKGMVLAHCGLALLVAGVILVSHHEIERDVRMVPGDTAHVG-GYDFT 535 Query: 508 FRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFSEKRFYLYQSLINTKSIIYT 565 F D++ NY + G F ++ N + V + EKR Y + T+ + Sbjct: 536 FVDISPRQGPNYDAMRGTFEVS--------RNGRRVATMHPEKRTYRVGGQVMTQVALRP 587 Query: 566 NLMSDVYILLGDG-NFENGWYSRILFMPFISWFWLGGIFL 604 L+ D+Y+ LG+ + W R+ + P + W WLG + + Sbjct: 588 GLIHDLYVALGEPLDMPGAWAVRVYYKPGVRWIWLGALVM 627
ref|ZP_01616632.1| cytochrome c-type biogenesis protein CcmF [marine gamma proteobacterium HTCC2143] gb|EAW31380.1| cytochrome c-type biogenesis protein CcmF [marine gamma proteobacterium HTCC2143] (659 aa) Score: 192 bits (488), Expect: 3.94694e-46 Length: 592, Idn/Pos/Gap = 159/261/73 (26%/44%/12%) Query: 63 ILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLT 122 + L DF+++ V S+ P +YKL +W N+EGSL L + L + + F +L Sbjct: 60 VFLKDDFTVVIVAAHSNSQLPWIYKLSAVWGNHEGSLLL-WGLILSAWSLAVAMFSRQLP 118 Query: 123 L-----IVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 L ++ + +V F+LF+ LL FD EG++LN LLQD + Sbjct: 119 LDMLARVLSVMGMISVGFLLFS--------LLTSNPFDRHLPDFPAEGSDLNPLLQDFGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKC--KFYVLYILRFLNLIGWFIASFSILLGSRW 235 +IHPP++Y Y +S+ F+ + L + + + N I W + I LGS W Sbjct: 171 IIHPPMLYFGYVGFSVAFAFAIAALSSGRLDAAWAKWSRPWTN-IAWAFLTAGIALGSWW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L + + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALVHSLAVTEKRGVFKSWTVLLAIFAFSLSLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNF 355 G LVRSG+L SVH+F P + F L F+ ++I L Y +HY Sbjct: 290 GTFLVRSGVLTSVHSFATDPERGL----FILGFLILVIGSSLTLYALRAPTVSSKSHYRL 345 Query: 356 VYYIFLLV------ILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTL 409 + LL+ ++ L +LF FP L+ +FN + + + IL+ Sbjct: 346 LSREMLLLANNVIFLVSMLTVLFGTLFPLLMDGLGYGKYSVGPPYFNAVFVPLMAILMVF 405 Query: 410 IIIFLINSW----------KLIFIFLGIIIIGGIRGFPEIFLALYFFIYL--------LL 451 + I W KL+ + +++G I FP ++ + Y ++ Sbjct: 406 MGIGPAAHWKKTRIGDLRSKLLVAAVASVLVGII--FPLLYDSEYSIAAALAVCFAAWVI 463 Query: 452 FTLILIIKQK------------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFS 493 T ++ +K+K + + H F +L + L T Y E L Sbjct: 464 LTTLVDVKEKLRNASTISHGLRRLSRAYYGMVFAHIGFAVCVLGVCLTTQYSAERDLRME 523 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 G + L + F+ + NY G I+ F + +I L +KR Y Sbjct: 524 PGDQMELA-GYSFQFQGTQPVIGPNYSGEEGT--ISVFED----GSIIATLHPQKRRYNA 576 Query: 554 Q-SLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 Q T++ I D+Y+ LG+ E+ W R+ + PF+ W WLG + + Sbjct: 577 QRGQTMTEAAIDNGFFRDLYVALGEPLGESAWAVRVHYKPFVRWIWLGALLM 628
ref|ZP_05042162.1| cytochrome c-type biogenesis protein CcmF [Alcanivorax sp. DG881] gb|EDX89583.1| cytochrome c-type biogenesis protein CcmF [Alcanivorax sp. DG881] (656 aa) Score: 192 bits (488), Expect: 4.08089e-46 Length: 586, Idn/Pos/Gap = 159/271/68 (27%/46%/11%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL-GYFLQFIIYFTFINYFINKLTLI 124 ++DFS+ +V S+ P Y+L +W +EGSL L G+ L + + L+ Sbjct: 63 INDFSVAYVAGHSNSALPLEYRLSAIWGGHEGSLLLWGWML------SGWAAMVGLLSRS 116 Query: 125 VKLTFFYNVYFILFNISF-LSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPL 183 V L V ++ IS L +LL FD + L+G +LN LLQD ++IHPP+ Sbjct: 117 VPLPMVARVLAVMGMISVGFMLFMLLTSNPFDRNLPWFPLDGADLNPLLQDPGLIIHPPM 176 Query: 184 IYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ F+ + L++ + + R + W + I LGS WAY ELG Sbjct: 177 LYMGYVGFSVAFAFAVAGLLMGNLDPAWARWA-RPWTTVAWSFLTVGIALGSWWAYYELG 235 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE SL+PWL AL+HSL ++ K + R ++ L + + + ++G LVR Sbjct: 236 WGGWWFWDPVENASLMPWLAGTALIHSLAVSEKRNMFRAWTVLLAIITFSLSLLGTFLVR 295 Query: 302 SGLLQSVHTFVNSP-------NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYN 354 SG+L SVH F N P FLI+ L+ +F L L+ T F + + Sbjct: 296 SGVLTSVHAFANDPARGAFILGFLIVVAGGALI-LFGLRASALRSNTGFKPV----SREA 350 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 F+ L+++ +L FP + + D + +FN + +L+ L++ + Sbjct: 351 FLLGNNLILLTATSVVLMGTLFPLIGEAL-DMKISIRSPYFNGFFVPLAFVLILLMVPGM 409 Query: 415 INSWK----------LIFIFLGIIIIG--GIRGFPEI-----FLALYFFIYLLLFTLILI 457 ++WK + + II G G R PE LA+ ++L+ + + Sbjct: 410 FSNWKRQDGNTLLKRMALLAPAAIIAGWFGSR-LPEPSPWQGVLAIMLALFLVFAHVDDV 468 Query: 458 IKQKFSF------------------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLL 499 +++ ++ ++ H ++ + L++ + E + + G T Sbjct: 469 VRRARAYKQGFVSGLGKLGRGYWGMVLAHCGLAVLIAGITLVSFHEVERDIRMAPGDTAK 528 Query: 500 LNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 L D + +F L+ N+ ST G+F ++ +P+ V+ EKR Y + T Sbjct: 529 LGD-YTFVFDSLDEYRGPNFDSTRGHFHVSHDGDPVA------VMHPEKRTYHASRQVMT 581 Query: 560 KSIIYTNLMSDVYILLGDG-NFENGWYSRILFMPFISWFWLGGIFL 604 ++ I D+Y+ LG+ + N W RI F P I W WLG + + Sbjct: 582 EAAIDAGFWRDLYVALGEPLDKSNAWAVRIYFKPGIRWIWLGALIM 627
ref|ZP_08666614.1| cytochrome c-type biogenesis protein CcmF [Paracoccus sp. TRP] (653 aa) Score: 192 bits (488), Expect: 4.7028e-46 Length: 579, Idn/Pos/Gap = 154/250/68 (26%/43%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 SDFS+ V E S +P +YK+ +W N+EGS+ L + L ++ + F L K Sbjct: 64 SDFSVALVYENSHTAKPMIYKISGVWGNHEGSMLL-WVLILSLFGAAVATF--DANLPPK 120 Query: 127 LTFFYNVYFILFNISFLSLTLLL--IFLRF-DFFFNFTVLEGNELNFLLQDINILIHPPL 183 L +SFL+ L FLR FN G +LN LLQD + HPP Sbjct: 121 LRARVLAVQAAIGMSFLAFILFTSNPFLRMASPPFN-----GRDLNPLLQDPGLAFHPPF 175 Query: 184 IYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y S+ FS + LI + + + +R L W + I LGS WAY ELG Sbjct: 176 LYLGYVGLSMAFSFAVAALI-EGRVDAAWARWVRPWTLAAWIFLTIGIGLGSWWAYYELG 234 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGGFWFWD VE S +PWL++ ALLHS ++ K +++ ++ L + + +IG +VR Sbjct: 235 WGGFWFWDPVENASFMPWLIAAALLHSAIVVEKREVLKSWTILLAIMAFGFSLIGTFIVR 294 Query: 302 SGLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 SG++ SVH+F + P F+++ L FL L + ++ V Sbjct: 295 SGVITSVHSFASDPERGVFILLILGVFLGGALTLFTFRAPAMQARGAFAPVSREGALVLN 354 Query: 359 IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSW 418 LL + F+ + ++ P + + D L FF + F+ L ++ + I W Sbjct: 355 NILLAVSAFVVFVGTMW-PLVAEMLWDRKLSVGAPFFEQAFTPFMVALAIILPLGAILPW 413 Query: 419 K------LIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILII-------------- 458 K +++ G +++ G +AL F + L +I Sbjct: 414 KRGRLARVLYPLRGALVLTG------AVMALIFAVSTGRSALAVIGGGLGVWLVGGAVAD 467 Query: 459 -----------------KQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN 501 + + V H + + L+ + E I IG+T ++ Sbjct: 468 LWLRTGSSGFARLRRLPRADWGKAVAHAGLGVTFIGISLLMAWQVEDIRVAHIGETFRVS 527 Query: 502 DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKS 561 + I +++ NY +T +T + VL+ EKR Y Q++ T++ Sbjct: 528 -AYDITLTEVDERPGPNYQATVATMKVTRDGRQVA------VLYPEKRIYPVQAMPTTEA 580 Query: 562 IIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLG 600 I + D+Y+++GD + GW R PF SW WLG Sbjct: 581 AIQNGMFRDLYLVIGDTQPDGGWAVRTYIKPFASWIWLG 619
ref|YP_006820174.1| cytochrome c-type biogenesis protein CcmF [Alcanivorax dieselolei B5] gb|AFT69831.1| Cytochrome c-type biogenesis protein CcmF [Alcanivorax dieselolei B5] (651 aa) Score: 192 bits (487), Expect: 5.4649e-46 Length: 582, Idn/Pos/Gap = 150/263/61 (25%/45%/10%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL-GYFLQFIIYFTFINYFINKLTLI 124 ++DFSI +V S+ P Y+L +W +EGSL L G+ L + L+ Sbjct: 63 INDFSITYVANHSNSELPLGYRLSAIWGGHEGSLLLWGWML------AGWTALVGLLSRS 116 Query: 125 VKLTFFYNVYFIL--FNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPP 182 V L V ++ + FL+ +L FD + V++G +LN LLQD +++HPP Sbjct: 117 VPLPMVVRVLSVMGMIAVGFLAF-MLFTSNPFDRALPWFVIDGADLNPLLQDPGLIVHPP 175 Query: 183 LIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 ++Y+ Y +++ F + L+ + + R + W + I LGS WAY EL Sbjct: 176 MLYMGYVGFAVAFGFAVAGLLEGNLDPAWARWA-RPWTTVAWCFLTVGIALGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE SL+PWL AL+HSL ++ K + R ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENASLMPWLAGTALIHSLAVSEKRNLFRAWTVLLAIITFSLSLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSI--FDLNNHYNFVYY 358 RSG+L SVH F N P+ L F +V + + + + F + +F+ Sbjct: 295 RSGVLTSVHAFANDPSRGAFILAFLVVVAGGALTLFALRAGRLSGQGGFKAMSRESFLLG 354 Query: 359 IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSW 418 L+++ +L FP L + + + S +FN + +L+ L++ ++++W Sbjct: 355 NNLVLLAATFVVLMGTLFPLLGEAMDIKVSIRSP-YFNAFFVPLTLLLILLMVPGMMSNW 413 Query: 419 K------------------LIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILIIKQ 460 K LI +LG + G +P LAL ++L+ L ++++ Sbjct: 414 KRQAGKPLVRRLLWLAPAALIGGWLGARLPGATP-WPGT-LALILALFLVFAHLDDVVRR 471 Query: 461 KFSF------------------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 ++ +V H ++ + +++ + E + G + Sbjct: 472 ALAYNQGLFAGLRKLTRSYIGMVVAHCGLAVLVAGVTVVSFHETERDVRMRPGDVAEVG- 530 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + F L+ NY S G+FL++ P+ N EKR Y + T++ Sbjct: 531 GYRFEFESLSDPVGPNYQSQKGHFLVSRDGRPVTEMN------PEKRTYRASGQVMTEAA 584 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 I LM D+Y+ LG+ ++ W RI P + W WLG + + Sbjct: 585 IDGRLMRDLYVALGEPLGDDAWAVRIYHKPMVRWIWLGALVM 626
ref|YP_003073367.1| cytochrome C biogenesis protein CcmF [Teredinibacter turnerae T7901] gb|ACR14605.1| cytochrome c-type biogenesis protein CcmF [Teredinibacter turnerae T7901] (677 aa) Score: 192 bits (487), Expect: 5.94044e-46 Length: 585, Idn/Pos/Gap = 162/267/68 (27%/45%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTL--- 123 DFS+ +V S++ P YKL +W +EGSL L F+ + ++ F +L + Sbjct: 64 DDFSVAYVARQSNLVLPVQYKLSAVWGGHEGSLLLWVFI-LASWTLAVSVFSRRLPIDVL 122 Query: 124 --IVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + V F+LF I+ + F+ +G++LN LLQD ++IHP Sbjct: 123 ARVLSVMGMIAVGFLLFTIATSNP--------FERILPNIPSDGSDLNPLLQDPGLIIHP 174 Query: 182 PLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTE 239 P++Y+ Y +S++F+ + L+ + + R W S I LGS WAY E Sbjct: 175 PMLYMGYVGFSVVFAFAIAALL-SGRMDAAWARWSRPWTNAAWCFLSLGIALGSWWAYYE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE SLLPWL+ AL+HSL + K + + +L L + + + ++G L Sbjct: 234 LGWGGWWFWDPVENASLLPWLVGTALIHSLAMTEKRGVYKNWTLLLAIFSFSLSLLGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFV-YY 358 VRSG++ SVH F + P + F L F+ I++ L + + + ++F+ Sbjct: 294 VRSGVITSVHAFASDPTRGV----FILAFLGIVVGGSLTLFAVRAQVVKSISGFDFLSRE 349 Query: 359 IFLLV--ILYFLYLLFVL---YFPFLIKCYNDNALLFSFGFFN----KIL-----LLFIG 404 FLL IL+F+ LFVL +P + N + +FN K++ LL IG Sbjct: 350 AFLLANTILFFIAALFVLLGTVYPIISDALNLGKISVGEPWFNFFFVKLMAVVAALLGIG 409 Query: 405 ILLTLIII--FLINSWKLIFI----FLGIIIIGGIRGFPEIFLALYFFI-YLLLFTLILI 457 I+L I W+ + I +LG I G I G I A+ + ++F + Sbjct: 410 IMLNWKKTDYGKIRPWQTVPIIGALWLGSFIPGVIEGDYSIAAAISITLGSWVIFASLAD 469 Query: 458 IKQK------------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLL 499 +K+K + ++ H F F ++ L TIY ++ + +IG ++ Sbjct: 470 LKRKIRHAPRFTAGLSKLSPSYYGMLIAHIGFAFSLMGASLNTIYSDQRDVRIAIGDSVF 529 Query: 500 LNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 + D+ + NY + G ++ + L EKR Y + T Sbjct: 530 AA-GYEYELLDVTRVKGANYFADVGEIIVRKHGKEVSR------LRPEKRRYFSGGNVMT 582 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 ++ I D+Y+ LG+ W RI F P + W WLG I + Sbjct: 583 EADIDAGFTRDIYVALGEQLDNTDWAIRIHFKPVVRWIWLGAILM 627
ref|ZP_10869201.1| hypothetical protein IMCC14465_04350 [alpha proteobacterium IMCC14465] gb|EJW22041.1| hypothetical protein IMCC14465_04350 [alpha proteobacterium IMCC14465] (656 aa) Score: 192 bits (487), Expect: 6.40371e-46 Length: 604, Idn/Pos/Gap = 156/265/78 (25%/43%/12%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 SDFS+ V S ++P +Y+L +W N+EGS+ L + L Y I F + +K Sbjct: 64 SDFSLWLVTANSHADKPFIYRLTGVWGNHEGSMLL-WILMLAAYGAGIAQFGKSMPAALK 122 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFFFN--FTVL-----EGNELNFLLQDINILI 179 V I+ ++FL F F + F+ L EG+ LN +LQD + + Sbjct: 123 ARVL-GVQGIIG----------VLFLAFSLFTSNPFSRLISPPFEGSGLNPILQDPALAV 171 Query: 180 HPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 HPPL+Y Y +S+ FS S L+ K +R L+ W + I +GS WAY Sbjct: 172 HPPLLYAGYVGFSLAFSFSVAALMSGKISPDWAKWVRPWTLLAWLSLTLGIAVGSFWAYY 231 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGGFWFWD VE S +PWL ALLHS L+ + + ++ L + + + I G Sbjct: 232 ELGWGGFWFWDPVENASFMPWLAGTALLHSALVTARRNTLHSWTMLLAILTFALCIAGTF 291 Query: 299 LVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 LVRSG+L SVH F P + L V + +++ + +S D N ++ V Sbjct: 292 LVRSGVLTSVHAFATDPTRGVFILMVLGVLVGGALLLFAMRAAGLSSA-DKNVPFHPVSR 350 Query: 359 --------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLI 410 +FL ++L + +P +I + + ++N + + I LL L+ Sbjct: 351 EGALILNNVFLASATATVFLGTI--YPLVIDAFGLGKISVGAPYYNAVFVPLITPLLLLM 408 Query: 411 IIFLINSW---------KLIFIFLGIIIIGGI---------RGFPEIFLALYFFIYL--- 449 I +++W K + + I+GG+ +G + + L ++ L Sbjct: 409 PIGPLSNWGRSDVSPVIKKLAAAGVLAILGGLTVLVMTSEHQGGAALGVGLSMWLMLGAL 468 Query: 450 ----------------LLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFS 493 L LI + Q++ I+ H ++L ++ T + E + + Sbjct: 469 VDLSKKIRFDTTPLAQLPKKLIKLPLQQWGSILAHGGLGVMILGIIGTTAWRSEVVQAVT 528 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 G + ++ + + F + NY + G F I + L EKRFY Sbjct: 529 PGAEMDIS-GYAVTFEGETSVAGENYTAEQGVFSIKRGGQKIAE------LKPEKRFYTV 581 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRIL---FMPFISWFWLGGIFLLDSIIF 610 + T++ I NL +YI++ D +G SR++ + P +++ W+GG+ + + Sbjct: 582 ERQSTTEAAILKNLAGHLYIVIADETVSDGVVSRVVRIWYHPLVAFIWIGGLIMALGGVA 641 Query: 611 SLFR 614 +L R Sbjct: 642 ALTR 645
ref|ZP_09227915.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20311] dbj|GAA64164.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20311] (653 aa) Score: 191 bits (486), Expect: 7.01926e-46 Length: 581, Idn/Pos/Gap = 155/260/56 (26%/44%/9%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L DF++ +V SS P YK+ + W +EG++ L + L + + L + Sbjct: 62 LTDDFTVSYVAYHSSSTLPWYYKITSTWGGHEGAILL-WLLMQAGWTALVAVRSKSLPWV 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 ++ + F+ + F+ TLLL F+ + +EG +LN LLQD ++IHPPL+ Sbjct: 121 LRARVLGVLGFL--GVGFMMYTLLLSS-PFERLLPYFPVEGRDLNPLLQDPGMIIHPPLL 177 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y+ Y S+ FS + L+ K R + W + I +GS WAY ELGWG Sbjct: 178 YMGYVGLSVAFSFAIAALLTGKLDNTWAKWSRPWTMTAWGFLTLGITIGSWWAYAELGWG 237 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE SL+PWL++ ALLHSL + K + + ++ L +A + + ++G +VRSG Sbjct: 238 GWWFWDPVENASLMPWLVATALLHSLSVTEKRGVFKSWTVLLAIAAFSLSLLGTFIVRSG 297 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL- 362 ++ SVH F P+ + F L F+ I++ L Y S Y FV L Sbjct: 298 IIVSVHAFATDPDRGL----FILAFLAIVVGGGLALYGLRVSQVKSEGRYKFVSREVALW 353 Query: 363 -----VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILL-------------- 400 +++ L +L P + K ++ FFNK ILL Sbjct: 354 LNNIFLVVATLIVLLGTLLPMVHKEMGLGSISIGEPFFNKMFAILLVPFAILMGIGPFLR 413 Query: 401 ------------LFIGILLTLII--IFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFF 446 +F+G L +++I +L +S++++ + G+ F F+ LY Sbjct: 414 WKQNKWAFLQNKIFVGALASVVITCAWLFSSYEVVTPLTLLATTLGVWIFIATFIDLYTK 473 Query: 447 IYLLLFTLILIIKQKFSF---IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDN 503 + + I + S+ ++ H F++ + L + Y E + G ++ LN Sbjct: 474 AAVHGSLKVGIKRLGLSYWAMVLGHVGLAFVIAGITLTSAYSVERDVAMKPGDSVQLN-Q 532 Query: 504 FIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSII 563 + F + I NY G + ++ + L++EKR Y T++ I Sbjct: 533 YQYRFEGVKTIRGANYSGHAGVVTVLKENDTVTR------LYAEKRRYDIGMQFMTEAAI 586 Query: 564 YTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 D+Y+ LG+ E W RI PF+ W W+GG+ + Sbjct: 587 DAGFTRDLYLALGEQLSEGAWSLRIYHKPFVRWMWIGGVLI 627
ref|ZP_10295522.1| cytochrome C biogenesis protein ccmF [Pseudoalteromonas rubra ATCC 29570] (651 aa) Score: 191 bits (486), Expect: 7.50379e-46 Length: 590, Idn/Pos/Gap = 159/262/70 (26%/44%/11%) Query: 63 ILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLT 122 I L DF++ +V SS P YK+ + W +EG++ L +Q + + L Sbjct: 60 ITLTDDFTVAYVAHHSSSTLPWYYKVTSTWGGHEGAILLWLVMQ-ASWTALVAMMSKSLP 118 Query: 123 LIVKLTF-----FYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 +++ F V F+L+ + S F+ + +EG +LN LLQD + Sbjct: 119 WVLRARVLGVLGFLGVGFMLYTLWMSS--------PFERLLPYYPVEGRDLNPLLQDPGM 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWA 236 +IHPPL+Y+ Y S+ FS + L+ K R + W + I +GS WA Sbjct: 171 IIHPPLLYMGYVGLSVSFSFAIAALLTGKLDNTWAKWSRPWTMAAWGFLTLGITIGSWWA 230 Query: 237 YTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIG 296 Y ELGWGG+WFWD VE SL+PWL++ ALLHSL + K + + ++ L +A + + ++G Sbjct: 231 YAELGWGGWWFWDPVENASLMPWLVATALLHSLAITEKRGLFKSWTVLLAIAAFSLCLLG 290 Query: 297 IILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFV 356 +VRSG++ SVH F P+ + F L F+ +++ L Y S Y V Sbjct: 291 TFIVRSGIIVSVHAFATDPDRGL----FILSFLALVVGGSLALYGLRVSQVYSEGRYKLV 346 Query: 357 YY--------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILLLFIGI 405 IFL+V L +L P + K ++ FFN+ IL++ I Sbjct: 347 SREVGLWVNNIFLVVAT--LIVLLGTLLPMIHKELGLGSISIGVPFFNQMFAILIVPFAI 404 Query: 406 LLTLIIIFLINSWKL-------IFIFLGIIIIGGI---RGFPEI----FLALYFFIYLLL 451 L+ + + KL + I + I+I F EI +LA +++ + Sbjct: 405 LMGMAPMLRWKQNKLPPLAKKWVGILVATIVITSAWLFSSFDEISTLTYLATALAVWICI 464 Query: 452 FTLILIIKQK-----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSI 494 T++ ++++ ++ ++ H F++ S+ L + Y E + Sbjct: 465 ATVVDLVEKVSVHPSTAQGLKRLGMSYWAMVLGHVGIAFVIASVTLTSAYSVERSVVMKK 524 Query: 495 GKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQ 554 G+ LND + F +N I NY G +T F + +L +EKR Y Sbjct: 525 GEIATLND-YEYRFEGVNEIRGPNYGGHAGE--VTVFKD----GEYVTLLHAEKRLYDVG 577 Query: 555 SLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I D+Y+ LG+ W RI P++ W WLGGI + Sbjct: 578 MQFMTEAAIDDGFFRDLYLALGESMGNGAWSLRIYHKPYVRWMWLGGILI 627
ref|ZP_09708717.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas sp. S9] (657 aa) Score: 191 bits (485), Expect: 9.80026e-46 Length: 584, Idn/Pos/Gap = 144/256/64 (24%/43%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFINYFI 118 ++ DFS+ +V S+ P YK +W +EGSL L G+ I+ + + Sbjct: 62 MVDDFSVRYVASNSNSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSIFSRQLPEEM 121 Query: 119 NKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINIL 178 L ++ + +V F+LF L++ F +G +LN LLQD ++ Sbjct: 122 --LARVLAVMGIISVGFLLF--------LIITSNPFARLLPNMPADGRDLNPLLQDFGLI 171 Query: 179 IHPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWA 236 IHPP++Y+ Y +S+ FS + L+ K + R ++ W I LGS WA Sbjct: 172 IHPPMLYMGYVGFSVAFSFAIAALL-GGKLDAAWARWSRPWTIVAWAFLGIGIALGSWWA 230 Query: 237 YTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIG 296 Y ELGWGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L +A + + ++G Sbjct: 231 YYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLG 290 Query: 297 IILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSI--FDLNNHYN 354 LVRSG+L SVH F + P + L F L+ + + + + S F L + Sbjct: 291 TFLVRSGVLTSVHAFASDPERGVFILAFLLLVVGGSLALFAVRAPVVKSQVGFALWSRET 350 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 + L++++ +L +P ++ L +FN + + +G+L+ +I + + Sbjct: 351 LLLVNNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFNALFVPLMGLLMLVIAVGV 410 Query: 415 INSWK----------LIFIFLGIIIIGGIRGFP------EIFLALYFFIYLLLFTLILI- 457 + WK L+ + LG + +G I F + +++L + I Sbjct: 411 LVRWKSTPVKWLVSMLMPVLLGSVAVGAIAAFAFGDFNWGVMAVCMLAAWVVLAGVRDIF 470 Query: 458 ---------------IKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + + + HF L ++L ++ E + + G + + Sbjct: 471 DKTRNKGLFKGMRELTRSYWGMQLAHFGMAVCALGVVLTSVGNLERDMRMAPGDQVQVG- 529 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQN--VLFSEKRFYLYQSLINTK 560 + +F H N+ + G + E+ Q VL EKRFY Q + T+ Sbjct: 530 AYQFVFEGSKHREGPNFSADRGTMRV--------LEDGQQIAVLHPEKRFYKVQQSMMTE 581 Query: 561 SIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + I D+++ LG+ + W R+ PF+ W WLG + + Sbjct: 582 AAIDAGFTRDLFVALGEPLEDGAWAVRVHIKPFVRWIWLGALLM 625
ref|ZP_01545158.1| cytochrome c-type biogenesis protein CcmF [Stappia aggregata IAM 12614] gb|EAV46001.1| cytochrome c-type biogenesis protein CcmF [Stappia aggregata IAM 12614] (661 aa) Score: 191 bits (485), Expect: 9.88237e-46 Length: 598, Idn/Pos/Gap = 163/252/76 (27%/42%/12%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL----- 121 SDFS+L VVE S +P LYK +W N+EGS+ L + L + + + F L Sbjct: 64 SDFSVLNVVENSHSAKPLLYKFTGVWGNHEGSMLL-WVLILVFFGALVGVFGGNLPADLR 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 + + + + + FILF LL F N LEG +LN +LQDI + IHP Sbjct: 123 AVTLSVQAWVSAGFILF--------LLATSNPFTRIVN-PPLEGADLNPILQDIGLAIHP 173 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +SI FS + LI+ + +R L+ W + I +GS WAY EL Sbjct: 174 PLLYVGYVGFSITFSFAVAALILGRIDAAWARWVRPWTLLAWCFLTLGIAMGSYWAYYEL 233 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL ALLHS ++ K +++ ++ L + + + ++G LV Sbjct: 234 GWGGWWFWDPVENASFMPWLAGTALLHSAIVMEKREALKVWTVLLAIFTFSLSLLGTFLV 293 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFDLNNHYN 354 RSG+L SVH F P + L +FI + +LK+ F I + Sbjct: 294 RSGVLTSVHAFATDPARGVFILGLLCIFIGGSLSLYAWRAPMLKQGGLFAPI---SREGG 350 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 V L + LY P ++ + FFN + LL + Sbjct: 351 LVLNNLFLTAACAAVFVGTLY-PLVLDAVTGEKISVGAPFFNLTFGPLMVPLLLAVPFGP 409 Query: 415 INSWKL--------------------------------IFIFLGI-----IIIGGIRGFP 437 + SWK + LG+ ++ G I Sbjct: 410 VLSWKRADLGAACQRLYAAFGLALLLTLVTYWAWGMDKVLAPLGVGLAVWVMAGAIS--- 466 Query: 438 EIFLALYFFI---YLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSI 494 EI + FF L+ + + + HF +L ++ + + EE +L Sbjct: 467 EIVTRVKFFEIGFKRGFARLVGLPGSAWGAAIAHFGIGLTVLGIVTASAFQEERVLTMRP 526 Query: 495 GKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQ 554 G T+ L + + F NY G+F I + E L KR Y + Sbjct: 527 GDTVELA-GYQMTFEGAAPRRGPNYTEEVGHFSIRQ-GGALVAE-----LDPSKRIYTAR 579 Query: 555 SLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 + T++ IYT S VY+ LG+G + R+ F P I+ W+G + + +FS+ Sbjct: 580 QMPTTEAGIYTTGFSQVYLSLGEGRGDGAVDVRVYFKPLITLIWIGCVIMSLGAVFSI 637
ref|YP_003444132.1| cytochrome c-type biogenesis protein CcmF [Allochromatium vinosum DSM 180] gb|ADC63100.1| cytochrome c-type biogenesis protein CcmF [Allochromatium vinosum DSM 180] (661 aa) Score: 191 bits (485), Expect: 1.05645e-45 Length: 599, Idn/Pos/Gap = 163/267/83 (27%/44%/13%) Query: 62 IILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL 121 I L DFS+L+V S+ P+LYK+ +W +EGSL L + L + + F L Sbjct: 59 IAFLDDDFSVLYVASNSNTLMPTLYKISAIWGAHEGSLLL-WILMLAGWGAAVAQFSRNL 117 Query: 122 TL-----IVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDIN 176 L ++ + + F+LF LL FD F LEG +LN LLQD Sbjct: 118 PLPMIARVISVQAMIAIGFMLFT--------LLTSNPFDRIFP-APLEGRDLNPLLQDPG 168 Query: 177 ILIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSR 234 + IHPP++Y+ Y +S+ F+ +I K + R + W + I LGS Sbjct: 169 LAIHPPMLYMGYVGFSVAFAF-AIAALIGGKLDAAWARWSRPWTTVAWVFLTIGIALGSW 227 Query: 235 WAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVII 294 WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + K + ++ L ++ + + + Sbjct: 228 WAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEKRAAFKNWTVLLAISTFSLSL 287 Query: 295 IGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSI------FD 348 +G LVRSG+L SVH F P F L+F+ ++I L Y + FD Sbjct: 288 LGTFLVRSGVLTSVHAFATDPT----RGSFILLFLCVVIGGSLALYAWRAPTISGGGRFD 343 Query: 349 LNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLT 408 L + F+ LL+ + +LF P + + + F +FNK +F+ + Sbjct: 344 LLSRETFLLINNLLLTTLAVLVLFGTLAPLIYEAAGWGKISVGFPWFNK---MFVALSPL 400 Query: 409 LIIIFLIN---------SWKL-----IFIFLGI--IIIGGIRGFPEIFLALYFFIYLL-- 450 LI+ I +W+L I + LGI ++ + G +A F + + Sbjct: 401 LILATAIGPHVHWKHDEAWRLVRALWIALALGIAAVLTVSLPGMSADQMATGFGVGMAVW 460 Query: 451 -----LFTLILIIKQK-----------------FSFIVYHFNFFFIMLSLLLITIYGEEF 488 L +L +K K + + H ++ + +++I+GEE Sbjct: 461 LAASHLVSLFDRLKHKGGLRGLKADLTGNSRGYYGMWLAHMGLAVFIVGVTMVSIHGEET 520 Query: 489 ILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFS 546 + S G + + + F + I NY + G+F++ Y + + L+ Sbjct: 521 DVRMSPGASHEAS-GYRFQFNGVTAIPGPNYQAFRGDFVV--------YRGEREIARLYP 571 Query: 547 EKRFYLYQSLINTKSIIYTNLMSDVYILLGDG-NFENGWYSRILFMPFISWFWLGGIFL 604 EKR Y+ + T++ I + D+YI LG+ + W R+ P++ W WLG I + Sbjct: 572 EKRKYVSGGMPMTEAAIDAGFLRDIYISLGEPVGVQGDWALRLYHKPYVRWIWLGCILM 630
ref|ZP_10285747.1| cytochrome C biogenesis protein ccmF [Pseudoalteromonas marina mano4] (656 aa) Score: 191 bits (484), Expect: 1.18736e-45 Length: 582, Idn/Pos/Gap = 158/263/58 (27%/45%/9%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L DF++ +V SS P YK+ + W +EG++ L +Q + + L + Sbjct: 62 LTDDFTVSYVAYHSSSTLPWYYKITSTWGGHEGAILLWLVMQ-AGWTAVVAARSKSLPWV 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 ++ + F+ + F+ TLLL F+ + +EG +LN LLQD ++IHPPL+ Sbjct: 121 LRARVLGVLGFL--GVGFMMYTLLLSS-PFERLLPYFPVEGRDLNPLLQDPGMIIHPPLL 177 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y+ Y S+ FS + L+ K R + W S I +GS WAY ELGWG Sbjct: 178 YMGYVGLSVAFSFAIAALLTGKLDNTWAKWSRPWTMTAWGFLSLGITIGSWWAYAELGWG 237 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE SL+PWL++ ALLHSL + K I + ++ L +A + + ++G +VRSG Sbjct: 238 GWWFWDPVENASLMPWLVATALLHSLSVTEKRGIFKSWTVLLAIAAFSLSLLGTFIVRSG 297 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL- 362 ++ SVH F P+ + F L F+ I++ L Y S Y FV L Sbjct: 298 IIVSVHAFATDPDRGL----FILAFLGIVVGGGLALYALRVSQVHSEGRYKFVSREVALW 353 Query: 363 -----VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILLLFIGILLTLI--II 412 +++ L +L P + K ++ FFNK ILL+ IL+ + + Sbjct: 354 LNNIFLVVATLIVLLGTLLPMVHKEMGLGSISIGEPFFNKMFAILLVPFAILMGIGPFLR 413 Query: 413 FLINSW-----KLIFIFLGIIIIGGI---RGFPEIFLALYFF----IYLLLFTLILIIKQ 460 + N W K++ L + I + + E+ +++ + TLI I + Sbjct: 414 WKQNKWAFLQNKIVVGILASVAITCVWLFSAYDEVTPLTLLATTLGVWVAVSTLIDIYTK 473 Query: 461 K-----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND- 502 ++ ++ H F++ + L + Y E ++ G + LN Sbjct: 474 AAVHGTLKEGLKRLGVSYWAMVLGHIGMAFVIAGVALTSAYSVERDVSMKKGDIVQLNQY 533 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 N+ F + I NY G ++T N +++ L++EKR Y T++ Sbjct: 534 NY--RFEGVKTIRGPNYSGHAG--VVTVLKN----DDVVTRLYAEKRKYDIGMQFMTEAA 585 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 I D+Y+ LG+ + W RI PF+ W W+GG+ + Sbjct: 586 IDAGFTRDLYLALGEQLSQGAWSLRIYHKPFVRWLWIGGVLI 627
emb|CBI78945.1| cytochrome C-type biogenesis protein [Bartonella sp. AR 15-3] (654 aa) Score: 191 bits (484), Expect: 1.18736e-45 Length: 586, Idn/Pos/Gap = 174/285/71 (29%/48%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+L VVE S +P LYK++ +W N+EGS+ L + L + T I F +L Sbjct: 62 IVSDFSVLNVVENSHSEKPILYKIVGVWGNHEGSMLL-WVLLLAFFSTLIALFSRQLPEQ 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFF-FNFTVLEGNELNFLLQDINILIHPPL 183 K +I+ +FL L ++F+ F + +L+GN+LN +LQDI++ IHPPL Sbjct: 121 FKALVLGCQSWII--SAFL---LFILFISNPFIRVHPPLLQGNDLNPVLQDISLAIHPPL 175 Query: 184 IYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ FS S LI K + Y +R L+ W + I +GS WAY ELG Sbjct: 176 LYLGYVGFSVCFSFSIAALITGYLNKIWA-YWIRPWVLLAWIFLTVGITVGSYWAYYELG 234 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE +SL+PWL ALLHS+++ K ++R+ +LFL + + + ++G LVR Sbjct: 235 WGGYWFWDPVENVSLMPWLSGTALLHSVIVFEKRNLLRIWTLFLAILTFSLSLMGTFLVR 294 Query: 302 SGLLQSVHTFVNSP---NFLIIFLYFF---LVFIFILIVILLKKYTYFTSIFD-----LN 350 SG+L SVH+F P ++ L+FF + +F + + +LK +F + LN Sbjct: 295 SGILMSVHSFAVDPTRGKAILAILFFFTGGALLLFAIRMPILKTGGFFYPVSREGFIILN 354 Query: 351 N----------------------------HYNFVYYIFLLVILYFLYLLFVLYFPFLIKC 382 N +++ F L + LLFV + P + Sbjct: 355 NLLLITATATVLIGTLYPYFFETLTGQKISVGALFFNFTFGPLMMVLLLFVPFGPMIAWK 414 Query: 383 YNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWKLIFIFLGI-----IIIGGIRGF- 436 + D F F ++ +F + I F ++S + IF LG+ + +GG+ Sbjct: 415 HGD-----FFAVFERLWFVFALACVACFITFYVDSLRDIFAALGVGLAVFVFLGGLADLW 469 Query: 437 -PEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIG 495 + + F + + F + + F + H + ++ + +G+E IL IG Sbjct: 470 SKSGYHKVPFLVRVKRFLGLPL--SVFGAALAHMGLGVTLFGIICVATFGQERILIMQIG 527 Query: 496 KTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 +T+ + I F ++++I +NY + +F I D N I NV+ S KRFY Q+ Sbjct: 528 ETVTIAGK-TIRFDEVHNIAGSNYSAIQFDFKIYDNKN-----MISNVIAS-KRFYSSQN 580 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGG 601 T+ I ++ S YI G N + G I + P++ W G Sbjct: 581 RSTTEVGIKSHGFSQFYIAPGRIN-DQGLVVHIWWKPYVICIWFGA 625
ref|ZP_09238063.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20480] dbj|GAA74312.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20480] (656 aa) Score: 191 bits (484), Expect: 1.27995e-45 Length: 582, Idn/Pos/Gap = 158/263/58 (27%/45%/9%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L DF++ +V SS P YK+ + W +EG++ L +Q + + L + Sbjct: 62 LTDDFTVSYVAYHSSSTLPWYYKITSTWGGHEGAILLWLVMQ-AGWTAVVAARSKSLPWV 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 ++ + F+ + F+ TLLL F+ + +EG +LN LLQD ++IHPPL+ Sbjct: 121 LRARVLGVLGFL--GVGFMMYTLLLSS-PFERLLPYFPVEGRDLNPLLQDPGMIIHPPLL 177 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y+ Y S+ FS + L+ K R + W S I +GS WAY ELGWG Sbjct: 178 YMGYVGLSVAFSFAIAALLTGKLDNTWAKWSRPWTMTAWGFLSLGITIGSWWAYAELGWG 237 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE SL+PWL++ ALLHSL + K I + ++ L +A + + ++G +VRSG Sbjct: 238 GWWFWDPVENASLMPWLVATALLHSLSVTEKRGIFKSWTVLLAIAAFSLSLLGTFIVRSG 297 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL- 362 ++ SVH F P+ + F L F+ I++ L Y S Y FV L Sbjct: 298 IIVSVHAFATDPDRGL----FILAFLGIVVGGGLALYALRVSQVHSEGRYKFVSREVALW 353 Query: 363 -----VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILLLFIGILLTLI--II 412 +++ L +L P + K ++ FFNK ILL+ IL+ + + Sbjct: 354 LNNIFLVVATLIVLLGTLLPMVHKEMGLGSISIGEPFFNKMFAILLVPFAILMGIGPFLR 413 Query: 413 FLINSW-----KLIFIFLGIIIIGGI---RGFPEIFLALYFF----IYLLLFTLILIIKQ 460 + N W K++ L + I + + E+ +++ + TLI I + Sbjct: 414 WKQNKWAFLQNKIVVGILASVAITCVWLFSAYDEVTPLTLLATTLGVWVAVSTLIDIYTK 473 Query: 461 K-----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND- 502 ++ ++ H F++ + L + Y E ++ G + LN Sbjct: 474 AAVHGTLKEGLKRLGVSYWAMVLGHIGMAFVIAGVALTSAYSVERDVSMKQGDIVQLNQY 533 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 N+ F + I NY G ++T N +++ L++EKR Y T++ Sbjct: 534 NY--RFEGVKTIRGPNYSGHAG--VVTVLKN----DDVVTRLYAEKRKYDIGMQFMTEAA 585 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 I D+Y+ LG+ + W RI PF+ W W+GG+ + Sbjct: 586 IDAGFTRDLYLALGEQLSQGAWSLRIYHKPFVRWLWIGGVLI 627
ref|YP_007306624.1| c-type cytochrome biogenesis protein CcmF [Mesorhizobium australicum WSM2073] gb|AGB47248.1| c-type cytochrome biogenesis protein CcmF [Mesorhizobium australicum WSM2073] (661 aa) Score: 191 bits (484), Expect: 1.36831e-45 Length: 591, Idn/Pos/Gap = 154/251/61 (26%/42%/10%) Query: 68 DFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVKL 127 DFS+ V E S QP +YK+ W N+EGS+ L +++ TF + + Sbjct: 64 DFSLANVWENSHSLQPLIYKITGTWGNHEGSMLL-----WVLILTFFGALVAAFGSNLPA 118 Query: 128 TFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLIYIS 187 T NV + I +L+ N +EG +LN +LQD+ + IHPP++Y+ Sbjct: 119 TLRANVLAVQGTIGAAFFLFILVTSNPFIRLNPAPIEGRDLNPILQDLGLAIHPPMLYLG 178 Query: 188 YASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELGWGGF 245 Y +SI FS S LI + + + +R L+ W + I +GS WAY ELGWGGF Sbjct: 179 YVGFSICFSFSVAALI-EGRIDASWARWVRPWTLVAWMFLTGGIAMGSYWAYYELGWGGF 237 Query: 246 WFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSGLL 305 WFWD VE S +PWL ALLHS ++ K +++ +L L + + + ++G LVRSG+L Sbjct: 238 WFWDPVENASFMPWLAGTALLHSAIVMEKRSALKIWTLLLAILTFSLSLLGTFLVRSGVL 297 Query: 306 QSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL 362 SVH F P F++ L F+ L + K T ++ V L Sbjct: 298 TSVHAFATDPTRGVFILCILTLFIGGSLALFALRASKLTAGGLFHPVSREGALVLNNLFL 357 Query: 363 VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLIN---SWK 419 L+ LY P ++ ++ + + FFN L F +++ L+++ +WK Sbjct: 358 TTATATVLVGTLY-PLAVEAFSADKISVGAPFFN---LTFAPLMVPLLVMVPFGPLLAWK 413 Query: 420 LIFIF--------------------------------LGI-----IIIGGIRGFPEIFLA 442 +F LG+ +I+G + Sbjct: 414 RGDVFGVAQRLMAAFAAALLATLVTVLFIDGASVLAALGVGLGVWLILGALTDLATKAGV 473 Query: 443 LYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 ++ L+ + + F H +L ++ +G E IL+ G+T+ ++ Sbjct: 474 GNVAAPTMVRRLVGLPRSVFGTAFAHLGLGLTVLGIVGTLCFGTEKILSMHAGETVEISG 533 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + F L NY G F + E + S KRFY + + T+S Sbjct: 534 R-TVRFVGLYPAQGPNYSEDRGRFELIGVSGSPVGE-----VSSAKRFYRVRQMTTTESG 587 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSLF 613 I T +S +YI LGD + R+ + P ++ W GG+ ++ SL Sbjct: 588 IKTLGLSQLYISLGDEGKDGSVVVRLWWKPLVTLIWGGGLVMMAGAAMSLM 638
ref|ZP_06792650.1| cytochrome c-type biogenesis protein CcmF [Brucella sp. NVSL 07-0026] gb|EFG37565.1| cytochrome c-type biogenesis protein CcmF [Brucella sp. NVSL 07-0026] (663 aa) Score: 190 bits (483), Expect: 1.60337e-45 Length: 594, Idn/Pos/Gap = 164/269/63 (27%/45%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L F+ ++ + F L Sbjct: 62 VVSDFSVLNVVENSHSQKPLLYKITGVWGNHEGSMLLWVFI-LTLFSALVAAFSGNLPET 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTV-LEGNELNFLLQDINILIHPPL 183 ++ +I +FL+ +IF F F +EG +LN +LQDI + IHPPL Sbjct: 121 LRANVLAVQGWI--GTAFLAF---IIFTSNPFTRIFPAPMEGGDLNPVLQDIGLAIHPPL 175 Query: 184 IYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ FS + L+ + + + +R L+ W + I +GS WAY ELG Sbjct: 176 LYLGYVGFSVCFSFAVAALL-EGRLDAAWARWVRPWALMAWMFLTGGIAMGSYWAYYELG 234 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE SL+PWL+ ALLHS ++ K +++ ++ L + + + ++G LVR Sbjct: 235 WGGWWFWDPVENASLMPWLVGTALLHSAIVMEKRSALKIWTVLLAILTFSLSLLGTFLVR 294 Query: 302 SGLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 SG+L SVH+F P F++ L F+ L + ++ + ++ V+ Sbjct: 295 SGVLTSVHSFATDPGRGLFILGILALFIGGSLSLFALRVQSLSAGGIFHPISREGALVFN 354 Query: 359 IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN------KILLLFI---GILLT- 408 L L+ LY P L++ + FFN +LLLF G LL Sbjct: 355 NLFLTTAAATVLIGTLY-PLLLEVTTGEKISVGAPFFNMTFGALMVLLLFAVPFGPLLAW 413 Query: 409 ------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLA------LYFFIYLLLFTLIL 456 + L+ ++ L +GI++ R LA + I+ L L+L Sbjct: 414 KRGDLYGVGQRLMTAFALSLAVVGIML---WRTSAHSVLAALGIGLAAWLIFGSLTDLVL 470 Query: 457 ------------------IIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTL 498 + + F + H +L ++ +T +G E +L G T Sbjct: 471 KAGIGKVSASKAFARFKGLPRSVFGTSLAHIGLGLTLLGIVSVTTFGTENVLVMQPGGTA 530 Query: 499 LLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + N+ + F L I +N+ G F + D V+ KRF+ + + Sbjct: 531 KVQ-NYTLRFEGLRPITGSNFTENRGAFTLLDSSG-----RDLAVIEPSKRFFPARQMPT 584 Query: 559 TKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 T+S I T S VY+ LGD RI + P ++ W G + ++ +FSL Sbjct: 585 TESGIKTLWFSQVYVALGDEPGNGAVVVRIWWKPLVTLIWYGALVMMLGGLFSL 638
ref|ZP_10466963.1| cytochrome c-type biogenesis protein CcmF [Bartonella birtlesii LL-WM9] gb|EJF78307.1| cytochrome c-type biogenesis protein CcmF [Bartonella birtlesii LL-WM9] (659 aa) Score: 190 bits (483), Expect: 1.67167e-45 Length: 604, Idn/Pos/Gap = 179/276/85 (29%/45%/14%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL--- 121 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L + L + T + +F L Sbjct: 62 IVSDFSVLNVVENSHSEKPMLYKITGVWGNHEGSMLL-WVLSLAFFSTLLAFFSQHLPAQ 120 Query: 122 --TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 TLI+ + F+LF I FLS FLR D L+G + N LLQDI + I Sbjct: 121 LKTLILICQSWITSSFLLF-ILFLSNP----FLRLDP----PALQGKDFNPLLQDIALAI 171 Query: 180 HPPLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAY 237 HPPL+Y+ Y +S+ FS S LII +F+ ++ +L L+ W + I++GS WAY Sbjct: 172 HPPLLYLGYVGFSLCFSFSVAALIIGYVDRFWARWVRPWL-LLSWCFLTLGIMVGSYWAY 230 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE +S +PWL ALLHS L+ K ++ +LFL + + + ++GI Sbjct: 231 YELGWGGYWFWDPVENVSFMPWLSGTALLHSTLVLEKREALKSWTLFLAILTFSLSLMGI 290 Query: 298 ILVRSGLLQSVHTFVNSP---NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYN 354 LVRSGLL SVH+F P ++ L+FF +L + + T +F + Sbjct: 291 FLVRSGLLISVHSFAVDPARGQAILALLFFFTGGALLLFAVRVPVLTT-GRLFQPISREG 349 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN------------------ 396 F+ LL+ +L +P+ I+ + FFN Sbjct: 350 FIILNNLLLTTITATVLIGTLYPYFIEALTGQKISVGATFFNLTCGPLMMLLLLLTPFGS 409 Query: 397 --------------KILLLFIGILLTLIIIFLINSWKLIFIFLGI-----IIIGGIRGFP 437 ++ +F + + I F S + IF LGI +++G + Sbjct: 410 MMAWKRGNFLAVFERLWFIFALVCMACFIAFYATSLRDIFTILGIGLSAFVVLGSLADLW 469 Query: 438 EIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSI--- 494 E + + I + F + H + ++ +T + +E ILN I Sbjct: 470 EKSGHHKVTFGVRVKRFIKLPWSVFGAAMAHMGLGVTLFGIVCVTSFVQERILNMHIGDM 529 Query: 495 ----GKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFSEK 548 GKTL L++ RD N+ +FH + YEN V + + K Sbjct: 530 VTIAGKTLHLDE-----VRD----------GVGSNYSAVEFHFTV-YENKNTVGNITASK 573 Query: 549 RFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSI 608 RFY Q+ T+ I + +S +YI+ G + + G I + P+I WLG + Sbjct: 574 RFYSSQNTSTTEVGIQNHGLSQLYIVPGRMD-DRGVVMHIWWKPYIICVWLGASMMAIGG 632 Query: 609 IFSL 612 FSL Sbjct: 633 CFSL 636
ref|ZP_01038073.1| hypothetical protein ROS217_02975 [Roseovarius sp. 217] gb|EAQ23297.1| hypothetical protein ROS217_02975 [Roseovarius sp. 217] (663 aa) Score: 190 bits (483), Expect: 1.81713e-45 Length: 587, Idn/Pos/Gap = 162/261/61 (27%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDF++ VVE S +P L+K+ W ++EGSL L + L +I+ + + Sbjct: 62 VVSDFTVRNVVENSHSLKPMLFKVAGTWGSHEGSLLL-WTLILVIFGAGVALLGRNIPAG 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 +K +I +I FLS +L FD F L+G +LN LLQDI + +HPPL+ Sbjct: 121 LKARTLSVQAWI--SIGFLSF-MLFTSNPFDRVFP-PPLDGTDLNPLLQDIGLAMHPPLL 176 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y Y +SI+FS + LI + +R L W + I LGS WAY ELGWG Sbjct: 177 YFGYVGFSIVFSFAVAALIEGRVDPAWARWVRPWTLTAWISLTAGIALGSWWAYYELGWG 236 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE S +PWLL ALLHS ++ K + ++ L + + + ++G +VRSG Sbjct: 237 GWWFWDPVENASFMPWLLGTALLHSAIVTEKRDTFKSWTILLAILTFSLSLLGTFIVRSG 296 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS--IFDLNNHYNFVYYIFL 361 +L SVH F P + L V I + + + S +F + + L Sbjct: 297 ILTSVHAFAVDPARGVYILGLLGVTIVGSLTLYAWRAPQLGSGGVFRPISREAGLLLNNL 356 Query: 362 LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLIN---SW 418 L+ +LF +P ++ + + +FN FI +L L+II + SW Sbjct: 357 LLATATATVLFGTLYPLFVEAVTEEKISVGPPYFNAT---FIPFMLPLVIIMGVGPFLSW 413 Query: 419 K----------LIFIFLGIIIIGGI-----RGFP-----EIFLALYFFIYLL-------- 450 K L ++F I + GI P I +A + F+ L Sbjct: 414 KRADLPGIWQRLRWVFGVAIGVAGIVWYFQTDGPLLAVVSIGIAAWVFVATLREWAMRIK 473 Query: 451 LFTLIL---------IIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN 501 LF L L + + + H ++L + T + EE +L G T+ + Sbjct: 474 LFDLPLSQSLRRARNLPRAAHGMTLAHLGVAMLVLGFVGSTAWKEERVLFAEPGTTVEIA 533 Query: 502 DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKS 561 F +IF + + NY++ G + + + L E+R Y T+S Sbjct: 534 -GFEVIFDGVEQLRGPNYIAQQGQLRVLKDGSEIAK------LHPERRSYPVAGTSTTES 586 Query: 562 IIYTNLMSDVYILLGDGNFENG---WYSRILFMPFISWFWLGGIFLL 605 I + L+ D+Y+ + + + W RIL+ P ++W W+G L+ Sbjct: 587 AIRSTLVGDLYVTISEPAADTASGEWNLRILYEPLVNWIWIGATMLV 633
ref|YP_033311.1| cytochrome c-type biogenesis protein cyck [Bartonella henselae str. Houston-1] emb|CAF27283.1| cytochrome c-type biogenesis protein cyck [Bartonella henselae str. Houston-1] (661 aa) Score: 190 bits (483), Expect: 1.8788e-45 Length: 599, Idn/Pos/Gap = 173/274/73 (28%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+L VVE S +P LYK+I +W N+EGS+ L + L + T + F L Sbjct: 62 IVSDFSVLNVVENSHSEKPMLYKIIGVWGNHEGSMLL-WVLSLAFFSTLVALFSQHLPEQ 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL--IFLRFDFF-FNFTVLEGNELNFLLQDINILIHP 181 +K IL S+++ LL +F+ F N L+G +LN LLQDI + IHP Sbjct: 121 LK-------ALILVCQSWMTSAFLLFILFMSNPFLRVNPPALQGKDLNPLLQDIALAIHP 173 Query: 182 PLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PL+Y+ Y +S+ FS + LI+ + + ++ +L L+ W + I++GS WAY E Sbjct: 174 PLLYLGYVGFSLCFSFAVAALIMGYVDRLWARWVRPWL-LLAWCFLTLGIMVGSYWAYYE 232 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE +S +PWL ALLHS L K I++ +LFL + + + ++G L Sbjct: 233 LGWGGYWFWDPVENVSFMPWLSGTALLHSALALEKRGILKSWTLFLSILTFSLSLMGTFL 292 Query: 300 VRSGLLQSVHTFVNSPN------FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHY 353 VRSGLL SVH+F P L++F + +F L V L +F I + Sbjct: 293 VRSGLLISVHSFALDPARGRAILALLLFFTGGALSLFALRVPALTPGRFFQPI----SRE 348 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN----------------- 396 F+ LL+ +L +P+ I+ + FFN Sbjct: 349 GFIILNNLLLTTITATVLIGTLYPYFIELLTGQKISVGADFFNLTCGPLMMLLLLLVPFG 408 Query: 397 ---------------KILLLFIGILLTLIIIFLINSWKLIFIFLGI-----IIIGGIRGF 436 ++ ++F + + I F + S + IF LGI + +G + G Sbjct: 409 SMIAWKRGDFLAVFERLWVVFALVAIVCFITFYVVSLRDIFAILGIGLSTFVFLGSLAGL 468 Query: 437 PEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGK 496 + I + F + H + ++ + +G+E IL G Sbjct: 469 WAKSGHRKIALLARFKRFIGLPWSVFGAAIAHMGLGVTLFGIIYVATFGQERILIMHKGD 528 Query: 497 TLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFSEKRFYLYQ 554 + + D + LN + + T N+ +FH + YEN V + + KRFY Q Sbjct: 529 MVTIADKTL----HLNEV----HDETGPNYSAIEFHFTI-YENKNTVGNVTASKRFYPSQ 579 Query: 555 SLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSLF 613 + T+ I + +S +YI+ G + E G I + P+I WLG + + FSLF Sbjct: 580 NTSTTEVGIQNHGLSQLYIVPGRID-ERGLVLHIWWKPYIICVWLGALMMAMGGCFSLF 637
ref|ZP_17685531.1| cytochrome c-type biogenesis protein CcmF [Bartonella washoensis Sb944nv] gb|EJF81560.1| cytochrome c-type biogenesis protein CcmF [Bartonella washoensis Sb944nv] (659 aa) Score: 190 bits (482), Expect: 1.94257e-45 Length: 610, Idn/Pos/Gap = 186/286/97 (30%/46%/15%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL---- 121 +SDFS+L V+E S +P LYK+ +W N+EGS+FL + L ++ T + F L Sbjct: 63 VSDFSVLNVIENSHSEKPMLYKITGVWGNHEGSMFL-WVLSLAVFSTLMALFSQHLPEQF 121 Query: 122 -TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIH 180 L++ F F+LF I F+S FLR N L+GN+LN LLQDI + IH Sbjct: 122 KALVLSCQSFLTSAFLLF-ILFVSNP----FLRV----NPPALQGNDLNPLLQDIALAIH 172 Query: 181 PPLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 PPL+Y+ Y +S+ FS + LI+ + ++ +L L+ W + I++GS WAY Sbjct: 173 PPLLYLGYVGFSLCFSFAIAALIMGHVDGDWARWVRPWL-LLSWCFLTLGIMVGSYWAYY 231 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE +S +PWL ALLHS L+ + ++ +LFL + + + ++G Sbjct: 232 ELGWGGYWFWDPVENVSFMPWLSGTALLHSALVLERRETLKSWTLFLALLTFSLSLMGTF 291 Query: 299 LVRSGLLQSVHTFVNSPN---FLIIFLYFFLV---FIFILIVILLKKYTYFTSIFD---- 348 LVRSGLL SVH+F P ++ L FF +F L V +LK F I Sbjct: 292 LVRSGLLISVHSFAVDPARGWAILALLSFFTGGAFLLFALRVPVLKTGKLFQPISREGFI 351 Query: 349 -LNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN----------- 396 LNN LL + + L+ LY P+LI+ + FFN Sbjct: 352 ILNN--------LLLTTITAIVLIGTLY-PYLIEALTGQKISVGASFFNLTCGPLMVLLL 402 Query: 397 ---------------------KILLLFIGILLTLIIIFLINSWKLIFIFLGIIIIGGIRG 435 ++ +FI + L I F + S + IF+ LG Sbjct: 403 LLVPFGSMMAWKRGDFLAVVERLWFVFILVFLICFITFYVTSLRDIFVVLG--------- 453 Query: 436 FPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSL---------LLITIYGE 486 + LA++ F+ L+ +K +F V F + S+ L IT++G Sbjct: 454 ---VGLAVFVFLSSLVDLWEKSGPRKIAFSVRVKRFLGLPWSVFGAAMAHMGLGITLFGI 510 Query: 487 EFILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYEN---IQNV 543 + NFS + L ++ I+ + + T N+ +F N YEN ++NV Sbjct: 511 VCVANFSQERILTMHIGDIVTIAGRTICFDKVHEGTGPNYSAMEF-NFKIYENENVVRNV 569 Query: 544 LFSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIF 603 S KRFY Q+ T+ I ++ +S +YI+ G + + G I + ++ WLG + Sbjct: 570 TAS-KRFYSSQNTSTTEVGIQSHGLSQLYIVPGRID-DQGLVVHIWWKSYVICIWLGALM 627 Query: 604 LLDSIIFSLF 613 + FSLF Sbjct: 628 MAMGGCFSLF 637
ref|YP_005429251.1| cytochrome c-type biogenesis protein ccmF [Marinobacter hydrocarbonoclasticus ATCC 49840] emb|CCG94828.1| Cytochrome c-type biogenesis protein ccmF [Marinobacter hydrocarbonoclasticus ATCC 49840] (665 aa) Score: 190 bits (482), Expect: 2.0594e-45 Length: 598, Idn/Pos/Gap = 160/260/99 (26%/43%/16%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL--- 121 L+ DFS+ +V S+ P YK +W +EGSL L + L I + + F KL Sbjct: 62 LVDDFSVAYVANNSNSMLPWYYKFSAVWGGHEGSLLL-WILMLIGWTLAVAIFSRKLPSV 120 Query: 122 --TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 + ++ + +V F+LF ++L FD +G +LN LLQDI +++ Sbjct: 121 MVSQVLSVLGMVSVGFLLF--------IILTSNPFDRLLPNVPADGQDLNPLLQDIGLIM 172 Query: 180 HPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAY 237 HPP++Y+ Y +S+ F+ +I + + R + W + I LGS WAY Sbjct: 173 HPPMLYMGYVGFSVAFAF-AIAALINGRLDAAWARWSRPWTTVAWSFLTVGIALGSWWAY 231 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE SLLPWL AL+HSL + K + + ++ L + + + ++G Sbjct: 232 YELGWGGWWFWDPVENASLLPWLSGTALMHSLAVTEKRGVFKSWTVLLAIVTFALSLLGT 291 Query: 298 ILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYN--- 354 LVRSG+L SVH F + P F L + I I+ L Y + + + + Y Sbjct: 292 FLVRSGVLTSVHAFASDPE----RGSFLLALLGITILASLTLYAFRAPVVHVRSRYGSLS 347 Query: 355 ----------FVYYIFLLVILYFLYLLFVLYF---------PFLIKCYND----NALLFS 391 + +LV + LY L + Y PF ++ LL Sbjct: 348 REIFLLLNNVLLVSATMLVAIGTLYPLVLDYLDLGKLSIGEPFFNTTFSPLAVATGLLLG 407 Query: 392 FGFFNKILLLFIG----ILLTLIIIFLINSWKLIFIFLGIIIIGGIRGF-PEIFLALYFF 446 G F++ G LL + + LI S G++I G GF P FL ++ Sbjct: 408 AGIFSRWKKTDGGWLARKLLWPLAVSLIGS-------AGVMI--GYGGFAPWAFLGVFAA 458 Query: 447 IYLLLFT-----------------LILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFI 489 +++ + T L + + ++ H +M +++ YG E Sbjct: 459 MWVAVATAWDLWDKSASRKGRWHGLKRQSRSYWGMVLGHLGLAMVMAGATVVSNYGIERD 518 Query: 490 LNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNF-------LITDFHNPMCYENIQN 542 + G L+ D + I+F D+ N+ + YG+F L+TD H Sbjct: 519 VRMQPGDRALVGD-YEIVFTDIGERRGPNFTAQYGSFNVYLDGELVTDLH---------- 567 Query: 543 VLFSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLG 600 EKR Y + T++ I L DV++ +G+ ++ W R+ + P + W WLG Sbjct: 568 ---PEKRQYPVGMSVMTEADIDAGLFRDVFVAIGERISDDAWAIRLQYKPLVRWLWLG 622
ref|ZP_16370062.1| heme lyase subunit CcmF [Providencia sneebia DSM 19967] gb|EKT55995.1| heme lyase subunit CcmF [Providencia sneebia DSM 19967] (643 aa) Score: 190 bits (482), Expect: 2.1116e-45 Length: 579, Idn/Pos/Gap = 160/273/59 (27%/47%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINK 120 +++DFS+++V S+ P Y++ W ++EGSL L L F + ++ Sbjct: 62 VVNDFSVVYVANNSNTQLPVWYRVAATWGSHEGSLLLWVLLMSGWTFAVALGSYRMPLDV 121 Query: 121 LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTV--LEGNELNFLLQDINIL 178 + ++ + +V F+LF +IF F +EG++LN LLQD ++ Sbjct: 122 VARVLAIMGMISVGFLLF----------IIFTSNPFSRTLPAFPIEGHDLNPLLQDPGLI 171 Query: 179 IHPPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLNL---IGWFIASFSILLGSRW 235 HPPL+Y+ Y +S+ F+ F I + C + RF L WF + I+LGS W Sbjct: 172 FHPPLLYMGYVGFSVAFA--FAIASLLCGRLDSSLTRFARLWTMAAWFFLTLGIILGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + SL L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEQRATFKAWSLLLSISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNF-LIIFLYFFLVFIFILIVILLKKYTYFTSIFD-LNNHY 353 G LVRSG+L SVH F + P+ L I + LV L++ ++ + + + + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPSRGLFILAFMVLVIGGSLLIFAMRGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L+ + L +L P + K ++ FFN + LLL IG Sbjct: 350 SMLLANNVLLTVAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFIALMVPFSLLLGIG 409 Query: 405 ILL-----------TLIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFT 453 L+ L++I L ++ L F+ L ++ + + L + +I +L F Sbjct: 410 PLVRWGRDRPSAIRKLLLIALFSTVLLAFL-LPWLMQDKLTALTMLGLIMACWIAILAFA 468 Query: 454 -LILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL--NDNFII---- 506 + L + +K ++ L L +TI G F N+SI + + + D+ I Sbjct: 469 EMRLRMSKKIKLTPSYWGMVLAHLG-LAVTIVGITFSQNYSIERDVKMKPGDSVTIRAYT 527 Query: 507 -IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSIIYT 565 +F ++ NY GN +T+ N ++Q EKRFY + T++ I Sbjct: 528 FVFNGVHAANGPNYQGIIGNINVTE--NGKLITHLQ----PEKRFYTTSRAVMTEAAIDG 581 Query: 566 NLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 D+Y LG+ ++ W R+ + PF+ W W GGI + Sbjct: 582 GFTRDLYAALGEELGKDTWAMRLYYKPFVRWIWSGGILM 620
ref|YP_007340968.1| c-type cytochrome biogenesis protein CcmF [Enterobacteriaceae bacterium strain FGI 57] gb|AGB78783.1| c-type cytochrome biogenesis protein CcmF [Enterobacteriaceae bacterium strain FGI 57] (653 aa) Score: 190 bits (482), Expect: 2.25737e-45 Length: 611, Idn/Pos/Gap = 153/272/80 (25%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINK 120 +++DF++ +V + S+V P Y++ W +EGSL L L F + ++ Sbjct: 62 VVNDFTVRYVADNSNVALPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVALGSRRMPLDA 121 Query: 121 LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFT--VLEGNELNFLLQDINIL 178 + ++ + + F+LF ++F F ++G +LN LLQDI ++ Sbjct: 122 VARVLAVMGMISAGFLLF----------ILFTSNPFTRGLPEYPIDGRDLNPLLQDIGMI 171 Query: 179 IHPPLIYISYASYSIIFSIS-FTILIIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAY 237 HPPL+Y+ Y +S+ F+ + ++L + R W + I+LGS WAY Sbjct: 172 FHPPLLYMGYVGFSVAFAFAIASLLAGRLDTAWARWSRPWTQAAWVFLTMGIVLGSAWAY 231 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE S +PWL+ AL+HSL + K R ++ L ++ + + ++G Sbjct: 232 YELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEKRGSFRAWTVLLAISAFSLCLLGT 291 Query: 298 ILVRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYTYFTSI-FDLNNHYNF 355 LVRSG+L SVH F + P + I LV L++ LK + + L + +F Sbjct: 292 FLVRSGVLVSVHAFASDPARGMFILALLVLVIGGSLLLYALKGGSVRARVEHTLWSRESF 351 Query: 356 VYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG-- 404 + +L+I L +L P + K ++ FFN + LLL IG Sbjct: 352 LLGNNILLIAAMLVVLLGTLLPLVHKELGLGSISIGEPFFNSLFTVLMAPFALLLGIGPL 411 Query: 405 ------------------ILLTLIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFF 446 +LLTL++ ++ W L + +IG + +AL+ F Sbjct: 412 VRWRRDDAKKQIKRLVISLLLTLVLSIVL-PWWLQDRIAAMTVIG-------LMMALWVF 463 Query: 447 IYLLL-------------FTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFS 493 I++L+ L + + ++ ++ H + + Y E + Sbjct: 464 IFVLIELHERATHRHGFWRGLTKLSRSQWGMVLAHIGVAVTVTGIAFSQSYSVERDVRMK 523 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 G ++ ++ + +F+ + I N+ G +T P + L++EKRFY Sbjct: 524 AGDSIDIH-QYHFVFKGVRDIVGPNWFGGEGVIEVTRHGRP------EATLYAEKRFYSA 576 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL----LDSII 609 ++ T++ I L D+Y LG+ + W R+ + PF+ W W GG+ + L ++ Sbjct: 577 SRMMMTEAAIDGGLTRDLYAALGEELDDGSWAVRLYYKPFVRWIWYGGVLMALGGLCCML 636 Query: 610 FSLFRCIKNFQ 620 +R K+ Q Sbjct: 637 DPRYRMRKSRQ 647
ref|YP_003006566.1| cytochrome c-type biogenesis protein CcmF [Aggregatibacter aphrophilus NJ8700] ref|ZP_16417961.1| cytochrome c-type biogenesis protein CcmF [Aggregatibacter aphrophilus F0387] gb|ACS96479.1| cytochrome c-type biogenesis protein CcmF [Aggregatibacter aphrophilus NJ8700] gb|EHB89832.1| cytochrome c-type biogenesis protein CcmF [Aggregatibacter aphrophilus F0387] (652 aa) Score: 189 bits (481), Expect: 2.51599e-45 Length: 583, Idn/Pos/Gap = 162/263/62 (27%/45%/10%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ +VV S+ P Y+L +W ++EGSL L + ++ T + F +L Sbjct: 63 VNDFSVQYVVNNSNTTLPIYYRLSAVWGSHEGSLLL-WIWLLSLWSTAVALFSKRLPQEA 121 Query: 126 KLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFT--VLEGNELNFLLQDINILIHPPL 183 + I +I FL L ++F F F ++G ELN LLQD+ ++ HPPL Sbjct: 122 AARVLGIMGII--SIGFL---LFVLFTSNPFARTFPDFPVDGKELNPLLQDVGLIFHPPL 176 Query: 184 IYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGW 242 +Y+ Y +S+ F+ S L+ K R + W + I+LGS WAY ELGW Sbjct: 177 LYMGYVGFSVAFAFSIASLMTGKLDTAWARWSRPWTMAAWIFLTLGIVLGSWWAYYELGW 236 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GG+WFWD VE S +PWL ALLHSL + K + ++ L + + + ++G LVRS Sbjct: 237 GGWWFWDPVENASFMPWLAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLVRS 296 Query: 303 GLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL 362 G+L SVH F + P + L + +V I + + K + S D Y+ + L Sbjct: 297 GILVSVHAFASDPTRGLYVLAYLIVVIGGSLTLYAYKGSQIRS-RDNAERYSRESLLLLN 355 Query: 363 VILYFLYLLFVL---YFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGILLT-- 408 IL L VL P + K ++ FF+++ LLL IG L+ Sbjct: 356 NILLMTALCVVLLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGPLVKWR 415 Query: 409 -------------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLI 455 +II LI + L ++ I + + G + + L L+ + Sbjct: 416 RDQFSAIRTPVVVSVIIMLIAGFALPYLLQDKITVSAVLG----TMMTVIIVLLSLYEMH 471 Query: 456 LIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN------- 501 + SF+ H+ L + + T++G F N+S+ + + +N Sbjct: 472 QRATHRDSFLQGITKLSRSHWGMLLAHLGVAM-TVWGIAFSQNYSVERDVRMNVGDSVQI 530 Query: 502 DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKS 561 ++ F+ ++ NY+ IT + P + LF+EKR Y + T++ Sbjct: 531 ADYDFTFKGISDANGPNYIGGKAQIDITRYGKP------EATLFAEKRLYTVSKMPMTEA 584 Query: 562 IIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 I D+Y+ LG+ N W R+ + PFI W WLGG+F+ Sbjct: 585 AIDWGFTRDLYVALGEKLDNNAWALRLYYKPFIRWIWLGGLFM 627
ref|ZP_13489482.1| cytochrome c-type biogenesis protein CcmF [Rhizobium sp. PDO1-076] gb|EHS53735.1| cytochrome c-type biogenesis protein CcmF [Rhizobium sp. PDO1-076] (666 aa) Score: 189 bits (481), Expect: 2.55833e-45 Length: 595, Idn/Pos/Gap = 160/266/66 (26%/44%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+ V E S +P +YK+ +W N+EGS+ L + L ++ + +F L Sbjct: 62 VVSDFSVQNVYENSHSMKPMIYKISGVWGNHEGSMML-WVLILTLFSAMVAFFGTNLPDR 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVL--EGNELNFLLQDINILIHPP 182 +K +I + L I L + F + + EG +LN +LQDI + IHPP Sbjct: 121 LKANVLSVQAWITTAFT------LFILLTSNPFVRLSPVPAEGQDLNPVLQDIGLAIHPP 174 Query: 183 LIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTEL 240 L+Y+ Y +S+ FS + LI + + +R L W + I +GS WAY EL Sbjct: 175 LLYLGYVGFSVCFSFAIAALI-DGRIDAAWARWVRPWTLTAWTFLTAGISMGSYWAYYEL 233 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL ALLHS L+ K +++ ++ L + + + ++G LV Sbjct: 234 GWGGWWFWDPVENASFMPWLAGTALLHSALVMEKRDALKIWTVLLAIIAFSLSLLGTFLV 293 Query: 301 RSGLLQSVHTFVNSPN------FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYN 354 RSG+L SVH F P ++I + +F L LK F I + Sbjct: 294 RSGVLTSVHAFATDPTRGIFILCILIIFIGGALTLFALRAPTLKAGGLFQPI---SREGA 350 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALL-------FSFGFFNKILLLFI--GI 405 V +L + L+ LY P L++ D + +FGF LLL + G Sbjct: 351 LVLNNLILTVSAATVLIGTLY-PLLLETLTDEKISVGPPFFNLTFGFLMAPLLLAVPFGP 409 Query: 406 LLTLIIIFLINSWKLIFIFLGIIIIGGI------RGFP---EIFLALYFFI--------- 447 +L L+ + + +++ G+ ++ G+ G P + LA+ FF+ Sbjct: 410 MLAWKRGDLLAALQRLYLAAGLALVAGLVLFYAENGGPVLAVVGLAMAFFLIFGALADLW 469 Query: 448 ----------YLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 + L + + F + H +L ++ +T + E ++ G T Sbjct: 470 FRAGFGKQTASIAWSRLKGLPRSAFGTSLAHMGLGITVLGIVAVTTFETETVVEMKPGMT 529 Query: 498 LLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 F++ F + NY G+F I + +V +S KR Y + + Sbjct: 530 AEAG-GFVLTFDGMRAGQGPNYTEDRGHFTIRK-----AGVAVADV-WSSKRLYTARRMP 582 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 T++ I T +S +Y+ LGD + G RI + P+I WLG + ++ + SL Sbjct: 583 TTEAGIVTFGLSQLYVSLGDPMADGGLVVRIWWKPWILCIWLGTVVMMAGGVVSL 637
ref|ZP_05126240.1| cytochrome c-type biogenesis protein CcmF [gamma proteobacterium NOR5-3] gb|EED32787.1| cytochrome c-type biogenesis protein CcmF [gamma proteobacterium NOR5-3] (660 aa) Score: 189 bits (481), Expect: 2.55833e-45 Length: 592, Idn/Pos/Gap = 153/260/67 (25%/43%/11%) Query: 60 IGIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFIN 119 + I L DFS+ V S+ PS+YK +W N+EGSL L +++ +F + Sbjct: 57 LAIAFLQDDFSVKVVASNSNSLLPSIYKFSAVWGNHEGSLLL-----WVLILSFWLAAVA 111 Query: 120 KLTLIVKLTFFYNVYFIL--FNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 L+ + V ++ + F+S +L F+ +GN+LN LLQD + Sbjct: 112 TLSRGLPTVMLARVLSVMGFIGVGFMSFSLF-TSNPFERLLPGVPADGNDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKC--KFYVLYILRFLNLIGWFIASFSILLGSRW 235 +IHPPL+Y+ Y +S+ F+ + L+ + + + N + W S I+LGS W Sbjct: 171 IIHPPLLYMGYVGFSVAFAFAVAALMGGRLDAAWARWSRPWTN-VAWAFLSLGIMLGSWW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL AL+HSL K + + ++ L + + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLAGTALIHSLAATEKRGLFKSWTVLLAIFAFSLSLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNF 355 G LVRSG+L SVH F P + F L F+ I++ L Y + Sbjct: 290 GTFLVRSGVLTSVHAFAADPERGL----FILAFLAIVVGGSLTLYAVRAPSVRSRIGFGT 345 Query: 356 VYYIFLLVI------LYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTL 409 V LL++ + L +LF FP L+ +FN + + + L+ Sbjct: 346 VSRESLLLVNNVVFLVATLTVLFGTLFPLLMDALGQGKYSVGAPYFNAVFVPLMACLVPF 405 Query: 410 IIIFLINSWKLIFIFL--------GIIIIGGIRGFP-------------EIFLALYFFIY 448 + + I+ W+ ++ ++++ GFP + LA + Sbjct: 406 MGVGPISKWRDDSVYRWRSRMLVPALVVLACGAGFPLLSDQSFNIWVALAVVLAGWLVAG 465 Query: 449 L-------------LLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIG 495 L LL +L + ++ H F ++ ++ + Y E L + G Sbjct: 466 LVQDFRDRNSNSPSLLRSLRRQTPSYWGMVLAHCGFALAIIGVVATSQYNIERDLRMAPG 525 Query: 496 KTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQ--NVLFSEKRFYLY 553 +T L + F++ + NYL+ F + Y+ + + + +EKR YL Sbjct: 526 ETETLA-GYRFEFKETVRLRGANYLADGARFEV--------YQGDKLISTMLAEKRRYLA 576 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 + T++ I L D+YI +G+ G W R+ + P + W WLG IF+ Sbjct: 577 SGSVMTEAAIDGGLFRDLYIAMGEPVGAGGAWAIRLHYKPMVRWMWLGAIFM 628
ref|YP_959223.1| cytochrome c-type biogenesis protein CcmF [Marinobacter aquaeolei VT8] gb|ABM19036.1| cytochrome c-type biogenesis protein CcmF [Marinobacter aquaeolei VT8] (665 aa) Score: 189 bits (481), Expect: 2.68967e-45 Length: 598, Idn/Pos/Gap = 159/263/91 (26%/43%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL--- 121 L+ DFS+ +V S+ P YK +W +EGSL L + L I + + F KL Sbjct: 62 LVDDFSVAYVANNSNSMLPWYYKFSAVWGGHEGSLLL-WILMLIGWTLAVAIFSRKLPSV 120 Query: 122 --TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 + ++ + +V F+LF ++L FD +G +LN LLQDI +++ Sbjct: 121 MVSQVLSVLGMVSVGFLLF--------IILTSNPFDRLLPNVPADGQDLNPLLQDIGLIM 172 Query: 180 HPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAY 237 HPP++Y+ Y +S+ F+ +I + + R + W + I LGS WAY Sbjct: 173 HPPMLYMGYVGFSVAFAF-AIAALINGRLDAAWARWSRPWTTVAWSFLTVGIALGSWWAY 231 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE SLLPWL AL+HSL + K + + ++ L + + + ++G Sbjct: 232 YELGWGGWWFWDPVENASLLPWLSGTALMHSLAVTEKRGVFKSWTVLLAIVTFALSLLGT 291 Query: 298 ILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYN--- 354 LVRSG+L SVH F + P F L + I I+ L Y + + + + Y Sbjct: 292 FLVRSGVLTSVHAFASDPE----RGSFLLALLGITILASLTLYAFRAPVVHVRSRYGSLS 347 Query: 355 ----------FVYYIFLLVILYFLYLLFVLYF---------PFLIKCYND----NALLFS 391 + +LV + LY L + Y PF ++ LL Sbjct: 348 REIFLLLNNVLLVSATMLVAIGTLYPLVLDYLDLGKLSIGEPFFNTTFSPLAVATGLLLG 407 Query: 392 FGFFNKILLLFIGILLTLIIIFLINSWKLIFIFLGIIIIGGIRGF-PEIFLALYFFIYLL 450 G F++ G L ++ L S I ++I G GF P FL ++ +++ Sbjct: 408 AGIFSRWKKTDGGWLARKLLWPLAVS----LIASAAVMI-GYGGFAPWAFLGVFAAMWVT 462 Query: 451 LFTLILI--------------IKQKFSF---IVYHFNFFFIMLSLLLITIYGEEFILNFS 493 + T+ I +Q S+ ++ H +M +++ YG E + Sbjct: 463 VATVWDIWDKSTSRKGRWHGLKRQSRSYWGMVLGHLGLAMVMAGATVVSNYGIERDVRMQ 522 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNF-------LITDFHNPMCYENIQNVLFS 546 G ++ D + I+F D+ N+ + YG+F L+TD H Sbjct: 523 PGDRAMVGD-YEIVFTDIGERRGANFTAQYGSFNVYLDGELVTDLH-------------P 568 Query: 547 EKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 EKR Y + T++ I L DV++ +G+ ++ W R+ + P + W WLG + + Sbjct: 569 EKRQYPVGMSVMTEADIDAGLFRDVFVAIGERISDDAWAIRLQYKPLVRWLWLGSLVM 626
ref|ZP_10460638.1| cytochrome c-type biogenesis protein CcmF [Bartonella washoensis 085-0475] gb|EJF85738.1| cytochrome c-type biogenesis protein CcmF [Bartonella washoensis 085-0475] (661 aa) Score: 189 bits (481), Expect: 2.87533e-45 Length: 615, Idn/Pos/Gap = 190/284/107 (30%/46%/17%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL---- 121 +SDFS+L V+E S +P LYK+ +W N+EGS+FL + L ++ T + F L Sbjct: 63 VSDFSVLNVIEHSHSEKPMLYKITGVWGNHEGSMFL-WVLSLAVFSTLMALFSQHLPEQF 121 Query: 122 -TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIH 180 L++ F F+LF I F+S FLR N L+GN+LN LLQDI + IH Sbjct: 122 KALVLSCQSFLTSAFLLF-ILFVSNP----FLRV----NPPALQGNDLNPLLQDIALAIH 172 Query: 181 PPLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 PPL+Y+ Y +S+ FS + LI+ + ++ +L L+ W + I++GS WAY Sbjct: 173 PPLLYLGYVGFSLCFSFAIAALIMGHVDGNWARWVRPWL-LLSWCFLTLGIMVGSYWAYY 231 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE +S +PWL ALLHS L+ K ++ +LFL + + + ++G Sbjct: 232 ELGWGGYWFWDPVENVSFMPWLSGTALLHSSLVLEKRETLKSWTLFLALLTFSLSLMGTF 291 Query: 299 LVRSGLLQSVHTFVNSPN---FLIIFLYFFLV---FIFILIVILLKKYTYFTSIFD---- 348 LVRSGLL SVH+F P ++ L FF +F L V +LK F I Sbjct: 292 LVRSGLLISVHSFAVDPARGWAILALLSFFTGGAFLLFTLRVPVLKTGKLFQPISREGFI 351 Query: 349 -LNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKIL-------- 399 LNN LL + + L+ LY P+L++ + FFN Sbjct: 352 ILNN--------LLLTTITAIVLIGTLY-PYLVEALTGQKISVGASFFNLTCGPLMVLLL 402 Query: 400 ----------------------LLFIGILLTLI--IIFLINSWKLIFIFLGIIIIGGIRG 435 L F+ IL+ LI I F + S + IF LG Sbjct: 403 LVLPFGSMMAWKRGDFLAVVERLWFVLILICLICFITFYVTSLRDIFAVLG--------- 453 Query: 436 FPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSL---------LLITIYG- 485 I LA + F+ L+ +K +F V F + S+ L IT++G Sbjct: 454 ---IGLAAFVFLSSLVDLWEKSGPRKIAFSVRVKRFLGLPWSVFGAAMAHMGLGITLFGI 510 Query: 486 -------EEFILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYE 538 +E IL IG + + I F ++ NY + NF I + N E Sbjct: 511 VCVANVSQERILTMHIGDIVTIAGR-TICFDKVHEGTGPNYSAMEFNFKI--YEN----E 563 Query: 539 NIQNVLFSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFW 598 N+ + + KRFY Q+ T+ I + +S +Y++ G + + G I + P++ W Sbjct: 564 NVVRNVTASKRFYSSQNTSTTEVGIQNHGLSQLYVVPGRID-DQGLVVHIWWKPYVICIW 622 Query: 599 LGGIFLLDSIIFSLF 613 LG + + FSLF Sbjct: 623 LGALIMAMGGCFSLF 637
ref|ZP_01894367.1| cytochrome c-type biogenesis protein CcmF [Marinobacter algicola DG893] gb|EDM47589.1| cytochrome c-type biogenesis protein CcmF [Marinobacter algicola DG893] (670 aa) Score: 189 bits (481), Expect: 2.97291e-45 Length: 586, Idn/Pos/Gap = 156/260/70 (26%/44%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL----- 121 DFS+ +V S+ P YK +W +EGSL L + L + + + F +L Sbjct: 64 DDFSVAYVANNSNSMLPWYYKFSAVWGGHEGSLLL-WVLMLVGWTLAVAVFSRRLPSVMV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 + ++ + V F+LF I + FD +G +LN LLQD +++HP Sbjct: 123 SQVLSVLGMVTVGFLLFTI--------MTSNPFDRTLPNVPADGADLNPLLQDFGLIVHP 174 Query: 182 PLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTE 239 P++Y+ Y +S+ F+ +I K + R + W S I LGS WAY E Sbjct: 175 PMLYMGYVGFSVAFAF-AIAALINGKLDAAWARWSRPWTTVAWAFLSLGIALGSWWAYYE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE SLLPWL AL+HSL + K + + ++ L + + + ++G L Sbjct: 234 LGWGGWWFWDPVENASLLPWLSGTALMHSLAVTEKRGVFKSWTVLLAIVTFALSLLGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHY-NFVYY 358 VRSG+L SVH F + P+ F L + I IV L Y + + + + Y + Sbjct: 294 VRSGVLTSVHAFASDPDRGT----FLLALLAITIVSSLTLYAFRAPVVHVRSRYGSLSRE 349 Query: 359 IFLLV-----ILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN---KILLLFIGILLTLI 410 IFLL+ + L +L +P ++ + L FFN L + G+LL Sbjct: 350 IFLLMNNVLLVAATLLVLVGTLYPLVLDYLDMGRLSIGEPFFNLTFSPLGIAAGLLLGAG 409 Query: 411 IIFLINS-----------WKLIFIFLGIIIIGGIRGF----PEIFLALYFFIYLLLFT-- 453 I W L +G + + G+ P F L+ +++ + T Sbjct: 410 IFSRWKKTDGGWLGRKLLWPLAVSMIGTSAV--LVGYGTFEPWAFGGLFSAMWITVATFW 467 Query: 454 ------------LILIIKQKFSF---IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTL 498 L + +Q S+ + H M + + YG E + S G T Sbjct: 468 DLWEKSGSRKGRLHGLRRQSRSYYGMVFGHLGLAITMAGATVASNYGIERDVRMSPGDTA 527 Query: 499 LLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 ++ D + + F ++ + N+ + YG F + D + + L+ EKR Y+ Q Sbjct: 528 MVGD-YRVAFAEIGNRRGQNFTAEYGRFEVYDSDGGLI-----STLYPEKRQYMVQRNTM 581 Query: 559 TKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I L D+++ +G+ ++ W R+ + P + W WLG +F+ Sbjct: 582 TEAGIDGGLFRDIFVAIGERVSDDAWAIRLQYKPLVRWLWLGALFM 627
ref|YP_006523636.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas stutzeri DSM 10701] gb|AFN77278.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas stutzeri DSM 10701] (657 aa) Score: 189 bits (480), Expect: 3.63203e-45 Length: 577, Idn/Pos/Gap = 155/262/50 (26%/45%/8%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 + DFS+ +V + S+ P YK +W +EGSL L F+ + +TF ++ Sbjct: 62 MTDDFSVAYVAQNSNSALPWYYKFSAVWGAHEGSLLLWAFI--LAGWTFAVAIFSRQLPE 119 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 L V L +I FL L L++ F+ + ++G +LN LLQD +++HPP++ Sbjct: 120 DMLARVLGV-MGLISIGFL-LFLIVTSNPFERLLPQSPMDGRDLNPLLQDFGLVVHPPML 177 Query: 185 YISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTELGW 242 Y+ Y +S+ F+ ++ + + R LI W I LGS WAY ELGW Sbjct: 178 YMGYVGFSVAFAF-AIAALLGGRLDAAWARWSRPWTLIAWAFLGTGIALGSWWAYYELGW 236 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GG+WFWD VE S +PWL+ AL+HSL + K + + ++ L +A + + ++G LVRS Sbjct: 237 GGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRS 296 Query: 303 GLLQSVHTFVNSPNFLI-IFLYFFLVFIFILIVILLKKYTYFTSI-FDLNNHYNFVYYIF 360 G+L SVH F P + I ++ LV L + L+ + + F L + + Sbjct: 297 GVLTSVHAFATDPARGVFILVFLLLVVGGSLTLFALRAPVVKSQVGFGLWSRETLLLVNN 356 Query: 361 LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWK- 419 LL+++ +L +P L+ + L +FN + L IG+L+ + + ++ WK Sbjct: 357 LLLVVATAMILLGTLYPLLLDALSGAKLSVGPPYFNAMFLPLIGVLMLTLGVGVLVRWKD 416 Query: 420 -----LIFIFLGIIIIGGIRG------FPEIFLALYFFIYLLLFTLILIIKQKFSFIVY- 467 L+ + ++I+G I G F + A+ L + +I ++ + Sbjct: 417 TPLQWLLGMLTPVLIVGAILGGLGSMVFGDFHWAVLAVCLLSAWVVIAGVRDVLDKTRHK 476 Query: 468 -------------------HFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFIIIF 508 HF + ++L++ +E L + G++L L + +F Sbjct: 477 GLLKGARSLTPSYWGMHLAHFGLVVCAMGVVLVSQQSDERDLRLAPGESLELG-GYRFVF 535 Query: 509 RDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSIIYTNLM 568 H NY S G + D + L EKR Y Q + T++ I Sbjct: 536 EGAQHFEGPNYTSDKGTIRVFDGDKRIA------TLHPEKRLYTVQQMPMTEAGIDPGFT 589 Query: 569 SDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 D+Y+ LG+ ENG W R+ PF+ W WLG + + Sbjct: 590 RDLYVALGE-PLENGAWAVRVHIKPFVRWIWLGSLLM 625
ref|ZP_10471646.1| cytochrome c-type biogenesis protein CcmF [Bartonella vinsonii subsp. arupensis Pm136co] ref|ZP_17688472.1| cytochrome c-type biogenesis protein CcmF [Bartonella vinsonii subsp. arupensis OK-94-513] gb|EJF87616.1| cytochrome c-type biogenesis protein CcmF [Bartonella vinsonii subsp. arupensis OK-94-513] gb|EJF98697.1| cytochrome c-type biogenesis protein CcmF [Bartonella vinsonii subsp. arupensis Pm136co] (660 aa) Score: 189 bits (480), Expect: 4.04815e-45 Length: 591, Idn/Pos/Gap = 175/279/81 (29%/47%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+SDFS+L VVE S +P LYK+ +W N+EGS+ L + L + T + F L Sbjct: 62 LVSDFSVLNVVENSHSEKPILYKITGVWGNHEGSMLL-WVLSLAFFSTLMALFSQHLPEQ 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL--IFLRFDFF-FNFTVLEGNELNFLLQDINILIHP 181 K IL S+++ LL +FL F + L+GN+LN LLQDI + IHP Sbjct: 121 FK-------ALILICQSWITSAFLLFILFLSNPFLRVHPPALQGNDLNPLLQDIALAIHP 173 Query: 182 PLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PL+Y+ Y +SI FS + LI K + ++ R L+ W + I++GS WAY E Sbjct: 174 PLLYLGYVGFSICFSFAIAALITGHVDKIWAHWV-RPWVLLSWIFLTLGIMVGSYWAYYE 232 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE +S +PWL ALLHS ++ K ++ +LFL + + + ++G L Sbjct: 233 LGWGGYWFWDPVENVSFMPWLSGTALLHSTIVLEKRDTLKSWTLFLALLTFSLSLMGTFL 292 Query: 300 VRSGLLQSVHTFVNSPN---FLIIFLYFFLV---FIFILIVILLKKYTYFTSIFDLNNHY 353 VRSGLL SVH+F P +++ L FF+ F+F L V +L+ F I + Sbjct: 293 VRSGLLMSVHSFAVDPARGWAILVLLSFFMGGAFFLFALRVPVLQTGRLFQPI----SRE 348 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIF 413 F+ LL+ +L +P+ I+ + + FFN L G L+ L+++F Sbjct: 349 GFIILNNLLLTTITATVLVGTLYPYFIEVFTGQKISVGAPFFN----LTCGPLMMLLLLF 404 Query: 414 L----INSWKLIFIFL---------GIIIIGG-----IRGFPEIFLALYFFIYLLLF--- 452 + + +WK IF ++ + F +IF AL + + +F Sbjct: 405 VPFGSMMAWKRGDIFAVFERLWFVFALVCVACFITFYAASFRDIFSALGIGLSVFVFLGS 464 Query: 453 -------------TLILIIKQ-------KFSFIVYHFNFFFIMLSLLLITIYGEEFILNF 492 L++ +K+ F + H + ++ + +G+E IL Sbjct: 465 LADLWEKSGHRKIALLMRVKRFMGLPWSVFGAAIAHMGLGVTLFGIVCVATFGQERILTT 524 Query: 493 SIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFSEKRF 550 IG + + + L+ + + N N+ DFH + YEN V + + KRF Sbjct: 525 HIGDRVTIAGKTL----RLDEVRNGNGP----NYSTMDFHFTV-YENKSAVRRVTASKRF 575 Query: 551 YLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGG 601 Y Q+ T+ I +S +YI+ G + + G I + P++ WLG Sbjct: 576 YSSQNTSTTEVGIQNYGLSQLYIVPGRID-DQGLVLHIWWKPYVICVWLGA 625
ref|YP_003618140.1| cytochrome c-type biogenesis protein CcmF [Legionella pneumophila 2300/99 Alcoy] gb|ADG24188.1| cytochrome c-type biogenesis protein CcmF [Legionella pneumophila 2300/99 Alcoy] (650 aa) Score: 189 bits (480), Expect: 4.08207e-45 Length: 590, Idn/Pos/Gap = 168/265/64 (28%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+ DFS+++V+ SS+ P YK +W +EGS+ L + + + +F + L Sbjct: 62 LMDDFSVIYVLNNSSLLLPWFYKFCAVWGGHEGSMLL-WVAILSFWMILVCFFSSSLDTE 120 Query: 125 VKLTFFYNVYFILFNISFLSLT--LLLIFLRFDFFFNFTVL--EGNELNFLLQDINILIH 180 ++ +L + +LS+ L L+ F F VL +G +LN LLQD L H Sbjct: 121 MRAR-------VLVILGWLSIGFILFLLMTSNPFLRQFQVLNTQGRDLNPLLQDPGFLFH 173 Query: 181 PPLIYISYASYSIIFSISFTIL-IIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PP++Y+ Y + + F+ + L K + R L W + I LGS WAY E Sbjct: 174 PPMLYMGYVGFCVAFAFAIAALWAGKVETSWSKWTRPWTLAAWCCLTAGITLGSWWAYRE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL+ ALLHSL + + + ++ L +A + + +IG L Sbjct: 234 LGWGGWWFWDPVENASFMPWLVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSLSLIGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY- 358 VRSG+L SVH F P + L F L I + + L + +N H + Sbjct: 294 VRSGVLTSVHAFAVDPQRGLYILGFLLFVIGGSLTLFL----FRAQTLQVNKHPGLLSRE 349 Query: 359 -------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 +FL+VI+ L +L +P L++ L +FN + + + LL L+ Sbjct: 350 SALLLNNVFLVVIM--LTVLMGTVYPLLVEGLGLGKLSVGAPYFNAVFVPLMIPLLLLMG 407 Query: 412 IFLINSW----------KLIFIFLGIIIIGGIRGF---PEI----FLALYFFIYLLLFTL 454 + + W KL IFL +I+ I F EI L L ++LL T Sbjct: 408 LGVRLKWQNDCWRDVFRKLNRIFLLSLILPVILLFCTSTEIHLTALLGLILAFWVLLSTA 467 Query: 455 -----------ILIIKQKF-SFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + + Q + ++ H ++ + + + YG + + S GK + L D Sbjct: 468 NAAYHKVRDRGVAGVGQAYWGMVLAHCGVAATVIGIAVSSAYGVQDDVRMSPGKQVSLLD 527 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + I F + + NY T F I Y+N +F EKR Y + T+S Sbjct: 528 -YQIGFINQTPLNGPNYKGTRAEFSIQ-------YQNKTRQIFPEKRVYTIGQMPMTESA 579 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 I D+YI LG+ E+ W RI + P + W W GG +L + +L Sbjct: 580 IDVTPFRDIYIALGEPLSEDAWSVRIYYKPLVRWIWAGGFMILAGGVLAL 629
gb|AAM00397.1|AF386079_7 CcmF [Legionella pneumophila 130b] emb|CBW99158.1| cytochrome C-type biogenesis protein CcmF [Legionella pneumophila 130b] (650 aa) Score: 189 bits (480), Expect: 4.08207e-45 Length: 590, Idn/Pos/Gap = 169/265/64 (28%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+ DFS+++V+ SS+ P YK +W +EGS+ L + + + +F + L Sbjct: 62 LMDDFSVIYVLNNSSLLLPWFYKFCAVWGGHEGSMLL-WVAILSFWMILVCFFSSSLDTE 120 Query: 125 VKLTFFYNVYFILFNISFLSLT--LLLIFLRFDFFFNFTVL--EGNELNFLLQDINILIH 180 ++ +L + +LS+ L L+ F F VL +G +LN LLQD L H Sbjct: 121 MRAR-------VLVILGWLSIGFILFLLMTSNPFLRQFQVLNTQGRDLNPLLQDPGFLFH 173 Query: 181 PPLIYISYASYSIIFSISFTIL-IIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PP++Y+ Y + + F+ + L K + R L W + I LGS WAY E Sbjct: 174 PPMLYMGYVGFCVAFAFAIAALWAGKVETSWSKWTRPWTLAAWCCLTAGITLGSWWAYRE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL+ ALLHSL + + + ++ L +A + + +IG L Sbjct: 234 LGWGGWWFWDPVENASFMPWLVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSLSLIGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY- 358 VRSG+L SVH F P + L F L I + + L + +N H + Sbjct: 294 VRSGVLTSVHAFAVDPQRGLYILGFLLFVIGGSLTLFL----FRAQTLQVNKHPGLLSRE 349 Query: 359 -------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 +FL+VI+ L +L +P L++ L +FN + + I LL L+ Sbjct: 350 SALLLNNVFLVVIM--LTVLMGTVYPLLVEGLGLGKLSVGAPYFNAVFVPLIIPLLLLMG 407 Query: 412 IFLINSW----------KLIFIFLGIIIIGGIRGF---PEI----FLALYFFIYLLLFTL 454 + + W KL IFL +I+ I F EI L L ++LL T Sbjct: 408 LGVRLKWQNDCWRDVFRKLNRIFLLSLILPVILLFCTSTEIHLTALLGLILAFWVLLSTA 467 Query: 455 -----------ILIIKQKF-SFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + + Q + ++ H ++ + + + YG + + S GK + L D Sbjct: 468 NAAYHKVRDRGVAGVGQAYWGMVLAHCGVAATVIGIAVSSAYGVQDDVRMSPGKQVSLLD 527 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + I F + + NY T F I Y+N +F EKR Y + T+S Sbjct: 528 -YQIGFINQTPLNGPNYKGTRAEFSIQ-------YQNKTRQIFPEKRVYTIGQMPMTESA 579 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 I D+YI LG+ E+ W RI + P + W W GG +L + +L Sbjct: 580 IDVTPFRDIYIALGEPLSEDAWSVRIYYKPLVRWIWAGGFMILAGGVLAL 629
ref|YP_004144031.1| cytochrome C-type biogenesis protein CcmF [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV13981.1| cytochrome c-type biogenesis protein CcmF [Mesorhizobium ciceri biovar biserrulae WSM1271] (663 aa) Score: 189 bits (479), Expect: 4.74358e-45 Length: 598, Idn/Pos/Gap = 166/258/75 (27%/43%/12%) Query: 68 DFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVKL 127 DFS+ V E S QP +YK+ W N+EGS+ L +++ TF + + Sbjct: 64 DFSVASVWENSHSLQPLIYKITGTWGNHEGSMLL-----WVLILTFFGALVAAFGSNLPA 118 Query: 128 TFFYNVYFILFNISFLSLTLLLIFLRFDFF--FNFTVLEGNELNFLLQDINILIHPPLIY 185 T NV + I + L I + F N +EG +LN +LQD+ + IHPP +Y Sbjct: 119 TLRANVLAVQGAIG--AAFFLFILATSNPFIRLNPAPIEGRDLNPILQDLGLAIHPPFLY 176 Query: 186 ISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELGWG 243 + Y +SI FS S LI + + + +R L+ W + I +GS WAY ELGWG Sbjct: 177 LGYVGFSICFSFSVAALI-EGRIDASWARWVRPWTLVAWMFLTGGIAMGSYWAYYELGWG 235 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 GFWFWD VE S +PWL ALLHS ++ K +++ +L L + + + ++G LVRSG Sbjct: 236 GFWFWDPVENASFMPWLAGTALLHSAIVMEKRSALKIWTLLLAILTFSLSLLGTFLVRSG 295 Query: 304 LLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF 360 +L SVH F P F++ L F+ L + + T ++ V Sbjct: 296 VLTSVHAFATDPTRGVFILCILTLFIGGSLALFALRASRLTTGGLFHPISREGALVLNNL 355 Query: 361 LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLIN---S 417 L L+ LY P ++ ++ + + FFN L F +++ L+++ + Sbjct: 356 FLTTATATVLVGTLY-PLAVEAFSADKISVGAPFFN---LTFGPLMVPLLLVVPFGPLLA 411 Query: 418 WKLIFIFL-------------------GIIIIGGIRGFPEIFLAL--YFFIYLLLFTLI- 455 WK +F + I GG +F AL ++L+L L Sbjct: 412 WKRGDVFAVAQRLMVAFAAALLATLVTALFIDGG-----SVFAALGVGLAVWLILGALTD 466 Query: 456 LIIKQKFSFIVYH-------------FNFFFIMLSLLLITI-------YGEEFILNFSIG 495 L +K F + F F L L L T+ +G E IL+ G Sbjct: 467 LAVKSGFRTVATGIMVRRLLGLPRSVFGTAFAHLGLGLTTLGIVGTLCFGTEKILSMHAG 526 Query: 496 KTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 +T+ L+ + + F L NY G F + E + S KRFY + Sbjct: 527 ETVELSGH-TLRFVGLYPAQGPNYSEDRGRFELIGVSGSPVGE-----ISSAKRFYPVRQ 580 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSLF 613 + T+S I T S +YI LGD + R+ + P ++ W GG+ ++ SL Sbjct: 581 MTTTESGIRTIGFSQLYISLGDEGKDGSVVVRLWWKPLVTLIWGGGLMMMAGAAMSLM 638
ref|ZP_09232904.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20429] dbj|GAA69153.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20429] (656 aa) Score: 189 bits (479), Expect: 4.78332e-45 Length: 586, Idn/Pos/Gap = 157/261/70 (26%/44%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 DF++ +V SS P YK+ + W +EG++ L +Q + + L +++ Sbjct: 64 DDFTVSYVAYHSSSTLPWYYKITSTWGGHEGAILLWLVMQ-AGWTAVVAARSKSLPWVLR 122 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLIYI 186 + F+ + F+ TLLL F+ + +EG +LN LLQD ++IHPPL+Y+ Sbjct: 123 ARVLGVLGFL--GVGFMMYTLLLSS-PFERLLPYFPVEGRDLNPLLQDPGMIIHPPLLYM 179 Query: 187 SYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWGGF 245 Y S+ FS + L+ K R + W + I +GS WAY+ELGWGG+ Sbjct: 180 GYVGLSVAFSFAIAALLTGKLDNTWAKWSRPWTMTAWGFLTLGITIGSWWAYSELGWGGW 239 Query: 246 WFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSGLL 305 WFWD VE SL+PWL++ ALLHSL + K + + ++ L +A + + ++G +VRSG++ Sbjct: 240 WFWDPVENASLMPWLVATALLHSLSVTEKRGVFKSWTVLLAIAAFSLSLLGTFIVRSGII 299 Query: 306 QSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL--- 362 SVH F P+ + F L F+ I++ L Y S Y FV L Sbjct: 300 VSVHAFATDPDRGL----FILAFLGIVVGGGLALYALRVSQVHSEGRYKFVSREVALWLN 355 Query: 363 ---VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILLLFIGILLTLI--IIFL 414 +++ L +L P + K ++ FFNK I+L+ IL+ + + + Sbjct: 356 NIFLVVATLIVLLGTLLPMVHKEMGLGSISIGEPFFNKMFAIILVPFAILMGIGPFLRWK 415 Query: 415 INSW-----KLIFIFLGIIIIGGIRGF-------PEIFLALYFFIYLLLFTLILIIKQK- 461 N W K++ L ++I + F P LA +++ + T I I + Sbjct: 416 QNKWAFLQNKILMGVLASVVITCVWLFSSYDLVKPLTLLATTLAVWIAISTGIDIYTKSA 475 Query: 462 ----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 ++ ++ H F++ + L + Y E ++ G T+ LN+ + Sbjct: 476 VHGTLKEGLKRLGVSYWAMVLGHIGISFVIAGVTLTSAYSVERDVSMKQGDTVQLNE-YE 534 Query: 506 IIFRDLNHIWSTNYLSTYG-------NFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 F + I NY G N L+T H +EKR Y Sbjct: 535 YRFDGVKTIRGPNYSGHAGVVSVLKNNELVTRLH-------------AEKRKYDIGMQFM 581 Query: 559 TKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I D+Y+ LG+ + W RI PF+ W W+GG+ + Sbjct: 582 TEAAIDAGFTRDLYLALGEQLSQGAWSLRIYHKPFVRWMWIGGVLI 627
ref|ZP_00960560.1| cytochrome c-type biogenesis protein CcmF [Roseovarius nubinhibens ISM] gb|EAP76131.1| cytochrome c-type biogenesis protein CcmF [Roseovarius nubinhibens ISM] (657 aa) Score: 189 bits (479), Expect: 4.78332e-45 Length: 588, Idn/Pos/Gap = 152/253/70 (25%/43%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+ VV S ++P +YK+ +W N+EGS+ L + L ++ + +F L Sbjct: 62 VVSDFSLRLVVLNSHTDKPLIYKISGVWGNHEGSMLL-WVLIVALFGATVAWFGTALPPS 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFTVLEGNELNFLLQDINILIHPP 182 ++ + +F++ L FLR + G +LN LLQD + HPP Sbjct: 121 LRARVL--AVQAMIGAAFMAFLLWTSNPFLRL----AVPPMNGEDLNPLLQDPGLAFHPP 174 Query: 183 LIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTEL 240 +Y+ Y S+ FS + LI + + + +R L W + I LGS WAY EL Sbjct: 175 FLYLGYVGLSMTFSFALAALI-EGRVDAAWGRWVRPYTLAAWVFLTIGIALGSWWAYYEL 233 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGGFWFWD VE S +PWLLS+ALLHS ++ K ++ ++ L + + +IG + Sbjct: 234 GWGGFWFWDPVENASFMPWLLSVALLHSAIVVEKRESLKSWTILLAILGFGFSLIGTFIT 293 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFI-LIVILLKKYT-YFTSIFDLNNHYNF-VY 357 RSGLL SVH F N P ++ L VF+ LI+ +++ T +F L + V Sbjct: 294 RSGLLTSVHAFANDPERGMVLLLILAVFMMAGLILFVVRAGTMQARGVFGLGSRETMLVI 353 Query: 358 YIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINS 417 LL + F+ + L+ P + + + D L FF+ F+ +L ++ + + Sbjct: 354 NNVLLAVAAFIVFVGTLW-PLVAEMFFDRKLTVGAPFFDTAFTPFMVVLGIILPVGAMLP 412 Query: 418 WKL------------------------------------IFIFLGIIIIGGIRGFPEIFL 441 WK + +FLG ++ G + Sbjct: 413 WKRGKIGSVMRSLMPAFLLALAVAALIYAMQSGKSALAPVGMFLGTWLVAG------ALV 466 Query: 442 ALYFFI-----YLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGK 496 L+ L + + + + V H M + + + E I +G Sbjct: 467 DLWGRTGRQGWQQRLGRMRRLPRADWGKAVAHAGMGVTMAGIAGLMAWESEDIRVAQVGD 526 Query: 497 TLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 ++ + I R +N + NY +T ++ E+I V F EKR Y + Sbjct: 527 RFEVS-GYTIWLRAVNEVPGPNYRATRAEVALS-----RGSESIGTV-FPEKRIYPVAGM 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y+++GD GW R P +W W G I + Sbjct: 580 PTTEAGIDNGFLRDLYVVIGDKQEGGGWAVRTYVKPLANWIWGGAILM 627
ref|ZP_10151369.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas sp. M47T1] gb|EIK93437.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas sp. M47T1] (657 aa) Score: 189 bits (479), Expect: 5.46649e-45 Length: 600, Idn/Pos/Gap = 158/270/66 (26%/45%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTF-INYFINKLTL 123 + DFS+ +V S+ P YK +W +EGSL L + + +TF ++ F +L Sbjct: 62 MTDDFSVGYVASNSNSALPWYYKFSAVWGAHEGSLLL--WALILGGWTFAVSVFSRQLPQ 119 Query: 124 IVKLTFFYNVYFILFNIS--FLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ V ++ IS FL L L+L F G +LN LLQD ++IHP Sbjct: 120 VM----LARVLAVMGMISTGFL-LFLILTSDPFARILPQVPANGADLNPLLQDPGLIIHP 174 Query: 182 PLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTE 239 P++Y+ Y +S+ FS + L+ + + R ++ W I LGS WAY E Sbjct: 175 PMLYMGYVGFSVAFSFAIAALL-GGRLDAAWARWSRPWTIVAWSFLGLGITLGSWWAYYE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L +A + + ++G L Sbjct: 234 LGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFDLNNHY 353 VRSG+L SVH F + P + L F L + F L ++K + F L + Sbjct: 294 VRSGVLTSVHAFASDPARGVFILIFLLCVVGGSLTLFALRAPVVKSHVG----FGLWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIF 413 + L++++ +L +P + + L +FN + + +G+L+ ++ + Sbjct: 350 TLLLANNLVLVVAASMILLGTLYPLAVDALSGAKLSVGPPYFNALFVPLMGLLMVVMAVG 409 Query: 414 LINSWK----------LIFIFLGIIIIGGIRG-----FPEIFL---ALYFFIYL------ 449 ++ WK L + +G +++ I G F L AL ++ L Sbjct: 410 VLVRWKDTPLQWLRGMLTPVLIGAVVLAPIGGLLVDNFDWAILTVFALAAWVLLAGARDL 469 Query: 450 --------LLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN 501 LL + + + V H L ++L + + + L + G+++ L Sbjct: 470 FDKTRHKGLLKGARSLTRSYWGMHVAHVGIAVCALGVVLSSSHSAQRDLRMAPGESVDLA 529 Query: 502 DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKS 561 + IF H N+ S G ++ + VL+ EKR Y Q + T++ Sbjct: 530 -GYHFIFDGAQHYQGPNFTSDRGTIRVSKDGKDV------TVLYPEKRLYTVQQSMMTEA 582 Query: 562 IIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFLLDSIIFSLFRCIKNFQ 620 I D+Y+ LG+ ENG W R+ PF+ W W GG LL ++ +L + ++ Sbjct: 583 GIDAGFTRDLYVALGE-PLENGAWAVRVHVKPFVRWIWFGG--LLTALGGALAATDRRYR 639
ref|YP_094896.1| cytochrome C biogenesis protein CcmF [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] ref|YP_123251.1| cytochrome C-type biogenesis protein CcmF [Legionella pneumophila str. Paris] ref|YP_006508076.1| heme lyase, CcmF subunit [Legionella pneumophila subsp. pneumophila] gb|AAU26949.1| cytochrome c-type biogenesis protein CcmF [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] emb|CAH12074.1| cytochrome C-type biogenesis protein CcmF [Legionella pneumophila str. Paris] emb|CCD08183.1| heme lyase, CcmF subunit [Legionella pneumophila subsp. pneumophila] (650 aa) Score: 188 bits (478), Expect: 5.79527e-45 Length: 590, Idn/Pos/Gap = 168/265/64 (28%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+ DFS+++V+ SS+ P YK +W +EGS+ L + + + +F + L Sbjct: 62 LMDDFSVIYVLNNSSLLLPWFYKFCAVWGGHEGSMLL-WVAILSFWMILVCFFSSSLDTE 120 Query: 125 VKLTFFYNVYFILFNISFLSLT--LLLIFLRFDFFFNFTVL--EGNELNFLLQDINILIH 180 ++ +L + +LS+ L L+ F F VL +G +LN LLQD L H Sbjct: 121 MRAR-------VLVILGWLSIGFILFLLMTSNPFLRQFQVLNTQGRDLNPLLQDPGFLFH 173 Query: 181 PPLIYISYASYSIIFSISFTIL-IIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PP++Y+ Y + + F+ + L K + R L W + I LGS WAY E Sbjct: 174 PPMLYMGYVGFCVAFAFAIAALWAGKVETSWSKWTRPWTLAAWCCLTAGITLGSWWAYRE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL+ ALLHSL + + + ++ L +A + + +IG L Sbjct: 234 LGWGGWWFWDPVENASFMPWLVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSLSLIGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY- 358 VRSG+L SVH F P + L F L I + + L + +N H + Sbjct: 294 VRSGVLTSVHAFAVDPQRGLYILGFLLFVIGGSLTLFL----FRAQTLQVNKHPGLLSRE 349 Query: 359 -------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 +FL+VI+ L +L +P L++ L +FN + + + LL L+ Sbjct: 350 SALLLNNVFLVVIM--LTVLMGTVYPLLVEGLGLGKLSVGAPYFNAVFVPLMIPLLLLMG 407 Query: 412 IFLINSW----------KLIFIFLGIIIIGGIRGF---PEI----FLALYFFIYLLLFTL 454 + + W KL IFL +I+ I F EI L L ++LL T Sbjct: 408 LGVRLKWQNDCWRDVFRKLNRIFLLSLILPVILLFCTSTEIHLTALLGLILAFWVLLSTA 467 Query: 455 -----------ILIIKQKF-SFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + + Q + ++ H ++ + + + YG + + S GK + L D Sbjct: 468 NAAYHKVRDRGVAGVGQAYWGMVLAHCGVAATVIGIAVSSAYGVQDDVRMSPGKQVNLLD 527 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + I F + + NY T F I Y+N +F EKR Y + T+S Sbjct: 528 -YQIGFINQTPLNGPNYKGTRAEFSIQ-------YQNKTRKIFPEKRVYTIGQMPMTESA 579 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 I D+YI LG+ E+ W RI + P + W W GG +L + +L Sbjct: 580 IDVTPFRDIYIALGEPLSEDAWSVRIYYKPLVRWIWAGGFMILAGGVLAL 629
ref|ZP_12498674.1| cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. Anand1_goat] gb|EGP05547.1| cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. Anand1_goat] (592 aa) Score: 188 bits (478), Expect: 6.19531e-45 Length: 585, Idn/Pos/Gap = 156/269/66 (26%/45%/11%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ ++V S+ N P Y+L +W ++EGSL L + ++ + +F +L Sbjct: 4 VNDFSVQYIVNNSNTNLPLHYRLSAVWGSHEGSLLL-WIWLLTLWGAAVAWFSKQLPQEA 62 Query: 126 KLTFFYNVYFILFNISFLSLTLLLIFL----RFDFFFNFTVLEGNELNFLLQDINILIHP 181 V +L + +S+ L+ L FD F ++G ELN LLQD+ ++ HP Sbjct: 63 -------VARVLGIMGIISIGFLIFVLFTSNPFDRTFPDFPVDGKELNPLLQDVGLIFHP 115 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R + W + I+LGS WAY EL Sbjct: 116 PLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYEL 175 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE SL+PW+ ALLHSL + K + ++ L + + + ++G LV Sbjct: 176 GWGGWWFWDPVENASLMPWIAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 235 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF 360 RSG+L SVH F + P + L + +V I +V+ K + S + Y+ + Sbjct: 236 RSGILVSVHAFASDPTRGLYILAYLVVVIGGSLVLYAYKGSQIRSRENA-ERYSRETALL 294 Query: 361 LLVILYFLYLLFVL---YFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGILLT 408 L IL L VL P + K + FF+++ LLL +G L+ Sbjct: 295 LNNILLMSALSVVLLGTLLPLVHKQLGLGTISVGAPFFDQMFLIIMVPFSLLLGVGPLIK 354 Query: 409 ---------------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFT 453 +I+ L+ + L ++ + + + G +A+ F + L ++ Sbjct: 355 WRRDEFSAIRKPVILSLIVMLVAGFALPYLLQDQLTVSAVLG---TMMAV-FIVLLSVYE 410 Query: 454 LILIIKQKFSF-------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN----- 501 L + +F H+ L + + +++G F N+SI + + +N Sbjct: 411 LQQRATHRSAFWSGLTKLSRSHWGMVLAHLGVAM-SVWGIAFSQNYSIERDVRMNVGDSV 469 Query: 502 --DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 ++ F+ + NYL G + N ++ +LF+EKRFY + T Sbjct: 470 QIADYQFTFQGITEANGPNYLG--GKAQVDIRRN----GQVEAILFAEKRFYTVSKMTMT 523 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 ++ I D+Y+ LG+ ++ W R+ + PFI W W GG+F+ Sbjct: 524 EAAIDWGFTRDIYVALGENLGQDAWALRLYYKPFIRWIWFGGVFM 568
ref|NP_244947.1| protein CcmF [Pasteurella multocida subsp. multocida str. Pm70] ref|YP_006240260.1| cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. 3480] ref|ZP_18465815.1| Cytochrome c heme lyase subunitcmF [Pasteurella multocida subsp. gallicida X73] gb|AAK02094.1| CcmF [Pasteurella multocida subsp. multocida str. Pm70] gb|AFI46501.1| cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. 3480] gb|EJZ80151.1| Cytochrome c heme lyase subunitcmF [Pasteurella multocida subsp. gallicida X73] (651 aa) Score: 188 bits (478), Expect: 6.45923e-45 Length: 585, Idn/Pos/Gap = 156/269/66 (26%/45%/11%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ ++V S+ N P Y+L +W ++EGSL L + ++ + +F +L Sbjct: 63 VNDFSVQYIVNNSNTNLPLHYRLSAVWGSHEGSLLL-WIWLLTLWGAAVAWFSKQLPQEA 121 Query: 126 KLTFFYNVYFILFNISFLSLTLLLIFL----RFDFFFNFTVLEGNELNFLLQDINILIHP 181 V +L + +S+ L+ L FD F ++G ELN LLQD+ ++ HP Sbjct: 122 -------VARVLGIMGIISIGFLIFVLFTSNPFDRTFPDFPVDGKELNPLLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R + W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE SL+PW+ ALLHSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENASLMPWIAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF 360 RSG+L SVH F + P + L + +V I +V+ K + S + Y+ + Sbjct: 295 RSGILVSVHAFASDPTRGLYILAYLVVVIGGSLVLYAYKGSQIRSRENA-ERYSRETALL 353 Query: 361 LLVILYFLYLLFVL---YFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGILLT 408 L IL L VL P + K + FF+++ LLL +G L+ Sbjct: 354 LNNILLMSALSVVLLGTLLPLVHKQLGLGTISVGAPFFDQMFLIIMVPFSLLLGVGPLIK 413 Query: 409 ---------------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFT 453 +I+ L+ + L ++ + + + G +A+ F + L ++ Sbjct: 414 WRRDEFSAIRKPVILSLIVMLVAGFALPYLLQDQLTVSAVLG---TMMAV-FIVLLSVYE 469 Query: 454 LILIIKQKFSF-------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN----- 501 L + +F H+ L + + +++G F N+SI + + +N Sbjct: 470 LQQRATHRSAFWSGLTKLSRSHWGMVLAHLGVAM-SVWGIAFSQNYSIERDVRMNVGDSV 528 Query: 502 --DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 ++ F+ + NYL G + N ++ +LF+EKRFY + T Sbjct: 529 QIADYQFTFQGITEANGPNYLG--GKAQVDIRRN----GQVEAILFAEKRFYTVSKMTMT 582 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 ++ I D+Y+ LG+ ++ W R+ + PFI W W GG+F+ Sbjct: 583 EAAIDWGFTRDIYVALGENLGQDAWALRLYYKPFIRWIWFGGVFM 627
ref|ZP_15713804.1| cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. P52VAC] gb|EJS85817.1| cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. P52VAC] (651 aa) Score: 188 bits (478), Expect: 6.67845e-45 Length: 585, Idn/Pos/Gap = 156/269/66 (26%/45%/11%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ ++V S+ N P Y+L +W ++EGSL L + ++ + +F +L Sbjct: 63 VNDFSVQYIVNNSNTNLPLHYRLSAVWGSHEGSLLL-WIWLLTLWGAAVAWFSKQLPQEA 121 Query: 126 KLTFFYNVYFILFNISFLSLTLLLIFL----RFDFFFNFTVLEGNELNFLLQDINILIHP 181 V +L + +S+ L+ L FD F ++G ELN LLQD+ ++ HP Sbjct: 122 -------VARVLGIMGIISIGFLIFVLFTSNPFDRTFPDFPVDGKELNPLLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R + W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE SL+PW+ ALLHSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENASLMPWIAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF 360 RSG+L SVH F + P + L + +V I +V+ K + S + Y+ + Sbjct: 295 RSGILVSVHAFASDPTRGLYILAYLVVVIGGSLVLYAYKGSQIRSRENA-ERYSRETALL 353 Query: 361 LLVILYFLYLLFVL---YFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGILLT 408 L IL L VL P + K + FF+++ LLL +G L+ Sbjct: 354 LNNILLMSALSVVLLGTLLPLVHKQLGLGTISVGAPFFDQMFLIIMVPFSLLLGVGPLIK 413 Query: 409 ---------------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFT 453 +I+ L+ + L ++ + + + G +A+ F + L ++ Sbjct: 414 WRRDEFSAIRKPVILSLIVMLVAGFALPYLLQDQLTVSAVLG---TMMAV-FIVLLSVYE 469 Query: 454 LILIIKQKFSF-------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN----- 501 L + +F H+ L + + +++G F N+SI + + +N Sbjct: 470 LQQRATHRSAFWSGLTKLSRSHWGMVLAHLGVAM-SVWGIAFSQNYSIERDVRMNVGDSA 528 Query: 502 --DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 ++ F+ + NYL G + N ++ +LF+EKRFY + T Sbjct: 529 QIADYQFTFQGITEANGPNYLG--GKAQVDIRRN----GQVEAILFAEKRFYTVSKMTMT 582 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 ++ I D+Y+ LG+ ++ W R+ + PFI W W GG+F+ Sbjct: 583 EAAIDWGFTRDIYVALGENLGQDAWALRLYYKPFIRWIWFGGVFM 627
ref|ZP_09223186.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20652] dbj|GAA59435.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20652] (656 aa) Score: 188 bits (478), Expect: 6.84773e-45 Length: 594, Idn/Pos/Gap = 161/261/82 (27%/43%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L DF++ +V SS P YK+ + W +EG++ L +Q + + L + Sbjct: 62 LTDDFTVSYVAYHSSSTLPWYYKITSTWGGHEGAILLWLVMQ-AGWTAAVAARSKSLPWV 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 ++ + F+ + F+ TLLL F+ + +EG +LN LLQD ++IHPPL+ Sbjct: 121 LRARVLGVLGFL--GVGFMMYTLLLSS-PFERLLPYFPVEGRDLNPLLQDPGMIIHPPLL 177 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y+ Y S+ FS + L+ K R + W + +GS WAY+ELGWG Sbjct: 178 YMGYVGLSVAFSFAIAALLTGKLDNTWAKWSRPWTMTAWGFLGLGLTIGSWWAYSELGWG 237 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE +L+PWL++ ALLHSL + K I + ++ L +A + + ++G +VRSG Sbjct: 238 GWWFWDPVENAALMPWLVATALLHSLSVTEKRGIFKSWTVLLAIAAFSLSLLGTFIVRSG 297 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY----- 358 ++ SVH F P+ + F L F+ +++ L Y S Y FV Sbjct: 298 IIVSVHAFATDPDRGL----FILAFLGVVVGGGLALYAMRVSQVHSEGRYKFVSREVALW 353 Query: 359 ---IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGIL 406 IFL+V + L +L P + K ++ FFNK+ +L+ IG L Sbjct: 354 LNNIFLVVATLIVMLGTLL--PMVHKEMGLGSISIGEPFFNKMFAIILVPFAILMGIGPL 411 Query: 407 LTLIIIFLINSW-----KLIFIFLGIIIIGGIRGF-------PEIFLALYFFIYLLLFTL 454 L + N W K++ L ++I F P LA +++ + T Sbjct: 412 LR----WKQNKWAFLQNKILMGVLASVVITCAWLFSSYDLVKPLTLLATTLAVWIAISTG 467 Query: 455 ILIIKQK-----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 I I + ++ ++ H FI+ + L + Y E ++ G+T Sbjct: 468 IDIYTKAAVHGTLKEGLKRFTVSYWAMVLGHIGIAFIIAGVTLTSAYSVERDVSMKPGET 527 Query: 498 LLLNDNFIIIFRDLNHIWSTNYLSTYG-------NFLITDFHNPMCYENIQNVLFSEKRF 550 LN+ + F + I NY G N L+T H +EKR Sbjct: 528 AQLNE-YEYRFDGVKTIRGPNYSGHAGVVSVLKNNELVTRLH-------------AEKRK 573 Query: 551 YLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 Y T++ I D+Y+ LG+ + W RI PF+ W W+GG+ + Sbjct: 574 YDIGMQFMTEAAIDAGFKRDLYLALGEQLSGDAWSLRIYHKPFVRWIWIGGVLM 627
ref|ZP_11141761.1| cytochrome c biogenesis factor [Idiomarina xiamenensis 10-D-4] gb|EKE80806.1| cytochrome c biogenesis factor [Idiomarina xiamenensis 10-D-4] (654 aa) Score: 188 bits (478), Expect: 7.0213e-45 Length: 599, Idn/Pos/Gap = 156/272/76 (26%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFIN--KLT 122 +++DFSI +V S+ P +Y++ +W ++EGS L F+Q + + F L+ Sbjct: 62 VVNDFSIAYVAANSNSQTPLIYRITAVWGSHEGSFLLWMFMQ-ASWIAAVARFSRSMPLS 120 Query: 123 LIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPP 182 +I ++ + I F + LS++ FD F ++G +LN LLQD ++IHPP Sbjct: 121 MITRVLVVLGLVSIGFYLFMLSVSNP-----FDRSLPFIPVDGGDLNPLLQDPGMIIHPP 175 Query: 183 LIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTEL 240 ++Y+ Y +S+ F+ + L + + R L W + I LGS WAY EL Sbjct: 176 MLYMGYVGFSVAFAFAIAALW-SGQLDAAWARWSRPWTLAAWLFLTVGIALGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL+ AL+HSL + K + ++ L +A + + ++G LV Sbjct: 235 GWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGSFKSWTVLLAIAAFALSLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYN-FVYYI 359 RSG+L SVH F P + F L + ++I L Y + Y F + Sbjct: 295 RSGVLVSVHAFATDPARGL----FILALLAVVIGGSLALYALRAGKVSRSGRYQGFSREV 350 Query: 360 FL-----LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 L L++ +L P + K ++ FFN++ LL+ +G Sbjct: 351 MLLGNNILLMAATAVVLLGTLLPLVHKELGLGSISIGEPFFNRLFTWLVVPFALLVGVGP 410 Query: 406 LLT---------------LIIIFLINSWKLIFIFLG----IIIIGGIRGFPEIFLALYFF 446 L+ +++ L +W L I+ G ++++G +FLA + Sbjct: 411 LVRWRRQEFKAIRQPLALALLLALALAWGLPAIWAGQVPTMVVLG-------LFLAFWVL 463 Query: 447 IYLLLFTLILIIKQKFS-------------FIVYHFNFFFIMLSLLLITIYGEEFILNFS 493 I L + +++ S ++ H F ++ ++L++ Y E + + Sbjct: 464 IATLAEIRQSLAQRQLSAAHLTRLGRSHWGMVLGHVGFAVSLIGIVLVSHYEIERDVALA 523 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 G+ + + + F L H N+ + +G F + F N + + L SEKRFY Sbjct: 524 PGQAAEIA-GYQVRFDRLAHYDGPNFDTEHGEFSV--FKN----GELVSELVSEKRFYRV 576 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 Q T+ + T+L+ D+Y+ L + + W RI PF+ W WLG + + + +L Sbjct: 577 QRTSMTEVGLQTSLLRDLYVALAEPIDDQRWALRIYVKPFVRWIWLGALIMAAGALLAL 635
ref|YP_004158656.1| cytochrome C-type biogenesis protein [Bartonella clarridgeiae 73] emb|CBI76070.1| cytochrome C-type biogenesis protein [Bartonella clarridgeiae 73] (657 aa) Score: 188 bits (477), Expect: 7.25959e-45 Length: 602, Idn/Pos/Gap = 177/283/81 (29%/47%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGS-----LFLGYFLQFIIYFTFINYFIN 119 ++SDFS+L VVE S +P LYK++ +W N+EGS L LG+F I F+ Sbjct: 58 IVSDFSVLNVVENSHSEKPMLYKIVGVWGNHEGSMLLWVLLLGFFSILIALFS--QQLPE 115 Query: 120 KL-TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINIL 178 + L++ + F+LF I F+S + + N VL+G +LN +LQDI+++ Sbjct: 116 QFKALVLGCQSWITSAFLLF-ILFISNPFIRV--------NPPVLQGKDLNPVLQDISLV 166 Query: 179 IHPPLIYISYASYSIIFSISFTILIIKCKFYV-LYILRFLNLIGWFIASFSILLGSRWAY 237 IHPPL+Y+ Y +++ FS S LII V Y +R L+ W + I++GS WAY Sbjct: 167 IHPPLLYLGYVGFAVCFSFSIAALIIGYVDKVWAYWIRPWVLLAWIFLTVGIMVGSYWAY 226 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE +SL+PWL ALLHS+++ K +++ +LFL + + + ++G Sbjct: 227 YELGWGGYWFWDPVENVSLMPWLSGTALLHSVIIFEKRNLLKSWTLFLAIITFSLSLMGT 286 Query: 298 ILVRSGLLQSVHTFVNSP---NFLIIFLYFF---LVFIFILIVILLKKYTYFTSIFD--- 348 LVRSG+L S+H+F P ++ L+FF + +F + + +LKK +F I Sbjct: 287 FLVRSGILMSIHSFAVDPARGKAILAILFFFTGGALLLFAIRMPILKKRGFFHPISREGF 346 Query: 349 --LNN----------------------------HYNFVYYIFLLVILYFLYLLFVLYFPF 378 LNN V++ L + LLFV + P Sbjct: 347 IILNNLFLTTATATVLIGTLYPYFFEALTGQKISVGPVFFNLTFGPLMMILLLFVPFGPM 406 Query: 379 LIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWKLIFIFLGI-----IIIGGI 433 + D F F ++ +F + I F ++S + IF LG+ + +GG+ Sbjct: 407 IAWKRGD-----FFAVFERLWCVFALACIACFITFYLDSLRDIFAALGVGLAVFVFLGGL 461 Query: 434 R---GFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFIL 490 G + F L L + F + H + ++ + +G+E IL Sbjct: 462 ADLWGKSGYHKVPFLVRAKRFFRLPLSV---FGAALAHMGLGVTLFGIICVATFGQERIL 518 Query: 491 NFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRF 550 I T+ + I F ++ +I +NY + F I + N I N++ S KRF Sbjct: 519 IMQIRDTVTIAGK-TICFDEVRNIAGSNYSAIQFGFKIYEDKN-----LISNIIAS-KRF 571 Query: 551 YLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIF 610 Y Q++ T+ I ++ S YI G N + G I + P++ W G + F Sbjct: 572 YSSQNISTTEVGIQSHGFSQFYIAPGRIN-DQGLVVHIWWKPYVICIWFGAFMMAVGGGF 630 Query: 611 SL 612 SL Sbjct: 631 SL 632
ref|YP_001609123.1| cytochrome C-type biogenesis protein [Bartonella tribocorum CIP 105476] emb|CAK01128.1| cytochrome C-type biogenesis protein [Bartonella tribocorum CIP 105476] (666 aa) Score: 188 bits (477), Expect: 7.63227e-45 Length: 606, Idn/Pos/Gap = 175/285/91 (28%/47%/15%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL---- 121 +SDFS+L V+E S +P LYK+ +W N+EGS+ L + L + + +F L Sbjct: 70 VSDFSVLNVIENSHSEKPMLYKITGIWGNHEGSMLL-WVLCLTFFSALMAFFSQDLPEDF 128 Query: 122 -TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIH 180 TLI+ + F+LF I F+S L ++ L+GN+LN LLQDI + IH Sbjct: 129 KTLILICQSWITSAFLLF-ILFVSNPFLRVYP--------PALQGNDLNPLLQDIALAIH 179 Query: 181 PPLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 PPL+Y+ Y +S+ FS + LII K + ++ +L L+ W + I++GS WAY Sbjct: 180 PPLLYLGYVGFSLCFSFAIAALIIGHIDKIWARWVRPWL-LLSWCFLTLGIMVGSYWAYY 238 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE +S +PWL ALLHS L+ K I++ +LFL + + ++G Sbjct: 239 ELGWGGYWFWDPVENVSFMPWLSGTALLHSALVLEKRGILKSWTLFLALLTFSFSLMGTF 298 Query: 299 LVRSGLLQSVHTFVNSP---NFLIIFLYFFLVFIFILIVI---LLKKYTYFTSIFDLNNH 352 LVRSGLL SVH+F P ++ L+FF F+L + LL+ ++F I + Sbjct: 299 LVRSGLLVSVHSFAVDPARGQAILAILFFFTGAAFLLFALRIPLLRTESFFQPI----SR 354 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN---------------- 396 F+ LL+ +L +P+ I+ + FFN Sbjct: 355 EGFIVLNNLLLTTTTATVLIGTLYPYFIEMLTGQKISVGAAFFNLTCGPLMLLLLFLVPF 414 Query: 397 ----------------KILLLFIGILLTLIIIFLINSWKLIFIFLGI-----IIIG---- 431 ++ +F+ + I+F S + I LGI + +G Sbjct: 415 GPMMAWKRGDFFAVFERLWFVFVLVATVCFILFYATSLRDILAVLGIGLSAFVFLGSLAD 474 Query: 432 --GIRGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFI 489 G G+ + ++ +L L + F + H + ++ + +G+E I Sbjct: 475 LWGKSGYGKKAFSVRVKRFLGLPWSV------FGAAMAHMGLGVTLFGIVCVASFGQERI 528 Query: 490 LNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFSE 547 L +IG+ + + D + F +++ + +NY + F I YEN + V + + Sbjct: 529 LTMNIGEWVTIADK-TLHFDTVHNRFGSNYSAMEFRFKI--------YENKKIVGHVTAS 579 Query: 548 KRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFEN-GWYSRILFMPFISWFWLGGIFLLD 606 KRFY Q+ T+ + + +S +YI+ G+F+N G I + P+I WLG + Sbjct: 580 KRFYASQNTSTTEVGLQNHGLSQLYIV--PGHFDNRGLVVHIWWKPYIICIWLGAFMMAM 637 Query: 607 SIIFSL 612 FSL Sbjct: 638 GGCFSL 643
ref|ZP_09390358.1| cytochrome c-type biogenesis protein CcmF [Yokenella regensburgei ATCC 43003] gb|EHM45860.1| cytochrome c-type biogenesis protein CcmF [Yokenella regensburgei ATCC 43003] (651 aa) Score: 188 bits (477), Expect: 7.95742e-45 Length: 650, Idn/Pos/Gap = 162/292/69 (24%/44%/10%) Query: 1 MFGYVLHFLLIFIFIYSCNFFFLDSFYKYKKVTTLLEIVHH-YYFYFNYIYNIIIIIIWL 59 M + HFLL SC ++ + ++ + F I+ +I+++ Sbjct: 1 MIPEIGHFLLCLALGISCLLGLYPAWGAMRDDRRMMALAKPLACAMFAAIFGSFLILVY- 59 Query: 60 IGIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFIN 119 +++DF++ +VV S+ P Y++ W +EGSL L +++ + + + Sbjct: 60 ---AFVVNDFTVQYVVSNSNTLLPVWYRVAATWGAHEGSLLL-----WVLLMSGWTFAVA 111 Query: 120 KLTLIVKLTFFYNVYFILFNISFLSLTLLLI----FLRF--DFFFNFTVLEGNELNFLLQ 173 L+ + L V ++ ISF L +L+ F+R DF +EG +LN +LQ Sbjct: 112 ALSRNIPLEASSRVLAVMGMISFCFLAFILLTSNPFVRTLPDF-----PIEGRDLNPMLQ 166 Query: 174 DINILIHPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLG 232 DI ++ HPP++Y+ Y +S+ F+ + L+ + R L W + I+LG Sbjct: 167 DIGLIFHPPMLYMGYVGFSVAFAFAIASLMTGRLDSAWARWSRPWTLAAWSFLTVGIVLG 226 Query: 233 SRWAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFV 292 S WAY ELGWGG+WFWD VE SL+PWL AL+HSL + K + ++ L + + + Sbjct: 227 SAWAYYELGWGGWWFWDPVENASLMPWLAGTALIHSLSVTEKRGSFKSWTVLLAILAFSL 286 Query: 293 IIIGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFI-FILIVILLKKYTYFTSI-FDLN 350 ++G LVRSG+L SVH+F + P + L ++ I L++ LK + + +L Sbjct: 287 CLLGTFLVRSGVLISVHSFASDPTRGMFILALLVITIGGSLLLFALKGGKVRSRVQHELW 346 Query: 351 NHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLL 401 + + + +L++ L +L P + K ++ FFN + LLL Sbjct: 347 SRESLLLGNNILLVAAMLVVLLGTLLPLVHKLLGLGSISIGEPFFNSMFIALMIPFALLL 406 Query: 402 FIGILLTLIIIFLINSWKLIFIFLGIIII----------GGIRGFPEIFLALYFFIYLLL 451 IG L+ K + I G+ ++ I+ L L ++ L+ Sbjct: 407 GIGPLVRWRRDEFHKLRKRLLIAAGVSVVLAVVLPWLLQDSIKAM--TVLGLLMSLWALV 464 Query: 452 FTLILIIKQKFSFIVY----------HFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN 501 T++ ++++ + H+ + L++T+ G F N+SI + + + Sbjct: 465 LTVMEVVERATDRHTFWRGLTRLGRSHWGMVAGHVG-LVVTVIGIAFSQNYSIERDVRMK 523 Query: 502 DNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQ 554 + IFRD++ I NY+ G +T + + L +EKR Y+ Sbjct: 524 PGDSVDIHQYHFIFRDVHDITGPNYMGGAGIIEVTKAGKHV------STLRAEKRIYMSS 577 Query: 555 SLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y LG+ + W R+ + PF+ W W GG+ + Sbjct: 578 RMEMTEAAIDGGLARDLYAALGEELDDGSWAVRLYYKPFVRWIWFGGMLM 627
ref|YP_004146346.1| cytochrome C biogenesis protein CcmF [Pseudoxanthomonas suwonensis 11-1] gb|ADV27115.1| cytochrome c-type biogenesis protein CcmF [Pseudoxanthomonas suwonensis 11-1] (640 aa) Score: 188 bits (477), Expect: 8.02409e-45 Length: 572, Idn/Pos/Gap = 144/251/50 (25%/43%/8%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 DFS+ +V S+ P +Y+ +W ++EGSL L +++ N + L+ + Sbjct: 64 QDFSVRYVATNSNSLLPMVYRYTAVWGSHEGSLLL-----WVLVLCVWNALMAALSTHLP 118 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDF-FFNFTVLEGNELNFLLQDINILIHPPLIY 185 T V L I L+F F +EG +LN LLQD ++IHPP+ Y Sbjct: 119 QTVVARVLGTL-GIVACGFLAFLVFTSNPFERLLPAAMEGRDLNPLLQDPGMIIHPPMQY 177 Query: 186 ISYASYSIIFSISFTILI---IKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGW 242 + +A +SI F+ + L+ I ++ L +R + W + I LGS WAY ELGW Sbjct: 178 VGWAGFSIPFAFAIAALLDGRIDARW--LRWVRPWTNVAWAFLTVGIALGSWWAYYELGW 235 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GG+WFWD VE + +PWL+ AL+HS + K +L L +A + + ++G LVRS Sbjct: 236 GGWWFWDPVENAAFMPWLVGAALIHSQAVTEKRGSFAGWTLLLAIAAFSLSLMGTFLVRS 295 Query: 303 GLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYI 359 G+L SVH F P+ F++IFL + +L + + ++ + Sbjct: 296 GVLTSVHAFAADPSRGLFILIFLGLVIGGSLLLYALRAGRLEAGAGFQPVSRETLLLLNN 355 Query: 360 FLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWK 419 LL + LL LY P L + + +F + + I LL L+ + + W+ Sbjct: 356 LLLASACAMILLGTLY-PLLADALDLGKISVGPPYFGLLFFVLIAPLLALVPLGPLARWQ 414 Query: 420 ---------LIFIFLGIIIIGGIRGF---PE--------------IFLALYFFIYLLLFT 453 + +LG+ ++ G+ + P+ + L F + L Sbjct: 415 REQPSKLAAALLPWLGMALVAGVAAYFTAPQGAWKTAVGVAGAAWVGLGTLHFAWARLRN 474 Query: 454 LILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFIIIFRDLNH 513 + + + ++ H ++ LL+ + + G+ L + + F+ ++ Sbjct: 475 SGRLTAEMWGMVLAHLGLAVFVVGALLVEAQNVQREVALKPGQRLEVG-RYAFEFQGVDQ 533 Query: 514 IWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSIIYTNLMSDVYI 573 + NYL+ G+ + P+ +L EKR Y + T++ I + +DVY+ Sbjct: 534 LQGPNYLADRGHVQVLRDERPLV------LLHPEKRAYASGGQVMTEAGIRPGVTADVYV 587 Query: 574 LLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 LG+ + W R+ PF+ W W GG L+ Sbjct: 588 ALGESLGDGAWAVRVHIKPFVRWIW-GGAALM 618
ref|ZP_01101200.1| cytochrome C-type biogenesis protein CcmF [Congregibacter litoralis KT71] gb|EAQ99301.1| cytochrome C-type biogenesis protein CcmF [Congregibacter litoralis KT71] (660 aa) Score: 188 bits (477), Expect: 8.02409e-45 Length: 590, Idn/Pos/Gap = 155/260/63 (26%/44%/10%) Query: 60 IGIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFIN 119 + I L DFS+ V S+ P +YK +W N+EGSL L + L + + F Sbjct: 57 LAIAFLQDDFSVKVVASNSNSLLPPIYKFSAVWGNHEGSLLL-WVLILSFWLAAVATFSR 115 Query: 120 KLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 L ++ + FI + F S +L F+ +GN+LN LLQD ++I Sbjct: 116 GLPTVMLARVLAVMGFI--GVGFTSFSLFTSNP-FERLLPGVPADGNDLNPLLQDPGLII 172 Query: 180 HPPLIYISYASYSIIFSISFTILIIKC--KFYVLYILRFLNLIGWFIASFSILLGSRWAY 237 HPPL+Y+ Y +S+ F+ + L+ + + + N + W S I+LGS WAY Sbjct: 173 HPPLLYMGYVGFSVAFAFAVAALMGGRLDAAWARWSRPWTN-VAWAFLSLGIMLGSWWAY 231 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE S +PWL AL+HSL K + + ++ L + + + ++G Sbjct: 232 YELGWGGWWFWDPVENASFMPWLAGTALIHSLAATEKRGLFKSWTVLLAIFAFSLSLLGT 291 Query: 298 ILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVY 357 LVRSG+L SVH F P + F LVF+ I++ L Y + V Sbjct: 292 FLVRSGVLTSVHAFAADPERGL----FILVFLGIVVGGSLTLYAMRAPSVRSRIGFGTVS 347 Query: 358 YIFLLVI------LYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 LL++ + L +LF FP L+ +FN + + + L+ + Sbjct: 348 RESLLLVNNVVFLVATLTVLFGTLFPLLMDALGQGKYSVGAPYFNAVFVPLMACLVPFMG 407 Query: 412 IFLINSWKLIFIFL--------GIIIIGGIRGFP-------EIFLALYFFIYL-LLFTLI 455 I I+ W+ ++ +++G G P +++AL + LL L+ Sbjct: 408 IGPISKWRDDSVYRWRSRMLLPAAVVLGVGLGLPLISDQGYNLWVALALVMAGWLLAGLV 467 Query: 456 LIIKQK------------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 +++ + ++ H F ++ ++ + Y E L + G T Sbjct: 468 QDFRERSRNSPSLLRGFRRQSPSYWGMVMAHCGFAMAIIGVVATSQYNIERDLRMAPGDT 527 Query: 498 LLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFSEKRFYLYQS 555 L + F++ + NYL+ F + Y + V L +EKR YL Sbjct: 528 ETLA-GYRFEFKETVRLRGANYLADGARFEV--------YRGERRVTTLLAEKRRYLASG 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ +G+ + G W R+ + P + W W+G IF+ Sbjct: 579 SVMTEAAIDGGLFRDLYVAMGEPVGDGGAWAIRLHYKPMVRWMWIGAIFM 628
ref|YP_002383402.1| heme lyase, CcmF subunit [Escherichia fergusonii ATCC 35469] ref|ZP_18242139.1| heme lyase, CcmF subunit [Escherichia fergusonii ECD227] emb|CAQ89787.1| heme lyase, CcmF subunit [Escherichia fergusonii ATCC 35469] gb|EGC95867.1| heme lyase, CcmF subunit [Escherichia fergusonii ECD227] (647 aa) Score: 188 bits (477), Expect: 8.5067e-45 Length: 587, Idn/Pos/Gap = 154/262/75 (26%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVCVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT------------LIIIF-------LINSWKLIFIFLGIIIIGGIRGFPEIFLALYF 445 L+ LII F LI W + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLIVPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_10281301.1| cytochrome C biogenesis protein ccmF [Pseudoalteromonas arctica A 37-1-2] (656 aa) Score: 187 bits (476), Expect: 9.96806e-45 Length: 586, Idn/Pos/Gap = 157/260/70 (26%/44%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 DF++ +V SS P YK+ + W +EG++ L +Q + + L +++ Sbjct: 64 DDFTVSYVAYHSSSTLPWYYKITSTWGGHEGAILLWLVMQ-AGWTAVVAARSKSLPWVLR 122 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLIYI 186 + F+ + F+ TLLL F+ + +EG +LN LLQD ++IHPPL+Y+ Sbjct: 123 ARVLGVLGFL--GVGFMMYTLLLSS-PFERLLPYFPVEGRDLNPLLQDPGMIIHPPLLYM 179 Query: 187 SYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWGGF 245 Y S+ FS + L+ K R + W + I +GS WAY+ELGWGG+ Sbjct: 180 GYVGLSVAFSFAIAALLTGKLDNTWAKWSRPWTMTAWGFLTLGITIGSWWAYSELGWGGW 239 Query: 246 WFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSGLL 305 WFWD VE SL+PWL++ ALLHSL + K + + ++ L +A + + ++G +VRSG++ Sbjct: 240 WFWDPVENASLMPWLVATALLHSLSVTEKRGVFKSWTVLLAIAAFSLSLLGTFIVRSGII 299 Query: 306 QSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL--- 362 SVH F P+ + F L F+ I++ L Y S Y FV L Sbjct: 300 VSVHAFATDPDRGL----FILAFLGIVVGGGLALYALRVSQVHSEGRYKFVSREVALWLN 355 Query: 363 ---VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILLLFIGILLTLI--IIFL 414 +++ L +L P + K ++ FFNK I+L+ IL+ + + + Sbjct: 356 NIFLVVATLIVLLGTLLPMVHKEMGLGSISIGEPFFNKMFAIILVPFAILMGIGPFLRWK 415 Query: 415 INSW-----KLIFIFLGIIIIGGIRGF-------PEIFLALYFFIYLLLFTLILIIKQK- 461 N W K++ L ++I F P LA +++ + T I I + Sbjct: 416 QNKWAFLQNKILMGVLASVVITCAWLFSSYDLVKPLTLLATTLAVWIAISTGIDIYTKSA 475 Query: 462 ----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 ++ ++ H F++ + L + Y E ++ G T+ LN+ + Sbjct: 476 VHGTLKEGLKRLGVSYWAMVLGHIGISFVIAGVTLTSAYSVERDVSMKQGDTVQLNE-YE 534 Query: 506 IIFRDLNHIWSTNYLSTYG-------NFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 F + I NY G N L+T H +EKR Y Sbjct: 535 YRFDGVKTIRGPNYSGHAGVVSVLKNNELVTRLH-------------AEKRKYDIGMQFM 581 Query: 559 TKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I D+Y+ LG+ + W RI PF+ W W+GG+ + Sbjct: 582 TEAAIDAGFTRDLYLALGEQLSQGAWSLRIYHKPFVRWMWIGGVLI 627
ref|ZP_02000394.1| Cytochrome c assembly protein [Beggiatoa sp. PS] gb|EDN69605.1| Cytochrome c assembly protein [Beggiatoa sp. PS] (645 aa) Score: 187 bits (476), Expect: 9.96806e-45 Length: 576, Idn/Pos/Gap = 156/252/66 (27%/43%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL----- 121 +DFS+L+V S+ P +Y+ +++W +EGS+ L + L + + F L Sbjct: 53 NDFSVLYVANHSNSALPLIYRYVSVWGGHEGSMLL-WILILSFWTVAVAIFSRSLPTAMV 111 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + F +V F+LF +LL F+ F G +LN LLQD ++IHP Sbjct: 112 ARVIAVMGFISVGFLLF--------VLLTSSPFERIFPAPA-NGGDLNPLLQDPGLIIHP 162 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 P++Y+ Y +S+ FS + L+ K R L+ W + I+LGS WAY EL Sbjct: 163 PMLYMGYVGFSVAFSFAIAALLGGKLDSAWARWSRPWTLVAWIFLTLGIVLGSWWAYYEL 222 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL+ AL+HSL + K + ++ L + + + ++G LV Sbjct: 223 GWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRAAFKNWTVLLAIMAFSLSLLGTFLV 282 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF 360 RSG+L SVH F P I F L F+ +++ I L Y + H+ + Sbjct: 283 RSGVLTSVHAFATDPERGI----FILAFLGVIVGISLLLYAWRAPSVGNGGHFELMSRET 338 Query: 361 LL-------VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIF 413 LL V+ LL LY P I L +F+ + + + L+ I Sbjct: 339 LLLLNNILFVVACGGVLLGTLY-PLFIDALGMGKLSVGPPYFDVVFFWIMAPTMFLLGIG 397 Query: 414 LINSWK---------------LIFIFLGII---IIGGIRG---FPEIFLALYFFIYLLLF 452 ++ WK +I I LG++ ++ G G FP I A++ + + Sbjct: 398 PLSRWKSEQAKNLVIRLRYLFIISIVLGLLLPFMVMGKAGLIVFPGIAAAVWIILTSVQN 457 Query: 453 TLILIIKQK---------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDN 503 + ++K + H ++ + L + E + + K L L Sbjct: 458 VREKVAQRKGWTKLPRSFYGMTTAHIGVAVFVVGVTLSNAFSIEKDVRMDLHKPLELAAG 517 Query: 504 FIIIFRDLNHIWSTNYLSTYG-NFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + IF + NY + G ++ D M L EKR YL Q + T++ Sbjct: 518 YSFIFEGTQPLNGPNYQADQGIVRVLKDGKEVMS-------LHPEKRIYLVQRMPMTEAA 570 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFW 598 I D+YI LG+ + W R+ + PFI W W Sbjct: 571 IDWGFTRDIYIALGEPLSDGAWSVRVYYKPFIRWIW 606
ref|ZP_09692583.1| c-type cytochrome biogenesis protein CcmF [gamma proteobacterium HIMB55] gb|EHQ57460.1| c-type cytochrome biogenesis protein CcmF [gamma proteobacterium HIMB55] (657 aa) Score: 187 bits (476), Expect: 1.00516e-44 Length: 603, Idn/Pos/Gap = 154/257/73 (25%/42%/12%) Query: 62 IILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN 115 ++ L DFS+ V S+ P +YK +W N+EGSL L + L + + Sbjct: 59 VVFLQDDFSVKVVASNSNSLLPQIYKFSAVWGNHEGSLLLWVWILGAWALAVAVASRGLP 118 Query: 116 YFINKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDI 175 + L ++ + V FI F++ F S F+ EGN+LN LLQD Sbjct: 119 LVV--LARVLSVLGLIAVGFIAFSL-FTSNP-------FERLLPGVAAEGNDLNPLLQDP 168 Query: 176 NILIHPPLIYISYASYSIIFSISFTILIIKC--KFYVLYILRFLNLIGWFIASFSILLGS 233 ++IHPPL+Y+ Y ++ F+ + L+ + + + N + W + I+LGS Sbjct: 169 GLIIHPPLLYMGYVGLAVPFAFAVAALMGGRLDAAWAKWSRPWTN-VAWAFLTLGIMLGS 227 Query: 234 RWAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVI 293 WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + K + R ++ L ++ + + Sbjct: 228 WWAYYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGLFRSWTVLLAISAFSLS 287 Query: 294 IIGIILVRSGLLQSVHTFVNSPNF-LIIFLYFFLVFIFILIVILLKKYTYFTSI-FDLNN 351 ++G LVRSG+L SVH F P L I ++ LV L + + T + I + L + Sbjct: 288 LLGTFLVRSGVLTSVHAFAADPERGLFILVFLVLVVGGSLTLYAFRAPTVASPINYRLES 347 Query: 352 HYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 + + L+ + + +L FP L+ +FN + + + +L + Sbjct: 348 RESLLLANNLIFAVSAIVVLLGTLFPLLMDALGQGKYSVGPPYFNAVFVPAMALLAPFMA 407 Query: 412 IFLINSWK--------------------------------------LIFIFLGIIIIGGI 433 I I+ WK L + G ++IG + Sbjct: 408 IGPISRWKSDSSKRWLSELMLPGAVCLAVAIVAPYLGVGEVNVWASLAVLLAGWLVIGLV 467 Query: 434 RGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFS 493 R F + + + + + + H F ++ + +T + E L Sbjct: 468 RDFQQRMRGVSSATAV----MARLTPSYLGMLSAHAGFALTIVGAVFVTQFSAERDLRME 523 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQ-NVLFSEKRFYL 552 G T+ LN + +L + NY + G F +T Y+ + L EKR Y+ Sbjct: 524 AGDTVELN-GYTFELTELVVVEGPNYAADRGVFAVT-------YDGESLSSLMPEKRRYV 575 Query: 553 YQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL-LDSIIFS 611 I T++ I M D+YI LG+ + W R+ P I W W G + + L + + Sbjct: 576 ASGQIMTEAAIDAGAMRDLYIALGEPLGDGAWSVRVQHKPLIRWIWFGALMIGLGGLTTA 635 Query: 612 LFR 614 L R Sbjct: 636 LDR 638
ref|YP_756889.1| cytochrome c assembly protein [Maricaulis maris MCS10] gb|ABI65951.1| cytochrome c assembly protein [Maricaulis maris MCS10] (659 aa) Score: 187 bits (476), Expect: 1.02207e-44 Length: 585, Idn/Pos/Gap = 152/252/66 (25%/43%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL-TLIV 125 SDF+ L V E S ++P LYK+ +W N+EGS+ L + L Y + + + ++ Sbjct: 64 SDFTALVVAENSHTDKPMLYKITGVWGNHEGSMLL-WGLILTGYTAALAWSAKPVEARLI 122 Query: 126 KLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLE-GNELNFLLQDINILIHPPLI 184 LTF L +F T L+F F + E G +LN LLQD + HPP++ Sbjct: 123 SLTFAVQS---LITAAF---TAFLLFTSNPFARLWPGPENGQDLNPLLQDPGLASHPPML 176 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y Y +SI FS + LI + I+R L W + I LG+ WAY ELGWG Sbjct: 177 YAGYVGFSITFSFAVAALIDGRVDARWARIVRPWALTAWTFLTIGIALGASWAYYELGWG 236 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+W WD VE SL+PWL A +HSL + K ++ ++ L + + + + G LVRSG Sbjct: 237 GWWAWDPVENASLMPWLAGTAFIHSLRVMEKRDTLKAWTILLALMTFALSMAGTFLVRSG 296 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIF--ILIVILLKKYTYFTSIFDLNNHYNFVYYIFL 361 ++ SVH F P + L + I +LI L T +F + + + L Sbjct: 297 IITSVHAFAVDPERGVFILAILVALIGGSLLIYGLRAGLLKPTGVFSAVSRESLLLINNL 356 Query: 362 LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWK-- 419 ++ + F ++P I ++ + F+N +G LL L+ I + +WK Sbjct: 357 VLAAACGLVFFGTFYPLFITTVSNETVTVGAPFYNNTFNPMLGALLVLVPISGLLAWKRG 416 Query: 420 ------------------------------LIFIFLGI-----IIIGGIRGFPEIFLALY 444 LI LG + +G + I LA Sbjct: 417 KLMPVLRDLAPAAIAAIAGGVAALWIADRGLIAGALGTALAVWVAVGVV-----IDLAKR 471 Query: 445 FFIYLLLFTLILIIKQK-----FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLL 499 F + + F L + + V HF ++ ++ ++ + +E G+ L Sbjct: 472 FKLGEIAFAASLARMARLPLGIWGMAVAHFGLAVVVFAITGVSAWKQETSAFLMPGQHLD 531 Query: 500 LNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 + I + R + + NY++ G +T + + + + L +E+R Y + + T Sbjct: 532 IRQLTITLDR-VEQVEGRNYVAERG--YLTARRD----QQVVSQLTAERRLYPVRGMSTT 584 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 +S I+ D+Y+ +G + E+GW + PF W W+G L Sbjct: 585 ESAIHARATGDLYVTIGQPSPEHGWPVHVYLYPFAMWLWIGSAVL 629
ref|YP_004211949.1| cytochrome c-type biogenesis protein CcmF [Rahnella sp. Y9602] ref|YP_005400963.1| cytochrome c-type biogenesis protein CcmF [Rahnella aquatilis HX2] gb|ADW72822.1| cytochrome c-type biogenesis protein CcmF [Rahnella sp. Y9602] gb|AFE57396.1| cytochrome c-type biogenesis protein CcmF [Rahnella aquatilis HX2] (657 aa) Score: 187 bits (476), Expect: 1.14872e-44 Length: 612, Idn/Pos/Gap = 159/274/82 (25%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DF++ +V S+ + P Y++ W +EGS +++ ++ + + L Sbjct: 62 VVNDFTVAYVANNSNTHLPVYYRVAATWGAHEGS--------LLLWVLLLSCWTLAVALF 113 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL-IFLRFDFFF----NFTVLEGNELNFLLQDINILI 179 + V +L + ++ LL I L + F NF V +G++LN +LQDI ++ Sbjct: 114 SRRMPQDAVSRVLAVMGMITGGFLLFILLTSNPFIRSLPNFPV-DGSDLNPVLQDIGLIF 172 Query: 180 HPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 HPPL+Y+ Y +S+ F+ + L+ + R W + I+LGS WAY Sbjct: 173 HPPLLYMGYVGFSVAFAFAIASLMAGRLDTAWARWSRPWTQAAWVFLTIGIVLGSAWAYY 232 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G Sbjct: 233 ELGWGGWWFWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLLGTF 292 Query: 299 LVRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYT-YFTSIFDLNNHYNFV 356 LVRSG+L SVH+F + P + I Y +V L++ K + S +L++ +++ Sbjct: 293 LVRSGVLVSVHSFASDPARGMFILAYLVIVIGGSLLLYAFKGNSVRAPSRHELHSRESYL 352 Query: 357 YYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGIL- 406 +L++ L +L P + K ++ FFN + LLL IG L Sbjct: 353 LGNNVLLVAAMLVVLLGTLLPLIHKQLGLGSISIGEPFFNTMFTWLMAPLALLLGIGPLV 412 Query: 407 ---------------LTLIIIFLIN---SWKLIFIFLGIIIIGGIRGFPEIFLALYFFIY 448 + L++ +++ W L +G+ ++G L + I Sbjct: 413 RWRRDEPSKLWRRLGVALVVTLVLSILLPWLLQDKIVGMTVVG--------MLMSVWVIV 464 Query: 449 LLLFTLILIIKQKFSF-------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN 501 L L L + SF H+ L + +T+ G F N+S+ + + + Sbjct: 465 LTLMELHERATHRHSFWRGLTKLSRSHWGMVLGHLG-VAVTVIGIAFSQNYSVERDVRMK 523 Query: 502 DNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFSEKRFYL 552 + IFRD+ I NY N +T +N + V L +EKRFY Sbjct: 524 SGDTVDIHDYHFIFRDVRDITGPNYTGGEANIDVT--------QNGKQVTTLHAEKRFYS 575 Query: 553 YQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDS----I 608 + T++ I NL D+Y LG+ + W R+ + PF+ W WLGG+F+ I Sbjct: 576 VARSMMTEAAIDGNLARDLYAALGEEMDDGSWAVRLYYKPFVRWIWLGGLFMAAGGVLCI 635 Query: 609 IFSLFRCIKNFQ 620 + +R K + Sbjct: 636 LDPRYRMSKKLK 647
ref|YP_004513246.1| cytochrome c-type biogenesis protein CcmF [Methylomonas methanica MC09] gb|AEG00747.1| cytochrome c-type biogenesis protein CcmF [Methylomonas methanica MC09] (649 aa) Score: 187 bits (476), Expect: 1.20769e-44 Length: 581, Idn/Pos/Gap = 150/259/65 (25%/44%/11%) Query: 68 DFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVKL 127 DFS+ ++ + S+ P +Y + +W +EGSL L + L I+ + F + + Sbjct: 65 DFSVAYIAQNSNTGLPFIYLVSGVWGAHEGSLLL-WALTLSIWTGLVAMFSKHIPDATRA 123 Query: 128 TFF-----YNVYFILFNISFLSLTLLLIFLRFDFFFNFTV-LEGNELNFLLQDINILIHP 181 +V FILF L+F F F EG +LN LLQD + IHP Sbjct: 124 RVLGVMGLVSVGFILF----------LLFTSNPFARLFPAPAEGRDLNPLLQDPGLAIHP 173 Query: 182 PLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTE 239 P++Y+ Y +S+ F+ S LI + K + R I W + I LGS WAY E Sbjct: 174 PMLYMGYVGFSVAFAFSIAALI-EGKLDAAWARWSRPWTSIAWMFLTIGITLGSWWAYYE 232 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL+ AL+HSL K + + ++ L + + + ++G L Sbjct: 233 LGWGGWWFWDPVENASFMPWLVGTALIHSLAATEKRGVFKTWTVLLAIFAFSLSLLGTFL 292 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIF--ILIVILLKKYTYFTSIFDLNNHYNFVY 357 VRSG+L SVH F + P + L F V + +L+ + ++ F+L + + + Sbjct: 293 VRSGVLTSVHAFASDPARGVFILVFLAVVVGGSLLLYAIRAPQVKSSASFELVSRESVLL 352 Query: 358 YIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINS 417 +L+++ +L +P +I L +FN + + + L ++ ++ Sbjct: 353 INNVLLVVTAASILLGTLYPLVIDALGLGKLSVGPPYFNAVFIPLMAPLAIVVGFGMLLH 412 Query: 418 WKL-------IFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLIL--------IIKQK- 461 WK ++L ++ + G + + Y + +L +L L KQ+ Sbjct: 413 WKRDELKTLSKSVWLIAVVCIAVAGLLPLLMPFYSWAAVLGLSLALWTLAVTGFAFKQRL 472 Query: 462 ---------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND--NF 504 + V H ++ + + ++Y E + + G TL D + Sbjct: 473 QNWSFERLKQIPAGFYGMTVAHVGIAVFVVGITMTSVYSIERDVRMAPGDTL---DMFGY 529 Query: 505 IIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSIIY 564 I F + NY + G +T H+ E + L +KR Y Q++ T++ I Sbjct: 530 IFNFHGVKQTEGPNYRAEQGYLTVT--HD---GETVAE-LSPQKRVYRVQTMPMTEAAID 583 Query: 565 TNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 L D+++ +G+ E G W R+ + FI W W+GG+F+ Sbjct: 584 AGLFRDLFVAIGEPLGEEGAWSLRVYYKSFIRWIWMGGVFM 624
ref|ZP_08815696.1| cytochrome c-type biogenesis protein CcmF [endosymbiont of Tevnia jerichonana (vent Tica)] ref|ZP_08828942.1| heme exporter protein C [endosymbiont of Riftia pachyptila (vent Ph05)] gb|EGV52171.1| heme exporter protein C [endosymbiont of Riftia pachyptila (vent Ph05)] gb|EGW55432.1| cytochrome c-type biogenesis protein CcmF [endosymbiont of Tevnia jerichonana (vent Tica)] (665 aa) Score: 187 bits (476), Expect: 1.21781e-44 Length: 581, Idn/Pos/Gap = 160/259/54 (27%/44%/9%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L +DFS+L+V + + P +YK+ +W +EGSL L FL + I F L L Sbjct: 62 LQNDFSVLYVAQHGNTKLPDIYKVSAVWGAHEGSLLLWAFL-LSAWSAAIATFSRNLPLP 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 + + I +I FL L +LL FD F EG ELN +LQD + IHPPL+ Sbjct: 121 MVARVLSVMGMI--SIGFL-LFMLLTSNPFDRMFPVP-FEGRELNPMLQDPGLAIHPPLL 176 Query: 185 YISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTELGW 242 Y+ Y +S+ F+ ++ K + R + W + I LGS WAY ELGW Sbjct: 177 YMGYVGFSVAFAF-AIAALLGGKLDAAWARWSRPWTTVAWVFLTLGIALGSWWAYYELGW 235 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GG+WFWD VE S +PWL+ AL+HSL + K + ++ L + + + ++G LVRS Sbjct: 236 GGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGAFKSWTVLLALFAFSLSLLGTFLVRS 295 Query: 303 GLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFT--SIFDLNNHYNFVYYIF 360 G+L SVH+F P + L F LV I +++ + Y T FD+ + +F+ Sbjct: 296 GVLTSVHSFAADPARGLFILIFLLVVIGGSLMLYAWRAPYITGGGRFDMVSRESFLLANN 355 Query: 361 LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWK- 419 LL+ ++ +L P + + F +FNK+ +L L + I WK Sbjct: 356 LLLSVFAGLVLLGTLAPLIYDAMQWGKISVGFPWFNKMFVLLTPFLALFVGIGPHARWKH 415 Query: 420 ---------LIFIFLGIIIIGGIRGFP-----EIFLALYFFIYLLLFTL-ILIIKQK--- 461 L FL + G I P E +AL + + + T ++ +K + Sbjct: 416 SEPTQLVRQLRTAFLISLAFGAITLLPFFSGGEWRVALGMGLAMWIATSHVVSVKDRLKH 475 Query: 462 ------------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDN 503 + ++ H ++ + L++ YG E + S G + + Sbjct: 476 KQGMAGFLKDLAAGGRSYYGMVLAHLGVAMFVVGVTLVSNYGIESDVRMSPGDSAKIA-G 534 Query: 504 FIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSII 563 + F ++ NY + G F ++ + VL EKR Y Q+ T++ I Sbjct: 535 YTFKFGGVSDYPGPNYNAHRGRFEVSQ------EGQLIAVLEPEKRTYFVQTRPMTEAAI 588 Query: 564 YTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 L D+Y+ LG+ W R+ + P++ W WLG + + Sbjct: 589 EWGLTRDLYVSLGEPLGNGDWSLRLYYKPYVRWIWLGALLM 629
ref|ZP_08400818.1| cytochrome c-type biogenesis protein CcmF [Rubrivivax benzoatilyticus JA2] gb|EGJ09151.1| cytochrome c-type biogenesis protein CcmF [Rubrivivax benzoatilyticus JA2] (662 aa) Score: 187 bits (476), Expect: 1.21781e-44 Length: 586, Idn/Pos/Gap = 149/252/76 (25%/43%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTL- 123 L DFS+++V + S+ P +Y++ +W +EGSL L + L + + + F L L Sbjct: 62 LRHDFSVVYVAQNSNSALPVIYQIAAVWGGHEGSLLL-WVLMLVGWTVAVAMFSRSLPLA 120 Query: 124 ----IVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 I+ + F+LF +LL FD ++G +LN LLQD ++ Sbjct: 121 FVARILGVMGLVAAGFLLF--------MLLTSNPFDRLIP-AAIDGRDLNPLLQDPGMIF 171 Query: 180 HPPLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAY 237 HPP++Y+ Y +S+ F+ + L+ + + R W +F I LGS WAY Sbjct: 172 HPPMLYMGYVGFSVAFAFAIAALLGGNLDAGWARWT-RPWTTWAWIFLTFGIALGSWWAY 230 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE S +PWL+ AL+HSL + K ++ +++L + + + ++G Sbjct: 231 NELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGSFKVWTVWLAITAFSLSLLGT 290 Query: 298 ILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVY 357 LVRSG+L SVH F P + F L F+ I+I L + + L + + Sbjct: 291 FLVRSGVLSSVHAFATDPRRGL----FILAFLVIVIGASLALFAWRAPKVGLGQRFGLMS 346 Query: 358 YI-------FLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLI 410 +L + LL LY P + + +F+ + L + L+ ++ Sbjct: 347 RESMLLVNNMVLTVATGAVLLGTLY-PLFLDALGMGKISVGPPYFDTVFGLLMAPLVLVL 405 Query: 411 IIFLINSWK-------------LIFIFLGIII-----IGGIRGFPEIFLALYFFI----- 447 I + WK + LG + G I LA+ ++I Sbjct: 406 GIGPLTRWKHDEAGPLLRRLVLPLVFTLGAALATGWAAGRITAATTGGLAMAYWILFATL 465 Query: 448 --------------YLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFS 493 LL L LI + ++ H + ++ Y E + + Sbjct: 466 VDLRQRLWPAGGQAGQLLHRLRLIPRAMAGMMIAHLGVGVFAFGVAMVNTYETERDVKMA 525 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 G T + + +++ + NY++ G IT P+ L EKR Y Sbjct: 526 PGDTTTVG-GYTFTMKEVREVQGPNYIAAQGVIDITRDGEPV------GSLAPEKRIYRV 578 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFW 598 Q + T++ ++ NL D+Y+ +G+ E G W R+ + PF+SW W Sbjct: 579 QQMPMTEAAVHGNLWRDLYVSMGE-QIEGGAWVVRVHYKPFVSWIW 623
ref|YP_004135624.1| cytochrome c-type biogenesis protein ccmf [Haemophilus influenzae F3031] emb|CBY81300.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae F3031] (648 aa) Score: 187 bits (476), Expect: 1.22801e-44 Length: 588, Idn/Pos/Gap = 160/264/72 (27%/44%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LLT---------------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLL 450 L+ + + LI + L + I + + G + + L+ Sbjct: 411 LVKWRRDQFSAIRTPVVICVFVMLIAGFALPYFLQDKITVSSVLG----SMMTVIIVLLV 466 Query: 451 LFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL--N 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 467 LYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKVG 525 Query: 502 DNFIIIFRDLNHIWST-----NYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 +N I D + T NY+ I+ P + LF+EKRFY + Sbjct: 526 ENAQIGRYDFKFVGVTDENGPNYIGGKAQIDISKDGQP------EASLFAEKRFYTVSRM 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 580 SMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_18467884.1| Cytochrome c heme lyase subunitcmF [Pasteurella multocida subsp. gallicida P1059] gb|EJZ81182.1| Cytochrome c heme lyase subunitcmF [Pasteurella multocida subsp. gallicida P1059] (651 aa) Score: 187 bits (475), Expect: 1.29105e-44 Length: 585, Idn/Pos/Gap = 156/270/66 (26%/46%/11%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ ++V S+ N P Y+L +W ++EGSL L + ++ T + +F +L Sbjct: 63 VNDFSVQYIVNNSNTNLPLHYRLSAVWGSHEGSLLL-WIWLLTLWGTAVAWFSKQLPQEA 121 Query: 126 KLTFFYNVYFILFNISFLSLTLLLIFL----RFDFFFNFTVLEGNELNFLLQDINILIHP 181 V +L + +S+ L+ L FD F ++G ELN LLQD+ ++ HP Sbjct: 122 -------VARVLGIMGIISIGFLIFVLFTSNPFDRTFPDFPVDGKELNPLLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R + W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE SL+PW+ ALLHSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENASLMPWIAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF 360 RSG+L SVH F + P + L + +V I +V+ K + S + Y+ + Sbjct: 295 RSGILVSVHAFASDPTRGLYILAYLVVVIGGSLVLYAYKGSQIRS-RENAERYSRETALL 353 Query: 361 LLVILYFLYLLFVL---YFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGILLT 408 L IL L VL P + K + FF+++ LLL +G L+ Sbjct: 354 LNNILLMSALSVVLLGTLLPLVHKQLGLGTISVGAPFFDQMFLIIMVPFSLLLGVGPLIK 413 Query: 409 ---------------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFT 453 +I+ L+ + L ++ + + + G +A+ F + L ++ Sbjct: 414 WRRDEFSAIRKPVILSLIVMLVAGFTLPYLLQDQLTVSAVLG---TMMAV-FIVLLSVYE 469 Query: 454 LILIIKQKFSF-------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN----- 501 L + +F H+ L + + +++G F N+SI + + ++ Sbjct: 470 LQQRATHRSAFWSGLTKLSRSHWGMVLAHLGVAM-SVWGIAFSQNYSIERDVRMSVGDSV 528 Query: 502 --DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 ++ F+ + NYL G + N ++ +LF+EKRFY + T Sbjct: 529 QIADYQFTFQGITEANGPNYLG--GKAQVDIRRN----GRVEAILFAEKRFYTVSKMTMT 582 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 ++ I D+Y+ LG+ ++ W R+ + PFI W W GG+F+ Sbjct: 583 EAAIDWGFTRDIYVALGENLGQDAWALRLYYKPFIRWIWFGGVFM 627
ref|ZP_10272245.1| cytochrome C biogenesis protein ccmF [Pseudoalteromonas citrea NCIMB 1889] (654 aa) Score: 187 bits (475), Expect: 1.30187e-44 Length: 589, Idn/Pos/Gap = 157/260/68 (26%/44%/11%) Query: 63 ILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLT 122 I L+ DF++ +V SS + P YK+ + W +EG++ L +Q + + N L Sbjct: 60 ITLMDDFTVAYVAHHSSTSLPWYYKITSTWGGHEGAILLWLVMQSS-WTALVAMMSNSLP 118 Query: 123 LIVKLTF-----FYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 +++ F V F+L+ + S F+ + +EG +LN LLQD + Sbjct: 119 WVLRARVLGVLGFLGVGFMLYTLWMSS--------PFERLLPYYPVEGRDLNPLLQDPGM 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWA 236 +IHPPL+Y+ Y S+ FS + L+ K R ++ W + I +GS WA Sbjct: 171 IIHPPLLYMGYVGLSVSFSFAIAALLTGKLDNTWAKWSRPWTMVAWGFLTLGITIGSWWA 230 Query: 237 YTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIG 296 Y+ELGWGG+WFWD VE SL+PWL++ ALLHSL K I + ++ L + + + ++G Sbjct: 231 YSELGWGGWWFWDPVENASLMPWLVATALLHSLASTEKRGIFKSWTVLLAITAFSLCLLG 290 Query: 297 IILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFV 356 +VRSG++ SVH F P+ + F L F+ +++ L Y S Y + Sbjct: 291 TFIVRSGIIVSVHAFATDPDRGL----FILSFLLVVVGGSLALYAMRVSEVKSEGRYKLL 346 Query: 357 YYIFLL------VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLI 410 L +++ L +L P + K ++ FFN++ + I L+ Sbjct: 347 SREVTLWANNIFLVVATLIVLLGTLLPMIHKELGLGSISIGVPFFNQMFAILIVPFALLL 406 Query: 411 IIFLINSWK------LIFIFLGIIIIG-------------GIRGFPEIFLALYFFIYLL- 450 I WK L LG++ + I AL +I L Sbjct: 407 GIAPFLRWKQNKLPPLARKALGLVASALLLTAVWLYSSYDTVSALTFIATALAVWITLGA 466 Query: 451 ---LFTLILIIKQ-----------KFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGK 496 +F + + KQ ++ I+ H F++ + L + Y E ++ G Sbjct: 467 LVDIFEKVTVEKQLLEGFKRQSLSYWAMILGHVGIAFVIAGVTLTSAYSVERSVSVKPGD 526 Query: 497 TLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 LLN+ + F + I NY G ++T + E L++EKR Y Sbjct: 527 IALLNE-YQYRFEGVKEIRGPNYSGHAG--VVTVLKD----EQKVTELYAEKRLYDVGMQ 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYS-RILFMPFISWFWLGGIFL 604 T++ I D+Y+ LG+ NG++S RI P++ W WLGG+ + Sbjct: 580 FMTEAAIDDGFFRDLYLALGE-QLSNGYWSLRIYHKPYVRWMWLGGLLI 627
ref|ZP_12487437.1| Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M19501] gb|EGT75975.1| Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M19501] (648 aa) Score: 187 bits (475), Expect: 1.33487e-44 Length: 589, Idn/Pos/Gap = 156/268/74 (26%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ +VV S+ P Y+L +W ++EGSL L + + + + + L+ Sbjct: 63 VNDFSVQYVVNNSNTALPIYYRLSAVWGSHEGSLLL--------WIWLLAVWSSAVALLS 114 Query: 126 KLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFT--VLEGNELNFLLQDINILIHP 181 K V +L + +S+ +L +F F F ++G ELN +LQD+ ++ HP Sbjct: 115 KHLPQEAVARVLGIMGIISVGFVLFVLFTSNPFTRTFPDFPVDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 LL+ FL + F P + K ++ FF+++ L+ + L+ I Sbjct: 351 MLLLNNIFLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 415 INSWKL---------IFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILII------- 458 + W+ + I + +++I G P FL + +L +++ +I Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMVIAGF-ALP-YFLQDKITVSSVLGSMMTVIIALLALY 468 Query: 459 --KQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILNFSIGKTLLLN- 501 +Q+ + H FF+ + L +T++G F NFS+ + + + Sbjct: 469 ELQQRAT----HRESFFVGVRKLSRSHWGMMLAHLGVAMTVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFAGVTDANGPNYVGGKAQIDISKDGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_01881569.1| Cytochrome c biogenesis factor [Roseovarius sp. TM1035] gb|EDM30151.1| Cytochrome c biogenesis factor [Roseovarius sp. TM1035] (663 aa) Score: 187 bits (475), Expect: 1.41515e-44 Length: 589, Idn/Pos/Gap = 159/260/65 (26%/44%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDF++ VVE S +P ++K+ W ++EGSL L F+ +++ + + + Sbjct: 62 VVSDFTVRNVVENSHSLKPMIFKVAGTWGSHEGSLVLWTFI-LVLFGAGVALLGRNIPVG 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 +K +I ++ FLS +L F+ F L+G +LN LLQDI + +HPPL+ Sbjct: 121 LKARTLSVQAWI--SVGFLSF-MLFTSNPFERVFP-PPLDGTDLNPLLQDIGLAMHPPLL 176 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y Y +SI+FS + LI + +R L W + I LGS WAY ELGWG Sbjct: 177 YFGYVGFSIVFSFAVAALIEGRVDPAWARWVRPWTLTAWISLTAGIALGSWWAYYELGWG 236 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE S +PWLL ALLHS ++ K + ++ L + + + ++G +VRSG Sbjct: 237 GWWFWDPVENASFMPWLLGTALLHSAIVTEKRDTFKSWTILLAILTFSLSLLGTFIVRSG 296 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS--IFDLNNHYNFVYYIFL 361 +L SVH F P + L V I + + + S +F + + L Sbjct: 297 ILTSVHAFAVDPARGVYILGLLGVTIVGSLTLYAWRAPQLGSGGVFRPISREAGLLLNNL 356 Query: 362 LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINS---- 417 L+ +LF +P ++ D + +FN FI +L L+II I Sbjct: 357 LLATATATVLFGTLYPLFVEAVTDEKISVGPPYFNAT---FIPFMLPLVIIMGIGPFLSW 413 Query: 418 --------WKLIFIFLGIIIIGGIRGF--------P-----EIFLALYFFIYLL------ 450 W+ + + GI I G+ G P I +A + F+ L Sbjct: 414 KRADLPGIWQRLRLVFGIAI--GVAGIVWYLQTDGPLLAVVSIGIAAWVFVATLREWALR 471 Query: 451 --LFTLIL---------IIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLL 499 LF L L + + + H ++L + T + EE +L G T+ Sbjct: 472 IKLFDLPLSQSLRRARNLPRAAHGMTLAHLGVAMLVLGFVGSTAWKEERVLFAEPGTTVE 531 Query: 500 LNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 + F +IF + + NY++ G + + +L E+R Y T Sbjct: 532 IA-GFEVIFDGVERLRGPNYIAQQGQLRVLKDGREIT------LLRPERRNYPVAGTSTT 584 Query: 560 KSIIYTNLMSDVYILLGDGNFENG---WYSRILFMPFISWFWLGGIFLL 605 +S I + L D+Y+ + + E W RIL+ P ++W W+G L+ Sbjct: 585 ESAIRSTLRGDLYVTISEPATEKASGQWNLRILYEPLVNWIWIGATMLV 633
ref|ZP_10447456.1| cytochrome c-type biogenesis protein CcmF [Bartonella doshiae NCTC 12862] gb|EJF81964.1| cytochrome c-type biogenesis protein CcmF [Bartonella doshiae NCTC 12862] (651 aa) Score: 187 bits (475), Expect: 1.5905e-44 Length: 589, Idn/Pos/Gap = 169/273/77 (28%/46%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL--- 121 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L + L + T + F L Sbjct: 62 MVSDFSVLNVVENSHSEKPMLYKITGVWGNHEGSMLL-WVLSLAFFSTLMALFSGHLPEQ 120 Query: 122 --TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 TL++ + F+LF I FLS L + N L+G++LN LLQDI + I Sbjct: 121 FKTLVLICQSWITSAFLLF-ILFLSNPFLRV--------NPPALQGDDLNPLLQDIALAI 171 Query: 180 HPPLIYISYASYSIIFSISFTILIIKC--KFYVLYILRFLNLIGWFIASFSILLGSRWAY 237 HPPL+Y+ Y +S+ FS S LI+ + + +I +L L+ W + I++GS WAY Sbjct: 172 HPPLLYLGYVGFSLCFSFSIAALIMGDVDRVWARWIRPWL-LLSWCFLTLGIMVGSYWAY 230 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE +S +PWL AL+HS L+ K ++ +LFL + + + ++G Sbjct: 231 YELGWGGYWFWDPVENVSFMPWLSGTALMHSALVLEKRETLKSWTLFLALLTFSLALLGA 290 Query: 298 ILVRSGLLQSVHTFVNSP---NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYN 354 LVRSGLL SVH+F P ++ +FF F+L + T ++ Sbjct: 291 FLVRSGLLISVHSFAVDPARGRAILALFFFFTGGAFLLFALRAPTLTVGRLFQPISREAF 350 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 V FLL+ + L+ LY P+ + + FFN L G L+ +++F+ Sbjct: 351 IVLNNFLLITITVTVLIGTLY-PYFFEALTGQKISVGAAFFN----LTCGSLMIFLLLFV 405 Query: 415 ----INSWK----------LIFIFLGIIIIGGI----RGFPEIFLALYFFIYLLLF---- 452 + SWK L F+F + ++ I F IF AL + +F Sbjct: 406 PFGSMISWKRGDFFAVFERLWFVFAAVCVVCFITFYATSFQNIFAALGIGLSAFVFLGSL 465 Query: 453 ------------TLILIIKQ-------KFSFIVYHFNFFFIMLSLLLITIYGEEFILNFS 493 L+L +K+ + H + ++ + +G+E IL Sbjct: 466 ADLWIKTGYRKTALVLRVKRFVGLPWSILGAAIAHMGLGVTLFGIVYVATFGQERILTMH 525 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFH-NPMCYENIQNVLFSEKRFYL 552 IG + + + + +++ S N+ +FH N +N + + +RFY Sbjct: 526 IGDMITIAGKTLHFYEVRDNVGS--------NYSAMEFHFNIYENKNAPRPVMASRRFYS 577 Query: 553 YQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGG 601 + T+ I + +S +YI G + + G I + P+I WLG Sbjct: 578 SSNTATTEVGIQNHGLSQLYIAPGRID-DKGLVVHIWWKPYIICVWLGA 625
ref|ZP_04466238.1| cytochrome C-type biogenesis protein [Haemophilus influenzae 7P49H1] gb|EEP46847.1| cytochrome C-type biogenesis protein [Haemophilus influenzae 7P49H1] (648 aa) Score: 187 bits (474), Expect: 1.67216e-44 Length: 589, Idn/Pos/Gap = 159/263/74 (26%/44%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LLT---------------LIIIFLINSWKLIFIFLGIIIIGGIRG-FPEIFLALYFFIYL 449 L+ + + LI + L + I + + G + +AL L Sbjct: 411 LVKWRRDQFSAIRTPVVICVFVMLIAGFALPYFLQDKITVSSVLGSMMTVIIAL-----L 465 Query: 450 LLFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN- 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 466 ALYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFAGVTDVNGPNYIGGKAQIDISKNGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|YP_006504957.1| heme lyase, CcmF subunit [Legionella pneumophila subsp. pneumophila] emb|CCD05013.1| heme lyase, CcmF subunit [Legionella pneumophila subsp. pneumophila] (650 aa) Score: 187 bits (474), Expect: 1.71454e-44 Length: 590, Idn/Pos/Gap = 168/264/64 (28%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+ DFS+++V+ SS+ P YK +W +EGS+ L + + + +F + L Sbjct: 62 LMDDFSVIYVLNNSSLLLPWFYKFCAVWGGHEGSMLL-WVAILSFWMILVCFFSSSLDTE 120 Query: 125 VKLTFFYNVYFILFNISFLSLT--LLLIFLRFDFFFNFTVL--EGNELNFLLQDINILIH 180 ++ +L + +LS+ L L+ F F VL +G +LN LLQD L H Sbjct: 121 MRAR-------VLVILGWLSIGFILFLLMTSNPFLRQFQVLNTQGRDLNPLLQDPGFLFH 173 Query: 181 PPLIYISYASYSIIFSISFTIL-IIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PP++Y+ Y + + F+ + L K + R L W + I LGS WAY E Sbjct: 174 PPMLYMGYVGFCVAFAFAIAALWAGKVETSWSKWTRPWTLAAWCCLTAGITLGSWWAYRE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL+ ALLHSL + + + ++ L +A + + +IG L Sbjct: 234 LGWGGWWFWDPVENASFMPWLVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSLSLIGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY- 358 VRSG+L SVH F P + L F L I + + L + +N H + Sbjct: 294 VRSGVLTSVHAFAVDPQRGLYILGFLLFVIGGSLTLFL----FRAQTLQVNKHPGLLSRE 349 Query: 359 -------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 +FL+VI+ L +L +P L++ L +FN + + + LL L+ Sbjct: 350 SALLLNNVFLVVIM--LTVLMGTVYPLLVEGLGLGKLSVGAPYFNAVFVPLMIPLLLLMG 407 Query: 412 IFLINSW----------KLIFIFLGIIIIGGIRGF---PEI----FLALYFFIYLLLFTL 454 + + W KL IFL +I+ I F EI L L ++LL T Sbjct: 408 LGVRLKWQNDCWRDVFRKLNRIFLLSLILPVILLFCTSTEIHLTALLGLILAFWVLLSTA 467 Query: 455 -----------ILIIKQKF-SFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + + Q + ++ H ++ + + + YG + + S GK + L D Sbjct: 468 NAAYHKVRDRGVAGVGQAYWGMVLAHCGVAATVIGIAVSSAYGVQDDVRMSPGKQVNLLD 527 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + I F + + NY T F I Y+N +F EKR Y T+S Sbjct: 528 -YQIGFINQTPLNGPNYKGTRAEFSIQ-------YQNKTRKIFPEKRVYTIGQTPMTESA 579 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 I D+YI LG+ E+ W RI + P + W W GG +L + +L Sbjct: 580 IDVTPFRDIYIALGEPLSEDAWSVRIYYKPLVRWIWAGGFMILAGGVLAL 629
ref|YP_001291045.1| cytochrome C-type biogenesis protein [Haemophilus influenzae PittEE] gb|ABQ98662.1| cytochrome C-type biogenesis protein [Haemophilus influenzae PittEE] (648 aa) Score: 187 bits (474), Expect: 1.77273e-44 Length: 589, Idn/Pos/Gap = 159/263/74 (26%/44%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LLT---------------LIIIFLINSWKLIFIFLGIIIIGGIRG-FPEIFLALYFFIYL 449 L+ + + LI + L + I + + G + +AL L Sbjct: 411 LVKWRRDQFSAIRTPVVICVFVMLIAGFALPYFLQDKITVSSVLGSMMTVIIAL-----L 465 Query: 450 LLFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN- 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 466 ALYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFAGVTDVNGPNYIGGKAQIDISKNGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|YP_001005589.1| putative cytochrome c-type biogenesis protein [Yersinia enterocolitica subsp. enterocolitica 8081] ref|YP_004299036.1| putative cytochrome c-type biogenesis protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] ref|YP_006003635.1| cytochrome c heme lyase subunit CcmF [Yersinia enterocolitica subsp. palearctica Y11] ref|ZP_12867253.1| cytochrome c-type biogenesis protein CcmF [Yersinia enterocolitica subsp. palearctica PhRBD_Ye1] ref|ZP_20504511.1| Cytochrome c heme lyase subunit CcmF [Yersinia enterocolitica IP 10393] emb|CAL11360.1| putative cytochrome c-type biogenesis protein [Yersinia enterocolitica subsp. enterocolitica 8081] emb|CBY28045.1| cytochrome c heme lyase subunit CcmF [Yersinia enterocolitica subsp. palearctica Y11] gb|ADZ43333.1| putative cytochrome c-type biogenesis protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gb|EHB22016.1| cytochrome c-type biogenesis protein CcmF [Yersinia enterocolitica subsp. palearctica PhRBD_Ye1] emb|CCO67551.1| Cytochrome c heme lyase subunit CcmF [Yersinia enterocolitica IP 10393] (655 aa) Score: 187 bits (474), Expect: 1.77273e-44 Length: 609, Idn/Pos/Gap = 156/269/94 (25%/44%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DF++ +V S+ + P Y++ W +EGSL L + ++ + + L Sbjct: 62 VVNDFTVSYVAANSNSHLPVYYRIAATWGAHEGSLLL--------WVLLLSCWSLAVALF 113 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTV----LEGNELNFLLQDINILIH 180 + V +L + ++ LL + FN T+ ++GN+LN LLQD+ ++ H Sbjct: 114 SRSMPDDAVARVLSVLGMITGGFLLFIILTSNPFNRTLPDFPIDGNDLNPLLQDVGLIFH 173 Query: 181 PPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PPL+Y+ Y +S+ F+ + L+ + R W + I+LGS WAY E Sbjct: 174 PPLLYMGYVGFSVAFAFAIASLMAGRLDSAWARWSRPWTQAAWVFLTMGIVLGSAWAYYE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G L Sbjct: 234 LGWGGWWFWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLMGTFL 293 Query: 300 VRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 VRSG+L SVH+F + P + I Y +V L++ +K + H F Sbjct: 294 VRSGVLVSVHSFASDPARGMFILAYLVIVIGGSLLLYAVKG----AQVRSRTQHEVFSRE 349 Query: 359 IFLL-----VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 FLL +I L +L P + K ++ FFN + LL+ IG Sbjct: 350 TFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMAPMALLMGIG 409 Query: 405 ILL----------------TLIIIFLIN---SWKLIFIFLGIIIIGGIRGFPEIFLALYF 445 L+ L++ L++ W L G+ ++G L Sbjct: 410 PLVRWRRDEPSKLYKRLGVALVVTLLMSILVPWLLQDTIAGMTVVG-----------LMM 458 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILN 491 I++++ T++ + ++ H + F+ LS L +T+ G F N Sbjct: 459 AIWVIILTVMELHER-----ATHRHGFWRGLSHLSRSHWGMVLGHLGVAVTVIGIAFSQN 513 Query: 492 FSIGKTLLLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVL 544 +S+ + + + I +FRD++ + NY G +T P + L Sbjct: 514 YSVERDVRMKAGDSIDIHDYHFVFRDVHDVKGPNYTGGVGIIDVTRNGKP------EATL 567 Query: 545 FSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 +EKR+Y + T++ I L D+Y LG+ + W R+ + PF+ W W GG+F+ Sbjct: 568 HAEKRYYSVARSMMTEAAIDGGLTRDLYAALGEELDDGSWAVRLYYKPFVRWIWYGGVFM 627 Query: 605 LDSIIFSLF 613 IF +F Sbjct: 628 AIGGIFCMF 636
ref|ZP_13882113.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12E] gb|EHX48171.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12E] (647 aa) Score: 187 bits (474), Expect: 1.78758e-44 Length: 588, Idn/Pos/Gap = 155/265/77 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLN---LIGWFIASFSILLGSR 234 + HPPL+Y+ Y +S+ F+ F I + C RF L W + I+LGS Sbjct: 171 IFHPPLLYMGYVGFSVAFA--FAIASLLCGRLDSTYARFTRPWTLAAWIFLTLGIVLGSA 228 Query: 235 WAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVII 294 WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + + Sbjct: 229 WAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCL 288 Query: 295 IGIILVRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD-LNNH 352 +G LVRSG+L SVH F + P + I + LV L++ + Y + + + L + Sbjct: 289 LGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGYKVRSRVNNALWSR 348 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFI 403 + + +L++ L +L P + K ++ FFN + LLL + Sbjct: 349 ESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGV 408 Query: 404 GILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALY 444 G L+ L+II I++ L + + + ++G LA+ Sbjct: 409 GPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMA 459 Query: 445 FFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 CWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_01783742.1| cytochrome C-type biogenesis protein [Haemophilus influenzae 22.1-21] ref|ZP_01793702.1| cytochrome C-type biogenesis protein [Haemophilus influenzae PittII] ref|YP_005827973.1| cytochrome c maturation heme lyase subunit CcmF [Haemophilus influenzae R2866] gb|EDJ89375.1| cytochrome C-type biogenesis protein [Haemophilus influenzae 22.1-21] gb|EDK12328.1| cytochrome C-type biogenesis protein [Haemophilus influenzae PittII] gb|ADO81242.1| cytochrome c maturation heme lyase subunit CcmF [Haemophilus influenzae R2866] (648 aa) Score: 187 bits (474), Expect: 1.80256e-44 Length: 588, Idn/Pos/Gap = 159/263/72 (27%/44%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LLT---------------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLL 450 L+ + + LI + L + I + + G + + L+ Sbjct: 411 LVKWRRDQFSAIRTPVVICVFVMLIAGFALPYFLQDKITVSSVLG----SMMTVIIVLLV 466 Query: 451 LFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL--N 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 467 LYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKVG 525 Query: 502 DNFII-----IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 +N I F + NY+ I+ P + LF+EKRFY + Sbjct: 526 ENAQIGRYDFKFAGVTDENGPNYIGGKAQIDISKDGQP------EASLFAEKRFYTVSRM 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 580 SMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|YP_248763.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae 86-028NP] gb|AAX88103.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae 86-028NP] (648 aa) Score: 187 bits (474), Expect: 1.83289e-44 Length: 588, Idn/Pos/Gap = 161/265/72 (27%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LL-----------TLIII----FLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLL 450 L+ T ++I LI + L + I + + G + + L+ Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMLIAGFALPYFLQDKITVSSVLG----SMMTVIIVLLV 466 Query: 451 LFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL--N 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 467 LYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKVG 525 Query: 502 DNFII-----IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 +N I F + NY+ I+ P + LF+EKRFY + Sbjct: 526 ENAQIGRYDFKFAGVTDENGPNYIGGKAQIDISKDGQP------ETSLFAEKRFYTVSRM 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 580 SMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|YP_005363707.1| cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. HN06] gb|AFF24536.1| cytochrome c-type biogenesis protein CcmF [Pasteurella multocida subsp. multocida str. HN06] (651 aa) Score: 187 bits (474), Expect: 1.83289e-44 Length: 585, Idn/Pos/Gap = 155/268/66 (26%/45%/11%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ ++V S+ N P Y+L +W ++EGSL L + ++ + +F +L Sbjct: 63 VNDFSVQYIVNNSNTNLPLHYRLSAVWGSHEGSLLL-WIWLLTLWGAAVAWFSKQLPQEA 121 Query: 126 KLTFFYNVYFILFNISFLSLTLLLIFL----RFDFFFNFTVLEGNELNFLLQDINILIHP 181 V +L + +S+ L+ L FD F ++G ELN LLQD+ ++ HP Sbjct: 122 -------VARVLGIMGIISIGFLIFVLFTSNPFDRTFPDFPVDGKELNPLLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R + W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE SL+PW+ ALLHSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENASLMPWIAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF 360 RSG+L SVH F + P + L + +V I +V+ K + S + Y+ + Sbjct: 295 RSGILVSVHAFASDPTRGLYILAYLVVVIGGSLVLYAYKGSQIRSRENA-ERYSRETALL 353 Query: 361 LLVILYFLYLLFVL---YFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGILLT 408 L IL L VL P + K + FF+++ LLL +G L+ Sbjct: 354 LNNILLMSALSVVLLGTLLPLVHKQLGLGTISVGAPFFDQMFLIIMVPFSLLLGVGPLIK 413 Query: 409 ---------------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFT 453 +I+ L+ + L ++ + + + G +A+ F + L ++ Sbjct: 414 WRRDEFSAIRKPVILSLIVMLVAGFALPYLLQDQLTVSAVLG---TMMAV-FIVLLSVYE 469 Query: 454 LILIIKQKFSF-------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN----- 501 + +F H+ L + + +++G F N+SI + + +N Sbjct: 470 FQQRATHRSAFWSGLTKLSRSHWGMVLAHLGMAM-SVWGIAFSQNYSIERDVRMNVGDSV 528 Query: 502 --DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 ++ F+ + NYL G + N ++ +LF+EKRFY + T Sbjct: 529 QIADYQFTFQGITEANGPNYLG--GKAQVDIRRN----GQVEAILFAEKRFYTVSKMTMT 582 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 ++ I D+Y+ LG+ ++ W R+ + PFI W W GG+F+ Sbjct: 583 EAAIDWGFTRDIYVALGENLGQDAWALRLYYKPFIRWIWFGGVFM 627
ref|ZP_11982471.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 97.0259] ref|ZP_12095503.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli PCN033] gb|EGP24552.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli PCN033] gb|EIH13929.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 97.0259] (647 aa) Score: 187 bits (474), Expect: 1.84825e-44 Length: 587, Idn/Pos/Gap = 153/265/75 (26%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I +M D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGIMRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_20090156.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE147] gb|ELG93311.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE147] (647 aa) Score: 187 bits (474), Expect: 1.92699e-44 Length: 587, Idn/Pos/Gap = 153/265/75 (26%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYTRFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I +M D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGIMRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_126251.1| cytochrome C-type biogenesis protein CcmF [Legionella pneumophila str. Lens] emb|CAH15126.1| cytochrome C-type biogenesis protein CcmF [Legionella pneumophila str. Lens] (650 aa) Score: 187 bits (474), Expect: 1.92699e-44 Length: 590, Idn/Pos/Gap = 165/261/64 (27%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+ DFS+ +V+ SS+ P YK +W +EGS+ L + + + +F + L Sbjct: 62 LMDDFSVNYVLNNSSLLLPWFYKFCAVWGGHEGSMLL-WVAILSFWMILVCFFSSSLDTE 120 Query: 125 VKLTFFYNVYFILFNISFLSLT--LLLIFLRFDFFFNFTVL--EGNELNFLLQDINILIH 180 ++ +L + +LS+ L L+ F F VL +G +LN LLQD L H Sbjct: 121 MRAR-------VLVILGWLSIGFILFLLMTSNPFLRQFQVLNTQGRDLNPLLQDPGFLFH 173 Query: 181 PPLIYISYASYSIIFSISFTIL-IIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PP++Y+ Y + + F+ + L K + R L W + I LGS WAY E Sbjct: 174 PPMLYMGYVGFCVAFAFAIAALWAGKVETSWSKWTRPWTLAAWCCLTAGITLGSWWAYRE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL+ ALLHSL + + + ++ L +A + + +IG L Sbjct: 234 LGWGGWWFWDPVENASFMPWLVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSLSLIGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY- 358 VRSG+L SVH F P + L F L I + + L + +N H + Sbjct: 294 VRSGVLTSVHAFAVDPQRGLYILGFLLFVIGGSLTLFL----FRAQTLQVNKHPGLLSRE 349 Query: 359 -------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 +FL+VI+ L +L +P L++ L +FN + + + LL L+ Sbjct: 350 SALLLNNVFLVVIM--LTVLMGTVYPLLVEGLGLGKLSVGAPYFNAVFVPLMIPLLLLMG 407 Query: 412 IFLINSW----------KLIFIFLGIIIIGGIRGF---PEIFLALYFFIYLLLFTLILII 458 + + W KL IFL +I+ I F EI L + L + L+ + Sbjct: 408 LGVRLKWQNDCWRDVFRKLNRIFLLSLILPVILLFCTSTEIHLTALLGLILAFWVLLSTV 467 Query: 459 KQKF----------------SFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + ++ H ++ + + + YG + + S GK + L D Sbjct: 468 NAAYHKVRDREMAGVGQAYWGMVLAHCGVAATVIGIAVSSAYGVQDDVRMSPGKQVNLLD 527 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + I F + + NY T F I Y+N +F EKR Y + T+S Sbjct: 528 -YQIGFINQTPLNGPNYKGTRAEFSIQ-------YQNKTRQIFPEKRVYTIGQMPMTESA 579 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 I D+YI LG+ E+ W RI + P + W W GG +L + +L Sbjct: 580 IDVTPFRDIYIALGEPLSEDAWSVRIYYKPLVRWIWAGGFMILAGGVLAL 629
ref|ZP_12362196.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-272] ref|ZP_12366972.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-227] gb|EGK22476.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-272] gb|EGK36250.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-227] (647 aa) Score: 187 bits (474), Expect: 1.94313e-44 Length: 587, Idn/Pos/Gap = 153/266/75 (26%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD-LNNHY 353 G LVRSG+L SVH F + P + IF + LV L++ + + + + + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFIFAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLATAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGAMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_003350067.1| cytochrome c-type biogenesis protein [Escherichia coli SE15] dbj|BAI55617.1| cytochrome c-type biogenesis protein [Escherichia coli SE15] (647 aa) Score: 187 bits (474), Expect: 2.00908e-44 Length: 587, Idn/Pos/Gap = 153/266/75 (26%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLLSR-RLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + I + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKITFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_14762022.1| cytochrome c-type biogenesis protein CcmF [Yersinia enterocolitica subsp. enterocolitica WA-314] gb|EKA27069.1| cytochrome c-type biogenesis protein CcmF [Yersinia enterocolitica subsp. enterocolitica WA-314] (655 aa) Score: 187 bits (474), Expect: 2.07726e-44 Length: 609, Idn/Pos/Gap = 156/269/94 (25%/44%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DF++ +V S+ + P Y++ W +EGSL L + ++ + + L Sbjct: 62 VVNDFTVSYVAANSNSHLPVYYRIAATWGAHEGSLLL--------WVLLLSCWSLAVALF 113 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTV----LEGNELNFLLQDINILIH 180 + V +L + ++ LL + FN T+ ++GN+LN LLQD+ ++ H Sbjct: 114 SRSMPDDAVARVLSVLGMITGGFLLFIILTSNPFNRTLPDFPIDGNDLNPLLQDVGLIFH 173 Query: 181 PPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PPL+Y+ Y +S+ F+ + L+ + R W + I+LGS WAY E Sbjct: 174 PPLLYMGYVGFSVAFAFAIASLMAGRLDSAWARWSRPWTQAAWVFLTMGIVLGSAWAYYE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G L Sbjct: 234 LGWGGWWFWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLMGTFL 293 Query: 300 VRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 VRSG+L SVH+F + P + I Y +V L++ +K + H F Sbjct: 294 VRSGVLVSVHSFASDPARGMFILAYLVIVIGGSLLLYAVKG----AQVRSRTQHEVFSRE 349 Query: 359 IFLL-----VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 FLL +I L +L P + K ++ FFN + LL+ IG Sbjct: 350 TFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMAPMALLMGIG 409 Query: 405 ILL----------------TLIIIFLIN---SWKLIFIFLGIIIIGGIRGFPEIFLALYF 445 L+ L++ L++ W L G+ ++G L Sbjct: 410 PLVRWRRDEPSKLYKRLGGALVVTLLMSILVPWLLQDTIAGMTVVG-----------LMM 458 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILN 491 I++++ T++ + ++ H + F+ LS L +T+ G F N Sbjct: 459 AIWVIILTVMELHER-----ATHRHGFWRGLSHLSRSHWGMVLGHLGVAVTVIGIAFSQN 513 Query: 492 FSIGKTLLLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVL 544 +S+ + + + I +FRD++ + NY G +T P + L Sbjct: 514 YSVERDVRMKAGDSIDIHDYHFVFRDVHDVKGPNYTGGVGIIDVTRNGKP------EATL 567 Query: 545 FSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 +EKR+Y + T++ I L D+Y LG+ + W R+ + PF+ W W GG+F+ Sbjct: 568 HAEKRYYSVARSMMTEAAIDGGLTRDLYAALGEELDDGSWAVRLYYKPFVRWIWYGGVFM 627 Query: 605 LDSIIFSLF 613 IF +F Sbjct: 628 AIGGIFCMF 636
ref|YP_988750.1| cytochrome c-type biogenesis protein CycK [Bartonella bacilliformis KC583] ref|ZP_16197372.1| cytochrome c-type biogenesis protein CycK [Bartonella bacilliformis INS] gb|ABM44872.1| cytochrome c-type biogenesis protein CycK [Bartonella bacilliformis KC583] gb|EKS45000.1| cytochrome c-type biogenesis protein CycK [Bartonella bacilliformis INS] (659 aa) Score: 187 bits (474), Expect: 2.07726e-44 Length: 600, Idn/Pos/Gap = 168/279/77 (28%/46%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+L VV S +P LYK++ +W N+EGS+ L + L + + F KL + Sbjct: 62 VISDFSVLNVVRNSHSEKPMLYKIVGVWGNHEGSMLL-WVLILAFFSLLVALFGQKLPVQ 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL--IFLRFDFF-FNFTVLEGNELNFLLQDINILIHP 181 K + +L S ++ LL +FL F N L+G++LN +LQDI + IHP Sbjct: 121 FKAS-------VLGCQSLITSAFLLFILFLSNPFLRINPPALQGSDLNPVLQDIALAIHP 173 Query: 182 PLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PL+Y+ Y +S+ FS S LI + + ++ R L+ W + I++GS WAY E Sbjct: 174 PLLYLGYVGFSVCFSFSVAALITGYVDRVWARWV-RPWVLLAWIFLTLGIMVGSYWAYYE 232 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE +S +PWL ALLHS+L+ K ++ +LFL + + + ++G L Sbjct: 233 LGWGGYWFWDPVENVSFMPWLAGTALLHSILVLEKRGALKNWTLFLAILTFSLSLMGTFL 292 Query: 300 VRSGLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVI---LLKKYTYFTSIFDLNNHY 353 VRSG+L SVH+F P L+ L+FF F+L + +LK +F I + Sbjct: 293 VRSGILISVHSFAVDPARGWALLSILFFFTGSAFLLFALRAPILKTDGFFLPI----SRE 348 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN----------------- 396 F+ L + +L +P+ + + FFN Sbjct: 349 GFIVLNNLFLTTATATILIGTLYPYFFETLTGQKISVGAAFFNLTFGPLMVPLLFFVPFG 408 Query: 397 ---------------KILLLFIGILLTLIIIFLINSWKLIFIFLGI-----IIIGGIRGF 436 ++ +F+ + I F SW+ IF LG+ + +GG+ Sbjct: 409 PIIAWKRGDLLAVFERLWFVFLLSCIACFITFYAASWRDIFCALGVGLSVFVFLGGLADL 468 Query: 437 --PEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSI 494 FF+ + F + + F + H + ++ +++G+E IL I Sbjct: 469 WVKSGHRKTPFFVRIKRF--LGLPWSVFGAALAHMGLGITLFGIVYSSLFGQERILVMKI 526 Query: 495 GKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFSEKRFYL 552 G ++ + D +I F ++ ++ +NY + +F I YEN ++ + + KRFY Sbjct: 527 GDSITMADK-VIRFDEVRNVAGSNYSAMQFDFKI--------YENQNSIHTMTASKRFYS 577 Query: 553 YQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 Q++ TK I + S YI+ G + + G I + P++ W G + FSL Sbjct: 578 SQNISTTKVGIQSYGFSQFYIVPGRID-DQGLALHIWWKPYVICIWFGAFMMAIGGCFSL 636
ref|YP_005185252.1| cytochrome c-type biogenesis protein CcmF [Legionella pneumophila subsp. pneumophila ATCC 43290] gb|AEW51153.1| cytochrome c-type biogenesis protein CcmF [Legionella pneumophila subsp. pneumophila ATCC 43290] (650 aa) Score: 186 bits (473), Expect: 2.1839e-44 Length: 590, Idn/Pos/Gap = 168/264/64 (28%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+ DFS+ +V+ SS+ P YK +W +EGS+ L + + + +F + L Sbjct: 62 LMDDFSVNYVLNNSSLLLPWFYKFCAVWGGHEGSMLL-WVAILSFWMILVCFFSSSLDTE 120 Query: 125 VKLTFFYNVYFILFNISFLSLT--LLLIFLRFDFFFNFTVL--EGNELNFLLQDINILIH 180 ++ +L + +LS+ L L+ F F VL +G +LN LLQD L H Sbjct: 121 MRAR-------VLVILGWLSIGFILFLLMTSNPFLRQFQVLNTQGRDLNPLLQDPGFLFH 173 Query: 181 PPLIYISYASYSIIFSISFTIL-IIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PP++Y+ Y + + F+ + L K + R L W + I LGS WAY E Sbjct: 174 PPMLYMGYVGFCVAFAFAIAALWAGKVETSWSKWTRPWTLAAWCCLTAGITLGSWWAYRE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL+ ALLHSL + + + ++ L +A + + +IG L Sbjct: 234 LGWGGWWFWDPVENASFMPWLVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSLSLIGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY- 358 VRSG+L SVH F P + L F L I + + L + +N H + Sbjct: 294 VRSGVLTSVHAFAVDPQRGLYILGFLLFVIGGSLTLFL----FRAQTLQVNKHPGLLSRE 349 Query: 359 -------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 +FL+VI+ L +L +P L++ L +FN + + + LL L+ Sbjct: 350 SALLLNNVFLVVIM--LTVLMGTVYPLLVEGLGLGKLSVGAPYFNAVFVPLMIPLLLLMG 407 Query: 412 IFLINSW----------KLIFIFLGIIIIGGIRGF---PEI----FLALYFFIYLLLFTL 454 + + W KL IFL +I+ I F EI L L ++LL T Sbjct: 408 LGVRLKWQNDCWRDVFRKLNRIFLLSLILPVILLFCTSTEIHLTALLGLILAFWVLLSTA 467 Query: 455 -----------ILIIKQKF-SFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + + Q + ++ H ++ + + + YG + + S GK + L D Sbjct: 468 NAAYHKVRDRGVAGVGQAYWGMVLAHCGVAATVIGIAVSSAYGVQDDVRMSPGKQVNLLD 527 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + I F + + NY T F I Y+N +F EKR Y + T+S Sbjct: 528 -YQIGFINQTPLSGPNYKGTRAEFSIQ-------YQNKTRQIFPEKRVYTIGQMPMTESA 579 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 I D+YI LG+ E+ W RI + P + W W GG +L + +L Sbjct: 580 IDVTPFRDIYIALGEPLSEDAWSVRIYYKPLVRWIWAGGFMILAGGVLAL 629
ref|YP_005829691.1| cytochrome c maturation heme lyase subunit CcmF [Haemophilus influenzae R2846] gb|ADO96636.1| cytochrome c maturation heme lyase subunit CcmF [Haemophilus influenzae R2846] (648 aa) Score: 186 bits (473), Expect: 2.23926e-44 Length: 588, Idn/Pos/Gap = 161/265/72 (27%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LL-----------TLIII----FLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLL 450 L+ T ++I LI + L + I + + G + + L+ Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMLIAGFALPYFLQDKITVSSVLG----SMMTVIIVLLV 466 Query: 451 LFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL--N 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 467 LYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKVG 525 Query: 502 DNFII-----IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 +N I F + NY+ I+ P + LF+EKRFY + Sbjct: 526 ENAQIGRYDFKFAGVTDENGPNYIGGKAQIDISKDGQP------ETSLFAEKRFYTVSRM 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 580 SMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|YP_521333.1| cytochrome c-type biogenesis protein CcmF [Rhodoferax ferrireducens T118] gb|ABD67802.1| cytochrome c-type biogenesis protein CcmF [Rhodoferax ferrireducens T118] (657 aa) Score: 186 bits (473), Expect: 2.27694e-44 Length: 579, Idn/Pos/Gap = 142/262/61 (24%/45%/10%) Query: 68 DFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVKL 127 DFS+ +V + S+ P +Y++ +W +EGSL L + + + ++ F +L ++ Sbjct: 65 DFSVSYVAQHSNTKLPDIYRIAGVWGGHEGSLLL-WLMMLCTWMMAVSLFSRQLPEVM-- 121 Query: 128 TFFYNVYFILFNISFLSLTLLL-IFLRFDFFFNFT--VLEGNELNFLLQDINILIHPPLI 184 V +L ++ +++ LL + + + F + +G +LN LLQD ++ HPP++ Sbjct: 122 -----VSRVLGVLALVAVGFLLFMLITSNPFLRLSDIPADGRDLNPLLQDPGLVFHPPML 176 Query: 185 YISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTELGW 242 Y+ Y S+ F+ + L+ + + R W + I +GS WAY ELGW Sbjct: 177 YMGYVGMSVPFAFAIAALL-NGRLDAAWARWSRPWATAAWICLTIGIAMGSWWAYYELGW 235 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GG+WFWD VE S LPWL+ AL+HSL + K + R ++ L + + + ++G LVRS Sbjct: 236 GGWWFWDPVENASFLPWLVGTALIHSLAVTEKRGLFRNWTIILAITAFSLSLLGTFLVRS 295 Query: 303 GLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS--IFDLNNHYNFVYYIF 360 G+L SVH F P + L F V + + + + + + F L + F+ Sbjct: 296 GVLTSVHAFATDPKRGVFILLFLSVVVGGSLTLFAMRASKVRAGGAFALVSRETFLLVNN 355 Query: 361 LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINS--- 417 +L+ +L +P ++ N L +FN + F I+L ++ ++ S Sbjct: 356 VLLTTAAAAVLLGTLYPLIVDALNLGKLSVGPPYFNSV---FAPIMLPVLFFMVLGSFAR 412 Query: 418 W----------KLIFIFLGIIIIGGIRGF------PEIFLALYFFIYLLLFTLILIIKQK 461 W KL + + +++G F P + L+L +++L ++ I +Q Sbjct: 413 WKNDSVAELTKKLRPVAILSVLLGCSAPFLAGEWSPLVALSLTLVFWIVLASIQQIYRQL 472 Query: 462 FSFI-------------VYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFIIIF 508 + V H ++ + ++ Y E + +G T+ + D + Sbjct: 473 KDTVNWRSTPISFWGMHVAHIGIAVFVVGVTMVKAYENEKDVRMVVGDTVEVAD-YTFRL 531 Query: 509 RDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSIIYTNLM 568 + + NY + G+ + + + L EKR Y ++ T++ I +NL+ Sbjct: 532 TGIREVPGPNYTADQGDVEV------LRGGKLLKTLHPEKRTYFSSTMPMTETAIDSNLL 585 Query: 569 SDVYILLG---DGNFENGWYSRILFMPFISWFWLGGIFL 604 DVY+ LG +G + W R+ PFI W WLG + + Sbjct: 586 RDVYVSLGERLEGGDKPAWAMRVYHKPFIVWIWLGSLMM 624
ref|YP_005199294.1| c-type cytochrome biogenesis protein CcmF [Rahnella aquatilis CIP 78.65 = ATCC 33071] gb|AEX51154.1| c-type cytochrome biogenesis protein CcmF [Rahnella aquatilis CIP 78.65 = ATCC 33071] (657 aa) Score: 186 bits (473), Expect: 2.35421e-44 Length: 613, Idn/Pos/Gap = 160/273/84 (26%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DF++ +V S+ P Y++ W +EGS +++ ++ + + L Sbjct: 62 VVNDFTVAYVANNSNTRLPVYYRVAATWGAHEGS--------LLLWVLLLSCWTLAVALF 113 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL-IFLRFDFFF----NFTVLEGNELNFLLQDINILI 179 + V +L + ++ LL I L + F NF V +G++LN +LQDI ++ Sbjct: 114 SRRMPQDAVARVLAVMGMITGGFLLFILLTSNPFIRSLPNFPV-DGSDLNPVLQDIGLIF 172 Query: 180 HPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 HPPL+Y+ Y +S+ F+ + L+ + R W + I+LGS WAY Sbjct: 173 HPPLLYMGYVGFSVAFAFAIASLMAGRLDTAWARWSRPWTQAAWVFLTIGIVLGSAWAYY 232 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G Sbjct: 233 ELGWGGWWFWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLLGTF 292 Query: 299 LVRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYT-YFTSIFDLNNHYNFV 356 LVRSG+L SVH+F + P + I Y +V L++ K + +L++ +++ Sbjct: 293 LVRSGVLVSVHSFASDPARGMFILAYLVIVIGGSLLLYAFKGNSVRAPGRHELHSRESYL 352 Query: 357 YYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG--- 404 +L++ L +L P + K ++ FFN + LLL IG Sbjct: 353 LGNNVLLVAAMLVVLLGTLLPLIHKQLGLGSISIGEPFFNTMFTWLMAPLALLLGIGPLV 412 Query: 405 -----------------ILLTLIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFI 447 +L+TL++ L+ W L +G+ ++G L + I Sbjct: 413 RWRRDEPSKLWRRLGVALLVTLVLSILL-PWLLQDKIVGMTVVG--------LLMSVWVI 463 Query: 448 YLLLFTLILIIKQKFSF-------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL 500 L L L + SF H+ L + +T+ G F N+S+ + + + Sbjct: 464 VLTLMELHERATHRHSFWRGLTKLSRSHWGMVLGHLG-VAVTVIGIAFSQNYSVERDVRM 522 Query: 501 NDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFSEKRFY 551 + IFRD+ I NY N +T +N + V L +EKRFY Sbjct: 523 KSGDTVDIHDYHFIFRDVRDITGPNYTGGEANIDVT--------QNGKQVTTLHAEKRFY 574 Query: 552 LYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDS---- 607 + T++ I NL D+Y LG+ + W R+ + PF+ W WLGG+F+ Sbjct: 575 SVARSMMTEAAIDGNLARDLYAALGEEMDDGSWAVRLYYKPFVRWIWLGGLFMAAGGVLC 634 Query: 608 IIFSLFRCIKNFQ 620 I+ +R K + Sbjct: 635 ILDPRYRMSKKLK 647
ref|ZP_12248157.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3030-1] gb|EGW86029.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3030-1] (647 aa) Score: 186 bits (473), Expect: 2.45451e-44 Length: 588, Idn/Pos/Gap = 154/264/77 (26%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLN---LIGWFIASFSILLGSR 234 + HPPL+Y+ Y +S+ F+ F I + C RF L W + I+LGS Sbjct: 171 IFHPPLLYMGYVGFSVAFA--FAIASLLCGRLDSTYARFTRPWTLAAWISLTLGIVLGSA 228 Query: 235 WAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVII 294 WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + + Sbjct: 229 WAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCL 288 Query: 295 IGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNH 352 +G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 289 LGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSR 348 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFI 403 + + +L++ L +L P + K ++ FFN + LLL + Sbjct: 349 ESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGV 408 Query: 404 GILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALY 444 G L+ L+II I++ L + + + ++G LA+ Sbjct: 409 GPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMA 459 Query: 445 FFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 CWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_01058274.1| hypothetical protein MED193_02350 [Roseobacter sp. MED193] gb|EAQ43806.1| hypothetical protein MED193_02350 [Roseobacter sp. MED193] (666 aa) Score: 186 bits (473), Expect: 2.60213e-44 Length: 593, Idn/Pos/Gap = 158/258/71 (26%/43%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDF++ VVE S +P LYK+ W ++EGSL L + L ++ + +F + + Sbjct: 62 IVSDFTVRNVVENSHSLKPMLYKVAGTWGSHEGSLLL-WILILAVFGAGVAWFGSNIPAE 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 K +I ++ FL+ LLL FD F L+GN+LN LLQD+ + +HPPL+ Sbjct: 121 TKARTLSVQAWI--SVGFLTF-LLLTSNPFDRVFP-PPLDGNDLNPLLQDMGLAMHPPLL 176 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y Y +SI+FS + L+ + +R L W + I LGS WAY ELGWG Sbjct: 177 YFGYVGFSIVFSFAVAALLEGRVDPAWARWVRPWTLAAWVSLTAGIALGSWWAYYELGWG 236 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE +S +PWLL ALLHS ++ K + ++ L + + + ++G +VRSG Sbjct: 237 GWWFWDPVENVSFMPWLLGTALLHSAIVTEKRDAFKSWTILLAILTFSLSLLGTFIVRSG 296 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF--- 360 LL SVH F P + L V I + + Y + + + + Sbjct: 297 LLTSVHAFAVDPERGLYILGLLAVSIGGSLAL----YAWRAPEMEPGGLFRPISREAGLL 352 Query: 361 ---LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLIN- 416 L++ +LF +P +++ + + FFN FI ++L L++ + Sbjct: 353 VNNLILAAATGTVLFGTLYPLILEAVTGDKISVGPPFFNAA---FIPMMLALVVFMGLGP 409 Query: 417 --SWKLIFIF-----------LGIIIIGG----IRGFP-EIFLALYFFIYLLLFTLIL-- 456 SWK I L +I + G P +LA+ +LL TL Sbjct: 410 FLSWKRADIAGLLDRIRFVAVLAVIAASAAWYLLNGGPIMAYLAILGAAWLLFATLREWA 469 Query: 457 -------------------IIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 + + + H +M+ ++ T + E I+ F+ T Sbjct: 470 LRIRLFEVSLAESARRARNLPRASHGMTLAHAGVAVLMMGMIGSTGWKSEEIV-FAAPGT 528 Query: 498 LLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + F I F + NY++ G ++ + LF E+R+Y Sbjct: 529 EVTIAGFDITFEGAAKVQGPNYIADRGTLVVRRDG------ELVTTLFPERRYYPVAESQ 582 Query: 558 NTKSIIYTNLMSDVYILLGDG-----NFENGWYSRILFMPFISWFWLGGIFLL 605 T+S I + L D+Y + N W RIL+ P ++ W+G I L+ Sbjct: 583 TTESAIRSTLAGDLYTSIATPASDQVNNAGAWTLRILYEPLVNLIWIGSILLV 635
ref|ZP_01792122.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae PittHH] gb|EDK10214.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae PittHH] (648 aa) Score: 186 bits (473), Expect: 2.73572e-44 Length: 588, Idn/Pos/Gap = 161/265/72 (27%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LL-----------TLIII----FLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLL 450 L+ T ++I LI + L + I + + G + + L+ Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMLIAGFALPYFLQDKITVSSVLG----SMMTVIIVLLV 466 Query: 451 LFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL--N 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 467 LYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKVG 525 Query: 502 DNFII-----IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 +N I F + NY+ I+ P + LF+EKRFY + Sbjct: 526 ENAQIGRYDFKFAGVTDENGPNYIGGKAQIDISKDGQP------EASLFAEKRFYTVSRM 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 580 SMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_10139149.1| cytochrome C-type biogenesis protein CcmF [Fluoribacter dumoffii Tex-KL] (649 aa) Score: 186 bits (472), Expect: 2.75864e-44 Length: 598, Idn/Pos/Gap = 163/272/84 (27%/45%/14%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINK------ 120 DFS+++V+ SS++ P YKL +W +EGS+ L ++ + ++T + F + Sbjct: 64 DDFSVIYVLSNSSISLPWFYKLCAVWGGHEGSMLL--WVSILSFWTLLVAFCSSGLDKEM 121 Query: 121 LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLE--GNELNFLLQDINIL 178 T ++ + + ++ FILF L+ F F VL+ G +LN LLQD L Sbjct: 122 RTRVLVVLGWLSIGFILF----------LLSTSNPFLRQFQVLDSSGRDLNPLLQDPGFL 171 Query: 179 IHPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAY 237 HPP++Y+ Y +S+ F+ + L K + R L W + I LGS WAY Sbjct: 172 FHPPMLYMGYVGFSVAFAFALAALWAGKVEASWSKWTRPWTLAAWCCLTAGITLGSWWAY 231 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE S +PWL+ ALLHSL + + + ++ L +A + + +IG Sbjct: 232 RELGWGGWWFWDPVENASFMPWLVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSLSLIGT 291 Query: 298 ILVRSGLLQSVHTFVNSPNFLIIFLYFFL-VFIFILIVILLKKYTYFT----------SI 346 LVRSG+L SVH F P + L F L V L++ L + T + S Sbjct: 292 FLVRSGVLTSVHAFAVDPQRGLYILGFLLFVIGGSLLLFLFRAQTLHSGNNPSPISRESA 351 Query: 347 FDLNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGIL 406 LNN +FL+VI+ L +L +P +++ L +FN + F+ ++ Sbjct: 352 LLLNN-------VFLVVIM--LTVLMGTIYPLIVEGLGLGKLSVGAPYFNSV---FVPLM 399 Query: 407 LTLIIIFLI------NS----------WKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLL 450 + L+++ I NS WK+ F+ L + ++ + + L+ Y + L Sbjct: 400 VPLMVLMGIGIHLRWNSDRGRVVLKKLWKMAFLSLLLPLLLLVATSRQFNLSAYIGLILA 459 Query: 451 LFTLILIIKQKF----------------SFIVYHFNFFFIMLSLLLITIYGEEFILNFSI 494 + ++ ++ + I+ H ++ + + T YG + + Sbjct: 460 FWVILSTLQAAYRRIYDRGLHQMGQAYWGMILAHLGVATTVIGIAVSTAYGVQDDVQMEP 519 Query: 495 GKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQ 554 G+ + L D + + F + NY T F I+ Y+ +++ EKR Y Sbjct: 520 GEKVALLD-YSVEFMSQEPLSGPNYKGTKAQFKIS-------YKGKSKLIYPEKRLYTIG 571 Query: 555 SLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 + T+S I D+YI LG+ N W R+ + P I W W GG +L F+L Sbjct: 572 QMAMTESAIDVTPFRDIYIALGELLSTNSWSVRLYYKPLIRWIWSGGFMILAGGFFAL 629
ref|YP_004898573.1| cytochrome c heme lyase subunit CcmF [Pelagibacterium halotolerans B2] gb|AEQ50823.1| cytochrome c heme lyase subunit CcmF [Pelagibacterium halotolerans B2] (660 aa) Score: 186 bits (472), Expect: 2.82856e-44 Length: 597, Idn/Pos/Gap = 176/263/72 (29%/44%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 + DFS+ VVE S QP LYK+ + W N+EGS+ L + ++ + F L + Sbjct: 62 VDDFSVRLVVEHSHSLQPMLYKITSTWGNHEGSMLL-FVFTLTLFGAAVAAFGRNLPNEL 120 Query: 126 KLTFFYNVYFILFNISFLSLTLLLIFLRFDFF-FNFTVLEGNELNFLLQDINILIHPPLI 184 K N ++ S L F R D FN G ELN +LQDI + IHPPL+ Sbjct: 121 KTLVLSNQGLMVGAFSGFVLFTSNPFWRLDPAPFN-----GTELNPVLQDIGLAIHPPLL 175 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y+ Y +SI FS + L+ + +R L W + I +GS WAY ELGWG Sbjct: 176 YLGYVGFSICFSFAVAALVSGRIDAAWARWVRPWTLASWAFLTLGIAMGSYWAYYELGWG 235 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE S +PWL ALLHS ++ K +++ ++FL + + + ++G LVRSG Sbjct: 236 GWWFWDPVENASFMPWLAGTALLHSAIVMEKRNALKIWTIFLAIITFSLSLLGTFLVRSG 295 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFD-----LNNH 352 +L SVH+F + P II L FI F L L+ F I LNN Sbjct: 296 ILTSVHSFASDPTRGIIILAMLAAFIGGAFTLFALRASSLRHGGLFAPISREGALILNNL 355 Query: 353 Y-NFVYYIFLLVILYFLY---------------------------LLFVLYFPFLIKCYN 384 + + L+ LY L LL + + PFL Sbjct: 356 FLSAATAGVLIGTLYPLVLEALTGARITVGAPFFDLTFGALMVPLLLLIPFGPFLAWKRG 415 Query: 385 DNALLFSFG--FFNKILLLFIGILLTLII-IFLINSWKLIFIFLGI---IIIGGIRGFPE 438 D L + G F I++ ++LTLI+ FL L I LGI +++G I E Sbjct: 416 D---LVAVGQRLFAAIVVT---VILTLIVFGFLGFPISLAPIGLGIGIWVMVGPIAELAE 469 Query: 439 ---IFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIG 495 I A + + L L K +S + HF ++ ++ T + E + + G Sbjct: 470 RAAIGRAKWAQSWQRLKGL---PKTAWSTAIAHFGVGVSVIGIVCATAFQTENVTSMRAG 526 Query: 496 KTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 +T+ + + I ++ H N+ + G FLI P + L SE+R Y Sbjct: 527 ETVDIA-GYSITYQGEEHFEGPNFTADRGTFLI---DAPWGRD---RQLTSERRVYGVSG 579 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 T++ I T S +YI G+ +G R+ PF+ WLG + + + SL Sbjct: 580 TPTTEAGIATYGFSQMYIQFGERFGTDGRVVRLWHKPFVLLIWLGTVLMAGAGFLSL 636
ref|YP_001251700.1| cytochrome c-type biogenesis protein CcmF [Legionella pneumophila str. Corby] gb|ABQ56354.1| cytochrome c-type biogenesis protein CcmF [Legionella pneumophila str. Corby] (650 aa) Score: 186 bits (472), Expect: 2.87616e-44 Length: 590, Idn/Pos/Gap = 168/264/64 (28%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+ DFS+ +V+ SS+ P YK +W +EGS+ L + + + +F + L Sbjct: 62 LMDDFSVNYVLNNSSLLLPWFYKFCAVWGGHEGSMLL-WVAILSFWMILVCFFSSSLDTE 120 Query: 125 VKLTFFYNVYFILFNISFLSLT--LLLIFLRFDFFFNFTVL--EGNELNFLLQDINILIH 180 ++ +L + +LS+ L L+ F F VL +G +LN LLQD L H Sbjct: 121 MRAR-------VLVILGWLSIGFILFLLMTSNPFLRQFQVLNTQGRDLNPLLQDPGFLFH 173 Query: 181 PPLIYISYASYSIIFSISFTIL-IIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PP++Y+ Y + + F+ + L K + R L W + I LGS WAY E Sbjct: 174 PPMLYMGYVGFCVAFAFAIAALWAGKVETSWSKWTRPWTLAAWCCLTAGITLGSWWAYRE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL+ ALLHSL + + + ++ L +A + + +IG L Sbjct: 234 LGWGGWWFWDPVENASFMPWLVGTALLHSLAVTEQRQQFKAWTMLLAIAAFSLSLIGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY- 358 VRSG+L SVH F P + L F L I + + L + +N H + Sbjct: 294 VRSGVLTSVHAFAVDPQRGLYILGFLLFVIGGSLTLFL----FRAQTLQVNKHPGLLSRE 349 Query: 359 -------IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 +FL+VI+ L +L +P L++ L +FN + + + LL L+ Sbjct: 350 SALLLNNVFLVVIM--LTVLMGTVYPLLVEGLGLGKLSVGAPYFNAVFVPLMIPLLLLMG 407 Query: 412 IFLINSW----------KLIFIFLGIIIIGGIRGF---PEI----FLALYFFIYLLLFTL 454 + + W KL IFL +I+ I F EI L L ++LL T Sbjct: 408 LGVRLKWQNDCWRDVFGKLNRIFLLSLILPVILLFCTSTEIHLTALLGLILAFWVLLSTA 467 Query: 455 -----------ILIIKQKF-SFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + + Q + ++ H ++ + + + YG + + S GK + L D Sbjct: 468 NAAYHKVRDRGVTGVGQAYWGMVLAHCGVAATVIGIAVSSAYGVQDDVRMSPGKQVNLLD 527 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + I F + + NY T F I Y+N +F EKR Y + T+S Sbjct: 528 -YQIGFINQTPLNGPNYKGTRAEFSIQ-------YQNKSRQIFPEKRVYTIGQMPMTESA 579 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 I D+YI LG+ E+ W RI + P + W W GG +L + +L Sbjct: 580 IDVTPFRDIYIALGEPLSEDAWSVRIYYKPLVRWIWAGGFMILAGGVLAL 629
ref|ZP_11407683.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. Bsw20308] gb|EKS11818.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. Bsw20308] (656 aa) Score: 186 bits (472), Expect: 2.94907e-44 Length: 586, Idn/Pos/Gap = 156/258/70 (26%/44%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 DF++ +V SS P YK+ + W +EG++ L +Q + + L +++ Sbjct: 64 DDFTVSYVAYHSSSTLPWYYKITSTWGGHEGAILLWLVMQ-AGWTAVVAARSKSLPWVLR 122 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLIYI 186 + F+ + F+ TLLL F+ + +EG +LN LLQD ++IHPPL+Y+ Sbjct: 123 ARVLGVLGFL--GVGFMMYTLLLSS-PFERLLPYFPVEGRDLNPLLQDPGMIIHPPLLYM 179 Query: 187 SYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWGGF 245 Y S+ FS + L+ K R + W + I +GS WAY+ELGWGG+ Sbjct: 180 GYVGLSVAFSFAIAALLTGKLDNTWAKWSRPWTMTAWGFLTLGITIGSWWAYSELGWGGW 239 Query: 246 WFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSGLL 305 WFWD VE SL+PWL++ ALLHSL + K + + ++ L +A + + ++G +VRSG++ Sbjct: 240 WFWDPVENASLMPWLVATALLHSLSVTEKRGVFKSWTVLLAIAAFSLSLLGTFIVRSGII 299 Query: 306 QSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL--- 362 SVH F P+ + F L F+ I++ L Y S Y V L Sbjct: 300 VSVHAFATDPDRGL----FILAFLGIVVGGGLALYALRVSQVHSEGRYKLVSREVALWLN 355 Query: 363 ---VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILLLFIGILLTLI--IIFL 414 +++ L +L P + K ++ FFNK I+L+ IL+ + + + Sbjct: 356 NIFLVVATLIVLLGTLLPMVHKEMGLGSISIGEPFFNKMFAIILVPFAILMGIGPFLRWK 415 Query: 415 INSW-----KLIFIFLGIIIIGGIRGF-------PEIFLALYFFIYLLLFTLILIIKQK- 461 N W K++ L ++I F P LA +++ + T I I + Sbjct: 416 QNKWAFLQNKILMGVLASVVITCAWLFSSYDLVKPLTLLATTLAVWIAISTGIDIYTKAV 475 Query: 462 ----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 ++ ++ H F++ + L + Y E ++ G T+ LN + Sbjct: 476 VHGTLKEGLKRLGVSYWAMVLGHIGIAFVIAGVTLTSAYSVERDVSMKQGDTVQLN-QYE 534 Query: 506 IIFRDLNHIWSTNYLSTYG-------NFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 F + I NY G N L+T H +EKR Y Sbjct: 535 YRFDGVKAIRGPNYSGHAGVVSVLKNNELVTRLH-------------AEKRKYDIGMQFM 581 Query: 559 TKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I D+Y+ LG+ + W RI PF+ W W+GG+ + Sbjct: 582 TEAAIDAGFTRDLYLALGEQLSQGAWSLRIYHKPFVRWMWIGGVLI 627
ref|ZP_01785967.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae R3021] gb|EDJ91889.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae R3021] (648 aa) Score: 186 bits (472), Expect: 3.04915e-44 Length: 588, Idn/Pos/Gap = 161/265/72 (27%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LL-----------TLIII----FLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLL 450 L+ T ++I LI + L + I + + G + + L+ Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMLIAGFALPYFLQDKITVSSVLG----SMMTVIIVLLV 466 Query: 451 LFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL--N 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 467 LYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKVG 525 Query: 502 DNFII-----IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 +N I F + NY+ I+ P + LF+EKRFY + Sbjct: 526 ENAQIGRYDFKFAGVTDENGPNYIGGKAQIDISKDGQP------EASLFAEKRFYTVSRM 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 580 SMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_13865345.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12B] gb|EHX25669.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12B] (647 aa) Score: 186 bits (472), Expect: 3.0747e-44 Length: 588, Idn/Pos/Gap = 154/264/77 (26%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLN---LIGWFIASFSILLGSR 234 + HPPL+Y+ Y +S+ F+ F I + C RF L W + I+LGS Sbjct: 171 IFHPPLLYMGYVGFSVAFA--FAIASLLCGRPDSTYARFTRPWTLAAWIFLTLGIVLGSA 228 Query: 235 WAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVII 294 WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + + Sbjct: 229 WAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCL 288 Query: 295 IGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNH 352 +G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 289 LGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSR 348 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFI 403 + + +L++ L +L P + K ++ FFN + LLL + Sbjct: 349 ESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGV 408 Query: 404 GILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALY 444 G L+ L+II I++ L + + + ++G LA+ Sbjct: 409 GPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMA 459 Query: 445 FFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 CWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_01789963.1| cytochrome C-type biogenesis protein [Haemophilus influenzae PittAA] gb|EDK08689.1| cytochrome C-type biogenesis protein [Haemophilus influenzae PittAA] (648 aa) Score: 186 bits (472), Expect: 3.15263e-44 Length: 589, Idn/Pos/Gap = 159/262/74 (26%/44%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LLT---------------LIIIFLINSWKLIFIFLGIIIIGGIRG-FPEIFLALYFFIYL 449 L+ + + LI + L + I + + G + +AL L Sbjct: 411 LVKWRRDQFSAIRTPVVICVFVMLIAGFALPYFLQDKITVSSVLGSMMTVIIAL-----L 465 Query: 450 LLFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN- 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 466 ALYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFAGVTDANGPNYIGGKAQIDISKDGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_09243786.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20495] dbj|GAA80035.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20495] (656 aa) Score: 186 bits (472), Expect: 3.17905e-44 Length: 586, Idn/Pos/Gap = 156/258/70 (26%/44%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 DF++ +V SS P YK+ + W +EG++ L +Q + + L +++ Sbjct: 64 DDFTVSYVAYHSSSTLPWYYKITSTWGGHEGAILLWLVMQ-AGWTAVVAARSKSLPWVLR 122 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLIYI 186 + F+ + F+ TLLL F+ + +EG +LN LLQD ++IHPPL+Y+ Sbjct: 123 ARVLGVLGFL--GVGFMMYTLLLSS-PFERLLPYFPVEGRDLNPLLQDPGMIIHPPLLYM 179 Query: 187 SYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWGGF 245 Y S+ FS + L+ K R + W + I +GS WAY+ELGWGG+ Sbjct: 180 GYVGLSVAFSFAIAALLTGKLDNTWAKWSRPWTMTAWGFLTLGITIGSWWAYSELGWGGW 239 Query: 246 WFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSGLL 305 WFWD VE SL+PWL++ ALLHSL + K + + ++ L +A + + ++G +VRSG++ Sbjct: 240 WFWDPVENASLMPWLVATALLHSLSVTEKRGVFKSWTVLLAIAAFSLSLLGTFIVRSGII 299 Query: 306 QSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL--- 362 SVH F P+ + F L F+ I++ L Y S Y V L Sbjct: 300 VSVHAFATDPDRGL----FILAFLGIVVGGGLALYALRVSQVHSEGRYKLVSREVALWLN 355 Query: 363 ---VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILLLFIGILLTLI--IIFL 414 +++ L +L P + K ++ FFNK I+L+ IL+ + + + Sbjct: 356 NIFLVVATLIVLLGTLLPMVHKEMGLGSISIGEPFFNKMFAIILVPFAILMGIGPFLRWK 415 Query: 415 INSW-----KLIFIFLGIIIIGGIRGF-------PEIFLALYFFIYLLLFTLILIIKQK- 461 N W K++ L ++I F P LA +++ + T I I + Sbjct: 416 QNKWAFLQNKILMGVLASVVITCAWLFSSYDLVKPLTLLATTLAVWIAISTGIDIYTKAA 475 Query: 462 ----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 ++ ++ H F++ + L + Y E ++ G T+ LN + Sbjct: 476 VHGTLKEGLKRLGVSYWAMVLGHIGIAFVIAGVTLTSAYSVERDVSMKQGDTVQLN-QYE 534 Query: 506 IIFRDLNHIWSTNYLSTYG-------NFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 F + I NY G N L+T H +EKR Y Sbjct: 535 YRFDGVKAIRGPNYSGHAGVVSVLKNNELVTRLH-------------AEKRKYDIGMQFM 581 Query: 559 TKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I D+Y+ LG+ + W RI PF+ W W+GG+ + Sbjct: 582 TEAAIDAGFTRDLYLALGEQLSQGAWSLRIYHKPFVRWMWIGGVLI 627
ref|ZP_05849649.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae NT127] gb|EEW78938.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae NT127] (648 aa) Score: 186 bits (472), Expect: 3.31448e-44 Length: 590, Idn/Pos/Gap = 163/268/76 (27%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ ++V S+ P Y+L +W ++EGSL L + + + + + L+ Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLL--------WIWLLAVWSSAVALLS 114 Query: 126 KLTFFYNVYFILFNISFLSLTLLL--IFLRFDF---FFNFTVLEGNELNFLLQDINILIH 180 K V +L + +S+ +L +F F F NF V +G ELN +LQD+ ++ H Sbjct: 115 KHLPQEAVARVLGIMGIISVGFVLFVLFTSNPFTRTFPNFPV-DGKELNPMLQDVGLIFH 173 Query: 181 PPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PPL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY E Sbjct: 174 PPLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G L Sbjct: 234 LGWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFL 293 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYY 358 VRSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 294 VRSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRE 349 Query: 359 IFLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 350 SMLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIG 409 Query: 405 ILL-----------TLII----IFLINSWKLIFIFLGIIIIGGIRG-FPEIFLALYFFIY 448 L+ T ++ I LI + L ++ I + + G + +AL Sbjct: 410 PLVKWRRDQFSAIRTPVVISVFIMLIAGFALPYLLQDKITVSSVLGSMMTVIIAL----- 464 Query: 449 LLLFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN 501 L L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 465 LALYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMK 523 Query: 502 -------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQ 554 + F + NY+ I+ P + LF+EKRFY Sbjct: 524 VGESAQIGRYDFKFAGVTDENGPNYIGGKAQIDISKDGQP------EASLFAEKRFYTVS 577 Query: 555 SLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 578 RMSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_07774327.1| Cytochrome c-type biogenesis protein ccmF [Pseudomonas fluorescens WH6] gb|EFQ64542.1| Cytochrome c-type biogenesis protein ccmF [Pseudomonas fluorescens WH6] (661 aa) Score: 186 bits (472), Expect: 3.42697e-44 Length: 575, Idn/Pos/Gap = 151/260/58 (26%/45%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTF-INYFINKLTL 123 + DFS+ +V S+ P YK +W +EGSL L + + +TF ++ F +L Sbjct: 67 MTDDFSVAYVANNSNSALPWYYKFSAVWGAHEGSLLL--WALILGGWTFAVSVFSRQLPQ 124 Query: 124 IVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPL 183 ++ + I +I FL L L++ F G++LN LLQDI +++HPP+ Sbjct: 125 VMLARVLAVMGMI--SIGFL-LFLIMTSNPFSRILPQIPANGHDLNPLLQDIGLIVHPPM 181 Query: 184 IYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ F+ ++ + + R ++ W I LGS WAY ELG Sbjct: 182 LYMGYVGFSVAFAF-AIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG 240 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L +A + + ++G LVR Sbjct: 241 WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVR 300 Query: 302 SGLLQSVHTFVNSPN---FLIIFLYFFL---VFIFILIVILLKKYTYFTSIFDLNNHYNF 355 SG+L SVH F + P F++IFL F + + +F L ++K F+L + Sbjct: 301 SGVLTSVHAFASDPARGVFILIFLLFVVGGSLTLFALRAPVVKSQVG----FNLWSRETL 356 Query: 356 VYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLI 415 + L++++ +L +P ++ + L +FN + + +G+L+ ++ + ++ Sbjct: 357 LLGNNLVLVVTASMILLGTLYPLVLDALSGAKLSVGPPYFNALFIPLMGLLMGVMAVGVL 416 Query: 416 NSWK----------LIFIFLGIIIIGGIRG-----FPEIFLALYFFIYLLLFTLILIIKQ 460 WK L+ + LG + + I G F LA + +L + I Sbjct: 417 VRWKDTPVKWLAGMLMPVLLGSVALAVIAGVAYGDFNWAVLATFMLAAWVLLAGVRDIAD 476 Query: 461 K-----------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDN 503 K + + H L ++L + E L + G+++ L Sbjct: 477 KTRHKGLIKGLPTLTRSYWGMQIAHLGIAVCALGVVLSSQNSAERDLRLAPGESMDLA-G 535 Query: 504 FIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSII 563 + IF H N+ S G + N + VL EKR Y QS + T++ I Sbjct: 536 YQFIFEGAKHFEGPNFTSDKGTVRVVRNGNEIA------VLHPEKRLYTVQSSMMTEAGI 589 Query: 564 YTNLMSDVYILLGDGNFENGWYSRILFMPFISWFW 598 D+Y+ LG+ E W R+ PF+ W W Sbjct: 590 DAGFTRDLYVALGEPLGEGAWAVRVHVKPFVRWIW 624
ref|ZP_01788194.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae 3655] gb|EDJ93896.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae 3655] (648 aa) Score: 186 bits (472), Expect: 3.51383e-44 Length: 589, Idn/Pos/Gap = 164/267/74 (27%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE SL+PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSLMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LL-----------TLIII----FLINSWKLIFIFLGIIIIGGIRG-FPEIFLALYFFIYL 449 L+ T ++I LI + L + I + + G + +AL L Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMLIAGFALPYFLQDKITVSSVLGSMMTVIIAL-----L 465 Query: 450 LLFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL-- 500 L+ L + F V H+ L + + T++G F NFS+ + + + Sbjct: 466 ALYELQQRATHREPFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKV 524 Query: 501 NDNFIIIFRDLNHIWST-----NYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 +N I D + T NY+ I+ P + LF+EKRFY Sbjct: 525 GENAQIGRYDFKFVGVTDENGPNYVGGKAQIDISKDGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_16123054.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 1485-80] gb|EJZ65552.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 1485-80] (647 aa) Score: 186 bits (471), Expect: 3.6029e-44 Length: 587, Idn/Pos/Gap = 152/265/75 (25%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVCVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ ++ S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAERGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALCISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_10413423.1| hypothetical protein A936_16077 [Enterobacter sp. Ag1] gb|EJF29996.1| hypothetical protein A936_16077 [Enterobacter sp. Ag1] (651 aa) Score: 186 bits (471), Expect: 3.6029e-44 Length: 577, Idn/Pos/Gap = 151/253/60 (26%/43%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINK 120 +++DFS+L+V S+ P Y++ W +EGSL L + F + T + Sbjct: 62 VVNDFSVLYVANNSNTELPVWYRVAATWGAHEGSLMLWVLMMSGWTFAVALTGRSMPKED 121 Query: 121 LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFT--VLEGNELNFLLQDINIL 178 ++ + N F+LF +IF F LEG +LN LLQDI ++ Sbjct: 122 HARVLAVMGMINFGFLLF----------IIFTSNPFIRTLPDYPLEGRDLNPLLQDIGLI 171 Query: 179 IHPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAY 237 +HPPL+Y+ Y +S+ F+ S L+ + R L W + I+LGS WAY Sbjct: 172 LHPPLLYMGYVGFSVAFAFSIAALLGGRLDSAWARWTRPWTLAAWAFLTVGIVLGSAWAY 231 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE S +PWL AL+HSL + K + ++ L ++ + + ++G Sbjct: 232 YELGWGGWWFWDPVENASFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAISAFSLCLLGT 291 Query: 298 ILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIF--DLNNHYNF 355 LVRSG+L SVH+F + P + L F +V I +++ K + S DL + +F Sbjct: 292 FLVRSGVLVSVHSFASDPARGMFILAFLVVVIGGSLLLYAVKGSKVRSRVSNDLWSRESF 351 Query: 356 VYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLI 415 + +L+I L +L P + K ++ FFN + + ++ I + Sbjct: 352 LLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTALMAPFALMLGIGPL 411 Query: 416 NSW------KLIFIFLGIIIIG---------GIRGFPEIFLALYFFIYLLLFTLILI-IK 459 W KL L ++I ++ E + + + +F L L+ + Sbjct: 412 VRWRRDEPGKLRKHLLAAVVITLILSLLLPWLMQDSVEAMTVVGLLMAVWVFVLALMEVY 471 Query: 460 QKFSF-----------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFII-- 506 Q+ + H+ L L +T+ G F ++S+ + + + I Sbjct: 472 QRATHRHGFWDGLRKIPASHWGMVSAHLG-LAVTVVGIAFSQSYSVERDVRMKSGDSIDI 530 Query: 507 -----IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKS 561 +FR++ I NY G +T P + L +EKRFY + T++ Sbjct: 531 HQYHFVFREVRDITGPNYRGGVGVIDVTRHGKP------EATLHAEKRFYNSNRAMMTEA 584 Query: 562 IIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFW 598 I D+Y LG+ + W R+ + PF+ W W Sbjct: 585 AIDGGFTRDLYAALGEELDDGSWAVRLYYKPFVRWIW 621
ref|ZP_05919613.1| cytochrome c-type biogenesis protein CcmF [Pasteurella dagmatis ATCC 43325] gb|EEX50887.1| cytochrome c-type biogenesis protein CcmF [Pasteurella dagmatis ATCC 43325] (653 aa) Score: 186 bits (471), Expect: 3.98231e-44 Length: 584, Idn/Pos/Gap = 154/269/64 (26%/46%/10%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ ++V S+ N P Y+L +W ++EGSL L + ++ + +F +L Sbjct: 63 VNDFSVQYIVNNSNTNLPLHYRLSAVWGSHEGSLLL-WIWLLTLWGAAVAFFSKQLPQEA 121 Query: 126 KLTFFYNVYFILFNISFLSLTLLLIFL----RFDFFFNFTVLEGNELNFLLQDINILIHP 181 V +L + +S+ L+ L FD F ++G ELN LLQD+ ++ HP Sbjct: 122 -------VARVLGIMGIISIGFLVFVLFTSNPFDRTFPDLPVDGKELNPLLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ + R + W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFALASLMTGRLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PW+ ALLHSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENASFMPWIAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLIVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 LL+ L + F P + K + FF+++ L+ + L+ I Sbjct: 351 MLLLNNILLMTALSVVFLGTLLPLVHKQLGLGTISVGAPFFDQMFLIIMIPFSLLLGIGP 410 Query: 415 INSWKL---------IFIFLGIIIIGGIRGFP-----EIFLALYFFIYLLLFTLILIIKQ 460 + W+ + + L I++I G P +I ++ + +++F IL + + Sbjct: 411 LVKWRRDEFSEIRTPVIVSLVIMLIAGF-ALPYFLQDKITVSSVLGVMMVVFIAILSLYE 469 Query: 461 KFSFIVYHFNFFFIMLSL-------------LLITIYGEEFILNFSIGKTLLLN------ 501 ++ +FF + L + ++++G F N+SI + + +N Sbjct: 470 LQQRAIHRHSFFIGLTKLSRSHWGMVIAHLGVAMSVWGIAFSQNYSIERDVRMNIGDSVN 529 Query: 502 -DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTK 560 ++ F+ + NYL I+ I+ VLF+EKRFY + T+ Sbjct: 530 IADYQFTFKGITEANGPNYLGGQAQVDISK------NGKIEAVLFAEKRFYTVSKMTMTE 583 Query: 561 SIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + I D+Y+ LG+ + W R+ + PFI W W GG+F+ Sbjct: 584 AAIDWGFSRDIYVALGENLGGDSWALRLYYKPFIRWIWFGGVFM 627
ref|ZP_13497868.1| heme lyase, CcmF subunit, partial [Escherichia coli O157:H43 str. T22] gb|EHS65869.1| heme lyase, CcmF subunit, partial [Escherichia coli O157:H43 str. T22] (640 aa) Score: 186 bits (471), Expect: 4.22183e-44 Length: 588, Idn/Pos/Gap = 154/264/77 (26%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 55 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 114 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 115 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 163 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLN---LIGWFIASFSILLGSR 234 + HPPL+Y+ Y +S+ F+ F I + C RF L W + I+LGS Sbjct: 164 IFHPPLLYMGYVGFSVAFA--FAIASLLCGRLDSTYARFTRPWTLAAWIFLTLGIVLGSA 221 Query: 235 WAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVII 294 WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + + Sbjct: 222 WAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCL 281 Query: 295 IGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNH 352 +G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 282 LGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSR 341 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFI 403 + + +L++ L +L P + K ++ FFN + LLL + Sbjct: 342 ESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGV 401 Query: 404 GILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALY 444 G L+ L+II I++ L + + + ++G LA+ Sbjct: 402 GPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMA 452 Query: 445 FFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 453 CWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGD 512 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 513 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 566 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 567 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 613
ref|YP_002548980.1| cytochrome c-type biogenesis protein CcmF [Agrobacterium vitis S4] gb|ACM35974.1| cytochrome c-type biogenesis protein CcmF [Agrobacterium vitis S4] (667 aa) Score: 186 bits (471), Expect: 4.25721e-44 Length: 586, Idn/Pos/Gap = 162/259/62 (27%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L+SDFS+L + S P++Y+ +W N+EGS+ L + L ++ + F + L Sbjct: 62 LVSDFSLLNAYQNSHSLMPAIYRFSAVWGNHEGSMML-WLLILTLFSALVALFGSNLPDR 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 +K NV + IS + +LI N EG +LN +LQD + IHPPL+ Sbjct: 121 LK----ANVLGVQAWISTAFILFILITSNPFIRLNPAPAEGQDLNPVLQDPGLAIHPPLL 176 Query: 185 YISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELGW 242 Y+ Y +S+ FS + LI + + +R L W + I +GS WAY ELGW Sbjct: 177 YLGYVGFSVCFSFAIAALI-DGRIDAAWARWVRPWTLAAWTFLTAGIAMGSYWAYYELGW 235 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GG+WFWD VE S +PWL ALLHS L+ K +++ ++ L + + + ++G LVRS Sbjct: 236 GGWWFWDPVENASFMPWLAGTALLHSALVMEKRDALKIWTVLLAILTFSLSLLGTFLVRS 295 Query: 303 GLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFDLNNHYNFV 356 G+L SVH F P+ I L ++FI F+L LK F I + V Sbjct: 296 GVLTSVHAFATDPSRGIFILAILILFIGGALFLFMLRAPHLKAGGLFQPI---SREGALV 352 Query: 357 YYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLIN 416 +L + L+ LY P L++ + FFN L + LL + + Sbjct: 353 LNNLILTVSTATVLIGTLY-PLLLETLTGEKISVGAPFFNLTFGLLMIPLLVAVPFGPML 411 Query: 417 SWK----------------------LIFIFL---GII--IIGGIRGFPEIFLALYFFIYL 449 +WK L+F +L G + ++G GF +F AL Y Sbjct: 412 AWKRGDLLGALQRLYLVAVLAFLVGLVFYYLQNGGPVLSVLGLAAGFFLMFGALADLAYR 471 Query: 450 LLF----------TLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLL 499 F LI + + F + HF +L ++ +T + E ++ G+T+ Sbjct: 472 SAFGKQTASVAFRRLIGLPRSAFGTALAHFGLGVTVLGIVAVTTFESEMVVEMKPGQTVE 531 Query: 500 LNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 F + + L NY G+F I + ++S KR Y + + T Sbjct: 532 AG-GFSLTYDGLRSAKGPNYTEDRGHFTIRRGG------VSEGDVWSSKRLYTARRMPTT 584 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 ++ I + S +Y+ LGD + G RI + P+I W G + ++ Sbjct: 585 EAGIRSFGFSQLYVSLGDAMADGGMVVRIWWKPWILCIWGGALVMM 630
ref|ZP_09920381.1| cytochrome c-type biogenesis protein CcmF [Glaciecola punicea DSM 14233 = ACAM 611] dbj|GAB55514.1| cytochrome c-type biogenesis protein CcmF [Glaciecola punicea DSM 14233 = ACAM 611] (684 aa) Score: 186 bits (471), Expect: 4.40169e-44 Length: 585, Idn/Pos/Gap = 157/275/61 (26%/47%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 + +FS++ V + S+ P YK+ +W ++EGS FL +++ F+ + + Sbjct: 62 MTDNFSVINVAQNSNSQLPWYYKMTAVWGSHEGS-----FLLWVLIFSIWTLAVALFSKG 116 Query: 125 VKLTFFYNVYFILFNISFL-SLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPL 183 + V +L +SF L +L+ FD F ++G +LN LLQD ++IHPPL Sbjct: 117 IPQAMVARVLSVLGMVSFSFYLFMLITSNPFDSMLPFFPVDGRDLNPLLQDFGMIIHPPL 176 Query: 184 IYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ F+ +I K + R + W + I LGS WAY ELG Sbjct: 177 LYMGYVGFSVAFAF-AIAALIGGKLDSTWARWSRPWTIAAWSFLTVGISLGSWWAYYELG 235 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE S +PWL+ AL+HSL + K I + ++ L +A + + ++G LVR Sbjct: 236 WGGWWFWDPVENASFMPWLVGTALMHSLAVTEKRKIFQSWTVLLAIAAFSLSLLGTFLVR 295 Query: 302 SGLLQSVHTFVNSPNFLIIFLYFFLVFI--FILIVILLKKYTYFTSIFDLNNHYNFVYYI 359 SG+L SVH+F N P+ + L +V I +L+ + T +D+ + + Sbjct: 296 SGVLVSVHSFANDPDRGLFILGLLVVVIGGSLLLYAVRASQLKSTGRYDMFSREMMLMGN 355 Query: 360 FLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWK 419 +L+I + +L FP + K + FFN++ L I + + I + WK Sbjct: 356 NVLLIAATIVVLLGTLFPLVHKEIGLGTISIGAPFFNQMFTLLIVPFVLFLGIGPLTRWK 415 Query: 420 ----------LIFIFLGIIIIG-------GIRGFPE-IFLALYFFIYLLLFTLILIIKQK 461 LIF F+ + G R + + L + F+I + + IL ++Q+ Sbjct: 416 SQKPEMLRNQLIFAFILAVSAGFLINMSYDERTYMAWLGLTMSFWI---IISSILEVRQR 472 Query: 462 ---------------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL 500 + ++ H F ++ + L++ Y E + G+ + + Sbjct: 473 VTSNTRDEPLWPSLKRLSRSHWGMVLGHLGFAVTLIGITLVSNYEMERDVKMVPGQRIQI 532 Query: 501 NDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTK 560 D + ++F + I NY+S G F + F N +++ EKRFY Q + T+ Sbjct: 533 AD-YEVLFTGMKEIQGPNYISDMGVFDV--FKNGKLVSHLE----PEKRFYSVQQMSMTE 585 Query: 561 SIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 + I+T L D+++ +G+ + W R+ + PF+ W W GG F++ Sbjct: 586 AGIHTTLTRDLFVAMGEPLDGDSWSVRMYYKPFVVWIW-GGTFIM 629
ref|YP_001463547.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E24377A] ref|ZP_03027249.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B7A] ref|ZP_03043316.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E22] ref|ZP_03059761.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B171] ref|YP_002387677.1| heme lyase, CcmF subunit [Escherichia coli IAI1] ref|YP_003222576.1| heme lyase, CcmF subunit [Escherichia coli O103:H2 str. 12009] ref|YP_003230074.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. 11368] ref|YP_003235314.1| heme lyase, CcmF subunit [Escherichia coli O111:H- str. 11128] ref|ZP_07102787.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 119-7] ref|ZP_07687507.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 145-7] ref|ZP_08369749.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TA271] ref|ZP_08378825.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H591] ref|ZP_08391060.1| cytochrome c-type biogenesis protein CcmF [Shigella sp. D9] ref|ZP_11496212.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EPECa14] ref|ZP_11498388.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E128010] ref|ZP_11511452.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli OK1180] ref|ZP_11515490.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli OK1357] ref|ZP_11978965.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 5.0588] ref|ZP_12004010.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3.2608] ref|ZP_12009048.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 93.0624] ref|ZP_12014099.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 4.0522] ref|ZP_12022597.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli JB1-95] ref|ZP_12026247.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.154] ref|ZP_12045840.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 4.0967] ref|ZP_12056673.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3.3884] ref|ZP_12085667.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 900105 (10e)] ref|ZP_12243170.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 2534-86] ref|ZP_12253379.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_94C] ref|ZP_12274392.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_H.1.8] ref|ZP_13741067.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8A] ref|ZP_13753449.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8C] ref|ZP_13759248.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8D] ref|ZP_13765111.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8E] ref|ZP_13770243.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC9A] ref|ZP_13775826.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC9B] ref|ZP_13781191.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC9C] ref|ZP_13786557.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC9D] ref|ZP_13792327.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC9E] ref|ZP_13798095.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10A] ref|ZP_13804202.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10B] ref|ZP_13810080.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10C] ref|ZP_13815607.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10D] ref|ZP_13820944.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10E] ref|ZP_13826976.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10F] ref|ZP_13832235.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC11A] ref|ZP_13837516.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC11B] ref|ZP_13842929.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC11C] ref|ZP_13848960.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC11D] ref|ZP_13853931.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC11E] ref|ZP_13876714.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12D] ref|ZP_13917154.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC14B] ref|ZP_13922414.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC14C] ref|ZP_13927648.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC14D] ref|ZP_13933103.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC15A] ref|ZP_13938101.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC15B] ref|ZP_13943397.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC15C] ref|ZP_13948481.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC15D] ref|ZP_13954031.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC15E] ref|ZP_14392661.1| heme lyase, CcmF subunit [Escherichia coli O103:H2 str. CVM9450] ref|ZP_14398681.1| heme lyase, CcmF subunit [Escherichia coli O111:H11 str. CVM9534] ref|ZP_14404372.1| heme lyase, CcmF subunit [Escherichia coli O111:H11 str. CVM9545] ref|ZP_14407577.1| heme lyase, CcmF subunit [Escherichia coli O111:H8 str. CVM9570] ref|ZP_14415586.1| heme lyase, CcmF subunit [Escherichia coli O111:H8 str. CVM9574] ref|ZP_14419389.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. CVM9942] ref|ZP_14427755.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. CVM10026] ref|ZP_14448493.1| heme lyase, CcmF subunit [Escherichia coli 541-1] ref|ZP_14466715.1| heme lyase, CcmF subunit [Escherichia coli CUMT8] ref|ZP_14601652.1| heme lyase, CcmF subunit [Escherichia coli O111:H8 str. CVM9602] ref|ZP_14607211.1| heme lyase, CcmF subunit [Escherichia coli O111:H8 str. CVM9634] ref|ZP_14613273.1| heme lyase, CcmF subunit [Escherichia coli O111:H11 str. CVM9455] ref|ZP_14620034.1| heme lyase, CcmF subunit [Escherichia coli O111:H11 str. CVM9553] ref|ZP_14627351.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. CVM10021] ref|ZP_14631392.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. CVM10030] ref|ZP_14637006.1| heme lyase subunit CcmF [Escherichia coli O26:H11 str. CVM10224] ref|ZP_14642463.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. CVM9952] ref|ZP_14891180.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EPEC C342-62] ref|ZP_16831141.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H120] ref|ZP_17680624.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B799] ref|ZP_18182140.1| heme lyase subunit CcmF [Escherichia coli O26:H11 str. CFSAN001629] ref|ZP_18185182.1| heme lyase subunit CcmF [Escherichia coli O111:H11 str. CFSAN001630] ref|ZP_18199747.1| heme lyase subunit CcmF [Escherichia coli O111:H8 str. CFSAN001632] ref|ZP_18764289.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1865] ref|ZP_18804183.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 0.1288] ref|ZP_19620358.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE12] ref|ZP_19723524.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE210] ref|ZP_19985284.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE29] ref|ZP_20043742.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE101] ref|ZP_20068723.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE136] ref|ZP_20157219.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE203] gb|ABV20413.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E24377A] gb|EDV64277.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B7A] gb|EDV84486.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E22] gb|EDX31102.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B171] emb|CAQ99123.1| heme lyase, CcmF subunit [Escherichia coli IAI1] dbj|BAI26334.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. 11368] dbj|BAI31442.1| heme lyase, CcmF subunit [Escherichia coli O103:H2 str. 12009] dbj|BAI36763.1| heme lyase, CcmF subunit [Escherichia coli O111:H- str. 11128] gb|EFK45918.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 119-7] gb|EFO60627.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 145-7] gb|EFZ38544.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EPECa14] gb|EFZ47629.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E128010] gb|EFZ62478.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli OK1180] gb|EFZ69557.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli OK1357] gb|EGB41077.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H120] gb|EGI36006.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TA271] gb|EGI45930.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H591] gb|EGJ04345.1| cytochrome c-type biogenesis protein CcmF [Shigella sp. D9] gb|EGW71237.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 2534-86] gb|EGW82750.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_94C] gb|EGX08986.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_H.1.8] gb|EHW09583.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8A] gb|EHW16118.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8C] gb|EHW24907.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8D] gb|EHW27655.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8E] gb|EHW36927.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC9A] gb|EHW39570.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC9B] gb|EHW46282.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC9C] gb|EHW52831.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC9D] gb|EHW57116.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC9E] gb|EHW62258.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10A] gb|EHW68457.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10B] gb|EHW73137.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10C] gb|EHW78285.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10D] gb|EHW89507.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10E] gb|EHW91314.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC11A] gb|EHW93407.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC10F] gb|EHX03759.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC11B] gb|EHX10180.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC11D] gb|EHX11661.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC11C] gb|EHX18728.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC11E] gb|EHX42913.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12D] gb|EHX79122.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC14B] gb|EHX87998.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC14C] gb|EHX91408.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC14D] gb|EHX97514.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC15A] gb|EHY03400.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC15B] gb|EHY07126.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC15C] gb|EHY14035.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC15D] gb|EHY18627.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC15E] gb|EIG49080.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B799] gb|EIH03323.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 5.0588] gb|EIH54385.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3.2608] gb|EIH67083.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 93.0624] gb|EIH79627.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 4.0522] gb|EIH88508.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli JB1-95] gb|EII01600.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.154] gb|EII32503.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 4.0967] gb|EII55474.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3.3884] gb|EIJ13590.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 900105 (10e)] gb|EIL05754.1| heme lyase, CcmF subunit [Escherichia coli O103:H2 str. CVM9450] gb|EIL07859.1| heme lyase, CcmF subunit [Escherichia coli O111:H11 str. CVM9534] gb|EIL23344.1| heme lyase, CcmF subunit [Escherichia coli O111:H11 str. CVM9545] gb|EIL24369.1| heme lyase, CcmF subunit [Escherichia coli O111:H8 str. CVM9574] gb|EIL28072.1| heme lyase, CcmF subunit [Escherichia coli O111:H8 str. CVM9570] gb|EIL37088.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. CVM10026] gb|EIL41761.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. CVM9942] gb|EIL59957.1| heme lyase, CcmF subunit [Escherichia coli 541-1] gb|EIL76702.1| heme lyase, CcmF subunit [Escherichia coli CUMT8] gb|EIQ70216.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EPEC C342-62] gb|EJE63096.1| heme lyase subunit CcmF [Escherichia coli O26:H11 str. CVM10224] gb|EJE64552.1| heme lyase, CcmF subunit [Escherichia coli O111:H8 str. CVM9602] gb|EJE68668.1| heme lyase, CcmF subunit [Escherichia coli O111:H8 str. CVM9634] gb|EJE77261.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. CVM10021] gb|EJE80441.1| heme lyase, CcmF subunit [Escherichia coli O111:H11 str. CVM9553] gb|EJE86509.1| heme lyase, CcmF subunit [Escherichia coli O111:H11 str. CVM9455] gb|EJE95067.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. CVM9952] gb|EJE95412.1| heme lyase, CcmF subunit [Escherichia coli O26:H11 str. CVM10030] gb|EKJ14842.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1865] gb|EKJ57964.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 0.1288] gb|EKT91497.1| heme lyase subunit CcmF [Escherichia coli O26:H11 str. CFSAN001629] gb|EKT95791.1| heme lyase subunit CcmF [Escherichia coli O111:H8 str. CFSAN001632] gb|EKU06166.1| heme lyase subunit CcmF [Escherichia coli O111:H11 str. CFSAN001630] gb|ELC20799.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE12] gb|ELD21908.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE210] gb|ELF86373.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE29] gb|ELG49195.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE101] gb|ELG69531.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE136] gb|ELH51314.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE203] (647 aa) Score: 186 bits (471), Expect: 4.62766e-44 Length: 588, Idn/Pos/Gap = 154/264/77 (26%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLN---LIGWFIASFSILLGSR 234 + HPPL+Y+ Y +S+ F+ F I + C RF L W + I+LGS Sbjct: 171 IFHPPLLYMGYVGFSVAFA--FAIASLLCGRLDSTYARFTRPWTLAAWIFLTLGIVLGSA 228 Query: 235 WAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVII 294 WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + + Sbjct: 229 WAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCL 288 Query: 295 IGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNH 352 +G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 289 LGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSR 348 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFI 403 + + +L++ L +L P + K ++ FFN + LLL + Sbjct: 349 ESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGV 408 Query: 404 GILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALY 444 G L+ L+II I++ L + + + ++G LA+ Sbjct: 409 GPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMA 459 Query: 445 FFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 CWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_07787724.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 1827-70] gb|EFP99382.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 1827-70] (647 aa) Score: 186 bits (471), Expect: 4.66643e-44 Length: 588, Idn/Pos/Gap = 156/267/77 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLL-LFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + L I + I ++ L L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTIFSYWGMVAAHLG-LAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_13747262.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8B] ref|ZP_13859281.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12A] ref|ZP_13871220.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12C] gb|EHW11152.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC8B] gb|EHX29961.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12A] gb|EHX30818.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC12C] (646 aa) Score: 185 bits (470), Expect: 4.78471e-44 Length: 588, Idn/Pos/Gap = 154/264/77 (26%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 61 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 120 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 121 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 169 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLN---LIGWFIASFSILLGSR 234 + HPPL+Y+ Y +S+ F+ F I + C RF L W + I+LGS Sbjct: 170 IFHPPLLYMGYVGFSVAFA--FAIASLLCGRLDSTYARFTRPWTLAAWIFLTLGIVLGSA 227 Query: 235 WAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVII 294 WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + + Sbjct: 228 WAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCL 287 Query: 295 IGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNH 352 +G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 288 LGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSR 347 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFI 403 + + +L++ L +L P + K ++ FFN + LLL + Sbjct: 348 ESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGV 407 Query: 404 GILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALY 444 G L+ L+II I++ L + + + ++G LA+ Sbjct: 408 GPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMA 458 Query: 445 FFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 459 CWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGD 518 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 519 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 572 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 573 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 619
ref|YP_004069287.1| cytochrome C biogenesis protein CcmF [Pseudoalteromonas sp. SM9913] gb|ADT69136.1| cytochrome c-type biogenesis protein ccmF [Pseudoalteromonas sp. SM9913] (653 aa) Score: 185 bits (470), Expect: 4.90599e-44 Length: 582, Idn/Pos/Gap = 157/266/58 (26%/45%/9%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L DF++ +V SS P YK+ + W +EG++ L + L + + L + Sbjct: 62 LTDDFTVSYVAYHSSSTLPWYYKITSTWGGHEGAILL-WLLMQAGWTAVVAVRSKSLPWV 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 ++ + F+ + F+ TLLL F+ + +EG +LN LLQD ++IHPPL+ Sbjct: 121 LRARVLGVLGFL--GVGFMMYTLLLSS-PFERLLPYFPVEGRDLNPLLQDPGMIIHPPLL 177 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y+ Y S+ F+ + L+ K R + W + I +GS WAY+ELGWG Sbjct: 178 YMGYVGLSVAFAFAIAALLTGKLDNTWAKWSRPWTMTAWGFLTLGITIGSWWAYSELGWG 237 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE SL+PWL++ ALLHSL + K + + ++ L +A + + ++G +VRSG Sbjct: 238 GWWFWDPVENASLMPWLVATALLHSLSVTEKRGVFKSWTVLLAIAAFSLSLLGTFIVRSG 297 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL- 362 ++ SVH F P+ + F L F+ +++ L Y S Y FV L Sbjct: 298 IIVSVHAFATDPDRGL----FILGFLAVVVGGGLALYGLRVSQVKSEGRYKFVSREVALW 353 Query: 363 -----VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILL-------------- 400 +++ L +L P + K ++ FFNK ILL Sbjct: 354 LNNIFLVVATLIVLLGTLLPMVHKEMGLGSISIGEPFFNKMFAILLVPFAILMGIGPFLR 413 Query: 401 ------------LFIGILLTLII--IFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFF 446 +F+G L+++II +L +S++++ + G+ F F+ LY Sbjct: 414 WKQNKWAFLQNKIFVGALVSIIITCAWLFSSYEVVTPLTLLATTLGVWIFVATFIDLYTK 473 Query: 447 IYLLLFTLILIIKQ----KFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + +L L IK+ ++ ++ H F++ + L + Y E ++ G ++ LN Sbjct: 474 A-AVHGSLKLGIKRLGLSYWAMVLGHVGLAFVIAGITLTSAYSVERDVSMKPGDSVQLN- 531 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + F + I NY G + ++ + L++EKR Y T++ Sbjct: 532 QYQYRFEGVKTIRGANYSGHAGVVTVLKGNDTVTR------LYAEKRRYDIGMQFMTEAA 585 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 I D+Y+ LG+ E W RI PF+ W W+GGI + Sbjct: 586 IDAGFTRDLYLALGEQLSEGAWSLRIYHKPFVRWMWIGGILI 627
ref|YP_001458995.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli HS] gb|ABV06612.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli HS] (647 aa) Score: 185 bits (470), Expect: 4.98855e-44 Length: 587, Idn/Pos/Gap = 153/264/75 (26%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN I LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTIFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_12489199.1| Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M21127] gb|EGT76945.1| Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M21127] (648 aa) Score: 185 bits (470), Expect: 5.24464e-44 Length: 589, Idn/Pos/Gap = 155/268/74 (26%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ +VV S+ P Y+L +W ++EGSL L + + + + + L+ Sbjct: 63 VNDFSVQYVVNNSNTALPIYYRLSAVWGSHEGSLLL--------WIWLLAVWSSAVALLS 114 Query: 126 KLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFT--VLEGNELNFLLQDINILIHP 181 K V +L + +S+ +L +F F F ++G ELN +LQD+ ++ HP Sbjct: 115 KHLPQEAVARVLGIMGIISVGFVLFVLFTSNPFTRTFPDFPVDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 LL+ L + F P + K ++ FF+++ L+ + L+ I Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 415 INSWKL---------IFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILII------- 458 + W+ + I + +++I G P FL + +L +++ +I Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMVIAGF-ALP-YFLQDKITVSSVLGSMMTVIIALLALY 468 Query: 459 --KQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILNFSIGKTLLLN- 501 +Q+ + H FF+ + L +T++G F NFS+ + + + Sbjct: 469 ELQQRAT----HRESFFVGVRKLSRSHWGMMLAHLGVAMTVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFAGVTDVNGPNYIGGKAQIDISKDGQP------ETSLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|YP_004139141.1| cytochrome C biogenesis protein CcmF [Haemophilus influenzae F3047] ref|ZP_08252717.1| cytochrome c biogenesis protein CcmF [Haemophilus aegyptius ATCC 11116] emb|CBY87478.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae F3047] gb|EGF13093.1| cytochrome c biogenesis protein CcmF [Haemophilus aegyptius ATCC 11116] (648 aa) Score: 185 bits (470), Expect: 5.28858e-44 Length: 589, Idn/Pos/Gap = 164/267/74 (27%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LL-----------TLIII----FLINSWKLIFIFLGIIIIGGIRG-FPEIFLALYFFIYL 449 L+ T ++I LI + L + I + + G + +AL L Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMLIAGFALPYFLQDKITVSSVLGSMMTVIIAL-----L 465 Query: 450 LLFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL-- 500 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 466 ALYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKV 524 Query: 501 NDNFIIIFRDLNHIWST-----NYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 +N I D + T NY+ I+ P + LF+EKRFY Sbjct: 525 GENAQIGRYDFKFVGVTDENGPNYVGGKAQIDISKDGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_11996792.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 99.0741] gb|EIH47207.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 99.0741] (647 aa) Score: 185 bits (470), Expect: 5.37758e-44 Length: 588, Idn/Pos/Gap = 154/266/77 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKC-KFYVLYI--LRFLNLIGWFIASFSILLGSR 234 + HPPL+Y+ Y +S+ F+ F I + C + +Y R L W + I+LGS Sbjct: 171 IFHPPLLYMGYVGFSVAFA--FAIASLLCGRLDSIYARFTRPWTLAAWIFLTLGIVLGSA 228 Query: 235 WAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVII 294 WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + + Sbjct: 229 WAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCL 288 Query: 295 IGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNH 352 +G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 289 LGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSR 348 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFI 403 + + +L++ L +L P + K ++ FFN + LLL + Sbjct: 349 ESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGV 408 Query: 404 GILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALY 444 G L+ L+II I++ L + + + ++G LA+ Sbjct: 409 GPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMA 459 Query: 445 FFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 CWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGITFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_18287280.1| cytochrome c-type biogenesis protein CcmF [SAR86 cluster bacterium SAR86A] gb|EJP72199.1| cytochrome c-type biogenesis protein CcmF [SAR86 cluster bacterium SAR86A] (630 aa) Score: 185 bits (470), Expect: 5.56008e-44 Length: 583, Idn/Pos/Gap = 160/285/55 (27%/48%/9%) Query: 55 IIIWLIGIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFI 114 I +WL + +FS+ ++ S+ + P+ YK+ ++WS +EGS+FL ++ F+ + F+ Sbjct: 54 IYVWL----AITDNFSVAYIASHSNSDLPTFYKISSIWSAHEGSMFL--WILFLAAWGFL 107 Query: 115 -NYFINKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQ 173 N I+ ++ L+ + I+ + FLS LLL F+ F G ++N +LQ Sbjct: 108 FNRSIDNEVVLKPLSI--GIISIVL-VGFLSF-LLLTSNPFETILPFGPPNGADINPVLQ 163 Query: 174 DINILIHPPLIYISYASYSIIFSISFTILI---IKCKFYVLYILRFLNLIGWFIASFSIL 230 D + IHPP +Y+ Y + I F+ + LI + K+ L +R ++ W + I Sbjct: 164 DPALAIHPPTLYLGYVGFVIPFACALAFLINGNTEIKWEEL--VRKWSVSAWIFLTLGIT 221 Query: 231 LGSRWAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIY 290 LGS WAY ELGWGG+WFWD VE ++L+PWL + A LHS+ +++K +R+ ++ L ++++ Sbjct: 222 LGSWWAYYELGWGGYWFWDPVENVALMPWLAATAFLHSISVSVKSSNLRIWTILLSISVF 281 Query: 291 FVIIIGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLN 350 + + G +VRSG++ SVH+F N P + L F IFI +V+ + + S + Sbjct: 282 SLSLFGAFIVRSGIIDSVHSFANDPQRGLYLLAFIGTIIFISMVLFVIRLPVIRSAGSIK 341 Query: 351 --NHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLT 408 + +F+ +L ++ + +P + + D + F+N I + + ++ + Sbjct: 342 AFSKESFISINNILFGSLVFSIMLGVTYPLVYEFLFDQKISVGAPFYNAIFIPIV-VIAS 400 Query: 409 LIIIFLINS-WKLIFI---FLGIIIIGGIRGFPEIFLALYFF------IYLLLFTLILII 458 + + F I+S W+ F G I + L +YFF I LF LII Sbjct: 401 IFLFFSIDSKWQRTVKMKFFAGPTSFSVILAVISVVLCIYFFNTESFTIIASLFAGFLII 460 Query: 459 KQ----------------KFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + FS ++ HF+ +++S+ ++ E +N I ++ D Sbjct: 461 HRYIIEIASSIFSKKYINPFS-VLAHFSLGLLIVSIAFNSMLSTERAINIKINESESYMD 519 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITD-FHNPMCYENIQNVLFSEKRFYLYQSLINTKS 561 I F+D++ + +N+ + NFLI D F N L EKR Y + I T++ Sbjct: 520 -LNIFFKDISLVNKSNHDAIKANFLIEDSFSNSFS-------LSPEKRKYFTRGQITTET 571 Query: 562 IIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 IY + D+Y+ +GD + W I I W W+ +F+ Sbjct: 572 AIYVTPLRDIYLTIGDQLEDGSWIVNIQINYLIRWIWISAVFM 614
ref|ZP_06658138.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B185] gb|EFF06122.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B185] (647 aa) Score: 185 bits (470), Expect: 5.56008e-44 Length: 588, Idn/Pos/Gap = 155/267/77 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLL-LFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + +L I + ++ L L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAVLRISRGTKTTFSYWGMVAAHLG-LAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_002971518.1| cytochrome c-type biogenesis protein CycK [Bartonella grahamii as4aup] gb|ACS50836.1| cytochrome c-type biogenesis protein CycK [Bartonella grahamii as4aup] (659 aa) Score: 185 bits (470), Expect: 5.65365e-44 Length: 605, Idn/Pos/Gap = 174/287/87 (28%/47%/14%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL--- 121 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L + L + + +F L Sbjct: 62 VVSDFSVLNVVENSHSEKPMLYKITGVWGNHEGSMLL-WVLSLAFFSALMAFFSQHLPED 120 Query: 122 --TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 TL++ + F+LF I F+S FLR N L+GN LN LLQDI + I Sbjct: 121 FKTLVLICQSWITSAFLLF-ILFVSNP----FLRV----NPPALQGNGLNPLLQDIALAI 171 Query: 180 HPPLIYISYASYSIIFSISFTILIIK--CKFYVLYILRFLNLIGWFIASFSILLGSRWAY 237 HPPL+Y+ Y +S+ FS + LI+ + + I +L L+ W + I++GS WAY Sbjct: 172 HPPLLYLGYVGFSLCFSFAVAALIMGHVDRIWARGIRPWL-LLSWCFLTLGIMVGSYWAY 230 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE +S +PWL ALLHS L+ K I++ +LFL + + + ++G Sbjct: 231 YELGWGGYWFWDPVENVSFMPWLSGTALLHSALVLEKREILKSWTLFLALLTFSLSLMGT 290 Query: 298 ILVRSGLLQSVHTFVNSP---NFLIIFLYFFLVFIFILIVI---LLKKYTYFTSIFDLNN 351 LVRSGLL SVH+F P ++ L+FF F+L + +LK +F I + Sbjct: 291 FLVRSGLLVSVHSFAVDPARGQAILALLFFFTGAAFLLFALRTPILKTERFFQPI----S 346 Query: 352 HYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 F+ LL+ +L +P+ I+ + FFN L G L+ ++ Sbjct: 347 REGFIVLNNLLLTTITATVLIGTLYPYFIEILTGQKISVGAAFFN----LTCGPLMVFLL 402 Query: 412 IFL----INSWK------------LIFIFLGIII-----IGGIRG-FPEIFLALYFFIYL 449 +F+ + +WK L+F+ +GI+ +R F + + L F++L Sbjct: 403 LFVPFGTMMAWKRGDLLAVFERLWLVFVLVGIVCFIIFYETSLRDIFAVLGIGLSAFVFL 462 Query: 450 LLFTLI------------LIIKQ-------KFSFIVYHFNFFFIMLSLLLITIYGEEFIL 490 + + +K+ F + H +L ++ + +G+E IL Sbjct: 463 GSLADLWGKSGYGKRAFSVRVKRFLGLPWSTFGAAIAHMGLGVTLLGIVCVASFGQERIL 522 Query: 491 NFSIGKTLLLND---NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSE 547 ++G + + D +F ++ + +NY + F + N +NI + + Sbjct: 523 IMNVGDRVTIADKTLHFDAVYEGVG----SNYSAM--EFYFKIYEN----KNIVGHVTAS 572 Query: 548 KRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDS 607 KRFY Q+ T+ + + +S +YI+ G + G I + P++ WLG + Sbjct: 573 KRFYSSQNTSTTEVGLQNHGLSQLYIVPGHTD-NRGLVVHIWWKPYVICIWLGAFMMAVG 631 Query: 608 IIFSL 612 SL Sbjct: 632 GCLSL 636
ref|YP_311136.1| cytochrome c-type biogenesis protein [Shigella sonnei Ss046] ref|ZP_14864949.1| cytochrome c-type biogenesis protein CcmF [Shigella sonnei 4822-66] gb|AAZ88901.1| cytochrome c-type biogenesis protein [Shigella sonnei Ss046] gb|EIQ51988.1| cytochrome c-type biogenesis protein CcmF [Shigella sonnei 4822-66] (647 aa) Score: 185 bits (470), Expect: 5.70102e-44 Length: 587, Idn/Pos/Gap = 153/264/75 (26%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASYSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 I FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 IDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_12886070.1| cytochrome c-type biogenesis protein CcmF [Shigella sonnei str. Moseley] gb|EJL15788.1| cytochrome c-type biogenesis protein CcmF [Shigella sonnei str. Moseley] (672 aa) Score: 185 bits (470), Expect: 5.84552e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASYSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_16833674.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW10509] gb|EGB72693.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW10509] (647 aa) Score: 185 bits (470), Expect: 5.84552e-44 Length: 590, Idn/Pos/Gap = 156/268/81 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSL---LLITIYGEEFILNFSIGKTLLLND 502 +I +L I Q+ S ++ M++ L +TI G F N+S+ + + + Sbjct: 461 WIAVL---AIAEAAQRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKS 517 Query: 503 NFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + FRD+ + N+ +T P + VL++EKR+Y Sbjct: 518 GDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAG 571 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 + T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 572 SMMTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_006169302.1| Cytochrome c-type biogenesis protein ccmF [Escherichia coli P12b] gb|AFG41132.1| Cytochrome c-type biogenesis protein ccmF [Escherichia coli P12b] (647 aa) Score: 185 bits (470), Expect: 5.94389e-44 Length: 588, Idn/Pos/Gap = 155/267/77 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLL-LFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + +L I + ++ L L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAVLRISRGTKTTFSYWGMVAAHLG-LAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_13660547.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5A] gb|EHV23960.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5A] (647 aa) Score: 185 bits (470), Expect: 6.04391e-44 Length: 595, Idn/Pos/Gap = 156/266/91 (26%/44%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILI-----IKQKFSF---IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 +I +L + K FS+ + H L +TI G F N+S+ + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLG--------LAVTIVGIAFSQNYSVERD 512 Query: 498 LLLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRF 550 + + + FRD+ + N+ +T P + VL++EKR+ Sbjct: 513 VRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRY 566 Query: 551 YLYQSLINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 Y + T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 567 YNTAGSMMTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_19742439.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE216] ref|ZP_19930256.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE162] ref|ZP_20123774.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE173] ref|ZP_20128991.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE175] ref|ZP_20170399.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE211] ref|ZP_20283250.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE139] ref|ZP_20292463.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE148] gb|ELD41303.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE216] gb|ELF29226.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE162] gb|ELH24730.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE173] gb|ELH25109.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE175] gb|ELH70540.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE211] gb|ELI84543.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE139] gb|ELI95606.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE148] (647 aa) Score: 185 bits (469), Expect: 6.14561e-44 Length: 587, Idn/Pos/Gap = 152/265/75 (25%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLLSR-RLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_18659667.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 5412] gb|EKI09558.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 5412] (646 aa) Score: 185 bits (469), Expect: 6.24903e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 61 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 120 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 121 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 169 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 170 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 228 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 229 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 288 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 289 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 348 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 349 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 408 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 409 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 459 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVCMKSGDS 519 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 573 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 619
ref|YP_006134473.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli UMNK88] gb|AEE57310.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli UMNK88] (647 aa) Score: 185 bits (469), Expect: 6.30139e-44 Length: 588, Idn/Pos/Gap = 155/267/77 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDSPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLL-LFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + +L I + ++ L L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAVLRISRGTKTTFSYWGMVAAHLG-LAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_07246884.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 146-1] gb|EFK89576.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 146-1] (647 aa) Score: 185 bits (469), Expect: 6.30139e-44 Length: 587, Idn/Pos/Gap = 152/265/75 (25%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I ++ D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGDITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_07448853.1| heme lyase, CcmF subunit [Escherichia coli NC101] ref|ZP_20161266.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE207] ref|ZP_20269611.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE133] gb|EFM52537.1| heme lyase, CcmF subunit [Escherichia coli NC101] gb|ELH61608.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE207] gb|ELI71555.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE133] (647 aa) Score: 185 bits (469), Expect: 6.35418e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMASVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_004501995.1| cytochrome c-type biogenesis protein CcmF [Serratia sp. AS12] ref|YP_004506947.1| cytochrome c-type biogenesis protein CcmF [Serratia plymuthica AS9] ref|YP_006026409.1| cytochrome c-type biogenesis protein CcmF [Serratia sp. AS13] gb|AEF46686.1| cytochrome c-type biogenesis protein CcmF [Serratia plymuthica AS9] gb|AEF51638.1| cytochrome c-type biogenesis protein CcmF [Serratia sp. AS12] gb|AEG29345.1| cytochrome c-type biogenesis protein CcmF [Serratia sp. AS13] (656 aa) Score: 185 bits (469), Expect: 6.40742e-44 Length: 591, Idn/Pos/Gap = 152/263/76 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DF++ +V S+ P Y++ W +EGSL L + ++ + + L Sbjct: 62 VVNDFTVAYVAANSNSQLPVYYRIAATWGAHEGSLLL--------WVLLLSCWSLAVALC 113 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTV----LEGNELNFLLQDINILIH 180 + V +L + ++ LL + F T+ ++G++LN LLQDI ++ H Sbjct: 114 SRSMPQDAVARVLSVMGMITAGFLLFIIMTSNPFTRTLPNFPIDGSDLNPLLQDIGLIFH 173 Query: 181 PPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PPL+Y+ Y +S+ F+ + L+ + R W + I+LGS WAY E Sbjct: 174 PPLLYMGYVGFSVAFAFAIASLMAGRLDTAWARWSRPWTTAAWVFLTLGIVLGSAWAYYE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G L Sbjct: 234 LGWGGWWFWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAITAFSLCLLGTFL 293 Query: 300 VRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 VRSG+L SVH+F + P + I Y +V L++ +K + + H F Sbjct: 294 VRSGVLVSVHSFASDPARGMFILAYLVIVIGGSLLLYAVKGGQVRSRV----QHETFSRE 349 Query: 359 IFL-----LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 FL L+I L +L P + K ++ FFN + LL+ IG Sbjct: 350 TFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMAPMALLMGIG 409 Query: 405 ILLTLIIIFLINSWKLIFIFLGIIII----------GGIRGFPEIFLALYFFIYLLLFTL 454 L+ W+ + + L I ++ I G + L +++++ TL Sbjct: 410 PLVRWRRDEPTKLWRRLSVALAITLVLSILLPWLLQDSIAGM--TVVGLIMAVWVIILTL 467 Query: 455 ILIIKQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILNFSIGKTLLL 500 + + ++ H + F+ LS L +T+ G F N+S+ + + + Sbjct: 468 MELHER-----ATHRHGFWRGLSHLSRSHWGMVLGHLGVAVTVIGIAFSQNYSVERDVRM 522 Query: 501 --NDNFII-----IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 D+ I +FRD++ I NY G +T P + L +EKR+Y Sbjct: 523 KAGDSVDIHSYHFVFRDVHDIRGPNYSGGVGIIDVTRNGKP------EATLHAEKRYYSV 576 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I D+Y LG+ + W R+ + PF+ W W GG+F+ Sbjct: 577 ARSMMTEAAIDGGFSRDLYAALGEELDDGSWAVRLYYKPFVRWIWFGGVFM 627
ref|ZP_09235002.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20439] dbj|GAA71251.1| cytochrome c-type biogenesis protein CcmF [Pseudoalteromonas sp. BSi20439] (653 aa) Score: 185 bits (469), Expect: 6.46111e-44 Length: 582, Idn/Pos/Gap = 156/266/58 (26%/45%/9%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 L DF++ +V SS P YK+ + W +EG++ L + L + + L + Sbjct: 62 LTDDFTVSYVAYHSSSTLPWYYKITSTWGGHEGAILL-WLLMQAGWTAVVAVRSKSLPWV 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 ++ + F+ + F+ TLLL F+ + +EG +LN LLQD ++IHPPL+ Sbjct: 121 LRARVLGVLGFL--GVGFMMYTLLLSS-PFERLLPYFPVEGRDLNPLLQDPGMIIHPPLL 177 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y+ Y S+ F+ + L+ K R + W + I +GS WAY+ELGWG Sbjct: 178 YMGYVGLSVAFAFAIAALLTGKLDNTWAKWSRPWTMTAWGFLTLGITIGSWWAYSELGWG 237 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE SL+PWL++ ALLHSL + K + + ++ L +A + + ++G +VRSG Sbjct: 238 GWWFWDPVENASLMPWLVATALLHSLSVTEKRGVFKSWTVLLAIAAFSLSLLGTFIVRSG 297 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLL- 362 ++ SVH F P+ + F L F+ +++ L Y S Y FV L Sbjct: 298 IIVSVHAFATDPDRGL----FILGFLAVVVGGGLALYGLRVSQVKSEGRYKFVSREVALW 353 Query: 363 -----VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILL-------------- 400 +++ L +L P + K ++ FFNK ILL Sbjct: 354 LNNIFLVVATLIVLLGTLLPMVHKEMGLGSISIGEPFFNKMFAILLVPFAILMGIGPFLR 413 Query: 401 ------------LFIGILLTLII--IFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFF 446 +F+G L+++II +L +S++++ + G+ F F+ LY Sbjct: 414 WKQNKWAFLQNKIFVGALVSIIITCAWLFSSYEVVTPLTLLATTLGVWIFVATFIDLYTK 473 Query: 447 IYLLLFTLILIIKQ----KFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLND 502 + +L L IK+ ++ ++ H F++ + L + Y E ++ G ++ LN Sbjct: 474 A-AVHGSLKLGIKRLGLSYWAMVLGHVGLAFVIAGITLTSAYSVERDVSMKPGDSVQLN- 531 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 + F + I NY G + ++ + L++EKR Y T++ Sbjct: 532 QYQYRFEGVKTIRGANYSGHAGVVTVLKGNDTVTR------LYAEKRRYDIGMQFMTEAA 585 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 I D+Y+ LG+ E W RI PF+ W W+GG+ + Sbjct: 586 IDAGFTRDLYLALGEQLSEGAWSLRIYHKPFVRWMWIGGVLI 627
ref|YP_005179277.1| heme lyase, CcmF subunit [Haemophilus influenzae 10810] emb|CBW29439.1| heme lyase, CcmF subunit [Haemophilus influenzae 10810] (648 aa) Score: 185 bits (469), Expect: 6.51524e-44 Length: 589, Idn/Pos/Gap = 159/262/74 (26%/44%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LLT---------------LIIIFLINSWKLIFIFLGIIIIGGIRG-FPEIFLALYFFIYL 449 L+ + + LI + L + I + + G + +AL L Sbjct: 411 LVKWRRDQFSAIRTPVVICVFVMLIAGFALPYFLQDKITVSSVLGSMMTVIIAL-----L 465 Query: 450 LLFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN- 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 466 ALYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFTGVTDENGPNYIGGKAQIDISKDGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_11879230.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H- str. 493-89] ref|ZP_11884147.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H- str. H 2687] ref|ZP_13621804.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3F] ref|ZP_14783592.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW06591] gb|ACI81221.1| cytochrome c-type biogenesis protein [Escherichia coli] gb|EFX15453.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H- str. 493-89] gb|EFX20283.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H- str. H 2687] gb|EHU85326.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3F] gb|EIO49318.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW06591] (647 aa) Score: 185 bits (469), Expect: 6.51524e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVCMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_005177168.1| cytochrome c-type biogenesis protein CcmF [Pasteurella multocida 36950] gb|AET16199.1| cytochrome c-type biogenesis protein CcmF [Pasteurella multocida 36950] (651 aa) Score: 185 bits (469), Expect: 6.56983e-44 Length: 585, Idn/Pos/Gap = 155/267/66 (26%/45%/11%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ ++V S+ N P Y+L +W ++EGSL L + ++ + F +L Sbjct: 63 VNDFSVQYIVNNSNTNLPLHYRLSAVWGSHEGSLLL-WIWLLTLWGAAVAMFSKQLPQEA 121 Query: 126 KLTFFYNVYFILFNISFLSLTLLLIFL----RFDFFFNFTVLEGNELNFLLQDINILIHP 181 V +L + +S+ L+ L FD F ++G ELN LLQD+ ++ HP Sbjct: 122 -------VSRVLGIMGIISIGFLIFVLFTSNPFDRTFPDFPVDGKELNPLLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R + W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE SL+PW+ ALLHSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENASLMPWIAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF 360 RSG+L SVH F + P + L + +V I V+ K + S + Y+ + Sbjct: 295 RSGILVSVHAFASDPTRGLYILAYLVVVIGGSFVLYAYKGSQIRS-RENAERYSRETALL 353 Query: 361 LLVILYFLYLLFVL---YFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGILLT 408 L IL L VL P + K + FF+++ LLL +G L+ Sbjct: 354 LNNILLMSALSVVLLGTLLPLVHKQLGLGTISVGAPFFDQMFLIIMVPFSLLLGVGPLIK 413 Query: 409 ---------------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFT 453 +I+ L+ + L ++ + + + G +A+ F + L ++ Sbjct: 414 WRRDEFSAIRKPVILSLIVMLVAGFALPYLLQDQLTVSAVLG---TMMAV-FIVLLSVYE 469 Query: 454 LILIIKQKFSF-------IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN----- 501 L + +F H+ L + + +++G F N+S+ + + +N Sbjct: 470 LQQRATHRSAFWSGLTKLSRSHWGMVLAHLGVAM-SVWGIAFSQNYSMERDVRMNVGDSV 528 Query: 502 --DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 ++ F+ + NYL G + N ++ +LF+EKRFY + T Sbjct: 529 QIADYQFTFQGITEANGPNYLG--GKAQVDIRRN----GQVEAILFAEKRFYTVSKMTMT 582 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 ++ I D+Y+ LG+ ++ W R+ + PFI W W GG+F+ Sbjct: 583 EAAIDWGFTRDIYVALGENLGQDAWALRLYYKPFIRWIWFGGVFM 627
ref|NP_439251.1| cytochrome C-type biogenesis protein [Haemophilus influenzae Rd KW20] ref|ZP_05848009.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae RdAW] sp|P45037.1|CCMF_HAEIN RecName: Full=Cytochrome c-type biogenesis protein CcmF gb|AAC22751.1| cytochrome C-type biogenesis protein (ccmF) [Haemophilus influenzae Rd KW20] gb|EEW77396.1| cytochrome c-type biogenesis protein CcmF [Haemophilus influenzae RdAW] (648 aa) Score: 185 bits (469), Expect: 6.73636e-44 Length: 589, Idn/Pos/Gap = 159/262/74 (26%/44%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFL----QFIIYFTFINYFINKL 121 ++DFS+ ++V S+ P Y+L +W ++EGSL L +L F + + + Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLLWIWLLAVWSFAVALLSKHLPQEAV 122 Query: 122 TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHP 181 ++ + +V F+LF + F S F F ++G ELN +LQD+ ++ HP Sbjct: 123 ARVLGIMGIISVGFVLF-VLFTSNPFTRTFPDFP-------VDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKI---------LLLFIGI 405 LL+ L + F P + K ++ FF+++ LLL IG Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 406 LLT---------------LIIIFLINSWKLIFIFLGIIIIGGIRG-FPEIFLALYFFIYL 449 L+ + + LI + L + I + + G + +AL L Sbjct: 411 LVKWRRDQFSAIRTPVVICVFVMLIAGFALPYFLQDKITVSSVLGSMMTVIIAL-----L 465 Query: 450 LLFTLILIIKQKFSFIV-------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLN- 501 L+ L + SF V H+ L + + T++G F NFS+ + + + Sbjct: 466 ALYELQQRATHRESFFVGVRKLSRSHWGMMLAHLGVAM-TVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFTGVTDENGPNYIGGKAQIDISKDGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|YP_005457167.1| cytochrome c-type biogenesis protein [Shigella sonnei 53G] ref|ZP_11433986.1| cytochrome c-type biogenesis protein CcmF [Shigella sonnei 3233-85] ref|ZP_11524279.1| cytochrome c-type biogenesis protein CcmF [Shigella sonnei 53G] ref|ZP_14860242.1| cytochrome c-type biogenesis protein CcmF [Shigella sonnei 3226-85] gb|EFZ54329.1| cytochrome c-type biogenesis protein CcmF [Shigella sonnei 53G] gb|EIQ40586.1| cytochrome c-type biogenesis protein CcmF [Shigella sonnei 3226-85] gb|EIQ43152.1| cytochrome c-type biogenesis protein CcmF [Shigella sonnei 3233-85] (647 aa) Score: 185 bits (469), Expect: 6.73636e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASYSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_05933293.1| cytochrome c-type biogenesis protein CcmF [Brucella ceti M13/05/1] ref|ZP_05960685.1| cytochrome c-type biogenesis protein CcmF [Brucella ceti M644/93/1] gb|EEX90669.1| cytochrome c-type biogenesis protein CcmF [Brucella ceti M13/05/1] gb|EEX97674.1| cytochrome c-type biogenesis protein CcmF [Brucella ceti M644/93/1] (663 aa) Score: 185 bits (469), Expect: 6.7928e-44 Length: 594, Idn/Pos/Gap = 165/268/63 (27%/45%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L F+ ++ + F L Sbjct: 62 VVSDFSVLNVVENSHSQKPLLYKITGVWGNHEGSMLLWVFI-LTLFSALVAAFSGNLPET 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTV-LEGNELNFLLQDINILIHPPL 183 ++ +I +FL+ +IF F F +EG +LN +LQDI + IHPPL Sbjct: 121 LRANVLAVQGWI--GTAFLAF---IIFTSNPFTRIFPAPMEGGDLNPVLQDIGLAIHPPL 175 Query: 184 IYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ FS + L+ + + + +R L+ W + I +GS WAY ELG Sbjct: 176 LYLGYVGFSVCFSFAVAALL-EGRLDAAWARWVRPWALMAWMFLTGGIAMGSYWAYYELG 234 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE SL+PWL+ ALLHS ++ K +++ ++ L + + + ++G LVR Sbjct: 235 WGGWWFWDPVENASLMPWLVGTALLHSAIVMEKRSALKIWTVLLAILTFSLSLLGTFLVR 294 Query: 302 SGLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 SG+L SVH+F P F++ L F+ + L + ++ + ++ V+ Sbjct: 295 SGVLTSVHSFATDPGRGLFILGILALFIGGLLSLFALRVQSLSAGGIFHPISREGALVFN 354 Query: 359 IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN------KILLLFI---GILLT- 408 L L+ LY P L++ + FFN + LLF G LL Sbjct: 355 NLFLTTAAATVLIGTLY-PLLLEVTTGEKISVGAPFFNMTFGPLMVPLLFAVPFGPLLAW 413 Query: 409 ------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLA------LYFFIYLLLFTLIL 456 + L+ ++ L +GI++ R LA + I+ L L+L Sbjct: 414 KRGDLYGVGQRLMTAFALSLAVVGIML---WRTSAHSVLAALGIGLAAWLIFASLTDLVL 470 Query: 457 IIK-------------QKFSFIVYHFNFFFIMLSLLLI-----TIYGEEFILNFSIGKTL 498 + V+ + I L L L+ T +G E +L G T Sbjct: 471 KAGIGKVSASKAFARFKGLPRSVFGTSLAHIGLGLTLLGIVSVTTFGTENVLVMQPGGTA 530 Query: 499 LLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + N+ + F L I +N+ G F + D V+ KRF+ + + Sbjct: 531 KVQ-NYTLRFEGLRPITGSNFTENRGAFTLLDSSG-----RDLAVIEPSKRFFPARQMPT 584 Query: 559 TKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSL 612 T+S I T S VY+ LGD RI + P ++ W G + ++ +FSL Sbjct: 585 TESGIKTLWFSQVYVALGDEPGNGAVVVRIWWKPLVTLIWYGALVMMLGGLFSL 638
ref|NP_288776.1| cytochrome C biogenesis protein [Escherichia coli O157:H7 str. EDL933] gb|AAG57331.1|AE005452_4 cytochrome c-type biogenesis protein [Escherichia coli O157:H7 str. EDL933] (647 aa) Score: 185 bits (469), Expect: 6.84971e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_08374477.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TA280] gb|EGI40379.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TA280] (647 aa) Score: 185 bits (469), Expect: 6.84971e-44 Length: 588, Idn/Pos/Gap = 155/267/77 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLL-LFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + +L I + ++ L L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAVLRISRGTKTTFSYWGMVAAHLG-LAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_04632517.1| Cytochrome c-type bioproteinsis protein ccmF [Yersinia frederiksenii ATCC 33641] gb|EEQ14968.1| Cytochrome c-type bioproteinsis protein ccmF [Yersinia frederiksenii ATCC 33641] (654 aa) Score: 185 bits (469), Expect: 7.08218e-44 Length: 620, Idn/Pos/Gap = 158/272/98 (25%/43%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DF++ +V S+ + P +++ W +EGSL L + ++ + + L Sbjct: 61 VVNDFTVSYVAANSNSHLPVYFRIAATWGAHEGSLLL--------WVLLLSCWSLAVALF 112 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTV----LEGNELNFLLQDINILIH 180 + V +L + ++ LL + FN T+ ++GN+LN LLQD+ ++ H Sbjct: 113 SRSMPDDAVARVLSVLGMITGGFLLFIILTSNPFNRTLPDFPIDGNDLNPLLQDVGLIFH 172 Query: 181 PPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PPL+Y+ Y +S+ F+ + L+ + R W + I+LGS WAY E Sbjct: 173 PPLLYMGYVGFSVAFAFAIASLMAGRLDSAWARWSRPWTQAAWVFLTMGIVLGSAWAYYE 232 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G L Sbjct: 233 LGWGGWWFWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLMGTFL 292 Query: 300 VRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 VRSG+L SVH+F + P + I Y +V L++ +K + H F Sbjct: 293 VRSGVLVSVHSFASDPARGMFILAYLVIVIGGSLLLYAVKG----AQVRSRTQHEVFSRE 348 Query: 359 IFL-----LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 FL L+I L +L P + K ++ FFN + LL+ IG Sbjct: 349 TFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMAPMALLMGIG 408 Query: 405 IL----------------LTLIIIFLIN---SWKLIFIFLGIIIIGGIRGFPEIFLALYF 445 L + L++ L++ W L G+ ++G L Sbjct: 409 PLVRWRRDEPSKLWKRLGVALVVTLLLSIWVPWLLQDTIAGMTVVG-----------LMM 457 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILN 491 I++++ TL+ + ++ H + F+ LS L +T+ G F N Sbjct: 458 AIWVIILTLMELHER-----ATHRHGFWRGLSHLSRSHWGMVLGHLGVAVTVIGIAFSQN 512 Query: 492 FSIGKTLLLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVL 544 +S+ + + + I +FRD++ I NY G +T P + L Sbjct: 513 YSVERDVRMKAGDSIDIHDYHFVFRDVHDIKGPNYTGGVGIIDVTRNGKP------EATL 566 Query: 545 FSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 +EKR+Y + T++ I L D+Y LG+ + W R+ + PF+ W W GG+F+ Sbjct: 567 HAEKRYYAVSRSMMTEAAIDGGLTRDLYAALGEELDDGSWAVRLYYKPFVRWIWYGGVFM 626 Query: 605 LDSIIFSL----FRCIKNFQ 620 IF + +R K + Sbjct: 627 AIGGIFCMLDPRYRMSKKLK 646
ref|ZP_14385184.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O103:H25 str. CVM9340] gb|EIL10554.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O103:H25 str. CVM9340] (647 aa) Score: 185 bits (469), Expect: 7.20136e-44 Length: 595, Idn/Pos/Gap = 156/266/91 (26%/44%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILI-----IKQKFSF---IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 +I +L + K FS+ + H L +TI G F N+S+ + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLG--------LAVTIVGIAFSQNYSVERD 512 Query: 498 LLLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRF 550 + + + FRD+ + N+ +T P + VL++EKR+ Sbjct: 513 VRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRY 566 Query: 551 YLYQSLINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 Y + T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 567 YNTAGSMMTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_07186365.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 69-1] ref|ZP_14438758.1| heme lyase, CcmF subunit [Escherichia coli KD2] ref|ZP_19954286.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE9] gb|EFJ81053.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 69-1] gb|EIL46259.1| heme lyase, CcmF subunit [Escherichia coli KD2] gb|ELF55118.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE9] (647 aa) Score: 185 bits (469), Expect: 7.20136e-44 Length: 588, Idn/Pos/Gap = 155/267/77 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLL-LFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + +L I + ++ L L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAVLRISRGTKTTFSYWGMVAAHLG-LAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|NP_311112.1| cytochrome c-type biogenesis protein [Escherichia coli O157:H7 str. Sakai] ref|YP_408517.1| cytochrome c-type biogenesis protein [Shigella boydii Sb227] ref|ZP_02774624.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4113] ref|ZP_02779953.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4401] ref|ZP_02792826.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4486] ref|ZP_02798091.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4196] ref|ZP_02805055.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4076] ref|ZP_02812112.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC869] ref|ZP_02827418.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC508] ref|ZP_03049174.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E110019] ref|ZP_03080958.1| cytochrome c-type biogenesis protein [Escherichia coli O157:H7 str. EC4024] ref|ZP_03248355.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4206] ref|ZP_03253805.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4045] ref|ZP_03261644.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4042] ref|YP_002271608.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4115] ref|ZP_03443171.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. TW14588] ref|YP_003078932.1| heme lyase CcmF [Escherichia coli O157:H7 str. TW14359] ref|ZP_05937627.1| heme lyase, CcmF subunit [Escherichia coli O157:H7 str. FRIK2000] ref|ZP_05951637.1| heme lyase, CcmF subunit [Escherichia coli O157:H7 str. FRIK966] ref|YP_003500265.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O55:H7 str. CB9615] ref|ZP_06662968.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B088] ref|ZP_07120152.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 84-1] ref|ZP_07142106.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 182-1] ref|ZP_07221742.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 78-1] ref|YP_006159840.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O55:H7 str. RM12579] ref|YP_006313718.1| cytochrome c-type biogenesis protein [Escherichia coli Xuzhou21] ref|ZP_11539452.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 85-1] ref|ZP_11656607.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli O157:H7 str. 1044] ref|ZP_11660940.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli O157:H7 str. EC1212] ref|ZP_11669491.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli O157:H7 str. 1125] ref|ZP_11874319.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. G5101] ref|ZP_11888832.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O55:H7 str. 3256-97] ref|ZP_11893389.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O55:H7 str. USDA 5905] ref|ZP_11898677.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. LSU-61] ref|ZP_11992741.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0497] ref|ZP_12035795.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 9.0111] ref|ZP_12232525.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_B2F1] ref|ZP_12290090.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TX1999] ref|ZP_12317162.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_O31] ref|ZP_12332228.1| cytochrome c-type biogenesis protein CcmF [Shigella boydii 3594-74] ref|ZP_13593080.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3A] ref|ZP_13604748.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3C] ref|ZP_13610140.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3D] ref|ZP_13615931.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3E] ref|ZP_13626849.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4A] ref|ZP_13632532.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4B] ref|ZP_13638834.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4C] ref|ZP_13644246.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4D] ref|ZP_13649892.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4E] ref|ZP_13655278.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4F] ref|ZP_13666118.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5B] ref|ZP_13671717.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5C] ref|ZP_13677051.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5D] ref|ZP_13682044.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5E] ref|ZP_13714755.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC7A] ref|ZP_13725127.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC7C] ref|ZP_13730469.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC7D] ref|ZP_13735699.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC7E] ref|ZP_14772731.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA22] ref|ZP_14778499.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA40] ref|ZP_14789810.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW10246] ref|ZP_14795276.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW11039] ref|ZP_14807069.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW10119] ref|ZP_14812549.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1738] ref|ZP_14817949.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1734] ref|ZP_14852770.1| cytochrome c-type biogenesis protein CcmF [Shigella boydii 4444-74] ref|ZP_14885610.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EPECa12] ref|ZP_16248842.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 8.0416] ref|ZP_16254504.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 10.0821] ref|ZP_16260197.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK920] ref|ZP_16267018.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA7] ref|ZP_16968906.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H494] ref|ZP_17699901.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA31] ref|ZP_17815234.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FDA505] ref|ZP_17821196.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FDA517] ref|ZP_17827115.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK1996] ref|ZP_17833081.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK1985] ref|ZP_17838744.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK1990] ref|ZP_17844906.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 93-001] ref|ZP_17850401.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA3] ref|ZP_17856099.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA5] ref|ZP_17861813.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA9] ref|ZP_17867629.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA10] ref|ZP_17873657.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA14] ref|ZP_17879572.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA15] ref|ZP_17885025.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA24] ref|ZP_17890509.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA25] ref|ZP_17896430.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA28] ref|ZP_17902159.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA32] ref|ZP_17907792.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA33] ref|ZP_17913496.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA39] ref|ZP_17919228.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA41] ref|ZP_17925264.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA42] ref|ZP_17930672.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW07945] ref|ZP_17936409.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW09098] ref|ZP_17942185.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW09195] ref|ZP_17948115.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4203] ref|ZP_17953854.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4196] ref|ZP_17959464.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW14313] ref|ZP_17965213.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW14301] ref|ZP_17970639.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4421] ref|ZP_17976431.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4422] ref|ZP_17982100.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4013] ref|ZP_17987598.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4402] ref|ZP_17993288.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4439] ref|ZP_17999028.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4436] ref|ZP_18004957.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4437] ref|ZP_18010647.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4448] ref|ZP_18016329.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1845] ref|ZP_18021738.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1863] ref|ZP_18501541.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3.4870] ref|ZP_18507247.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 5.2239] ref|ZP_18512773.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 6.0172] ref|ZP_18533398.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 8.2524] ref|ZP_18539409.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 10.0833] ref|ZP_18544875.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 10.0869] ref|ZP_18556072.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA34] ref|ZP_18562126.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FDA506] ref|ZP_18578767.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK1999] ref|ZP_18584609.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK1997] ref|ZP_18590878.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli NE1487] ref|ZP_18596760.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli NE037] ref|ZP_18602765.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK2001] ref|ZP_18608065.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA4] ref|ZP_18613750.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA23] ref|ZP_18619788.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA49] ref|ZP_18625700.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA45] ref|ZP_18631298.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TT12B] ref|ZP_18637108.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MA6] ref|ZP_18642860.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 5905] ref|ZP_18648304.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli CB7326] ref|ZP_18654017.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC96038] ref|ZP_18685678.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA38] ref|ZP_18701330.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1735] ref|ZP_18706884.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1736] ref|ZP_18712565.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1737] ref|ZP_18718347.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1846] ref|ZP_18724029.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1847] ref|ZP_18729947.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1848] ref|ZP_18735330.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1849] ref|ZP_18741217.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1850] ref|ZP_18746760.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1856] ref|ZP_18752455.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1862] ref|ZP_18758299.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1864] ref|ZP_18770060.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1866] ref|ZP_18776332.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1868] ref|ZP_18782030.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1869] ref|ZP_18787634.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1870] ref|ZP_18793574.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli NE098] ref|ZP_18799408.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK523] ref|ZP_18810069.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 0.1304] ref|ZP_18972400.1| cytochrome c-type biogenesis protein [Escherichia coli chi7122] ref|ZP_18976956.1| cytochrome c-type biogenesis protein [Escherichia coli] ref|ZP_19020120.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 88.1467] ref|ZP_19025729.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 88.1042] ref|ZP_19031185.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 89.0511] ref|ZP_19037198.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 90.0091] ref|ZP_19042692.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 90.0039] ref|ZP_19048591.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 90.2281] ref|ZP_19053880.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 93.0055] ref|ZP_19059680.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 93.0056] ref|ZP_19065102.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 94.0618] ref|ZP_19070874.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 95.0183] ref|ZP_19076398.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 95.1288] ref|ZP_19082220.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 95.0943] ref|ZP_19087782.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0428] ref|ZP_19093295.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0427] ref|ZP_19099012.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0939] ref|ZP_19110230.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0107] ref|ZP_19125783.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 97.0007] ref|ZP_19131535.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 99.0672] ref|ZP_19137217.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 99.0678] ref|ZP_19142297.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 99.0713] ref|ZP_19358231.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0109] ref|ZP_19363877.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 97.0010] ref|ZP_19910770.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE142] ref|ZP_20143231.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE196] ref|ZP_20231273.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE117] ref|ZP_20316202.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE163] ref|ZP_20320773.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE166] ref|YP_007382131.1| heme lyase subunit CcmF [Escherichia coli APEC O78] dbj|BAB36508.1| cytochrome c-type biogenesis protein [Escherichia coli O157:H7 str. Sakai] gb|ABB66689.1| cytochrome c-type biogenesis protein [Shigella boydii Sb227] gb|EDU35174.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4196] gb|EDU54173.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4113] gb|EDU70999.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4076] gb|EDU76010.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4401] gb|EDU81321.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4486] gb|EDU91288.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC869] gb|EDU94022.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC508] gb|EDV88928.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E110019] gb|EDZ75420.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4206] gb|EDZ82440.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4045] gb|EDZ89129.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4042] gb|ACI38103.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. EC4115] gb|ACI81222.1| cytochrome c-type biogenesis protein [Escherichia coli] gb|ACI81223.1| cytochrome c-type biogenesis protein [Escherichia coli] gb|ACI81224.1| cytochrome c-type biogenesis protein [Escherichia coli] gb|ACI81225.1| cytochrome c-type biogenesis protein [Escherichia coli] gb|EEC27880.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. TW14588] gb|ACT72856.1| heme lyase, CcmF subunit [Escherichia coli O157:H7 str. TW14359] gb|ADD57281.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O55:H7 str. CB9615] gb|EFE62804.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B088] gb|EFJ89302.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 84-1] gb|EFK00964.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 182-1] gb|EFK72675.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 78-1] gb|EFU32889.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 85-1] gb|EFW66822.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli O157:H7 str. EC1212] gb|EFX10742.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. G5101] gb|EFX25431.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O55:H7 str. 3256-97 TW 07815] gb|EFX30402.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O55:H7 str. USDA 5905] gb|EFX34892.1| Cytochrome c-type biogenesis protein CcmF [Escherichia coli O157:H7 str. LSU-61] gb|EGD63361.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli O157:H7 str. 1125] gb|EGD67772.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli O157:H7 str. 1044] gb|EGI98617.1| cytochrome c-type biogenesis protein CcmF [Shigella boydii 3594-74] gb|EGW69926.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_B2F1] gb|EGX22729.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TX1999] gb|EHN88745.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H494] gb|AEZ41285.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O55:H7 str. RM12579] gb|EHU57412.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3A] gb|EHU68808.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3C] gb|EHU74085.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3D] gb|EHU76301.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3E] gb|EHU89966.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4A] gb|EHU94248.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4B] gb|EHV05728.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4C] gb|EHV05893.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4D] gb|EHV10913.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4E] gb|EHV20638.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC4F] gb|EHV30291.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5B] gb|EHV38269.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5C] gb|EHV38498.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5D] gb|EHV47476.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC5E] gb|EHV77810.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC7A] gb|EHV85824.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC7C] gb|EHV91563.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC7D] gb|EHW00825.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC7E] gb|EIH34217.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0497] gb|EII24267.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 9.0111] gb|AFJ29908.1| cytochrome c-type biogenesis protein [Escherichia coli Xuzhou21] gb|EIN21277.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK1996] gb|EIN22530.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FDA517] gb|EIN23489.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FDA505] gb|EIN38553.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 93-001] gb|EIN40043.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK1985] gb|EIN41629.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK1990] gb|EIN53969.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA3] gb|EIN56985.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA5] gb|EIN59521.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA9] gb|EIN71525.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA10] gb|EIN75442.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA15] gb|EIN76063.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA14] gb|EIN86799.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA22] gb|EIN95753.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA25] gb|EIN97246.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA24] gb|EIO00261.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA28] gb|EIO14030.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA31] gb|EIO14297.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA32] gb|EIO16663.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA33] gb|EIO27095.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA40] gb|EIO36894.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA41] gb|EIO38072.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA39] gb|EIO38396.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA42] gb|EIO57804.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW10246] gb|EIO58826.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW07945] gb|EIO64495.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW11039] gb|EIO73510.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW09098] gb|EIO82607.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW10119] gb|EIO92094.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4203] gb|EIO96309.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW09195] gb|EIO96984.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4196] gb|EIP09914.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW14301] gb|EIP11010.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW14313] gb|EIP14172.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4421] gb|EIP23916.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4422] gb|EIP27868.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4013] gb|EIP32596.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4402] gb|EIP39691.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4439] gb|EIP44370.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4436] gb|EIP53448.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4437] gb|EIP55616.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC4448] gb|EIP59131.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1738] gb|EIP66904.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1734] gb|EIP77923.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1863] gb|EIP78811.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1845] gb|EIQ45843.1| cytochrome c-type biogenesis protein CcmF [Shigella boydii 4444-74] gb|EIQ62765.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EPECa12] gb|EJK95616.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_O31] gb|EKG98585.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA7] gb|EKH02310.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK920] gb|EKH05528.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA34] gb|EKH12947.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FDA506] gb|EKH30392.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK1999] gb|EKH36530.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK1997] gb|EKH40439.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli NE1487] gb|EKH46645.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli NE037] gb|EKH52231.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK2001] gb|EKH58124.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA4] gb|EKH68436.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA23] gb|EKH69970.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA49] gb|EKH75195.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA45] gb|EKH83732.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TT12B] gb|EKH88111.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MA6] gb|EKH91916.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 5905] gb|EKI00562.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli CB7326] gb|EKI07259.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC96038] gb|EKI42250.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli PA38] gb|EKI51261.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1735] gb|EKI61515.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1736] gb|EKI65688.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1737] gb|EKI69720.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1846] gb|EKI77978.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1847] gb|EKI80492.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1848] gb|EKI86380.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1849] gb|EKI95107.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1850] gb|EKI97093.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1856] gb|EKJ06013.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1862] gb|EKJ09920.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1864] gb|EKJ25603.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1868] gb|EKJ25756.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1866] gb|EKJ35631.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1869] gb|EKJ42054.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli EC1870] gb|EKJ42657.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli NE098] gb|EKJ51653.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FRIK523] gb|EKJ60982.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 0.1304] gb|EKK27350.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 5.2239] gb|EKK28146.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3.4870] gb|EKK28375.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 6.0172] gb|EKK55349.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 10.0833] gb|EKK56874.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 8.2524] gb|EKK66008.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 10.0869] gb|EKK75227.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 8.0416] gb|EKK86097.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 10.0821] emb|CCK47440.1| cytochrome c-type biogenesis protein [Escherichia coli chi7122] emb|CCJ44713.1| cytochrome c-type biogenesis protein [Escherichia coli] gb|EKV75323.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 88.1042] gb|EKV77609.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 89.0511] gb|EKV78762.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 88.1467] gb|EKV91029.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 90.0091] gb|EKV93420.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 90.2281] gb|EKV96556.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 90.0039] gb|EKW09716.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 93.0056] gb|EKW10167.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 93.0055] gb|EKW13668.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 94.0618] gb|EKW27628.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 95.0183] gb|EKW28176.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 95.0943] gb|EKW30659.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 95.1288] gb|EKW41370.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0428] gb|EKW44076.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0427] gb|EKW47640.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0939] gb|EKW62562.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0107] gb|EKW78004.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 97.0007] gb|EKW81544.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 99.0672] gb|EKW89921.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 99.0678] gb|EKW90806.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 99.0713] gb|EKY38667.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0109] gb|EKY40232.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 97.0010] gb|ELF12111.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE142] gb|ELH38390.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE196] gb|ELI29933.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE117] gb|ELJ13539.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE163] gb|ELJ23401.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE166] gb|AGC87687.1| heme lyase subunit CcmF [Escherichia coli APEC O78] (647 aa) Score: 185 bits (469), Expect: 7.20136e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_002796084.1| Cytochrome c-type biogenesis protein CcmF precursor [Laribacter hongkongensis HLHK9] gb|ACO75075.1| Cytochrome c-type biogenesis protein CcmF precursor [Laribacter hongkongensis HLHK9] (643 aa) Score: 185 bits (469), Expect: 7.32254e-44 Length: 563, Idn/Pos/Gap = 151/245/46 (26%/43%/8%) Query: 68 DFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVKL 127 DFS+ +VV+ SS P +Y+L +W +EGSL L + L ++ + L ++ Sbjct: 68 DFSVRYVVQQSSSQLPLVYRLAAVWGGHEGSLLL-WLLLLCVWTLAVALCSRSLDDAMRA 126 Query: 128 TFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLIYIS 187 + I F L F R D +EG ELN +LQD +++HPPL+Y+ Sbjct: 127 RLVAIMGLIAAGFGFFLLLTSNPFARLDI----PAVEGRELNPMLQDPGLIVHPPLLYMG 182 Query: 188 YASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWGGFW 246 Y +++ F+++ L+ + R + W + I +GS WAY ELGWGG+W Sbjct: 183 YVGFAVAFAMALAGLMAGRIDAAWARFARPWTTLAWVNLTAGIAVGSLWAYYELGWGGWW 242 Query: 247 FWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSGLLQ 306 FWD VE S +PWL AL+HSL K + + ++ L + + + ++G LVRSG+L Sbjct: 243 FWDPVENASFMPWLAGTALMHSLAATEKRGVFKSWTVLLAILTFSLSLLGTFLVRSGVLS 302 Query: 307 SVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSI---FDLNNHYNFVYYIFLLV 363 SVH F + P + L V + + +V+ + TS L+ + LL Sbjct: 303 SVHAFASDPGRGVFILALLAVVVGVSLVLFAVRAPDLTSTAGFAPLSRESLLLANNVLLC 362 Query: 364 ILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSWK---- 419 + LL LY P ++ N L +FN + + + LL LI + WK Sbjct: 363 VATASVLLGTLY-PLMVDALNLGKLSVGPPYFNAVFIPVMLPLLLLIGPGSVVRWKRQAG 421 Query: 420 -----------LIFIFLGIIIIGGIRGF-PEIFLALYFFIYLLLFTLILIIK-----QKF 462 L L I+ G + F P + LAL+ ++++L L +++ Q+ Sbjct: 422 MELVKGLWHVLLASAVLAIVWSGTLAPFSPLVALALFAALWIILGALWDLLRRWRAGQRP 481 Query: 463 SFIV-----YHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFIIIFRDLNHIWST 517 H ++ + L + Y E + + G + L + D+ Sbjct: 482 GLATLGMHLAHVGVAVTVIGIALTSGYERERDVRLAAGGSATLG-AYRFTLEDIGDSNGP 540 Query: 518 NYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY-QSLINTKSIIYTNLMSDVYILLG 576 NYL +TD P+ VL EKR Y + T++ I+ + VY+ L Sbjct: 541 NYLGVTARLTVTDNGAPLA------VLTPEKRIYASMPGMPMTEASIHAGFFNHVYVALA 594 Query: 577 DGNFENG-WYSRILFMPFISWFW 598 D E+G W R+ PF+ W W Sbjct: 595 D-QLEDGSWGVRLYHKPFVGWIW 616
ref|ZP_13561470.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1D] gb|EHU22308.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1D] (647 aa) Score: 185 bits (469), Expect: 7.44576e-44 Length: 587, Idn/Pos/Gap = 152/265/75 (25%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I ++ D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGDITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_13598784.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3B] ref|ZP_14801076.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW09109] ref|ZP_18527973.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 8.0586] ref|ZP_18550545.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 88.0221] ref|ZP_18567395.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FDA507] ref|ZP_18573161.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FDA504] ref|ZP_19104702.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0932] gb|EHU58031.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC3B] gb|EIO73624.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW09109] gb|EKH17046.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FDA507] gb|EKH24620.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli FDA504] gb|EKK46282.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 8.0586] gb|EKK70759.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 88.0221] gb|EKW55550.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 96.0932] (646 aa) Score: 185 bits (469), Expect: 7.57105e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 61 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 120 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 121 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 169 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 170 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 228 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 229 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 288 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 289 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 348 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 349 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 408 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 409 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 459 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 519 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 573 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 619
ref|ZP_09201493.1| c-type cytochrome biogenesis protein CcmF [SAR116 cluster alpha proteobacterium HIMB100] gb|EHI48131.1| c-type cytochrome biogenesis protein CcmF [SAR116 cluster alpha proteobacterium HIMB100] (654 aa) Score: 185 bits (469), Expect: 7.57105e-44 Length: 597, Idn/Pos/Gap = 151/258/56 (25%/43%/9%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+ V S +P +YK+ W N+EGSL L + + +++ ++ ++T + Sbjct: 68 VVSDFSVALVASHSHSAKPLIYKISGTWGNHEGSLLL-WIVILVLFSAVLSLSRQQMTAL 126 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFTVLEGNELNFLLQDINILIHPP 182 +K V I+ +FL+ +L F R + ++G LN +LQDI + +HPP Sbjct: 127 LKARVLA-VQGIV-TTAFLAFSLFTSNPFERLEL----APVDGRGLNPILQDIGLALHPP 180 Query: 183 LIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELG 241 ++Y+ Y S+ FS + LI + +R W + I LGS WAY ELG Sbjct: 181 MLYLGYVGLSMAFSFAVAALISGQADKGWARAMRPWVSAAWCALTLGIALGSWWAYYELG 240 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE SL+PWL + ALLHS+L+ K ++ ++ L + + + ++G +VR Sbjct: 241 WGGWWFWDPVENASLMPWLAATALLHSILVVEKSGQLKSWTILLAIMAFSLSLVGTFIVR 300 Query: 302 SGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD---LNNHYNFVYY 358 SGLL SVH+F + P + L LV I I +V+ + S L+ + Sbjct: 301 SGLLTSVHSFASDPARGVFILGILLVSIGIPLVLFAWRGPQLASQTQASLLSREAGLIAN 360 Query: 359 IFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINSW 418 FLL + L+ Y P ++ + +F+ +G+L+ + + W Sbjct: 361 NFLLTAATLIVLIGTFY-PLGLEVATGARITVGPPYFDATFNPVMGLLVVCMAGGPLLVW 419 Query: 419 KLIF------------IFLGIIIIGGIR-----------------------GFPEIFLAL 443 + I GI+++GG G I Sbjct: 420 RAGALPSARTALIAGGIGAGILVVGGATLVAGLSAAALAGLALVGWLGLSIGGDIIARLK 479 Query: 444 YFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDN 503 L L I + + HF ++ L ++ E I G T++L Sbjct: 480 PIHSGSLAGRLAHITGPVWGMWIAHFGMVVFLIGALGEGLFQTEVITRAKPGDTIMLAGR 539 Query: 504 FIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSII 563 F + NY + + D + +V+ EKRFY T++ I Sbjct: 540 -TATFTGIEARQGPNYQTETALIELRD------EGQLVSVMTPEKRFYPAARQTTTEAAI 592 Query: 564 YTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSLFRCIKNFQ 620 + D Y++LGDG+ +G+ R+ P +S+ WLG + + + ++F ++ Q Sbjct: 593 RSRFNGDDYMVLGDGDAASGYTLRLYHKPLVSFIWLGAVMMALGALVAIFTRPRHRQ 649
ref|ZP_10287653.1| cytochrome C biogenesis protein ccmF [Pseudoalteromonas piscicida JCM 20779] (652 aa) Score: 185 bits (469), Expect: 7.69845e-44 Length: 588, Idn/Pos/Gap = 154/264/66 (26%/44%/11%) Query: 63 ILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLT 122 I L+ DF++ +V SS P YK+ + W +EG++ L +Q + + + + L Sbjct: 60 ITLMDDFTVAYVAHHSSSTLPWYYKITSTWGGHEGAILLWLVMQSM-WTMLVAVMLKSLP 118 Query: 123 LIVKLTF-----FYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 +++ F V F+L+ + S F+ + +EG +LN LLQD + Sbjct: 119 WVLRARVLGVLGFLGVGFMLYTLWMSS--------PFERLLPYFPVEGRDLNPLLQDPGM 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWA 236 +IHPPL+Y+ Y S+ FS + L+ K R + W + I +GS WA Sbjct: 171 IIHPPLLYMGYVGLSVSFSFAIAALLTGKLDNTWAKWSRPWTMAAWGFLTLGITIGSWWA 230 Query: 237 YTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIG 296 Y+ELGWGG+WFWD VE SL+PWL++ ALLHSL + K + + ++ L + + + ++G Sbjct: 231 YSELGWGGWWFWDPVENASLMPWLVATALLHSLAVTEKRGVFKSWTVLLAITAFSLCLLG 290 Query: 297 IILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFV 356 +VRSG++ SVH F P+ + + L F+ +++ L Y + Y F+ Sbjct: 291 TFIVRSGIIVSVHAFATDPDRGL----YILSFLAVVVGGSLALYALRVAQVYSEGRYQFI 346 Query: 357 YYIFLL------VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILLLFIGILL 407 L +++ L +L P + K ++ FFN+ IL++ ILL Sbjct: 347 SREVALWINNIFLVVATLIVLLGTLLPMIHKELGLGSISIGVPFFNQMFAILIVPFAILL 406 Query: 408 TLIIIF---------LINSW-KLIFIFLGIIIIGGIRGF----PEIFLALYFFIYLLLFT 453 L + L+ W LI + L + + P F+A +++ + T Sbjct: 407 GLAPMLRWKQNKMPPLVKKWAALIAVSLVLTATWLYSSYEVVAPLTFVATALAVWISVAT 466 Query: 454 L------------ILIIKQK-----FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGK 496 + I +K ++ ++ H F++ S+ L + Y E ++ G+ Sbjct: 467 AADLFNKVTVHPSVAIGFKKLGLSYWAMVLGHVGIAFVIASVTLTSAYSVERSVSMKPGE 526 Query: 497 TLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSL 556 T +LN+ + F + I NY G ++T F N L +EKR Y Sbjct: 527 TAMLNE-YEYRFDGVKEIRGPNYGGHAG--VVTVFKN----GKKVTELHAEKRRYDVGMQ 579 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 T++ I D+Y+ LG+ W RI P++ W WLGG+ + Sbjct: 580 FMTEAAIDDGFFRDLYLALGEPLSAGAWSLRIYHKPYVRWMWLGGLLI 627
ref|ZP_11033115.1| c-type cytochrome biogenesis protein CcmF [Rhizobium sp. CF142] gb|EJJ28627.1| c-type cytochrome biogenesis protein CcmF [Rhizobium sp. CF142] (664 aa) Score: 185 bits (469), Expect: 7.828e-44 Length: 589, Idn/Pos/Gap = 160/259/78 (27%/43%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+ V E S P +YK +W N+EGS+ L + L ++ + F L Sbjct: 62 VVSDFSVQNVWENSHSLVPLIYKYSGVWGNHEGSMML-WLLILALFSALVAIFGRNLPDT 120 Query: 125 VK-----LTFFYNVYFILFNISFLSLTLLLI---FLRFDFFFNFTVLEGNELNFLLQDIN 176 +K + + +V FILF +LL F+R D EG +LN +LQDI Sbjct: 121 LKANVLAVQAWISVAFILF--------ILLTSNPFVRLDP----APAEGRDLNPVLQDIG 168 Query: 177 ILIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSR 234 + IHPPL+Y+ Y +S+ FS + L+ + + +R L W + I +GS Sbjct: 169 LAIHPPLLYLGYVGFSVCFSFAVAALL-DGRIDAAWARWVRPWTLAAWTFLTLGIAMGSY 227 Query: 235 WAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVII 294 WAY ELGWGG+WFWD VE S +PWL ALLHS L+ K +++ ++ L + + + + Sbjct: 228 WAYYELGWGGWWFWDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAILTFSLSL 287 Query: 295 IGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFD 348 +G LVRSG+L SVH F + P+ + L L+FI F LL F I Sbjct: 288 MGTFLVRSGVLTSVHAFASDPSRGVFILCILLIFIGGALSLFAFRAPLLSAGGLFAPI-- 345 Query: 349 LNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLT 408 + V +L + L LY P +++ + + FFN L + LL Sbjct: 346 -SREGALVVNNLILTVACGTVLTGTLY-PLVLETLTGDKISVGPPFFNLTFGLLMAPLLI 403 Query: 409 LIIIFLINSWK---------LIFIFLGIIIIGGI------RGFPEIF-LALYFFIYLLLF 452 ++ + +WK +++ G+ + + G P + L L ++L+L Sbjct: 404 VVPFGPLLAWKRGDLLGALQRLYVVAGLAFVAALVFFYLEHGGPVMAVLGLAAGLFLILG 463 Query: 453 T---------------------LILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILN 491 L + + F + H +L ++ +T + E ++ Sbjct: 464 AAADLWYRAGIGKVKAEIAWRRLTGLPRSAFGTALAHAGLGVTVLGIVAVTTFQSEHVVE 523 Query: 492 FSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFY 551 G++ + I+F + NY G+F I I +V +S KR Y Sbjct: 524 MKQGQSTDAG-GYGIVFDGMQPATGPNYTEDRGHFSIR-----RGGAEIADV-WSAKRLY 576 Query: 552 LYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLG 600 + + T++ I T +S +Y+ LGD + G RI + PFI W G Sbjct: 577 TARQMPTTEAGILTFGLSQLYVSLGDATHDGGIVVRIWWKPFILCIWGG 625
ref|ZP_06191164.1| hypothetical protein SOD_c05180 [Serratia odorifera 4Rx13] ref|ZP_16221188.1| cytochrome c-type biogenesis protein CcmF [Serratia plymuthica A30] gb|EFA16670.1| hypothetical protein SOD_c05180 [Serratia odorifera 4Rx13] gb|EKF63366.1| cytochrome c-type biogenesis protein CcmF [Serratia plymuthica A30] (656 aa) Score: 185 bits (469), Expect: 7.95973e-44 Length: 591, Idn/Pos/Gap = 152/263/76 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DF++ +V S+ P Y++ W +EGSL L + ++ + + L Sbjct: 62 VVNDFTVAYVAANSNSQLPVYYRIAATWGAHEGSLLL--------WVLLLSCWSLAVALC 113 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTV----LEGNELNFLLQDINILIH 180 + V +L + ++ LL + F T+ ++G++LN LLQDI ++ H Sbjct: 114 SRSMPQDAVARVLSVMGMITAGFLLFIIMTSNPFTRTLPNFPIDGSDLNPLLQDIGLIFH 173 Query: 181 PPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PPL+Y+ Y +S+ F+ + L+ + R W + I+LGS WAY E Sbjct: 174 PPLLYMGYVGFSVAFAFAIASLMAGRLDTAWARWSRPWTTAAWVFLTLGIVLGSAWAYYE 233 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G L Sbjct: 234 LGWGGWWFWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAITAFSLCLLGTFL 293 Query: 300 VRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 VRSG+L SVH+F + P + I Y +V L++ +K + + H F Sbjct: 294 VRSGVLVSVHSFASDPARGMFILAYLVIVIGGSLLLYAVKGGQVRSRV----QHETFSRE 349 Query: 359 IFL-----LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 FL L+I L +L P + K ++ FFN + LL+ IG Sbjct: 350 TFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMAPMALLMGIG 409 Query: 405 ILLTLIIIFLINSWKLIFIFLGIIII----------GGIRGFPEIFLALYFFIYLLLFTL 454 L+ W+ + + L I ++ I G + L +++++ TL Sbjct: 410 PLVRWRRDEPTKLWRRLSVALAITLVLSILLPWLLQDSIAGM--TVVGLIMAVWVIILTL 467 Query: 455 ILIIKQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILNFSIGKTLLL 500 + + ++ H + F+ LS L +T+ G F N+S+ + + + Sbjct: 468 MELHER-----ATHRHGFWRGLSHLSRSHWGMVLGHLGVAVTVIGIAFSQNYSVERDVRM 522 Query: 501 --NDNFII-----IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 D+ I +FRD++ I NY G +T P + L +EKR+Y Sbjct: 523 KAGDSVDIHSYHFVFRDVHDIRGPNYSGGVGIIDVTRNGKP------EATLHAEKRYYSV 576 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I D+Y LG+ + W R+ + PF+ W W GG+F+ Sbjct: 577 ARSMMTEAAIDGGFSRDLYAALGEELDDGSWAVRLYYKPFVRWIWFGGVFM 627
ref|ZP_19853380.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE75] gb|ELE55028.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE75] (647 aa) Score: 184 bits (468), Expect: 8.02642e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAMLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRNGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_04625161.1| Cytochrome c-type bioproteinsis protein ccmF [Yersinia kristensenii ATCC 33638] gb|EEP90385.1| Cytochrome c-type bioproteinsis protein ccmF [Yersinia kristensenii ATCC 33638] (637 aa) Score: 184 bits (468), Expect: 8.09367e-44 Length: 609, Idn/Pos/Gap = 156/269/94 (25%/44%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DF++ +V S+ + P +++ W +EGSL L + ++ + + L Sbjct: 44 VVNDFTVSYVAANSNSHLPVYFRIAATWGAHEGSLLL--------WVLLLSCWSLAVALF 95 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTV----LEGNELNFLLQDINILIH 180 + V +L + ++ LL + FN T+ ++GN+LN LLQD+ ++ H Sbjct: 96 SRSMPDDAVARVLSVLGMITGGFLLFIILTSNPFNRTLPDFPIDGNDLNPLLQDVGLIFH 155 Query: 181 PPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTE 239 PPL+Y+ Y +S+ F+ + L+ + R W + I+LGS WAY E Sbjct: 156 PPLLYMGYVGFSVAFAFAIASLMAGRLDSAWARWSRPWTQAAWVFLTMGIVLGSAWAYYE 215 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G L Sbjct: 216 LGWGGWWFWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLMGTFL 275 Query: 300 VRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYY 358 VRSG+L SVH+F + P + I Y +V L++ +K + H F Sbjct: 276 VRSGVLVSVHSFASDPARGMFILAYLVIVIGGSLLLYAVKG----AQVRSRTQHEVFSRE 331 Query: 359 IFL-----LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 FL L+I L +L P + K ++ FFN + LL+ IG Sbjct: 332 TFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMAPMALLMGIG 391 Query: 405 IL----------------LTLIIIFLIN---SWKLIFIFLGIIIIGGIRGFPEIFLALYF 445 L + L++ L++ W L G+ ++G L Sbjct: 392 PLVRWRRDEPSKLYKRLGVALVVTLLLSILVPWLLQDTIAGMTVVG-----------LMM 440 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILN 491 I++++ T++ + ++ H + F+ LS L +T+ G F N Sbjct: 441 AIWVIILTVMELHER-----ATHRHGFWRGLSHLSRSHWGMVLGHLGVAVTVIGIAFSQN 495 Query: 492 FSIGKTLLLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVL 544 +S+ + + + I +FRD++ I NY G +T P + L Sbjct: 496 YSVERDVRMKAGDSIDIHDYHFVFRDVHDIKGPNYTGGVGIIDVTRNGKP------EATL 549 Query: 545 FSEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 +EKR+Y + T++ I L D+Y LG+ + W R+ + PF+ W W GG+F+ Sbjct: 550 HAEKRYYSVARSMMTEAAIDGGLTRDLYAALGEELDDGSWAVRLYYKPFVRWIWYGGVFM 609 Query: 605 LDSIIFSLF 613 IF +F Sbjct: 610 AIGGIFCMF 618
ref|YP_006664832.1| cytochrome c-type biogenesis protein cycK [Bartonella quintana RM-11] gb|AFR26118.1| cytochrome c-type biogenesis protein cycK [Bartonella quintana RM-11] (662 aa) Score: 184 bits (468), Expect: 8.16148e-44 Length: 609, Idn/Pos/Gap = 175/279/92 (28%/45%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL--- 121 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L + L + T + F L Sbjct: 62 MVSDFSVLNVVENSHSEKPMLYKITGVWGNHEGSMLL-WVLSLAFFSTLMALFSQHLPEQ 120 Query: 122 --TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 TLI+ + F++F + FLS L I N L+GN+LN LLQDI + I Sbjct: 121 FKTLILVCQSWIISAFLVF-VLFLSNPFLRI--------NPPALQGNDLNPLLQDIALAI 171 Query: 180 HPPLIYISYASYSIIFSISFTILIIKC--KFYVLYILRFLNLIGWFIASFSILLGSRWAY 237 HPPL+Y+ +S+ FS + L++ + ++ +L L+ W + I++GS WAY Sbjct: 172 HPPLLYLGSVGFSLCFSFAVAALVMGHIDGRWAHWVRPWL-LLAWCFLTLGIMVGSYWAY 230 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE S +PWL A LHS L+ K ++ +LFL + + + ++G Sbjct: 231 YELGWGGYWFWDPVENASFMPWLSGTAFLHSALVLEKRETLKSWTLFLALLTFSLSLMGT 290 Query: 298 ILVRSGLLQSVHTFVNSP---NFLIIFLYFFLV---FIFILIVILLKKYTYFTSIFDLNN 351 LVRSGLL SVH+F P ++ L+FF F+F L V +LK F I + Sbjct: 291 FLVRSGLLVSVHSFAIDPARGRAILALLFFFTGGAFFLFALRVPILKAGRLFRPI----S 346 Query: 352 HYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFN--------------- 396 F+ LL+ +L +P+ I+ + FFN Sbjct: 347 REGFIVLNNLLLTTITATVLIGTLYPYFIEALTGKKISVGAAFFNITCGPLMILLLLLVP 406 Query: 397 -----------------KILLLFIGILLTLIIIFLINSWKLIFIFLGI-----IIIGGI- 433 ++ ++ + + I F S + IF LGI + +G + Sbjct: 407 FGSMMVWKSGDFLAVFERLWVVCVLACVACFITFYATSLRDIFAALGIGLSVFVFLGSLA 466 Query: 434 -----RGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEF 488 G ++ L++ F ++ L + F + H + ++ + + +E Sbjct: 467 DLWKKSGHHKLALSVRFKRFIGLPWSV------FGAAMAHMGLAVTLFGIVCVATFAQER 520 Query: 489 ILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYEN---IQNVLF 545 IL IG + + I F ++ NY + NF + YEN ++NV+ Sbjct: 521 ILTMHIGDRVTIAGK-TICFDKVHESAGPNYSAMEFNFTV--------YENKHAVRNVIA 571 Query: 546 SEKRFYLYQSLINTK-SIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 S KRFY Q++ T+ I L+S +YI G + + G + + P++ WLG I + Sbjct: 572 S-KRFYSSQNISTTEVGIQNHGLLSQLYIAPGHID-DQGLVVHLWWKPYVICVWLGAIMM 629 Query: 605 LDSIIFSLF 613 FSLF Sbjct: 630 AMGGCFSLF 638
ref|ZP_12337871.1| cytochrome c-type biogenesis protein CcmF [Shigella boydii 5216-82] gb|EGI98237.1| cytochrome c-type biogenesis protein CcmF [Shigella boydii 5216-82] (647 aa) Score: 184 bits (468), Expect: 8.29882e-44 Length: 595, Idn/Pos/Gap = 156/265/91 (26%/44%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVSFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L+ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLAAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILI-----IKQKFSF---IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 +I +L + K FS+ + H L +TI G F N+S+ + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLG--------LAVTIVGIAFSQNYSVERD 512 Query: 498 LLLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRF 550 + + + FRD+ + N+ +T P + VL++EKR+ Sbjct: 513 VRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRY 566 Query: 551 YLYQSLINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 Y + T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 567 YNTAGSMMTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_005417277.1| Cytochrome c-type biogenesis protein CcmF [Rhodospirillum photometricum DSM 122] emb|CCG08307.1| Cytochrome c-type biogenesis protein CcmF [Rhodospirillum photometricum DSM 122] (697 aa) Score: 184 bits (468), Expect: 8.50917e-44 Length: 593, Idn/Pos/Gap = 151/260/74 (25%/43%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS++ V+E S ++P LYK+ +W N+EGSL L ++ + F+F + +L Sbjct: 96 VVSDFSLVNVIENSHTDKPLLYKVSGVWGNHEGSLLL--WIVILAAFSFAMSLLGG-SLP 152 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFF---NFTVLEGNELNFLLQDINILIHP 181 L L FL L ++F F + G LN +LQD + HP Sbjct: 153 PALRARALAIQALIITGFL---LFILFTSNPFLRVPEGMAPINGQGLNPMLQDPGLAFHP 209 Query: 182 PLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTE 239 P++Y Y +S+ FS++ LI + + + +R LI W + I LGS WAY E Sbjct: 210 PMLYAGYVGFSMAFSLAIAALI-EGRVDAAWARWVRPWTLIAWVFLTLGIALGSWWAYYE 268 Query: 240 LGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIIL 299 LGWGG+W+WD VE S +PWL ALLHS ++ K ++ ++FL + + + ++G L Sbjct: 269 LGWGGWWYWDPVENASFIPWLAGTALLHSAIVVEKRDSLKAWTVFLAIVTFSLSLVGTFL 328 Query: 300 VRSGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFDLNNHY 353 VRSG++ SVH F P + L V I F + +LK F + + Sbjct: 329 VRSGVITSVHAFATDPTRGLFILILLAVTIGGSLTLFAVRAPVLKAGGLFAPV---SREG 385 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIF 413 + + L+ LL LY P + + + FFN + + + ++ L+ + Sbjct: 386 SLLVNNLLMSTASLTVLLGTLY-PLIADAFQWGKVTVGAPFFNSVFVPLMVPMVALMAVG 444 Query: 414 LINSWKLI-------------FIFLGIIII-----GGIRGFPEIFLALYFFI--YLLLFT 453 + SWK +GI ++ GG G E+ A F + +L + T Sbjct: 445 PMLSWKRADLAGALGRLKVAFGAAVGIALLTYGLAGG--GLAEVGAAFGFGLAAWLAVGT 502 Query: 454 LI---------------------LIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNF 492 L+ L + + ++ H +++ + T + +E + Sbjct: 503 LVDLSERLRLGREPWTEVQRRLRLQPRATWGLVLGHLGTALVVVGIAGNTAWKQEAVQAL 562 Query: 493 SIGKTL-LLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFY 551 G++ L F ++ L NY S G +T + VL E+R Y Sbjct: 563 KPGESKDLAGTTFTLVDVALEE--GPNYTSITGTVRLTRDGQEIA------VLHPERRAY 614 Query: 552 LYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T+S I+TN +SD + ++G+ + G+ +R + P + + W G + + Sbjct: 615 RTPPMPTTESAIHTNGLSDTHAVIGEPTGDGGFVTRFYYEPAVPFLWYGALLM 667
ref|ZP_20382733.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE94] gb|ELJ85529.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE94] (647 aa) Score: 184 bits (468), Expect: 8.58047e-44 Length: 588, Idn/Pos/Gap = 152/265/75 (25%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFLL 605 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ ++ Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMMV 621
ref|ZP_20081870.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE144] gb|ELG83213.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE144] (647 aa) Score: 184 bits (468), Expect: 8.58047e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_002557091.1| Cytochrome c-type biogenesis protein ccmF [Escherichia coli LF82] ref|YP_006120578.1| heme lyase, CcmF subunit [Escherichia coli O83:H1 str. NRG 857C] emb|CAP76698.1| Cytochrome c-type biogenesis protein ccmF [Escherichia coli LF82] gb|ADR27644.1| heme lyase, CcmF subunit [Escherichia coli O83:H1 str. NRG 857C] (647 aa) Score: 184 bits (468), Expect: 8.65236e-44 Length: 586, Idn/Pos/Gap = 155/262/73 (26%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINS----WKLIFIFLGIIIIGGIRGFPEIFLALYFFIYL 449 L+ L+II I++ L ++F ++ + G I Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLGLAMACWIAVLAIAE 469 Query: 450 LLFTLILIIKQKFSF---IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFII 506 + L K FS+ + H L +TI G F N+S+ + + + + Sbjct: 470 AALRISLGTKTTFSYWGMVAAHLG--------LAVTIVGIAFSQNYSVERDVRMKSGDSV 521 Query: 507 -------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 FRD+ + N+ +T P + VL++EKR+Y + T Sbjct: 522 DIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMMT 575 Query: 560 KSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 ++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 576 EAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_14838436.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-315] gb|EIQ20415.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-315] (647 aa) Score: 184 bits (468), Expect: 8.72485e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|NP_416700.1| heme lyase, CcmF subunit [Escherichia coli str. K-12 substr. MG1655] ref|YP_001731136.1| heme lyase, CcmF subunit [Escherichia coli str. K-12 substr. DH10B] ref|YP_001744389.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli SMS-3-5] ref|ZP_03068466.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 101-1] ref|YP_002293739.1| cytochrome c-type biogenesis protein [Escherichia coli SE11] ref|YP_002403475.1| heme lyase, CcmF subunit [Escherichia coli 55989] ref|YP_002927166.1| heme lyase, CcmF subunit [Escherichia coli BW2952] ref|YP_002999863.1| cytochrome c-type biogenesis protein, subunit of CcmEFGH holocytochrome c synthetase [Escherichia coli BL21(DE3)] ref|YP_003035711.1| cytochrome C assembly protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] ref|YP_003045316.1| heme lyase, CcmF subunit [Escherichia coli B str. REL606] ref|YP_003054717.1| heme lyase, CcmF subunit [Escherichia coli BL21(DE3)] ref|ZP_07099309.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 107-1] ref|ZP_07135412.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 115-1] ref|ZP_07145840.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 187-1] ref|ZP_07163988.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 116-1] ref|ZP_07169106.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 175-1] ref|ZP_08343960.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H736] ref|YP_005277249.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KO11FL] ref|ZP_10058927.1| cytochrome c-type biogenesis protein CcmF [Escherichia sp. 4_1_40B] ref|YP_006091422.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DH1] ref|YP_006125072.1| heme lyase, CcmF subunit [Escherichia coli W] ref|YP_006164655.1| heme lyase, CcmF subunit [Escherichia coli KO11FL] ref|YP_006173791.1| heme lyase, CcmF subunit [Escherichia coli W] ref|YP_006115888.1| cytochrome C-type biogenesis protein [Escherichia coli ETEC H10407] ref|YP_006129532.1| heme lyase, CcmF subunit [Escherichia coli DH1] ref|YP_490434.1| heme lyase, CcmF subunit [Escherichia coli str. K-12 substr. W3110] ref|ZP_10980730.1| cytochrome c-type biogenesis protein CcmF [Escherichia sp. 1_1_43] ref|YP_006783470.1| heme lyase, CcmF subunit [Escherichia coli O104:H4 str. 2009EL-2071] ref|YP_006778399.1| heme lyase, CcmF subunit [Escherichia coli O104:H4 str. 2011C-3493] ref|YP_006769343.1| heme lyase, CcmF subunit [Escherichia coli O104:H4 str. 2009EL-2050] ref|ZP_11505138.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli LT-68] ref|ZP_11542629.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 79-10] ref|ZP_11986991.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 1.2264] ref|ZP_12033135.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 5.0959] ref|ZP_12047228.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 2.3916] ref|ZP_12059116.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 2.4168] ref|ZP_12065028.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3.2303] ref|ZP_12079430.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B41] ref|ZP_12259346.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_DG131-3] ref|ZP_12264124.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_EH250] ref|ZP_12269205.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli G58-1] ref|ZP_12285340.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_S1191] ref|ZP_12452711.1| heme lyase, CcmF subunit [Escherichia coli O104:H4 str. LB226692] ref|ZP_12479950.1| heme lyase, CcmF subunit [Escherichia coli O104:H4 str. 01-09591] ref|ZP_12508525.1| hypothetical protein C22711_0410 [Escherichia coli O104:H4 str. C227-11] ref|ZP_12590559.1| heme lyase, CcmF subunit [Escherichia coli XH140A] ref|ZP_12616291.1| heme lyase, CcmF subunit [Escherichia coli XH001] ref|ZP_12915385.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli UMNF18] ref|ZP_13509363.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli J53] ref|ZP_13687873.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC6A] ref|ZP_13693974.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC6B] ref|ZP_13699161.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC6C] ref|ZP_13709456.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC6E] ref|ZP_13719546.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC7B] ref|ZP_13887237.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC13A] ref|ZP_13891614.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC13B] ref|ZP_13896949.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC13C] ref|ZP_13901999.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC13D] ref|ZP_13906992.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC13E] ref|ZP_13911823.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC14A] ref|ZP_14328985.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli AI27] ref|ZP_14334192.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O32:H37 str. P4] ref|ZP_14440155.1| heme lyase, CcmF subunit [Escherichia coli 541-15] ref|ZP_14455657.1| heme lyase, CcmF subunit [Escherichia coli 75] ref|ZP_16215212.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli AD30] ref|ZP_16431807.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 117-3] ref|ZP_16816046.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E1167] ref|ZP_16820532.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E1520] ref|ZP_16825646.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E482] ref|ZP_16839552.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H489] ref|ZP_16843255.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TA007] ref|ZP_16853217.1| cytochrome c-type biogenesis protein CcmF [Escherichia fergusonii B253] ref|ZP_16867840.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli M919] ref|ZP_16979093.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. C227-11] ref|ZP_16985975.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. C236-11] ref|ZP_16991040.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 09-7901] ref|ZP_16994701.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 04-8351] ref|ZP_17001262.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-3677] ref|ZP_17010464.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4404] ref|ZP_17015619.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4522] ref|ZP_17021431.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4623] ref|ZP_17029243.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4632 C1] ref|ZP_17034355.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4632 C2] ref|ZP_17036077.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4632 C3] ref|ZP_17042763.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4632 C4] ref|ZP_17049727.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4632 C5] ref|ZP_17678848.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H730] ref|ZP_18517410.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 8.0566] ref|ZP_18522034.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 8.0569] ref|ZP_18674947.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW00353] ref|ZP_18680054.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3006] ref|ZP_19254731.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-9450] ref|ZP_19303705.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02030] ref|ZP_19313543.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02033-1] ref|ZP_19317252.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02092] ref|ZP_19323100.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02093] ref|ZP_19328878.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02281] ref|ZP_19330469.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02318] ref|ZP_19338908.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02913] ref|ZP_19343767.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-03439] ref|ZP_19349242.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-04080] ref|ZP_19354410.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-03943] ref|ZP_19370171.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-9990] ref|ZP_19374293.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-9941] ref|ZP_19380148.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-4984] ref|ZP_19385163.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-5604] ref|ZP_19390964.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-4986] ref|ZP_19394889.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-4987] ref|ZP_19401412.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-4988] ref|ZP_19407080.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-5603] ref|ZP_19409749.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-6006] ref|ZP_19417332.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec12-0465] ref|ZP_19420630.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec12-0466] ref|ZP_19613521.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE10] ref|ZP_19660272.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE44] ref|ZP_19727917.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE212] ref|ZP_19771445.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE234] ref|ZP_19801030.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE51] ref|ZP_19863822.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE77] ref|ZP_19873312.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE81] ref|ZP_19906797.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE119] ref|ZP_19921325.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE156] ref|ZP_19927396.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE161] ref|ZP_19940089.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE171] ref|ZP_19972467.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE42] ref|ZP_20000030.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE48] ref|ZP_20040284.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE91] ref|ZP_20065799.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE135] ref|ZP_20134427.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE184] ref|ZP_20147592.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE197] ref|ZP_20235926.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE120] ref|ZP_20278853.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE138] ref|ZP_20358642.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE232] ref|ZP_20378267.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE90] ref|ZP_21010183.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli O10:K5(L):H4 str. ATCC 23506] ref|ZP_21017985.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli O5:K4(L):H4 str. ATCC 23502] sp|P33927.1|CCMF_ECOLI RecName: Full=Cytochrome c-type biogenesis protein CcmF gb|AAA16388.1| yejR [Escherichia coli] gb|AAC75256.1| heme lyase, CcmF subunit [Escherichia coli str. K-12 substr. MG1655] dbj|BAE76659.1| heme lyase, CcmF subunit [Escherichia coli str. K12 substr. W3110] gb|ACB03358.1| heme lyase, CcmF subunit [Escherichia coli str. K-12 substr. DH10B] gb|ACB15816.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli SMS-3-5] gb|EDX41077.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 101-1] dbj|BAG77988.1| cytochrome c-type biogenesis protein [Escherichia coli SE11] emb|CAU98319.1| heme lyase, CcmF subunit [Escherichia coli 55989] gb|ACR63411.1| heme lyase, CcmF subunit [Escherichia coli BW2952] emb|CAQ32599.1| cytochrome c-type biogenesis protein, subunit of CcmEFGH holocytochrome c synthetase [Escherichia coli BL21(DE3)] gb|ACT28526.1| cytochrome c assembly protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gb|ACT39780.1| heme lyase, CcmF subunit [Escherichia coli B str. REL606] gb|ACT43946.1| heme lyase, CcmF subunit [Escherichia coli BL21(DE3)] gb|ACX39133.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DH1] gb|EFJ66154.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 175-1] gb|EFJ97319.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 115-1] gb|EFK14227.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 116-1] gb|EFK25178.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 187-1] gb|EFK49322.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 107-1] emb|CBJ01834.1| cytochrome C-type biogenesis protein [Escherichia coli ETEC H10407] gb|ADT75830.1| heme lyase, CcmF subunit [Escherichia coli W] dbj|BAJ43987.1| heme lyase, CcmF subunit [Escherichia coli DH1] gb|EFZ57514.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli LT-68] gb|ADX50185.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KO11FL] gb|EGB33095.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E1520] gb|EGB36924.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E482] gb|EGB57195.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H489] gb|EGB68179.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TA007] gb|EGB90167.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 117-3] gb|EGC08357.1| cytochrome c-type biogenesis protein CcmF [Escherichia fergusonii B253] gb|EGC11814.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E1167] gb|EGI11843.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H736] gb|AEJ57361.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli UMNF18] gb|EGR63514.1| heme lyase, CcmF subunit [Escherichia coli O104:H4 str. 01-09591] gb|EGR73906.1| heme lyase, CcmF subunit [Escherichia coli O104:H4 str. LB226692] gb|EGT66383.1| hypothetical protein C22711_0410 [Escherichia coli O104:H4 str. C227-11] gb|EGU25067.1| heme lyase, CcmF subunit [Escherichia coli XH140A] gb|EGU97709.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 79-10] gb|EGV49128.1| heme lyase, CcmF subunit [Escherichia coli XH001] gb|EGW90240.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_DG131-3] gb|EGW94017.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_EH250] gb|EGX07452.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli G58-1] gb|EGX17232.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_S1191] gb|EHF22484.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. C236-11] gb|EHF27753.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. C227-11] gb|EHF29812.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 04-8351] gb|EHF33634.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 09-7901] gb|EHF40347.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-3677] gb|EHF49684.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4404] gb|EHF53234.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4522] gb|EHF55356.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4632 C1] gb|EHF57599.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4623] gb|EHF58953.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4632 C2] gb|EHF72851.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4632 C5] gb|EHF75834.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4632 C3] gb|EHF77735.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-4632 C4] dbj|BAL38987.1| heme lyase, CcmF subunit [Escherichia coli str. K-12 substr. MDS42] gb|EHV55590.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC6B] gb|EHV56779.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC6A] gb|EHV60287.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC6C] gb|EHV74026.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC6E] gb|EHV95691.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC7B] gb|EHX47596.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC13A] gb|EHX60909.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC13B] gb|EHX61474.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC13C] gb|EHX63646.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC13D] gb|EHX73384.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC13E] gb|EHX77577.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC14A] gb|AFH17303.1| heme lyase, CcmF subunit [Escherichia coli KO11FL] gb|AFH12005.1| heme lyase, CcmF subunit [Escherichia coli W] gb|EIE37953.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli J53] gb|EIE57261.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli AI27] gb|EIF20226.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O32:H37 str. P4] gb|EIF83617.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli M919] gb|EIG43381.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H730] gb|EIG70019.1| cytochrome c-type biogenesis protein CcmF [Escherichia sp. 4_1_40B] gb|EIH25280.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 1.2264] gb|EII09247.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 5.0959] gb|EII48730.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 2.3916] gb|EII67443.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 2.4168] gb|EII76700.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3.2303] gb|EIJ04161.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B41] gb|EIL57783.1| heme lyase, CcmF subunit [Escherichia coli 541-15] gb|EIL69587.1| heme lyase, CcmF subunit [Escherichia coli 75] gb|EJZ47926.1| cytochrome c-type biogenesis protein CcmF [Escherichia sp. 1_1_43] gb|AFS56383.1| heme lyase, CcmF subunit [Escherichia coli O104:H4 str. 2009EL-2050] gb|AFS73598.1| heme lyase, CcmF subunit [Escherichia coli O104:H4 str. 2011C-3493] gb|AFS87169.1| heme lyase, CcmF subunit [Escherichia coli O104:H4 str. 2009EL-2071] gb|EKI26747.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW00353] gb|EKI38237.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3006] gb|EKJ80098.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli AD30] gb|EKK44321.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 8.0566] gb|EKK45298.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 8.0569] gb|EKY82972.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02033-1] gb|EKY85699.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02092] gb|EKY97822.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02030] gb|EKY99243.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02093] gb|EKY99512.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02281] gb|EKZ02597.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02318] gb|EKZ13368.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-02913] gb|EKZ15815.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-03439] gb|EKZ17371.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-03943] gb|EKZ29502.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. 11-04080] gb|EKZ41470.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-4984] gb|EKZ43224.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-9990] gb|EKZ46939.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-9450] gb|EKZ50605.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-4987] gb|EKZ57161.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-4986] gb|EKZ65442.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-5604] gb|EKZ68100.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-4988] gb|EKZ72282.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-5603] gb|EKZ74464.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-6006] gb|EKZ84010.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec12-0465] gb|EKZ87699.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec11-9941] gb|EKZ93593.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli O104:H4 str. Ec12-0466] gb|ELC08030.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE10] gb|ELC59397.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE44] gb|ELD29945.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE212] gb|ELD70022.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE234] gb|ELD99041.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE51] gb|ELE63650.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE77] gb|ELE71515.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE81] gb|ELF08637.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE119] gb|ELF19491.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE156] gb|ELF24111.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE161] gb|ELF37605.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE171] gb|ELF73481.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE42] gb|ELF97960.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE48] gb|ELG41224.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE91] gb|ELG61518.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE135] gb|ELH33568.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE184] gb|ELH48329.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE197] gb|ELI37884.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE120] gb|ELI79221.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE138] gb|ELJ57643.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE232] gb|ELJ79872.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE90] emb|CCP99209.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli O10:K5(L):H4 str. ATCC 23506] emb|CCQ03414.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli O5:K4(L):H4 str. ATCC 23502] (647 aa) Score: 184 bits (468), Expect: 8.72485e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_11927824.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_7v] ref|ZP_11966330.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 1.2741] ref|ZP_16848001.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli M863] gb|EGB63049.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli M863] gb|EGE64123.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_7v] gb|EIG81765.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 1.2741] (647 aa) Score: 184 bits (468), Expect: 8.87167e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_11672079.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli WV_060327] gb|EFW70693.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli WV_060327] (647 aa) Score: 184 bits (468), Expect: 8.87167e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_11648465.1| Cytochrome c heme lyase subunit CcmF [Shigella boydii ATCC 9905] gb|EFW53794.1| Cytochrome c heme lyase subunit CcmF [Shigella boydii ATCC 9905] (647 aa) Score: 184 bits (468), Expect: 8.87167e-44 Length: 587, Idn/Pos/Gap = 152/263/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L+ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLAAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_16734137.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas syringae pv. aceris str. M302273] gb|EGH72577.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas syringae pv. aceris str. M302273] (657 aa) Score: 184 bits (468), Expect: 8.946e-44 Length: 576, Idn/Pos/Gap = 150/256/60 (26%/44%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTF-INYFINKLTL 123 ++ DFS+ +V + S+ P YK +W +EGSL L + + +TF ++ F +L Sbjct: 62 MVDDFSVAYVAQNSNTALPWYYKFSAVWGAHEGSLLL--WALILGGWTFAVSVFSRQLPQ 119 Query: 124 IVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPL 183 ++ + I ++ FLS L+L F G +LN LLQDI +++HPP+ Sbjct: 120 VMLARVLAVMGMI--SLGFLSF-LILTSNPFARLLPQMPANGRDLNPLLQDIGLIVHPPM 176 Query: 184 IYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ F+ ++ + + R L+ W I LGS WAY ELG Sbjct: 177 LYMGYVGFSVAFAF-AIAALLGGRLDAAWARWSRPWTLVAWAFLGIGISLGSWWAYYELG 235 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L +A + + ++G LVR Sbjct: 236 WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVR 295 Query: 302 SGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFDLNNHYNF 355 SG+L SVH F + P + L F LV + F + ++K + F + Sbjct: 296 SGVLTSVHAFASDPARGVFILMFLLVVVGGSLTLFAIRAPVVKSHVGFGL---WSRETLL 352 Query: 356 VYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLI 415 + LLV+ + LL LY P +I + + +FN + + +G+LL ++ + ++ Sbjct: 353 LGNNLLLVVAASMILLGTLY-PLVIDAMSGAKMSVGPPYFNTLFVPLMGLLLVVMAVGVL 411 Query: 416 NSWKLIFI-----FLGIIIIGGIRGFPEIFLALYFFIYLLLFTLIL-------------- 456 WK + L +++G + L L F + +L TL+L Sbjct: 412 VRWKDTPLKWLLGMLAPVLVGSVVLAVLAGLLLGDFQWAVLATLMLAAWVLLAGVRDLLD 471 Query: 457 -------------IIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDN 503 + + + + H L ++L + E L + G++ L Sbjct: 472 KTRHKGLISGARSLTRSYWGMQLAHLGIVVCALGVVLSSQNSAERDLRMAPGESTELG-G 530 Query: 504 FIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQ-NVLFSEKRFYLYQSLINTKSI 562 + +F H N+ S G + +Q L EKRFY Q + T++ Sbjct: 531 YTFVFEGARHYEGPNFTSDRGTVRV-------LRNGVQLTELHPEKRFYTVQQSMMTEAG 583 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFW 598 I D+Y+ LG+ + W R+ PF+ W W Sbjct: 584 IDAGFSRDLYVALGEPLGDGAWAVRVHVKPFVRWIW 619
ref|ZP_12680110.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli W26] gb|EID67147.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli W26] (647 aa) Score: 184 bits (468), Expect: 9.02096e-44 Length: 588, Idn/Pos/Gap = 154/264/77 (26%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VVRVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYILRFLN---LIGWFIASFSILLGSR 234 + HPPL+Y+ Y +S+ F+ F I + C RF L W + I+LGS Sbjct: 171 IFHPPLLYMGYVGFSVAFA--FAIASLLCGRLDSTYARFTRPWTLAAWIFLTLGIVLGSA 228 Query: 235 WAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVII 294 WAY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + + Sbjct: 229 WAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCL 288 Query: 295 IGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNH 352 +G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 289 LGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSR 348 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFI 403 + + +L++ L +L P + K ++ FFN + LLL + Sbjct: 349 ESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGV 408 Query: 404 GILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALY 444 G L+ L+II I++ L + + + ++G LA+ Sbjct: 409 GPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMA 459 Query: 445 FFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNF 504 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 CWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGD 519 Query: 505 II-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 SVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSM 573 Query: 558 NTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 MTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_07187966.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 196-1] ref|ZP_13704377.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC6D] ref|ZP_18664778.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW15901] gb|EFI88690.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 196-1] gb|EHV70185.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC6D] gb|EKI18701.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW15901] (646 aa) Score: 184 bits (468), Expect: 9.02096e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 61 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 120 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 121 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 169 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 170 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 228 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 229 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 288 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 289 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 348 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 349 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 408 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 409 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 459 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 519 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 573 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 619
ref|ZP_03001599.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 53638] gb|EDU64631.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 53638] (647 aa) Score: 184 bits (468), Expect: 9.17276e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_14747577.1| c-type cytochrome biogenesis protein CcmF, partial [Rhizobium sp. CF080] gb|EJL50655.1| c-type cytochrome biogenesis protein CcmF, partial [Rhizobium sp. CF080] (648 aa) Score: 184 bits (468), Expect: 9.40526e-44 Length: 589, Idn/Pos/Gap = 160/261/68 (27%/44%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDFS+ V E S P +YK +W N+EGS+ L + L + + + F L Sbjct: 62 VVSDFSVANVWENSHSLMPLIYKYSGVWGNHEGSMLL-WLLILVFFSALVAVFGRNLPDT 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFTVLEGNELNFLLQDINILIHPP 182 ++ +I + +FL LL FLR D EG +LN +LQD + +HPP Sbjct: 121 LRANVLAVQAWI--STAFLFFILLTSNPFLRLDP----APAEGQDLNPVLQDFGLAVHPP 174 Query: 183 LIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTEL 240 L+Y+ Y +S+ FS + LI + + + +R L W + I +GS WAY EL Sbjct: 175 LLYLGYVGFSVCFSFAVAALI-EGRIDAAWARWVRPWTLAAWTFLTAGIAMGSYWAYYEL 233 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL ALLHS L+ K +++ ++ L + + + ++G LV Sbjct: 234 GWGGWWFWDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAIMTFSLSLLGTFLV 293 Query: 301 RSGLLQSVHTFVNSPN---FLIIFLYFFLVFIFIL---IVILLKKYTYFTSIFDLNNHYN 354 RSG+L SVH+F P F++ L F+ F+L +LK F I + Sbjct: 294 RSGVLTSVHSFATDPTRGIFILCILGIFIGGAFVLFAWRAPMLKAGGIFAPI---SREGA 350 Query: 355 FVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 V +L + L LY P +++ + FFN L + LL + Sbjct: 351 LVLNNLILTVATATVLTGTLY-PLILETLTGEKISVGAPFFNMTFGLLMLPLLVAVPFGP 409 Query: 415 INSWK---------LIFIFLGIIIIGGI------RGFP--EIF-LALYFFIYLLLFT--- 453 + +WK +++F G+ + G+ G P IF L L F+ + F Sbjct: 410 VLAWKRGDLLGALQRLYVFAGLALAAGLIFFYIQNGGPVLAIFGLVLGFWGMIGAFADLW 469 Query: 454 ----------------LILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 L + + F + HF +L + T +G E ++ G + Sbjct: 470 YRANFAKVGLSVGLKRLTGLPRSVFGTAIAHFGLGVTVLGIFAATTFGTETVVEMKQGAS 529 Query: 498 LLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV-LFSEKRFYLYQSL 556 + + + + + L NY G+F ++ +Q ++S KR Y + + Sbjct: 530 VDVG-GYSLTYDGLRDAVGPNYTEQRGHFAVS-------RGGVQVADVWSSKRLYTARRM 581 Query: 557 INTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 T++ I T +S +Y+ LGD G RI + PFI W G + ++ Sbjct: 582 PTTEAGILTFGLSQLYVSLGDAMDSGGMVVRIWWKPFILCIWGGALVMM 630
ref|ZP_20087078.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE146] gb|ELG88074.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE146] (647 aa) Score: 184 bits (468), Expect: 9.48407e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_11229958.1| cytochrome C biogenesis protein ccmF [Pseudoalteromonas flavipulchra JG1] (652 aa) Score: 184 bits (468), Expect: 9.56353e-44 Length: 594, Idn/Pos/Gap = 152/267/78 (25%/44%/13%) Query: 63 ILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINK-- 120 I L+ DF++ +V SS P YK+ + W +EG++ L +Q + +T + ++K Sbjct: 60 ITLMDDFTVAYVAHHSSSTLPWYYKITSTWGGHEGAILLWLVMQSM--WTMLVAVMSKSL 117 Query: 121 ----LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDIN 176 ++ + F V F+L+ + S F+ + +EG +LN LLQD Sbjct: 118 PWVLRARVLGVLGFLGVGFMLYTLWMSS--------PFERLLPYFPVEGRDLNPLLQDPG 169 Query: 177 ILIHPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRW 235 ++IHPPL+Y+ Y S+ FS + L+ K R + W + I +GS W Sbjct: 170 MIIHPPLLYMGYVGLSVSFSFAIAALLTGKLDNTWAKWSRPWTMAAWGFLTLGITIGSWW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY+ELGWGG+WFWD VE SL+PWL++ ALLHSL + K + + ++ L + + + ++ Sbjct: 230 AYSELGWGGWWFWDPVENASLMPWLVATALLHSLAVTEKRGVFKSWTVLLAITAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNF 355 G +VRSG++ SVH F P+ + + L F+ +++ L Y + Y F Sbjct: 290 GTFIVRSGIIVSVHAFATDPDRGL----YILSFLAVVVGGSLALYALRVAQVYSEGRYQF 345 Query: 356 VYYIFLL------VILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNK---ILLLFIGIL 406 + L +++ L +L P + K ++ FFN+ IL++ IL Sbjct: 346 ISREVALWINNIFLVVATLIVLLGTLLPMIHKELGLGSISIGVPFFNQMFAILIVPFAIL 405 Query: 407 LTLIIIF---------LINSWKLI----------FIFLGIIIIGGIRGFPEIFLALYFFI 447 L L + L+ W ++ +++ ++ P F+A + Sbjct: 406 LGLAPMLRWKQNKMPPLVKKWAVLIAVSLVLTATWLYSSYEVVA-----PLTFVATALAV 460 Query: 448 YLLLFTL------------ILIIKQK-----FSFIVYHFNFFFIMLSLLLITIYGEEFIL 490 ++ + T + I +K ++ ++ H F++ S+ L + Y E + Sbjct: 461 WISVATAADLFNKVTVHPSVAIGFKKLGLSYWAMVLGHIGIAFVIASVTLTSAYSVERSV 520 Query: 491 NFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRF 550 + G+T +LN+ + F + I NY G ++T F N L +EKR Sbjct: 521 SMKPGETAMLNE-YEYRFDGVKEIRGPNYGGHAG--VVTVFKN----GKKVTELHAEKRR 573 Query: 551 YLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 Y T++ I D+Y+ LG+ W RI P++ W WLGG+ + Sbjct: 574 YDVGMQFMTEAAIDDGFFRDLYLALGEPLSAGAWSLRIYHKPYVRWMWLGGLLI 627
ref|ZP_06654134.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B354] ref|ZP_07151638.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 21-1] ref|ZP_08364611.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TA143] ref|ZP_08384468.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H299] ref|ZP_16882700.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E101] ref|ZP_19692623.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE193] ref|ZP_19708377.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE205] ref|ZP_19780649.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE236] ref|ZP_19786064.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE237] ref|ZP_19820845.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE57] ref|ZP_19838999.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE66] ref|ZP_19858476.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE76] ref|ZP_19916180.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE143] ref|ZP_20027493.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE78] ref|ZP_20033389.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE79] ref|ZP_20049732.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE115] ref|ZP_20221753.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE112] ref|ZP_20260042.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE129] ref|ZP_20306465.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE157] ref|ZP_20368110.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE85] gb|EFF13510.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B354] gb|EFK21633.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 21-1] gb|EGI31477.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TA143] gb|EGI50026.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H299] gb|EHN90181.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli E101] gb|ELC96513.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE193] gb|ELD10216.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE205] gb|ELD81780.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE236] gb|ELD86528.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE237] gb|ELE19304.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE57] gb|ELE43094.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE66] gb|ELE59802.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE76] gb|ELF17583.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE143] gb|ELG26134.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE78] gb|ELG30197.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE79] gb|ELG50716.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE115] gb|ELI25030.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE112] gb|ELI59446.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE129] gb|ELJ10117.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE157] gb|ELJ70992.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE85] (647 aa) Score: 184 bits (468), Expect: 9.56353e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_20005496.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE50] ref|ZP_20152016.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE202] ref|ZP_20250580.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE125] gb|ELG02786.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE50] gb|ELH53976.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE202] gb|ELI54098.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE125] (647 aa) Score: 184 bits (468), Expect: 9.64366e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPRLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_18695635.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli N1] gb|EKI52083.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli N1] (647 aa) Score: 184 bits (468), Expect: 9.64366e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_16415329.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 4_1_47FAA] gb|EHP64189.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 4_1_47FAA] (647 aa) Score: 184 bits (468), Expect: 9.64366e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_12475141.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri J1713] gb|EGM61276.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri J1713] (646 aa) Score: 184 bits (468), Expect: 9.64366e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 61 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 120 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 121 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 169 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 170 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 228 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 229 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 288 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 289 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 348 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 349 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 408 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 409 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 459 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 WIAVLATAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 519 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 573 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 619
ref|YP_001344153.1| cytochrome c-type biogenesis protein CcmF [Actinobacillus succinogenes 130Z] gb|ABR74218.1| cytochrome c-type biogenesis protein CcmF [Actinobacillus succinogenes 130Z] (652 aa) Score: 184 bits (468), Expect: 9.72446e-44 Length: 583, Idn/Pos/Gap = 156/270/60 (26%/46%/10%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ +VV S+ P Y+L +W ++EGSL L + ++ T + F +L Sbjct: 63 VNDFSVQYVVNNSNSTLPLHYRLSAVWGSHEGSLLL-WIWMLTLWGTAVALFSKRLPQEA 121 Query: 126 KLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFT--VLEGNELNFLLQDINILIHP 181 V +L + +S+ LL +F F F +G ELN LLQD+ ++ HP Sbjct: 122 -------VARVLGIMGIISIGFLLFVLFTSNPFVRTFPDFPADGRELNPLLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R + W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE SL+PWL ALLHSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENASLMPWLAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYN-----F 355 RSG+L SVH F + P + L + +V I + + K S D + Y+ Sbjct: 295 RSGILVSVHAFASDPTRGLYILAYLVVVIGGSLTLYAIKGNQIRS-RDNSERYSRESMLL 353 Query: 356 VYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLI 415 + IFL+ L + L +L P + K + FF+++ L+ L+ I + Sbjct: 354 LNNIFLMTALSVVLLGTLL--PLVHKQLGLGTISIGAPFFDQMFLIICTPFALLLGIGPL 411 Query: 416 NSWK-----------LIFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILIIK-QKFS 463 W+ +I + L ++ G+ + L + + +++ +I+++ + Sbjct: 412 VKWRRDQFSAIRKPVIISVILMALLGFGLPLLLQNKLTVSAVLGVMMSAIIVLLSLYELH 471 Query: 464 FIVYHFNFFFIMLSLL--------------LITIYGEEFILNFSIGKTLLLN-------D 502 H + F+ LS L +TI+G F N+S+ + + +N + Sbjct: 472 LRATHRSDFWTGLSKLSRSHWGMIAAHLGVAMTIWGVAFSQNYSVERDVRMNVGDSVQIE 531 Query: 503 NFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSI 562 ++ F+ ++ NY G + F N + + LF+EKRFY + T++ Sbjct: 532 DYRFEFKGISEANGPNYAG--GKAQVDIFVN----DKPEATLFAEKRFYTVSKMTMTEAA 585 Query: 563 IYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 I D+Y+ LG+ + W R+ + PF+ W W GG+F++ Sbjct: 586 IDWGFTRDLYVALGESLGDGSWALRLYYKPFVRWIWFGGLFMV 628
ref|ZP_07176395.1| cytochrome c-type biogenesis protein CcmF, partial [Escherichia coli MS 45-1] gb|EFJ92183.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 45-1] (611 aa) Score: 184 bits (468), Expect: 9.80594e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 26 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 85 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 86 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 134 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 135 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 193 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 194 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 253 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 254 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 313 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 314 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 373 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 374 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 424 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 425 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 484 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 485 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 538 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 539 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 584
ref|ZP_16878276.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B093] gb|EHN95520.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli B093] (647 aa) Score: 184 bits (468), Expect: 9.97095e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_07195929.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 185-1] gb|EFJ55631.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 185-1] (647 aa) Score: 184 bits (468), Expect: 9.97095e-44 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_19205985.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas sp. M1] gb|EKX01658.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas sp. M1] (658 aa) Score: 184 bits (468), Expect: 1.00545e-43 Length: 584, Idn/Pos/Gap = 151/265/76 (25%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFINYFI 118 L DFS+ +V S+ P YK +W +EGSL L G+ I+ + + Sbjct: 62 LHDDFSVAYVASNSNSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSIFSRELPEPM 121 Query: 119 NKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINIL 178 L ++ + + F+LF L++ F +GN+LN LLQD ++ Sbjct: 122 --LARVLAVMGMISTGFLLF--------LIITSNPFSRLLPQAPADGNDLNPLLQDPGLI 171 Query: 179 IHPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWA 236 IHPP++Y+ Y +S+ F+ ++ + + R L+ W I+LGS WA Sbjct: 172 IHPPMLYMGYVGFSVAFAF-AIAALLGGRLDAAWARWSRPWTLVAWTFLGIGIVLGSWWA 230 Query: 237 YTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIG 296 Y ELGWGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L +A + + ++G Sbjct: 231 YYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLG 290 Query: 297 IILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFDLN 350 LVRSG+L SVH F + P + L F LV + F L ++K F L Sbjct: 291 TFLVRSGVLTSVHAFASDPERGVFILAFLLVVVGGSLTLFALRAPVVKSQVGFA----LW 346 Query: 351 NHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI-LLLFIGILLTL 409 + + +++++ +L +P ++ + L +FN + + L G++L L Sbjct: 347 SRETLLLLNNVVLVVTAAMILLGTLYPLVLDAISGAKLSVGPPYFNALFVPLMTGMMLAL 406 Query: 410 IIIFLINSWK----------LIFIFLGIIIIGGIRGFPEIFLALYF---FIYLLLFTLIL 456 + L+ WK L + +G +++GG+ F ++ L++ ++LL F +IL Sbjct: 407 TVGVLVR-WKDTPTQWLLRMLTPVLIGAVVLGGVATF--LYGDLHWPVLAVFLLAFWVIL 463 Query: 457 --------IIKQK-------------FSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIG 495 ++ K + V H + ++L + + + L + G Sbjct: 464 GGVRDFLDKVRHKGLVAGAASLNRSYWGMQVAHLGIAVCAIGIVLTSQFSAQRDLRMAPG 523 Query: 496 KTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 +++ L + F H N+ S G +T + + VL EKR Y Q Sbjct: 524 ESVELG-GYQFAFEGTRHFEGPNFTSDKGTIRVTRKGSEVA------VLHPEKRLYSVQR 576 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFW 598 + T++ I+ +L D+Y+ LG+ +NG W R+ PF+ + W Sbjct: 577 SMMTEAGIHGSLTRDLYVALGE-PLDNGAWAVRLHIKPFVRFIW 619
ref|NP_708092.1| cytochrome c-type biogenesis protein [Shigella flexneri 2a str. 301] ref|NP_837807.1| cytochrome c-type biogenesis protein [Shigella flexneri 2a str. 2457T] ref|YP_689692.1| cytochrome c-type biogenesis protein [Shigella flexneri 5 str. 8401] ref|YP_005727924.1| Cytochrome c-type biogenesis protein [Shigella flexneri 2002017] ref|ZP_11529340.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 2a str. 2457T] ref|ZP_12352266.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-218] ref|ZP_12372588.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-304] ref|ZP_12383051.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 2747-71] ref|ZP_12387607.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 4343-70] ref|ZP_12392595.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 2930-71] ref|ZP_12880844.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 6603-63] ref|ZP_14822904.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 2850-71] ref|ZP_14833656.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-1770] ref|ZP_14842459.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-404] ref|ZP_18263212.1| cytochrome c-type biogenesis protein [Shigella flexneri 5a str. M90T] gb|AAN43799.1| cytochrome c-type biogenesis protein [Shigella flexneri 2a str. 301] gb|AAP17616.1| cytochrome c-type biogenesis protein [Shigella flexneri 2a str. 2457T] gb|ABF04387.1| cytochrome c-type biogenesis protein [Shigella flexneri 5 str. 8401] gb|ADA74631.1| Cytochrome c-type biogenesis protein [Shigella flexneri 2002017] gb|EFS15706.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 2a str. 2457T] gb|EGJ85203.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 4343-70] gb|EGJ86825.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 2747-71] gb|EGJ96220.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 2930-71] gb|EGK21581.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-218] gb|EGK35970.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-304] gb|EID62648.1| cytochrome c-type biogenesis protein [Shigella flexneri 5a str. M90T] gb|EIQ07609.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 2850-71] gb|EIQ10114.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-1770] gb|EIQ30354.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-404] gb|EJL13722.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri 6603-63] (647 aa) Score: 184 bits (468), Expect: 1.01387e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLATAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_006096744.1| cytochrome C-type biogenesis protein [Escherichia coli 042] emb|CBG35270.1| cytochrome C-type biogenesis protein [Escherichia coli 042] (647 aa) Score: 184 bits (468), Expect: 1.01387e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_18690955.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 07798] ref|ZP_19624879.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE15] ref|ZP_19630637.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE16] ref|ZP_19751722.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE224] ref|ZP_19791008.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE47] ref|ZP_19848167.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE72] ref|ZP_19882557.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE86] ref|ZP_19892054.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE93] ref|ZP_19934781.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE169] ref|ZP_19980905.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE43] ref|ZP_20114322.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE194] ref|ZP_20136825.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE183] ref|ZP_20174678.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE215] ref|ZP_20226795.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE113] ref|ZP_20287828.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE145] ref|ZP_20329930.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE168] ref|ZP_20373077.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE88] gb|EKI37928.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 07798] gb|ELC27996.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE16] gb|ELC28909.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE15] gb|ELD52389.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE224] gb|ELD90261.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE47] gb|ELE49470.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE72] gb|ELE80691.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE86] gb|ELE90206.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE93] gb|ELF37763.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE169] gb|ELF81791.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE43] gb|ELH14367.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE194] gb|ELH43475.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE183] gb|ELH79208.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE215] gb|ELI25282.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE113] gb|ELI88260.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE145] gb|ELJ28294.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE168] gb|ELJ70275.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE88] (647 aa) Score: 184 bits (468), Expect: 1.02237e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_09969892.1| cytochrome c-type biogenesis protein CcmF [Serratia sp. M24T3] gb|EIC84863.1| cytochrome c-type biogenesis protein CcmF [Serratia sp. M24T3] (657 aa) Score: 184 bits (468), Expect: 1.03957e-43 Length: 599, Idn/Pos/Gap = 158/268/92 (26%/44%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DFS+ +V S+ + P Y++ W +EGSL L + L + T + F ++ Sbjct: 62 VVNDFSVAYVANNSNTHLPVYYRMAATWGAHEGSLLL-WVLLLSCWTTAVALFSRRMPND 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLL-IFLRFDFFF----NFTVLEGNELNFLLQDINILI 179 V +L + ++ LL I L + F NF + +G++LN +LQDI ++ Sbjct: 121 A-------VARVLAVMGLITTGFLLFILLTSNPFLRTLPNFPI-DGSDLNPVLQDIGLIF 172 Query: 180 HPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 HPP++Y+ Y +S+ F+ + L+ + R W + I+LGS WAY Sbjct: 173 HPPILYMGYVGFSVAFAFAIASLMAGRLDTAWARWSRPWTQAAWVFLTVGIVLGSAWAYY 232 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G Sbjct: 233 ELGWGGWWFWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITCFSLCLLGTF 292 Query: 299 LVRSGLLQSVHTFVNSP-NFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVY 357 LVRSG+L SVH+F + P + I Y +V L++ +K S+ + H + Sbjct: 293 LVRSGVLVSVHSFASDPARGMFILAYLVIVIGSSLLLYAIKG----NSVRAPSRHEPYSR 348 Query: 358 YIFL-----LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFI 403 FL L++ L +L P + K ++ FFN + LLL I Sbjct: 349 ESFLLGNNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMAPLALLLGI 408 Query: 404 GILLTLIIIFLINSWKLIFIFL-------------------GIIIIGGIRGFPEIFLALY 444 G L+ W+ + I L G+ ++G + Sbjct: 409 GPLVRWRRDEPSKLWRRLGIALVVTLLLSILLPWLLQDKIVGMTVVG-----------ML 457 Query: 445 FFIYLLLFTLILIIKQ---KFSFI-------VYHFNFFFIMLSLLLITIYGEEFILNFSI 494 ++++L TL+ + ++ + +F+ H+ L + +T+ G F N+S+ Sbjct: 458 MSVWVILLTLMELHERAIHRHTFLRGLTHLSRSHWGMVLGHLG-VAVTVIGISFSQNYSV 516 Query: 495 GKTLLLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQ--NVLF 545 + + + + FRDL I NY N +T N + VL Sbjct: 517 ERDVRMKAGDTVDIQGYHFEFRDLTDITGPNYTGGEANIDVT--------RNGKFVTVLH 568 Query: 546 SEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 +EKR+Y + T++ I NL D+Y LG+ + W R+ + PF+ W WLGGIF+ Sbjct: 569 AEKRYYSVSHSMMTEAAIDGNLARDLYAALGEELDDGSWAVRLYYKPFVRWIWLGGIFM 627
ref|ZP_07213217.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 124-1] gb|EFK65363.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 124-1] (593 aa) Score: 184 bits (468), Expect: 1.03957e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 8 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 67 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 68 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 116 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 117 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 175 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 176 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 235 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 236 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 295 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 296 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 355 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 356 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 406 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 407 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 466 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 467 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMM 520 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 521 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 566
ref|YP_002413244.1| heme lyase, CcmF subunit [Escherichia coli UMN026] ref|ZP_06649654.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli FVEC1412] ref|ZP_06990943.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli FVEC1302] ref|ZP_07116137.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 198-1] ref|ZP_14450121.1| heme lyase, CcmF subunit [Escherichia coli 576-1] ref|ZP_19597407.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE2] ref|ZP_19645238.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE26] ref|ZP_19669251.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE181] ref|ZP_19703365.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE204] ref|ZP_19718422.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE208] ref|ZP_19731745.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE213] ref|ZP_19755453.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE228] ref|ZP_19775288.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE235] ref|ZP_19867907.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE80] ref|ZP_19877529.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE83] ref|ZP_19902171.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE116] ref|ZP_20009558.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE54] ref|ZP_20073365.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE140] ref|ZP_20101250.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE158] ref|ZP_20119071.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE190] ref|ZP_20207484.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE105] ref|ZP_20240983.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE122] ref|ZP_20255298.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE128] ref|ZP_20344075.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE177] ref|ZP_20363450.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE82] ref|ZP_20387588.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE95] emb|CAR13716.1| heme lyase, CcmF subunit [Escherichia coli UMN026] gb|EFF00897.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli FVEC1412] gb|EFI20300.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli FVEC1302] gb|EFJ74403.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 198-1] gb|EIL75344.1| heme lyase, CcmF subunit [Escherichia coli 576-1] gb|ELB98849.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE2] gb|ELC45630.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE26] gb|ELC74464.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE181] gb|ELD05375.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE204] gb|ELD20612.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE208] gb|ELD33833.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE213] gb|ELD60563.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE228] gb|ELD77604.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE235] gb|ELE70375.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE80] gb|ELE81440.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE83] gb|ELE99602.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE116] gb|ELG06084.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE54] gb|ELG72767.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE140] gb|ELG98661.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE158] gb|ELH21007.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE190] gb|ELI07833.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE105] gb|ELI43129.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE122] gb|ELI56122.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE128] gb|ELJ43889.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE177] gb|ELJ66334.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE82] gb|ELJ85356.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE95] (647 aa) Score: 184 bits (467), Expect: 1.05707e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_12237981.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_C165-02] gb|EGW68783.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_C165-02] (646 aa) Score: 184 bits (467), Expect: 1.06592e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 61 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 120 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 121 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 169 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 170 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 228 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 229 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 288 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 289 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 348 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 349 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 408 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 409 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 459 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 460 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 519 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 520 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 573 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 574 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 619
ref|ZP_19967763.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE45] ref|ZP_19994510.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE46] gb|ELF67144.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE45] gb|ELF95960.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE46] (647 aa) Score: 184 bits (467), Expect: 1.08386e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_11489299.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3431] gb|EFU96088.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3431] (647 aa) Score: 184 bits (467), Expect: 1.09294e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDQGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_002408294.1| heme lyase CcmF [Escherichia coli IAI39] ref|YP_006144619.1| heme lyase, CcmF subunit [Escherichia coli O7:K1 str. CE10] emb|CAR18460.1| heme lyase, CcmF subunit [Escherichia coli IAI39] gb|AEQ13334.1| heme lyase, CcmF subunit [Escherichia coli O7:K1 str. CE10] (647 aa) Score: 184 bits (467), Expect: 1.1021e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIEVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_09868983.1| c-type cytochrome biogenesis protein CcmF [Thiorhodovibrio sp. 970] gb|EIC19907.1| c-type cytochrome biogenesis protein CcmF [Thiorhodovibrio sp. 970] (666 aa) Score: 184 bits (467), Expect: 1.13003e-43 Length: 599, Idn/Pos/Gap = 154/267/85 (25%/44%/14%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFINYFI 118 ++SDFS+ +V S+ P++YK+ +W +EGSL L G+ IY N + Sbjct: 62 VVSDFSVTYVATNSNSLLPTIYKVSAVWGAHEGSLLLWVLMMAGWGAAVAIYSK--NLPL 119 Query: 119 NKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINIL 178 + ++ + + F+LF LL FD F EG +LN LLQD + Sbjct: 120 AMIARVISVQGMVTIGFLLFT--------LLTSNPFDRLFPVPP-EGRDLNPLLQDFGLA 170 Query: 179 IHPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWA 236 IHPP++Y+ Y +S+ F+ +I K + R + W + I LGS WA Sbjct: 171 IHPPMLYMGYVGFSVAFAF-AIAALIGGKLDAAWARWSRPWTTVAWIFLTIGIALGSWWA 229 Query: 237 YTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIG 296 Y ELGWGG+WFWD VE SL+PWL+ AL+HSL + K + ++ L ++ + + ++G Sbjct: 230 YYELGWGGWWFWDPVENASLMPWLIGTALMHSLAVTEKRAAFKSWTVLLAISAFSLSLLG 289 Query: 297 IILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFV 356 LVRSG+L SVH F P F L+F+ ++I L Y + H++ + Sbjct: 290 TFLVRSGVLTSVHAFATDPTRGA----FILLFLCVVIGGSLALYAWRAPSVSSGGHFDLL 345 Query: 357 YYIFLLVILYFLY------LLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLI 410 L++ L+ +LF P + + + + F +FNK+ + L L+ Sbjct: 346 SRESSLLMNNLLFSAFTILVLFGTLAPLIYEAFGWGKISVGFPWFNKMFVALAPFLALLL 405 Query: 411 IIFLINSWK-------LIFIFLGIIIIGGIRGF---PEIFLALYFFIYL-------LLFT 453 I + WK L ++ +++ G+ GF F A + ++ + +LF+ Sbjct: 406 GIGPLVRWKHDAALRLLSKLWPALVLTIGV-GFWVAKAEFAASHLWVTIGISLAAWILFS 464 Query: 454 LILIIKQK--------------------------FSFIVYHFNFFFIMLSLLLITIYGEE 487 ++ + ++ + ++ H +++ + +++ + E Sbjct: 465 HLMALFERLKNRPDGFVAGIKSIGTDLRGSGRGFYGMLIAHLGVAVLIIGITMVSTFDME 524 Query: 488 FILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LF 545 + S G + L + F NY + G+F M Y + + LF Sbjct: 525 HDVRMSPGDSHELA-GYRFEFLGAEPKDGPNYNADRGHF--------MVYRGDKTIAELF 575 Query: 546 SEKRFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 EKR Y+ + T++ I LM D+Y+ LG+ W R+ + P++ W WLG IF+ Sbjct: 576 PEKRAYMGGGMPMTEAAIDAGLMRDIYVSLGEHVGGGDWALRLYYKPYVRWIWLGAIFM 634
ref|ZP_09460505.1| heme lyase, CcmF subunit [Escherichia sp. TW09308] (647 aa) Score: 184 bits (467), Expect: 1.1395e-43 Length: 590, Idn/Pos/Gap = 156/268/81 (26%/45%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLALSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSL---LLITIYGEEFILNFSIGKTLLLND 502 +I +L I Q+ S ++ M++ L +TI G F N+S+ + + + Sbjct: 461 WIGVL---AIAEAAQRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKS 517 Query: 503 NFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + FRD+ + N+ +T P + VL++EKR+Y Sbjct: 518 GDSVDIHEYRFTFRDVKDVSGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAG 571 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 + T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 572 SMMTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|NP_754619.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli CFT073] ref|YP_541472.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli UTI89] ref|YP_670135.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 536] ref|YP_853304.1| heme lyase, CcmF subunit [Escherichia coli APEC O1] ref|ZP_03031479.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli F11] ref|YP_002329845.1| heme lyase, CcmF subunit [Escherichia coli O127:H6 str. E2348/69] ref|YP_002392026.1| heme lyase, CcmF subunit [Escherichia coli S88] ref|YP_002398570.1| heme lyase CcmF [Escherichia coli ED1a] ref|ZP_04005058.1| cytochrome c family biogenesis protein ccmF [Escherichia coli 83972] ref|ZP_04535150.1| heme lyase [Escherichia sp. 3_2_53FAA] ref|ZP_07175490.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 200-1] ref|ZP_07781711.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 2362-75] ref|ZP_08348942.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli M605] ref|ZP_08359237.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TA206] ref|YP_006101581.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli IHE3034] ref|YP_006110082.1| heme lyase, CcmF subunit [Escherichia coli UM146] ref|YP_006139396.1| Cytochrome c-type biogenesis protein [Escherichia coli NA114] ref|YP_006149710.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli str. 'clone D i2'] ref|YP_006154629.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli str. 'clone D i14'] ref|YP_006106568.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli ABU 83972] ref|ZP_11952890.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli cloneA_i1] ref|ZP_12073794.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW07793] ref|ZP_12312390.1| cytochrome c heme lyase subunit CcmF [Escherichia coli AA86] ref|ZP_12404531.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC2B] ref|ZP_13545466.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1A] ref|ZP_13550272.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1B] ref|ZP_13555870.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1C] ref|ZP_13566429.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1E] ref|ZP_13571850.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC2A] ref|ZP_13576827.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC2C] ref|ZP_13582722.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC2D] ref|ZP_13587379.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC2E] ref|ZP_14228633.1| heme lyase CcmF [Escherichia coli SCI-07] ref|ZP_14463487.1| heme lyase, CcmF subunit [Escherichia coli HM605] ref|ZP_16441001.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 110-3] ref|ZP_16454955.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 60-1] ref|ZP_16803386.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H252] ref|ZP_16809443.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H263] ref|ZP_16885723.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H397] ref|ZP_19601766.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE4] ref|ZP_19606440.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE5] ref|ZP_19640804.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE25] ref|ZP_19649960.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE28] ref|ZP_19655072.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE39] ref|ZP_19665088.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE178] ref|ZP_19674913.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE187] ref|ZP_19679310.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE188] ref|ZP_19684032.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE189] ref|ZP_19689105.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE191] ref|ZP_19699488.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE201] ref|ZP_19713609.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE206] ref|ZP_19738101.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE214] ref|ZP_19746767.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE220] ref|ZP_19761522.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE230] ref|ZP_19796115.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE49] ref|ZP_19805788.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE53] ref|ZP_19810755.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE55] ref|ZP_19824879.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE58] ref|ZP_19829779.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE60] ref|ZP_19834458.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE62] ref|ZP_19844268.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE67] ref|ZP_19887523.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE87] ref|ZP_19946307.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE6] ref|ZP_19949015.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE8] ref|ZP_19958567.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE17] ref|ZP_19963113.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE18] ref|ZP_19976647.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE23] ref|ZP_19989560.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE22] ref|ZP_20013378.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE59] ref|ZP_20018341.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE63] ref|ZP_20022214.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE65] ref|ZP_20036393.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE84] ref|ZP_20055223.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE118] ref|ZP_20061315.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE123] ref|ZP_20077999.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE141] ref|ZP_20163183.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE209] ref|ZP_20179899.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE217] ref|ZP_20184537.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE218] ref|ZP_20189044.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE223] ref|ZP_20194082.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE227] ref|ZP_20196653.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE229] ref|ZP_20202809.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE104] ref|ZP_20212067.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE106] ref|ZP_20245761.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE124] ref|ZP_20264911.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE131] ref|ZP_20274247.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE137] ref|ZP_20297311.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE150] ref|ZP_20301921.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE153] ref|ZP_20311357.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE160] ref|ZP_20325123.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE167] ref|ZP_20334805.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE174] ref|ZP_20339258.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE176] ref|ZP_20348808.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE179] ref|ZP_20353803.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE180] ref|ZP_20392044.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE97] ref|ZP_20396697.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE99] ref|ZP_20401000.1| heme lyase subunit CcmF [Escherichia coli J96] ref|ZP_21022733.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli Nissle 1917] gb|AAN81187.1|AE016763_146 Cytochrome c-type biogenesis protein ccmF [Escherichia coli CFT073] gb|ABE07941.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli UTI89] gb|ABG70234.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 536] gb|ABJ01590.1| heme lyase, CcmF subunit [Escherichia coli APEC O1] gb|EDV69026.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli F11] emb|CAS09888.1| heme lyase, CcmF subunit [Escherichia coli O127:H6 str. E2348/69] emb|CAR03624.1| heme lyase, CcmF subunit [Escherichia coli S88] emb|CAR08842.2| heme lyase, CcmF subunit [Escherichia coli ED1a] gb|EEH87294.1| heme lyase [Escherichia sp. 3_2_53FAA] gb|EEJ46069.1| cytochrome c family biogenesis protein ccmF [Escherichia coli 83972] gb|ADE89406.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli IHE3034] gb|EFJ62107.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 200-1] gb|ADN47037.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli ABU 83972] gb|ADN70570.1| heme lyase, CcmF subunit [Escherichia coli UM146] gb|EFR15598.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 2362-75] gb|EFU45263.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 110-3] gb|EGB47863.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H252] gb|EGB51716.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H263] gb|EGB83217.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 60-1] gb|EGH40537.1| cytochrome c heme lyase subunit CcmF [Escherichia coli AA86] gb|EGI15712.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli M605] gb|EGI28532.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TA206] gb|AEG37122.1| Cytochrome c-type biogenesis protein [Escherichia coli NA114] gb|EHG00426.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli cloneA_i1] gb|AER85086.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli str. 'clone D i2'] gb|AER90005.1| cytochrome c-type biogenesis protein ccmF [Escherichia coli str. 'clone D i14'] gb|EHN99187.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli H397] gb|EHU08739.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1A] gb|EHU08994.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1C] gb|EHU12622.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1B] gb|EHU25002.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC1E] gb|EHU28213.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC2A] gb|EHU38503.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC2B] gb|EHU42435.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC2C] gb|EHU44564.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC2D] gb|EHU54848.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli DEC2E] gb|EIA36063.1| heme lyase CcmF [Escherichia coli SCI-07] gb|EII96133.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli TW07793] gb|EIL71648.1| heme lyase, CcmF subunit [Escherichia coli HM605] gb|ELC00651.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE4] gb|ELC09347.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE5] gb|ELC37205.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE25] gb|ELC50519.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE28] gb|ELC55163.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE39] gb|ELC64254.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE178] gb|ELC71823.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE187] gb|ELC80110.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE188] gb|ELC83554.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE189] gb|ELC90047.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE191] gb|ELC98757.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE201] gb|ELD14201.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE206] gb|ELD36758.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE214] gb|ELD49106.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE220] gb|ELD61173.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE230] gb|ELD96417.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE49] gb|ELE05006.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE53] gb|ELE12037.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE55] gb|ELE23854.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE58] gb|ELE29862.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE60] gb|ELE33132.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE62] gb|ELE39809.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE67] gb|ELE89616.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE87] gb|ELF43102.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE6] gb|ELF49687.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE8] gb|ELF57763.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE17] gb|ELF64997.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE18] gb|ELF74478.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE23] gb|ELF91407.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE22] gb|ELG14633.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE59] gb|ELG15889.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE63] gb|ELG24887.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE65] gb|ELG35061.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE84] gb|ELG54846.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE118] gb|ELG58574.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE123] gb|ELG78121.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE141] gb|ELH68833.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE209] gb|ELH74903.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE217] gb|ELH84098.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE218] gb|ELH86777.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE223] gb|ELH92481.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE227] gb|ELI00703.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE229] gb|ELI07238.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE104] gb|ELI12111.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE106] gb|ELI41932.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE124] gb|ELI66555.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE131] gb|ELI73796.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE137] gb|ELI97126.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE150] gb|ELJ02154.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE153] gb|ELJ12685.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE160] gb|ELJ27068.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE167] gb|ELJ36806.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE174] gb|ELJ40388.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE176] gb|ELJ52926.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE179] gb|ELJ53568.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE180] gb|ELJ93274.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE97] gb|ELJ97533.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE99] gb|ELL42224.1| heme lyase subunit CcmF [Escherichia coli J96] emb|CCQ08710.1| Cytochrome c heme lyase subunit CcmF [Escherichia coli Nissle 1917] (647 aa) Score: 184 bits (467), Expect: 1.1395e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_12279699.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_MHI813] gb|EGX04173.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli STEC_MHI813] (647 aa) Score: 184 bits (467), Expect: 1.14905e-43 Length: 581, Idn/Pos/Gap = 155/266/63 (26%/45%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT------------LIIIFLINSWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLL-L 451 L+ LII F+ S ++ + L + + + LA+ +I +L + Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFI--SMLVLSLLLPWLFESKVVAMTVLGLAMACWIAVLAI 467 Query: 452 FTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFII----- 506 +L I + ++ L L +TI G F N+S+ + + + + Sbjct: 468 AEAVLRISRGTKTTFSYWGMVAAHLG-LAVTIVGIAFSQNYSVERDVRMKSGDSVDIHEY 526 Query: 507 --IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSIIY 564 FRD+ + N+ +T P + VL++EKR+Y + T++ I Sbjct: 527 RFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRYYNTAGSMMTEAAID 580 Query: 565 TNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 581 GGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_16450622.1| cytochrome c-type biogenesis protein CcmF, partial [Escherichia coli MS 16-3] gb|EFU57286.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 16-3] (619 aa) Score: 184 bits (467), Expect: 1.16838e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 34 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 93 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 94 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 142 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 143 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 201 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 202 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 261 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 262 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 321 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 322 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 381 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 382 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 432 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 433 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 492 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 493 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 546 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 547 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 592
ref|ZP_16462385.1| cytochrome c-type biogenesis protein CcmF, partial [Escherichia coli MS 57-2] gb|EGB75782.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 57-2] (624 aa) Score: 184 bits (467), Expect: 1.17817e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 39 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 98 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 99 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 147 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 148 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 206 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 207 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 266 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 267 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 326 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 327 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 386 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 387 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 437 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 438 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 497 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 498 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 551 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 552 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 597
ref|ZP_14289690.1| cytochrome c-type biogenesis protein [Klebsiella pneumoniae subsp. pneumoniae DSM 30104] gb|EJK90591.1| cytochrome c-type biogenesis protein [Klebsiella pneumoniae subsp. pneumoniae DSM 30104] (647 aa) Score: 184 bits (467), Expect: 1.18805e-43 Length: 611, Idn/Pos/Gap = 156/269/82 (25%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DF++ +V E S+ P Y++ W +EGSL L L + F + F ++ Sbjct: 61 VVNDFTVRYVAENSNSALPVWYRVAATWGAHEGSLLLWVLLLSVWTFA-VALFSRRM--- 116 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFT--VLEGNELNFLLQDINILIHPP 182 L V ++ I+F L ++F F ++G +LN LLQDI ++ HPP Sbjct: 117 -PLDAVARVLAVMGMIAF-GFLLFILFTSNPFSRGLPQYPIDGRDLNPLLQDIGMIFHPP 174 Query: 183 LIYISYASYSIIFSIS-FTILIIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELG 241 ++Y+ Y +S+ F+ + ++L + R W + I+LGS WAY ELG Sbjct: 175 ILYMGYVGFSVAFAFAIASLLAGRLDTAWARWSRPWTQAAWMFLTLGIVLGSAWAYYELG 234 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE S +PWL+ ALLHSL + K R ++ L +A + + ++G LVR Sbjct: 235 WGGWWFWDPVENASFMPWLVGTALLHSLAVTEKRGSFRAWTVLLAIAAFSLCLLGTFLVR 294 Query: 302 SGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFL 361 SG+L SVH F + P+ + L +V I +++ K L + +F+ + Sbjct: 295 SGVLVSVHAFASDPSRGLFILVLLIVAIGGSLLLYALKGGRVRVEHTLWSRESFLLGNNI 354 Query: 362 LVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGILL----- 407 L++ L +L P + K ++ FFN + LLL +G L+ Sbjct: 355 LLMAAMLVVLLGTLLPLVHKELGLGSISIGEPFFNTMFTALMAPFALLLGLGPLIRWRRD 414 Query: 408 -------TLIIIFLIN-------SWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLLL-- 451 LII L+ W L + +IG + +AL+ I+ L+ Sbjct: 415 DVARQIKRLIIALLVTLSLSLALPWLLQDRITAMAVIG-------LMMALWVLIFALMEV 467 Query: 452 -----------FTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL 500 L + + ++ ++ H + +T+ G F N+S+ + + + Sbjct: 468 HERATHRHGFWRGLRTLTRSQWGMVLGHVG--------VAVTVIGITFSQNYSVERDVRM 519 Query: 501 NDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 I +F + +I N+ G +T P + L++EKRFY Sbjct: 520 RPGDSIDIYRYHFVFNGVRNIVGPNWTGGEGIIAVTRNGRP------EATLYAEKRFYTA 573 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL----LDSII 609 ++ T++ I L D+Y LG+ + W R+ + PF+ W W GG+ + L ++ Sbjct: 574 SRMMMTEAAISGGLTRDLYAALGEELSDGSWAVRLYYKPFVRWIWYGGVLMALGGLCCML 633 Query: 610 FSLFRCIKNFQ 620 +R K Q Sbjct: 634 DPRYRMRKKLQ 644
ref|ZP_20109906.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE192] ref|ZP_20217030.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE109] gb|ELH08910.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE192] gb|ELI17907.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE109] (647 aa) Score: 184 bits (467), Expect: 1.23866e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIDVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_19812934.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE56] gb|ELE18916.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli KTE56] (647 aa) Score: 184 bits (467), Expect: 1.2595e-43 Length: 584, Idn/Pos/Gap = 152/261/75 (26%/44%/12%) Query: 68 DFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YFINK 120 DF++ +V S+ P Y++ W +EGSL L G+ I+ I + + Sbjct: 65 DFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDIVAR 124 Query: 121 LTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIH 180 + I+ + + FILF + S TL NF + EG +LN LLQD ++ H Sbjct: 125 VLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGLIFH 173 Query: 181 PPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYT 238 PPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS WAY Sbjct: 174 PPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAWAYY 232 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++G Sbjct: 233 ELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLLGTF 292 Query: 299 LVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHYNFV 356 LVRSG+L SVH F + P + L F ++ I +++ + S + L + + + Sbjct: 293 LVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRESLL 352 Query: 357 YYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGILL 407 +L++ L +L P + K ++ FFN + LLL +G L+ Sbjct: 353 LANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVGPLV 412 Query: 408 T-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYFFIY 448 L+II I++ L + + + ++G LA+ +I Sbjct: 413 RWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMACWIA 463 Query: 449 LLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFII-- 506 +L + + + + + L +TI G F N+S+ + + + + Sbjct: 464 VLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDSVDI 523 Query: 507 -----IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKS 561 FRD+ + N+ +T P + VL++EKR+Y + T++ Sbjct: 524 HEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMMTEA 577 Query: 562 IIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 578 AIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_16709844.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas syringae pv. maculicola str. ES4326] gb|EGH60518.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas syringae pv. maculicola str. ES4326] (657 aa) Score: 184 bits (467), Expect: 1.27005e-43 Length: 579, Idn/Pos/Gap = 148/255/66 (25%/44%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTF-INYFINKLTL 123 + DFS+ +V + S+ P YK +W +EGSL L + + +TF ++ F +L Sbjct: 62 MTDDFSVAYVAQNSNTALPWYYKFSAVWGAHEGSLLL--WALILGGWTFAVSVFSRQLPQ 119 Query: 124 IVKLTFFYNVYFILFNISFLSLTLLLIFL----RFDFFFNFTVLEGNELNFLLQDINILI 179 ++ + +L + +SL LL + F G +LN LLQDI +++ Sbjct: 120 VM-------LARVLAVMGMISLGFLLFLILTSNPFARLLPQMPANGRDLNPLLQDIGLIV 172 Query: 180 HPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAY 237 HPP++Y+ Y +S+ F+ ++ + + R L+ W I LGS WAY Sbjct: 173 HPPMLYMGYVGFSVAFAF-AIAALLGGRLDAAWARWSRPWTLVAWAFLGIGISLGSWWAY 231 Query: 238 TELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGI 297 ELGWGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L +A + + ++G Sbjct: 232 YELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGT 291 Query: 298 ILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFDLNN 351 LVRSG+L SVH F + P + L F LV + F + ++K + F + Sbjct: 292 FLVRSGVLTSVHAFASDPARGVFILMFLLVVVGGSLTLFAVRAPVVKSHVGFGL---WSR 348 Query: 352 HYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLII 411 + LLV+ + LL LY P +I + + + +FN + + +G+LL ++ Sbjct: 349 ETLLLGNNLLLVVAASMILLGTLY-PLVIDAISGDKMSVGPPYFNALFVPLMGLLLAVMA 407 Query: 412 IFLINSWKLIFI-----FLGIIIIGGIRGFPEIFLALYFFIYLLLFTLIL---------- 456 + ++ WK + L ++IG L L F + +L T +L Sbjct: 408 VGVLVRWKDTPLKWLLGMLAPVLIGSAVLAVLAALLLGDFQWAVLATFMLAAWVLLAGLR 467 Query: 457 -----------------IIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLL 499 + + + + H L ++L + E L + G++ Sbjct: 468 DLFDKTRHKGLFKGARSLTRSYWGMQLAHLGIVVCALGVVLSSQNSAERDLRMAPGESTE 527 Query: 500 LNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINT 559 L ++ +F H N++S G + P+ L EKR Y Q + T Sbjct: 528 LG-GYVFMFEGAKHYEGPNFISDRGTVRVLHNGAPLTE------LHPEKRLYTVQQSMMT 580 Query: 560 KSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFW 598 ++ I D+Y+ LG+ + W R+ PF+ W W Sbjct: 581 EAGIDAGFSRDLYVALGEPLGDGAWAVRVHVKPFVRWIW 619
ref|ZP_11640111.1| Cytochrome c heme lyase subunit CcmF [Shigella dysenteriae CDC 74-1112] ref|ZP_14878781.1| cytochrome c-type biogenesis protein CcmF [Shigella dysenteriae 225-75] gb|EFW52217.1| Cytochrome c heme lyase subunit CcmF [Shigella dysenteriae CDC 74-1112] gb|EIQ63233.1| cytochrome c-type biogenesis protein CcmF [Shigella dysenteriae 225-75] (647 aa) Score: 184 bits (467), Expect: 1.27005e-43 Length: 595, Idn/Pos/Gap = 157/267/91 (26%/44%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TLL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLL----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILI-----IKQKFSF---IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 +I +L + K FS+ + H L +TI G F N+S+ + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLG--------LAVTIVGIAFSQNYSVERD 512 Query: 498 LLLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRF 550 + + + FRD+ + N+ +T P + VL++EKR+ Sbjct: 513 VRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVVTIGVTREGKP------ETVLYAEKRY 566 Query: 551 YLYQSLINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 Y + T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 567 YNTAGSMMTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_14362938.1| cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus HK386] gb|EIJ74066.1| cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus HK386] (648 aa) Score: 184 bits (467), Expect: 1.29143e-43 Length: 589, Idn/Pos/Gap = 155/267/74 (26%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ +VV S+ P Y+L +W ++EGSL L + + + + + L+ Sbjct: 63 VNDFSVQYVVNNSNTALPIYYRLSAVWGSHEGSLLL--------WIWLLAVWSSAVALLS 114 Query: 126 KLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFT--VLEGNELNFLLQDINILIHP 181 K V +L + +S+ +L +F F F ++G ELN +LQD+ ++ HP Sbjct: 115 KHLPQEAVARVLGIMGIISVGFVLFVLFTSNPFTRTFPDFPVDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 LL+ L + F P + K ++ FF+++ L+ + L+ I Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 415 INSWKL---------IFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILII------- 458 + W+ + I + +++I G P FL + +L +++ +I Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMVIAGF-ALP-YFLQDKITVSSVLGSMMTVIIALLALY 468 Query: 459 --KQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILNFSIGKTLLLN- 501 +Q+ + H FF+ + L +T++G F NFS+ + + + Sbjct: 469 ELQQRAT----HRESFFVGVRKLSRSHWGMMLAHLGVAMTVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFAGVTDANGPNYVGGKAKIDISKDGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_16445654.1| cytochrome c-type biogenesis protein CcmF, partial [Escherichia coli MS 153-1] gb|EFU51496.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli MS 153-1] (617 aa) Score: 184 bits (467), Expect: 1.29143e-43 Length: 587, Idn/Pos/Gap = 152/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 32 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 91 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 92 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 140 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 141 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 199 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 200 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 259 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 260 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 319 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 320 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 379 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 380 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 430 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 431 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 490 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + VL++EKR+Y + Sbjct: 491 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 544 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 545 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 590
ref|ZP_04464008.1| cytochrome C-type biogenesis protein [Haemophilus influenzae 6P18H1] gb|EEP48549.1| cytochrome C-type biogenesis protein [Haemophilus influenzae 6P18H1] (648 aa) Score: 184 bits (467), Expect: 1.29143e-43 Length: 589, Idn/Pos/Gap = 156/267/74 (26%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ ++V S+ P Y+L +W ++EGSL L + + + + + L+ Sbjct: 63 VNDFSVQYIVNNSNTTLPIYYRLSAVWGSHEGSLLL--------WIWLLAVWSSAVALLS 114 Query: 126 KLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFT--VLEGNELNFLLQDINILIHP 181 K V +L + +S+ +L +F F F ++G ELN +LQD+ ++ HP Sbjct: 115 KHLPQEAVARVLGIMGIISVGFVLFVLFTSNPFTRTFPDFPVDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 LL+ L + F P + K ++ FF+++ L+ + L+ I Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 415 INSWKL---------IFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILII------- 458 + W+ + I + I++I G FP FL + +L +++ +I Sbjct: 411 LVKWRRDQFSAIRTPVVISVFIMLIAGF-AFP-YFLQDKITVSSVLGSMMTVIIALLALY 468 Query: 459 --KQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILNFSIGKTLLLN- 501 +Q+ H FF+ + L +T++G F NFS+ + + + Sbjct: 469 ELQQR----AMHREPFFVGVRKLSRSHWGMMLAHLGVAMTVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFSGVTDENGPNYIGGKAQIDISKDGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|YP_032075.1| cytochrome c-type biogenesis protein cycK [Bartonella quintana str. Toulouse] emb|CAF25894.1| Cytochrome c-type biogenesis protein cycK [Bartonella quintana str. Toulouse] (662 aa) Score: 184 bits (467), Expect: 1.31316e-43 Length: 608, Idn/Pos/Gap = 177/277/90 (29%/45%/14%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKL--- 121 ++SDFS+L VVE S +P LYK+ +W N+EGS+ L + L + T + F L Sbjct: 62 MVSDFSVLNVVENSHSEKPMLYKITGVWGNHEGSMLL-WVLSLAFFSTLMALFSQHLPEQ 120 Query: 122 --TLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILI 179 TLI+ + F++F + FLS L I N L+GN+LN LLQDI + I Sbjct: 121 FKTLILVCQSWIISAFLVF-VLFLSNPFLRI--------NPPALQGNDLNPLLQDIALAI 171 Query: 180 HPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYT 238 HPPL+Y+ +S+ FS + L++ + +R L+ W + I++GS WAY Sbjct: 172 HPPLLYLGSVGFSLCFSFAVAALVMGHVDGRWAHWVRPWLLLAWCFLTLGIMVGSYWAYY 231 Query: 239 ELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGII 298 ELGWGG+WFWD VE S +PWL A LHS L+ K ++ +LFL + + + ++G Sbjct: 232 ELGWGGYWFWDPVENASFMPWLSGTAFLHSALVLEKRETLKSWTLFLALLTFSLSLMGTF 291 Query: 299 LVRSGLLQSVHTFVNSP---NFLIIFLYFFLV---FIFILIVILLKKYTYFTSIFDLNNH 352 LVRSGLL SVH+F P ++ L+FF F+F L V +LK F I + Sbjct: 292 LVRSGLLVSVHSFAIDPARGRAILALLFFFTGGAFFLFALRVPVLKAGRLFRPI----SR 347 Query: 353 YNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKIL------------- 399 F+ LL+ +L +P+ I+ + FFN Sbjct: 348 EGFIVLNNLLLTTITATVLIGTLYPYFIEALTGKKISVGAAFFNITCGPLMILLLLLVPF 407 Query: 400 -----------------LLFIGILLTLI--IIFLINSWKLIFIFLGI-----IIIGGI-- 433 L F+ +L + I F S + IF LG+ + +G + Sbjct: 408 GSMMVWKSGDFLAVFERLWFVCVLACVACFITFYATSLRDIFAALGVGLSVFVFLGSLAD 467 Query: 434 ----RGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFI 489 G ++ L++ F ++ L + F + H + ++ + + +E I Sbjct: 468 LWKKSGHHKLALSVRFKRFIGLPWSV------FGAAMAHMGLAVTLFGIVCVATFAQERI 521 Query: 490 LNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYEN---IQNVLFS 546 L IG + + I F ++ NY + NF + YEN ++NV+ S Sbjct: 522 LTMHIGDRVTIAGK-TICFDKVHESAGPNYSAMEFNFTV--------YENKHAVRNVIAS 572 Query: 547 EKRFYLYQSLINTK-SIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 KRFY Q++ T+ I L+S +YI G + + G + + P++ WLG I + Sbjct: 573 -KRFYSSQNISTTEVGIQNHGLLSQLYIAPGHID-DQGLVVHLWWKPYVICVWLGAIMMA 630 Query: 606 DSIIFSLF 613 FSLF Sbjct: 631 MGGCFSLF 638
ref|ZP_15950455.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas mendocina DLHK] gb|EJO94096.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas mendocina DLHK] (657 aa) Score: 184 bits (467), Expect: 1.31316e-43 Length: 591, Idn/Pos/Gap = 152/260/78 (25%/43%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFINYFI 118 ++ DFS+ +V S+ P YK +W +EGSL L G+ I+ + + Sbjct: 62 MVDDFSVAYVAHNSNSALPWYYKFSAVWGAHEGSLLLWALILAGWTFAVAIFSRHLPEEM 121 Query: 119 NKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINIL 178 L ++ + ++ F+LF L++ F+ + ++G +LN LLQD ++ Sbjct: 122 --LARVLAVMGMISIGFLLF--------LIVTSNPFERLLPNSPMDGRDLNPLLQDFGLI 171 Query: 179 IHPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWA 236 +HPP++Y+ Y +S+ F+ ++ K + R ++ W I LGS WA Sbjct: 172 VHPPMLYMGYVGFSVAFAF-AIAALLGGKLDAAWARWSRPWTIVAWAFLGIGIALGSWWA 230 Query: 237 YTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIG 296 Y ELGWGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L +A + + ++G Sbjct: 231 YYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLG 290 Query: 297 IILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYF-----TS 345 LVRSG+L SVH F P + L F L+ + F + ++K F + Sbjct: 291 TFLVRSGVLTSVHAFATDPERGVFILAFLLIVVGGSLALFAVRAPVVKSQVGFGLWSRET 350 Query: 346 IFDLNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGI 405 + +NN +LV+ + LL LY P ++ L +FN + L + + Sbjct: 351 LLLVNN--------IVLVVSAAMILLGTLY-PLVLDALTGAKLSVGPPYFNALFLPLMAL 401 Query: 406 LLTLIIIFLINSWK----------LIFIFLGIIIIGGIRGFPE-----IFLA---LYFFI 447 L+ +I + +I WK L + + +++ I F LA L F++ Sbjct: 402 LMAVISVGVIVRWKDTPLNWLGRMLAPVLVASVVLALIATFVHGDFNWAVLAVCLLAFWV 461 Query: 448 YL--------------LLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFS 493 L LL L + + + + H F L ++L ++ E L + Sbjct: 462 VLAGVRDILDKTRHKGLLKGLPSLGRSYWGMQIAHLGFAMCALGVVLTSLGSYERDLRMA 521 Query: 494 IGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLY 553 G ++ L + F H N++S G + D E VL EKR Y Sbjct: 522 PGDSVELG-GYRFQFDGAVHHEGPNFISDKGTVRVFD------GERQIKVLHPEKRLYTV 574 Query: 554 QSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 Q T++ I D+++ LG+ + W R+ PF+ W WLG + + Sbjct: 575 QQATMTEAGIDAGFTRDLFVALGEPLEQGAWAVRVHIKPFVRWIWLGALLM 625
ref|ZP_01442023.1| Cytochrome c biogenesis factor [Pelagibaca bermudensis HTCC2601] gb|EAU47839.1| Cytochrome c biogenesis factor [Roseovarius sp. HTCC2601] (666 aa) Score: 184 bits (467), Expect: 1.32416e-43 Length: 593, Idn/Pos/Gap = 155/260/71 (26%/43%/11%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 ++SDF++ VVE S +P LYK+ W ++EGSL L + L ++ + +F + + Sbjct: 62 IVSDFTVRNVVENSHSLKPMLYKVAGTWGSHEGSLLL-WILILAVFGAGVAWFGSNIPAE 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPLI 184 K +I ++ FLS LLL F+ F L+GN+LN LLQD+ + +HPPL+ Sbjct: 121 TKARTLSVQAWI--SVGFLSF-LLLTSNPFERVFP-PPLDGNDLNPLLQDMGLAMHPPLL 176 Query: 185 YISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELGWG 243 Y Y +SI+FS + L+ + +R L W + I LGS WAY ELGWG Sbjct: 177 YFGYVGFSIVFSFAVAALLEGRVDPAWARWVRPWTLAAWVSLTAGIALGSWWAYYELGWG 236 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE +S +PWLL ALLHS ++ K + ++ L + + + ++G +VRSG Sbjct: 237 GWWFWDPVENVSFMPWLLGTALLHSAIVTEKRDAFKSWTILLAILTFSLSLLGTFIVRSG 296 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIF--- 360 LL SVH F P + L V I + + Y + + + + Sbjct: 297 LLTSVHAFAVDPERGVYILGLLAVSIGGSLAL----YAWRAPEMEPGGLFRPISREAGLL 352 Query: 361 ---LLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLIN- 416 L++ +LF +P +++ + + FFN FI ++L L++ + Sbjct: 353 VNNLILAAATGTVLFGTLYPLILEAITGDKISVGPPFFNAA---FIPMMLALVVFMGLGP 409 Query: 417 --SWK--------------LIFIFLGIIII------GGIRGFPEIFLALY--------FF 446 SWK ++ F+ + G I + I A + + Sbjct: 410 FLSWKRADIAGLLDRIRFVVVLAFIAALAAWYLLNGGPIMAYLAILGAAWLLFATLREWA 469 Query: 447 IYLLLFTLIL---------IIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 + + LF + L + + + H +M+ ++ T + E I+ F+ T Sbjct: 470 LRIRLFEVPLAESARRARNLPRASHGMTLAHAGVAVLMMGMIGSTGWKSEEIV-FAAPGT 528 Query: 498 LLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLI 557 + F I F + NY++ G ++ + LF E+R+Y Sbjct: 529 EVTIAGFDITFEGATQVQGPNYIADRGTLVVRRDG------ELVTTLFPERRYYPVAESQ 582 Query: 558 NTKSIIYTNLMSDVYILLGDG-----NFENGWYSRILFMPFISWFWLGGIFLL 605 T+S I + L D+Y + N W RIL+ P ++ W+G I L+ Sbjct: 583 TTESAIRSTLAGDLYTSIATPASDQVNNAGAWTLRILYEPLVNLIWIGSILLV 635
ref|ZP_09085547.1| cytochrome C-type biogenesis protein CcmF [Mesorhizobium amorphae CCNWGS0123] gb|EHH13841.1| cytochrome C-type biogenesis protein CcmF [Mesorhizobium amorphae CCNWGS0123] (660 aa) Score: 184 bits (467), Expect: 1.34644e-43 Length: 595, Idn/Pos/Gap = 158/251/67 (26%/42%/11%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 SDFS+ V E S QP +YK+ W N+EGS+ L +++ TF + + Sbjct: 63 SDFSVASVWENSHSLQPLIYKITGTWGNHEGSMLL-----WVLILTFFGALVAAFGSNLP 117 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFF--FNFTVLEGNELNFLLQDINILIHPPLI 184 T NV + I + L I + F N +EG +LN +LQD+ + IHPPL+ Sbjct: 118 ATLKANVLAVQGAIG--AAFFLFILATSNPFTRLNPAPIEGRDLNPVLQDLGLAIHPPLL 175 Query: 185 YISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELGW 242 Y+ Y +SI FS S LI + + + +R L+ W + I +GS WAY ELGW Sbjct: 176 YLGYVGFSICFSFSVAALI-EGRIDASWARWVRPWTLVAWMFLTGGIAMGSYWAYYELGW 234 Query: 243 GGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRS 302 GGFWFWD VE S +PWL ALLHS ++ K +++ +L L + + + ++G LVRS Sbjct: 235 GGFWFWDPVENASFMPWLAGTALLHSAIVMEKRSALKIWTLLLAILTFSLSLLGTFLVRS 294 Query: 303 GLLQSVHTFVNSPN---FLIIFLYFFLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYI 359 G+L SVH F P F++ L F+ L + + T ++ V Sbjct: 295 GVLTSVHAFATDPTRGVFILCILTLFIGGSLALFALRASRLTAGGLFHPISREGALVLNN 354 Query: 360 FLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLIN--- 416 L L+ LY P ++ + FF+ L F ++L L+ I Sbjct: 355 LFLTTATATVLVGTLY-PLALEAVTGGKISVGAPFFD---LTFGPLMLPLLAIVPFGPLL 410 Query: 417 SWKLIFIFLG------------------IIIIGGIRGFPEIFLALYFFIYLLLFTLILII 458 +WK +F ++ + G F + + L ++ T L + Sbjct: 411 AWKRGDVFAAAQRLMAAFAAALAAMLVTVLFVDGASVFAALGVGLAVWLVCGALT-DLAV 469 Query: 459 KQKFSFIV--------------------YHFNFFFIMLSLLLITIYGEEFILNFSIGKTL 498 K F + H +L ++ +G E IL+ G+T+ Sbjct: 470 KSGFGSVTPAIMLRRFAGLPRSVFGTALAHLGLGLTLLGIVGTLSFGTEKILSMHAGETV 529 Query: 499 LLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 L+ N + F L NY G F++ N + + S KRF+ + Sbjct: 530 ELSGN-TLRFEGLYPALGPNYSEDRGRFVVIGADG-----NAKGEISSAKRFFPVRQTTT 583 Query: 559 TKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLLDSIIFSLF 613 T+S I T S +Y+ LGD + R+ + P ++ W G + ++ SL Sbjct: 584 TESGIRTIGFSQLYLSLGDEGNDGSVVVRLWWKPLVTLIWGGALVMMAGAAMSLM 638
ref|ZP_08725728.1| Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M21621] gb|EGT80429.1| Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M21621] (648 aa) Score: 184 bits (467), Expect: 1.35772e-43 Length: 589, Idn/Pos/Gap = 155/267/74 (26%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ +VV S+ P Y+L +W ++EGSL L + + + + + L+ Sbjct: 63 VNDFSVQYVVNNSNTALPIYYRLSAVWGSHEGSLLL--------WIWLLAVWSSAVALLS 114 Query: 126 KLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFT--VLEGNELNFLLQDINILIHP 181 K V +L + +S+ +L +F F F ++G ELN +LQD+ ++ HP Sbjct: 115 KHLPQEAVARVLGIMGIISVGFVLFVLFTSNPFTRTFPDFPVDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 LL+ L + F P + K ++ FF+++ L+ + L+ I Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 415 INSWKL---------IFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILII------- 458 + W+ + I + +++I G P FL + +L +++ +I Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMVIAGF-ALP-YFLQDKITVSSVLGSMMTVIIALLALY 468 Query: 459 --KQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILNFSIGKTLLLN- 501 +Q+ + H FF+ + L +T++G F NFS+ + + + Sbjct: 469 ELQQRAT----HRESFFVGVRKLSRSHWGMMLAHLGVAMTVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFAGVTDANGPNYVGGKAQIDISKDGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
emb|CCF18645.1| Cytochrome c-type biogenesis protein cycK [Rhizobium sp.] (662 aa) Score: 184 bits (466), Expect: 1.3691e-43 Length: 585, Idn/Pos/Gap = 156/254/64 (26%/43%/10%) Query: 67 SDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIVK 126 SDFS+ V E S P +YK +W N+EGS+ L + L + + + +F L Sbjct: 64 SDFSVKNVWENSHSMMPLVYKFSGVWGNHEGSMLL-WLLILVFFSALVAFFGRNL----P 118 Query: 127 LTFFYNVYFILFNISFLSLTLLLIFLRFDFF-FNFTVLEGNELNFLLQDINILIHPPLIY 185 T NV + I+ + TL ++ F + EG +LN +LQD + +HPPL+Y Sbjct: 119 DTLHANVLAVQGWIA-TAFTLFILLTSNPFARLSPAPAEGQDLNPILQDPGLAVHPPLLY 177 Query: 186 ISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRWAYTELGWG 243 + Y +S+ FS + LI + + + +R L W + I +GS WAY ELGWG Sbjct: 178 LGYVGFSVCFSFAVAALI-EGRIDAAWARWVRPWTLAAWTFLTAGIAMGSYWAYYELGWG 236 Query: 244 GFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVRSG 303 G+WFWD VE S +PWL ALLHS L+ K +++ ++ L + + + ++G LVRSG Sbjct: 237 GWWFWDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAIMTFSLSLLGTFLVRSG 296 Query: 304 LLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYFTSIFDLNNHYNFVY 357 +L SVH F P I L ++FI F +LK F I + + V Sbjct: 297 VLTSVHAFATDPTRGIFILAILMLFIGGAFALFAWRAPMLKSGGLFAPI---SREGSLVL 353 Query: 358 YIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLINS 417 +L + L+ LY P +++ + FFN L + LL + + + Sbjct: 354 NNLILTVATATVLIGTLY-PLVLETLTGEKISVGAPFFNMTFGLLMIPLLIAVPFGPMLA 412 Query: 418 WK---------LIFIFLGIIIIGGI------RGFP------------EIFLALYFFIYLL 450 WK +++ G+ ++ G+ G P +F AL Y Sbjct: 413 WKRGDLLAALQRLYVAAGLALVAGLTLYYIENGGPVMAVFGLAIAFWGMFGALADLWYRA 472 Query: 451 LF----------TLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLL 500 F L+ + + F + HF +L ++++T Y E ++ G Sbjct: 473 NFGKLPFNVAWRRLVGLPRSAFGTALAHFGLGVTVLGIVMVTTYETETVVEMKQGMAAEA 532 Query: 501 NDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTK 560 + ++F + NY G+F I+ + +S KR Y + + T+ Sbjct: 533 G-GYSLVFDGMREAVGPNYTEEQGHFTISQGG------VVVADTWSSKRLYTARRMPTTE 585 Query: 561 SIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFLL 605 + I T S +Y+ LGD G RI + PFI W G + ++ Sbjct: 586 AGIVTFGFSQLYVSLGDPIAGGGMVVRIWWKPFILCIWGGSLIMM 630
ref|ZP_12492035.1| Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M21639] gb|EGT80229.1| Cytochrome c-type biogenesis protein CcmF [Haemophilus haemolyticus M21639] (648 aa) Score: 184 bits (466), Expect: 1.39214e-43 Length: 589, Idn/Pos/Gap = 155/267/74 (26%/45%/12%) Query: 66 LSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLIV 125 ++DFS+ +VV S+ P Y+L +W ++EGSL L + + + + + L+ Sbjct: 63 VNDFSVQYVVNNSNTALPIYYRLSAVWGSHEGSLLL--------WIWLLAVWSSAVALLS 114 Query: 126 KLTFFYNVYFILFNISFLSLTLLL--IFLRFDFFFNFT--VLEGNELNFLLQDINILIHP 181 K V +L + +S+ +L +F F F ++G ELN +LQD+ ++ HP Sbjct: 115 KHLPQEAVARVLGIMGIISVGFVLFVLFTSNPFTRTFPDFPVDGKELNPMLQDVGLIFHP 174 Query: 182 PLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTEL 240 PL+Y+ Y +S+ F+ + L+ K R L W + I+LGS WAY EL Sbjct: 175 PLLYMGYVGFSVAFAFAIASLMTGKLDSAWARWSRPWTLAAWVFLTLGIVLGSWWAYYEL 234 Query: 241 GWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILV 300 GWGG+WFWD VE S +PWL AL+HSL + K + ++ L + + + ++G LV Sbjct: 235 GWGGWWFWDPVENSSFMPWLAGTALIHSLSVTEKRGSFKAWTVLLAILAFSLCLLGTFLV 294 Query: 301 RSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS-IFDLNNHYNFVYYI 359 RSG+L SVH F + P + + L ++ ++I L Y Y S I +N + Sbjct: 295 RSGILVSVHAFASDPTRGL----YILAYLVVVIGGSLALYAYKGSQIRSRDNAERYSRES 350 Query: 360 FLLVILYFLYLLFVLYF-----PFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFL 414 LL+ L + F P + K ++ FF+++ L+ + L+ I Sbjct: 351 MLLLNNILLMTALCVVFLGTLLPLVHKQVGLGSISIGAPFFDQMFLIIMTPFALLLGIGP 410 Query: 415 INSWKL---------IFIFLGIIIIGGIRGFPEIFLALYFFIYLLLFTLILII------- 458 + W+ + I + +++I G P FL + +L +++ +I Sbjct: 411 LVKWRRDQFSAIRTPVVISVFVMVIAGF-ALP-YFLQDKITVSSVLGSMMTVIIALLALY 468 Query: 459 --KQKFSFIVYHFNFFFIMLSLL--------------LITIYGEEFILNFSIGKTLLLN- 501 +Q+ + H FF+ + L +T++G F NFS+ + + + Sbjct: 469 ELQQRAT----HRELFFVGVRKLSRSHWGMMLAHLGVAMTVWGIAFSQNFSVERDVRMKV 524 Query: 502 ------DNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQS 555 + F + NY+ I+ P + LF+EKRFY Sbjct: 525 GESAQIGRYDFKFTGVTDENGPNYIGGKAQIDISKDGQP------EASLFAEKRFYTVSR 578 Query: 556 LINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y+ LG+ +N W R+ + PFI W W+GG+F+ Sbjct: 579 MSMTEAAIAGGLTRDLYVALGEKLEDNSWALRLYYKPFIRWIWIGGLFM 627
ref|ZP_06353454.1| cytochrome c-type biogenesis protein CcmF [Citrobacter youngae ATCC 29220] gb|EFE09508.1| cytochrome c-type biogenesis protein CcmF [Citrobacter youngae ATCC 29220] (651 aa) Score: 184 bits (466), Expect: 1.39214e-43 Length: 652, Idn/Pos/Gap = 164/292/73 (25%/44%/11%) Query: 1 MFGYVLHFLLIFIFIYSCNFFFLDSFYKYKKVTTLLEIVHHYYFY-FNYIYNIIIIIIWL 59 M + HFLL SC ++ ++ T ++ + F F I +I+++ Sbjct: 1 MIPEIGHFLLCLALGISCLLGLYPTWGAMRQDTRMMALAKPLSFAMFAAILGSFLILVY- 59 Query: 60 IGIILLLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFIN 119 +++DF++ +V S+ P Y++ W +EGSL L +++ + + + Sbjct: 60 ---AFVVNDFTVQYVASNSNTLLPVWYRVAATWGAHEGSLLL-----WVLLMSGWTFAVA 111 Query: 120 KLTLIVKLTFFYNVYFILFNISFLSLTLLLI----FLRF--DFFFNFTVLEGNELNFLLQ 173 L+ + L V ++ ISF L +L+ F+R DF +EG +LN +LQ Sbjct: 112 ALSRNIPLEASSRVLAVMGMISFCFLVFILLTSNPFVRTLPDF-----PIEGRDLNPMLQ 166 Query: 174 DINILIHPPLIYISYASYSIIFSISFTILII-KCKFYVLYILRFLNLIGWFIASFSILLG 232 DI ++ HPP++Y+ Y +S+ F+ + L+ + R L W + I+LG Sbjct: 167 DIGLIFHPPMLYMGYVGFSVAFAFAIASLMTGRLDSAWARWSRPWTLAAWSFLTVGIVLG 226 Query: 233 SRWAYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFV 292 S WAY ELGWGG+WFWD VE SL+PWL AL+HSL + K + ++ L + + + Sbjct: 227 SAWAYYELGWGGWWFWDPVENASLMPWLAGTALIHSLSVTEKRGSFKSWTVLLAILAFSL 286 Query: 293 IIIGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTS--IFDLN 350 ++G LVRSG+L SVH+F + P + L ++ I +++ K S +L Sbjct: 287 CLLGTFLVRSGVLISVHSFASDPTRGLFILALLVITIGGSLLLFAVKGGKVRSRVRHELW 346 Query: 351 NHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLI 410 + + + +L+I L +L P + K ++ FFN LFI +++ Sbjct: 347 SRESLLLGNNVLLIAAMLVVLLGTLLPLIHKLLGLGSISIGEPFFNS---LFIALMIPFS 403 Query: 411 IIFLINS---WK-----------LIFIFLGIIIIGGIRGFPEIFLALYFFIYLL--LFTL 454 ++ I W+ LI + I++ + + + + LL L+ L Sbjct: 404 LLLGIGPLVRWRRDEFHKLRKRLLIAALVSIVLAVALPWLMQDHIKAMTVLGLLMSLWAL 463 Query: 455 ILIIKQKFSFIVYHFNFFFIMLSL-------------LLITIYGEEFILNFSIGKTLLLN 501 +L + + F+ + L L++T+ G F N+SI + + + Sbjct: 464 VLTVMEVVERATDRHTFWRGLTRLGRSHWGMVAGHVGLVVTVIGIAFSQNYSIERDVRMK 523 Query: 502 DNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNV--LFSEKRFYL 552 + +FRD+ I NY +G + D +N ++V L +EKR Y Sbjct: 524 PGDSVDIHQYHFVFRDVQDITGPNY---FGGEAVIDVS-----QNGRHVSTLRAEKRVYS 575 Query: 553 YQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 + T++ I L D+Y LG+ + W R+ + PF+ W W GG+ + Sbjct: 576 SSRMEMTEAAIDGGLARDLYAALGEELNDGSWAVRLYYKPFVRWIWFGGMLM 627
ref|ZP_12357269.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri VA-6] ref|ZP_12377813.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-671] gb|EGJ85604.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri K-671] gb|EGK20904.1| cytochrome c-type biogenesis protein CcmF [Shigella flexneri VA-6] (636 aa) Score: 184 bits (466), Expect: 1.4038e-43 Length: 595, Idn/Pos/Gap = 156/266/91 (26%/44%/15%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 51 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 110 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 111 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 159 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 160 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 218 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 219 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 278 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 279 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 338 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 339 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 398 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 399 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 449 Query: 446 FIYLLLFTLILI-----IKQKFSF---IVYHFNFFFIMLSLLLITIYGEEFILNFSIGKT 497 +I +L + K FS+ + H L +TI G F N+S+ + Sbjct: 450 WIAVLATAEAALRISRGTKTTFSYWGMVAAHLG--------LAVTIVGIAFSQNYSVERD 501 Query: 498 LLLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRF 550 + + + FRD+ + N+ +T P + VL++EKR+ Sbjct: 502 VRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKP------ETVLYAEKRY 555 Query: 551 YLYQSLINTKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 Y + T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 556 YNTAGSMMTEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 609
ref|YP_004379670.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas mendocina NK-01] gb|AEB57918.1| cytochrome c-type biogenesis protein CcmF [Pseudomonas mendocina NK-01] (657 aa) Score: 184 bits (466), Expect: 1.41556e-43 Length: 596, Idn/Pos/Gap = 151/259/88 (25%/43%/14%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFINYFI 118 ++ DFS+ +V S+ P YK +W +EGSL L G+ I+ + + Sbjct: 62 MVDDFSVAYVANNSNSALPWYYKFSAVWGAHEGSLLLWALILAGWTFAVAIFSRHLPEEM 121 Query: 119 NKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINIL 178 L ++ + +V F+LF L++ F+ + ++G +LN LLQD ++ Sbjct: 122 --LARVLAVMGMISVGFLLF--------LIVTSNPFERLLPNSPVDGRDLNPLLQDFGLI 171 Query: 179 IHPPLIYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWA 236 +HPP++Y+ Y +S+ F+ ++ K + R ++ W I LGS WA Sbjct: 172 VHPPMLYMGYVGFSVAFAF-AIAALLGGKLDAAWARWSRPWTIVAWAFLGIGIALGSWWA 230 Query: 237 YTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIG 296 Y ELGWGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L +A + + ++G Sbjct: 231 YYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLG 290 Query: 297 IILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFI------FILIVILLKKYTYF-----TS 345 LVRSG+L SVH F P + L F LV + F + +++ F + Sbjct: 291 TFLVRSGVLTSVHAFATDPERGVFILAFLLVVVGGSLTLFAVRAPVVRSQVGFGLWSRET 350 Query: 346 IFDLNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGI 405 + +NN +LV+ + LL LY P ++ L +FN + L + + Sbjct: 351 LLLVNN--------IVLVVSAAMILLGTLY-PLVLDALTGAKLSVGPPYFNALFLPLMAL 401 Query: 406 LLTLIIIFLINSWK-LIFIFLGI------------------------------------I 428 L+ +I + ++ WK +LG + Sbjct: 402 LMAVISVGVLVRWKDTPLKWLGSMLTPVLVASVVLAVAATYLHGDFHWAVLAVCLLAFWV 461 Query: 429 IIGGIRGFPEIFLALYFFIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEF 488 ++GG+R +I L+ L + + + + H F L ++L ++ E Sbjct: 462 VLGGVR---DILDKTRH--KGLIKGLPSLTRSYWGMQMAHLGFAVCALGVVLTSLGSYER 516 Query: 489 ILNFSIGKTLLLNDNFIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEK 548 L + G+++ L + F H N++S G + D E VL EK Sbjct: 517 DLRMAPGESVELA-GYRFQFDGAVHHEGPNFISDKGTVRVFD------GERQIKVLHPEK 569 Query: 549 RFYLYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL 604 R Y Q T++ I D+++ LG+ + W RI PF+ W WLGG+ + Sbjct: 570 RLYTVQQSTMTEAGIDAGFTRDLFVALGEPLEQGAWAVRIHIKPFVRWIWLGGLLM 625
ref|YP_002871400.1| cytochrome C biogenesis protein [Pseudomonas fluorescens SBW25] emb|CAY48010.1| cytochrome C biogenesis protein [Pseudomonas fluorescens SBW25] (662 aa) Score: 184 bits (466), Expect: 1.42742e-43 Length: 575, Idn/Pos/Gap = 149/262/58 (25%/45%/10%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTF-INYFINKLTL 123 + DFS+ +V S+ P YK +W +EGSL L + + +TF ++ F +L Sbjct: 67 MTDDFSVAYVANNSNSALPWYYKFSAVWGAHEGSLLL--WALILGGWTFAVSVFSRQLPQ 124 Query: 124 IVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINILIHPPL 183 ++ + I +I FL L L++ F ++G++LN LLQDI +++HPP+ Sbjct: 125 VMLARVLAVMGMI--SIGFL-LFLIMTSNPFTRILPQIPVDGHDLNPLLQDIGLIVHPPM 181 Query: 184 IYISYASYSIIFSISFTILIIKCKFYVLYIL--RFLNLIGWFIASFSILLGSRWAYTELG 241 +Y+ Y +S+ F+ ++ + + R ++ W I LGS WAY ELG Sbjct: 182 LYMGYVGFSVAFAF-AIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG 240 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE S +PWL+ AL+HSL + K + + ++ L +A + + ++G LVR Sbjct: 241 WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVR 300 Query: 302 SGLLQSVHTFVNSPN---FLIIFLYFFL---VFIFILIVILLKKYTYFTSIFDLNNHYNF 355 SG+L SVH F + P F++IFL F + + +F L ++K F +L + Sbjct: 301 SGVLTSVHAFASDPERGVFILIFLLFVVGGSLTLFALRAPVVKSQVGF----NLWSRETL 356 Query: 356 VYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKILLLFIGILLTLIIIFLI 415 + L++++ +L +P ++ + L +FN + + +G+L+ ++ + ++ Sbjct: 357 LLGNNLVLVVAASMILLGTLYPLVLDALSGAKLSVGPPYFNALFIPLMGLLMVVMAVGML 416 Query: 416 NSWK----------LIFIFLGIIIIGGIRGFP----------EIFLALYFFIYL------ 449 WK L+ + LG + + I GF LA + + Sbjct: 417 VRWKDTPVKWLAGMLMPVLLGSVALAVIAGFAYGDFNWAVLATFLLAAWVLLAGVRDIFD 476 Query: 450 ------LLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDN 503 L+ L + + + + H L ++L + E L + G+++ L Sbjct: 477 KTRHKGLVKGLPTLTRSYWGMQIAHIGIAVCALGVVLSSQNSAERDLRLAPGESMDLA-G 535 Query: 504 FIIIFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLINTKSII 563 + IF H N+ S G + + VL EKR Y QS + T++ I Sbjct: 536 YHFIFEGAKHFEGPNFTSDKGTVRVVRNGKEIA------VLHPEKRLYTVQSSMMTEAGI 589 Query: 564 YTNLMSDVYILLGDGNFENGWYSRILFMPFISWFW 598 D+Y+ LG+ E W R+ PF+ W W Sbjct: 590 DAGFTRDLYVALGEPLGEGAWAVRVHVKPFVRWIW 624
ref|YP_402550.1| cytochrome c-type biogenesis protein [Shigella dysenteriae Sd197] ref|ZP_07681250.1| cytochrome c-type biogenesis protein CcmF [Shigella dysenteriae 1617] gb|ABB61059.1| cytochrome c-type biogenesis protein [Shigella dysenteriae Sd197] gb|EFP71024.1| cytochrome c-type biogenesis protein CcmF [Shigella dysenteriae 1617] (647 aa) Score: 184 bits (466), Expect: 1.43938e-43 Length: 587, Idn/Pos/Gap = 152/265/75 (25%/45%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R + W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTMAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRLRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + IFRD+ + N+ +T P + VL++EKR+Y + Sbjct: 521 VDIHEYRFIFRDVKEVTGLNWRGGVATIGVTRDGKP------ETVLYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|ZP_11522049.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli RN587/1] ref|ZP_12068908.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3003] ref|ZP_18669740.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli ARS4.2123] gb|EFZ73373.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli RN587/1] gb|EII87667.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli 3003] gb|EKI27146.1| cytochrome c-type biogenesis protein CcmF [Escherichia coli ARS4.2123] (647 aa) Score: 184 bits (466), Expect: 1.5007e-43 Length: 587, Idn/Pos/Gap = 151/264/75 (25%/44%/12%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFL------GYFLQFIIYFTFIN-YF 117 +++DF++ +V S+ P Y++ W +EGSL L G+ I+ I Sbjct: 62 VVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDI 121 Query: 118 INKLTLIVKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFTVLEGNELNFLLQDINI 177 + ++ I+ + + FILF + S TL NF + EG +LN LLQD + Sbjct: 122 VARVLAIMGMVSVGFLLFILFTSNPFSRTLP----------NFPI-EGRDLNPLLQDPGL 170 Query: 178 LIHPPLIYISYASYSIIFSISFTILIIKCKFYVLYI--LRFLNLIGWFIASFSILLGSRW 235 + HPPL+Y+ Y +S+ F+ + L+ + Y R L W + I+LGS W Sbjct: 171 IFHPPLLYMGYVGFSVAFAFAIASLL-SGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAW 229 Query: 236 AYTELGWGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIII 295 AY ELGWGG+WFWD VE S +PWL+ AL+HSL + + + +L L ++ + + ++ Sbjct: 230 AYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLL 289 Query: 296 GIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSIFD--LNNHY 353 G LVRSG+L SVH F + P + L F ++ I +++ + S + L + Sbjct: 290 GTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRE 349 Query: 354 NFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIG 404 + + +L++ L +L P + K ++ FFN + LLL +G Sbjct: 350 SLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVG 409 Query: 405 ILLT-----------LIIIFLINSWKLIFIF--------LGIIIIGGIRGFPEIFLALYF 445 L+ L+II I++ L + + + ++G LA+ Sbjct: 410 PLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLG---------LAMAC 460 Query: 446 FIYLLLFTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTLLLNDNFI 505 +I +L + + + + + L +TI G F N+S+ + + + Sbjct: 461 WIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDS 520 Query: 506 I-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFYLYQSLIN 558 + FRD+ + N+ +T P + V+++EKR+Y + Sbjct: 521 VDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKP------ETVMYAEKRYYNTAGSMM 574 Query: 559 TKSIIYTNLMSDVYILLGDGNFENG-WYSRILFMPFISWFWLGGIFL 604 T++ I + D+Y LG+ ENG W R+ + PF+ W W GG+ + Sbjct: 575 TEAAIDGGITRDLYAALGE-ELENGAWAVRLYYKPFVRWIWAGGLMM 620
ref|YP_005227355.1| cytochrome c-type biogenesis protein [Klebsiella pneumoniae subsp. pneumoniae HS11286] gb|AEW61753.1| cytochrome c-type biogenesis protein [Klebsiella pneumoniae subsp. pneumoniae HS11286] (650 aa) Score: 184 bits (466), Expect: 1.53874e-43 Length: 613, Idn/Pos/Gap = 160/271/84 (26%/44%/13%) Query: 65 LLSDFSILFVVELSSVNQPSLYKLITLWSNNEGSLFLGYFLQFIIYFTFINYFINKLTLI 124 +++DF++ +V E S+ P Y++ W +EGSL L L + F + F +++L Sbjct: 62 VVNDFTVRYVAENSNSALPVWYRVAATWGAHEGSLLLWVLLLSVWTFA-VAIFSRRMSLD 120 Query: 125 VKLTFFYNVYFILFNISFLSLTLLLIFLRFDFFFNFT--VLEGNELNFLLQDINILIHPP 182 + I F FL L ++F F ++G +LN LLQDI ++ HPP Sbjct: 121 AVARVLAVMGMIAFG--FL---LFILFTSNPFSRGLPQYPIDGRDLNPLLQDIGMIFHPP 175 Query: 183 LIYISYASYSIIFSIS-FTILIIKCKFYVLYILRFLNLIGWFIASFSILLGSRWAYTELG 241 ++Y+ Y +S+ F+ + ++L + R W + I+LGS WAY ELG Sbjct: 176 ILYMGYVGFSVAFAFAIASLLAGRLDTAWARWSRPWTQAAWMFLTLGIVLGSAWAYYELG 235 Query: 242 WGGFWFWDSVEIISLLPWLLSLALLHSLLLNLKFCIIRLDSLFLGMAIYFVIIIGIILVR 301 WGG+WFWD VE S +PWL+ ALLHSL + K R ++ L +A + + ++G LVR Sbjct: 236 WGGWWFWDPVENASFMPWLVGTALLHSLAVTEKRGSFRAWTVLLAIAAFSLCLLGTFLVR 295 Query: 302 SGLLQSVHTFVNSPNFLIIFLYFFLVFI-FILIVILLKKYTYFTSI-FDLNNHYNFVYYI 359 SG+L SVH F + P+ + L +V I L++ LK + L + +F+ Sbjct: 296 SGVLVSVHAFASDPSRGLFILVLLIVAIGGSLLLYALKGGRVRARVEHTLWSRESFLLGN 355 Query: 360 FLLVILYFLYLLFVLYFPFLIKCYNDNALLFSFGFFNKI---------LLLFIGILL--- 407 +L++ L +L P + K ++ FFN + LLL +G L+ Sbjct: 356 NILLMAAMLVVLLGTLLPLVHKELGLGSISIGEPFFNTMFTALMAPFALLLGLGPLIRWR 415 Query: 408 ---------TLIIIFLIN-------SWKLIFIFLGIIIIGGIRGFPEIFLALYFFIYLLL 451 LII L+ W L + +IG + +AL+ I+ LL Sbjct: 416 RDDVARQIKRLIIALLVTLSLSLALPWLLQDRITAMAVIG-------LMMALWVLIFALL 468 Query: 452 -------------FTLILIIKQKFSFIVYHFNFFFIMLSLLLITIYGEEFILNFSIGKTL 498 L + + ++ ++ H + +T+ G F N+S+ + + Sbjct: 469 EVHERATHRHGFWRGLRALTRSQWGMVLGHVG--------VAVTVIGITFSQNYSVERDV 520 Query: 499 LLNDNFII-------IFRDLNHIWSTNYLSTYGNFLITDFHNPMCYENIQNVLFSEKRFY 551 + I +F + +I N+ G +T P + L++EKRFY Sbjct: 521 RMRPGDSIDIHRYHFVFNGVRNIVGPNWTGGEGIIAVTRNGRP------EATLYAEKRFY 574 Query: 552 LYQSLINTKSIIYTNLMSDVYILLGDGNFENGWYSRILFMPFISWFWLGGIFL----LDS 607 ++ T++ I L D+Y LG+ + W R+ + PF+ W W GG+ + L Sbjct: 575 TASRMMMTEAAISGGLTRDLYAALGEELSDGSWAVRLYYKPFVRWIWYGGVLMALGGLCC 634 Query: 608 IIFSLFRCIKNFQ 620 ++ +R K Q Sbjct: 635 MLDPRYRMRKKLQ 647